Mercurial > repos > iuc > quast
diff test-data/Quast_report_withref_withgenes.tsv @ 3:6fcbee531de6 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit cd130fcce3254cddb9a3f501f43feaa3f37c1b67
| author | iuc |
|---|---|
| date | Fri, 29 Sep 2017 05:51:26 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/Quast_report_withref_withgenes.tsv Fri Sep 29 05:51:26 2017 -0400 @@ -0,0 +1,38 @@ +Assembly contigs_1_fasta +# contigs (>= 0 bp) 3 +# contigs (>= 1000 bp) 3 +Total length (>= 0 bp) 6710 +Total length (>= 1000 bp) 6710 +# contigs 3 +Largest contig 3980 +Total length 6710 +Reference length 6650 +GC (%) 51.28 +Reference GC (%) 52.00 +N50 3980 +NG50 3980 +N75 1610 +NG75 1610 +L50 1 +LG50 1 +L75 2 +LG75 2 +# misassemblies 0 +# misassembled contigs 0 +Misassembled contigs length 0 +# local misassemblies 0 +# unaligned mis. contigs 0 +# unaligned contigs 0 + 1 part +Unaligned length 1950 +Genome fraction (%) 71.579 +Duplication ratio 1.000 +# N's per 100 kbp 0.00 +# mismatches per 100 kbp 0.00 +# indels per 100 kbp 0.00 +# genes 3 + 3 part +Largest alignment 2030 +Total aligned length 4760 +NA50 1610 +NGA50 1610 +LA50 2 +LGA50 2