Mercurial > repos > iuc > quast
comparison test-data/test5.tab @ 14:3061c8b029e5 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit b4d6989e1e185120ce470df5c2b0d93330d5e124
author | iuc |
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date | Fri, 05 Aug 2022 15:21:27 +0000 |
parents | 45924fa8d8c5 |
children |
comparison
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13:675488238c96 | 14:3061c8b029e5 |
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9 Reference length 6650 6650 | 9 Reference length 6650 6650 |
10 GC (%) 51.28 52.00 | 10 GC (%) 51.28 52.00 |
11 Reference GC (%) 52.00 52.00 | 11 Reference GC (%) 52.00 52.00 |
12 N50 3980 6650 | 12 N50 3980 6650 |
13 NG50 3980 6650 | 13 NG50 3980 6650 |
14 N75 1610 6650 | 14 N90 1120 6650 |
15 NG75 1610 6650 | 15 NG90 1120 6650 |
16 auN 2934.0 6650.0 | |
17 auNG 2960.4 6650.0 | |
16 L50 1 1 | 18 L50 1 1 |
17 LG50 1 1 | 19 LG50 1 1 |
18 L75 2 1 | 20 L90 3 1 |
19 LG75 2 1 | 21 LG90 3 1 |
20 # total reads 331 331 | 22 # total reads 330 330 |
21 # left 0 0 | 23 # left 0 0 |
22 # right 0 0 | 24 # right 0 0 |
23 Mapped (%) 2.72 2.42 | 25 Mapped (%) 2.73 2.42 |
24 Reference mapped (%) 2.42 2.42 | 26 Reference mapped (%) 2.42 2.42 |
25 Properly paired (%) 0.0 0.0 | 27 Properly paired (%) 0.0 0.0 |
26 Reference properly paired (%) 0.0 0.0 | 28 Reference properly paired (%) 0.0 0.0 |
27 Avg. coverage depth 0 1 | 29 Avg. coverage depth 0 1 |
28 Reference avg. coverage depth 1 1 | 30 Reference avg. coverage depth 1 1 |
44 # indels per 100 kbp 0.00 0.00 | 46 # indels per 100 kbp 0.00 0.00 |
45 Largest alignment 2030 6650 | 47 Largest alignment 2030 6650 |
46 Total aligned length 4760 6650 | 48 Total aligned length 4760 6650 |
47 NA50 1610 6650 | 49 NA50 1610 6650 |
48 NGA50 1610 6650 | 50 NGA50 1610 6650 |
49 NA75 - 6650 | 51 NA90 - 6650 |
50 NGA75 - 6650 | 52 NGA90 - 6650 |
53 auNA 1187.4 6650.0 | |
54 auNGA 1198.1 6650.0 | |
51 LA50 2 1 | 55 LA50 2 1 |
52 LGA50 2 1 | 56 LGA50 2 1 |
53 LA75 - 1 | 57 LA90 - 1 |
54 LGA75 - 1 | 58 LGA90 - 1 |