Mercurial > repos > iuc > quast

comparison test-data/test5.tab @ 14:3061c8b029e5 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit b4d6989e1e185120ce470df5c2b0d93330d5e124
author iuc
date Fri, 05 Aug 2022 15:21:27 +0000
parents 45924fa8d8c5
children
comparison
equal deleted inserted replaced
13:675488238c96 14:3061c8b029e5
9 Reference length 6650 6650 9 Reference length 6650 6650
10 GC (%) 51.28 52.00 10 GC (%) 51.28 52.00
11 Reference GC (%) 52.00 52.00 11 Reference GC (%) 52.00 52.00
12 N50 3980 6650 12 N50 3980 6650
13 NG50 3980 6650 13 NG50 3980 6650
14 N75 1610 6650 14 N90 1120 6650
15 NG75 1610 6650 15 NG90 1120 6650
16 auN 2934.0 6650.0
17 auNG 2960.4 6650.0
16 L50 1 1 18 L50 1 1
17 LG50 1 1 19 LG50 1 1
18 L75 2 1 20 L90 3 1
19 LG75 2 1 21 LG90 3 1
20 # total reads 331 331 22 # total reads 330 330
21 # left 0 0 23 # left 0 0
22 # right 0 0 24 # right 0 0
23 Mapped (%) 2.72 2.42 25 Mapped (%) 2.73 2.42
24 Reference mapped (%) 2.42 2.42 26 Reference mapped (%) 2.42 2.42
25 Properly paired (%) 0.0 0.0 27 Properly paired (%) 0.0 0.0
26 Reference properly paired (%) 0.0 0.0 28 Reference properly paired (%) 0.0 0.0
27 Avg. coverage depth 0 1 29 Avg. coverage depth 0 1
28 Reference avg. coverage depth 1 1 30 Reference avg. coverage depth 1 1
44 # indels per 100 kbp 0.00 0.00 46 # indels per 100 kbp 0.00 0.00
45 Largest alignment 2030 6650 47 Largest alignment 2030 6650
46 Total aligned length 4760 6650 48 Total aligned length 4760 6650
47 NA50 1610 6650 49 NA50 1610 6650
48 NGA50 1610 6650 50 NGA50 1610 6650
49 NA75 - 6650 51 NA90 - 6650
50 NGA75 - 6650 52 NGA90 - 6650
53 auNA 1187.4 6650.0
54 auNGA 1198.1 6650.0
51 LA50 2 1 55 LA50 2 1
52 LGA50 2 1 56 LGA50 2 1
53 LA75 - 1 57 LA90 - 1
54 LGA75 - 1 58 LGA90 - 1