Mercurial > repos > iuc > quast
view test-data/Quast_report_withref_withgenes.tsv @ 3:6fcbee531de6 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit cd130fcce3254cddb9a3f501f43feaa3f37c1b67
author | iuc |
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date | Fri, 29 Sep 2017 05:51:26 -0400 |
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Assembly contigs_1_fasta # contigs (>= 0 bp) 3 # contigs (>= 1000 bp) 3 Total length (>= 0 bp) 6710 Total length (>= 1000 bp) 6710 # contigs 3 Largest contig 3980 Total length 6710 Reference length 6650 GC (%) 51.28 Reference GC (%) 52.00 N50 3980 NG50 3980 N75 1610 NG75 1610 L50 1 LG50 1 L75 2 LG75 2 # misassemblies 0 # misassembled contigs 0 Misassembled contigs length 0 # local misassemblies 0 # unaligned mis. contigs 0 # unaligned contigs 0 + 1 part Unaligned length 1950 Genome fraction (%) 71.579 Duplication ratio 1.000 # N's per 100 kbp 0.00 # mismatches per 100 kbp 0.00 # indels per 100 kbp 0.00 # genes 3 + 3 part Largest alignment 2030 Total aligned length 4760 NA50 1610 NGA50 1610 LA50 2 LGA50 2