Mercurial > repos > iuc > repmatch_gff3
changeset 2:d7f1312b3455 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/repmatch_gff3 commit 4eb5632ca7b54134911d40ae94eaf155dc673a71
| author | iuc |
|---|---|
| date | Fri, 13 Jan 2017 10:27:44 -0500 |
| parents | e5c7fffdc078 |
| children | f7608d0363bf |
| files | repmatch_gff3.xml repmatch_gff3_macros.xml repmatch_gff3_util.pyc tool_dependencies.xml |
| diffstat | 4 files changed, 10 insertions(+), 8 deletions(-) [+] |
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--- a/repmatch_gff3.xml Tue Jul 26 06:10:53 2016 -0400 +++ b/repmatch_gff3.xml Fri Jan 13 10:27:44 2017 -0500 @@ -1,10 +1,18 @@ <?xml version="1.0"?> -<tool id="repmatch_gff3" name="RepMatch" version="@WRAPPER_VERSION@.0"> +<tool id="repmatch_gff3" name="RepMatch" version="@WRAPPER_VERSION@.1"> <description>Match paired peaks from two or more replicates</description> <macros> <import>repmatch_gff3_macros.xml</import> </macros> <expand macro="requirements" /> + <stdio> + <!-- Anything other than zero is an error --> + <exit_code range=":-1" /> + <exit_code range="1:" /> + <!-- Check stderr in case the return code has not been set --> + <regex match="Error:" /> + <regex match="Exception:" /> + </stdio> <command> python $__tool_directory__/repmatch_gff3.py #for $i in $input:
--- a/repmatch_gff3_macros.xml Tue Jul 26 06:10:53 2016 -0400 +++ b/repmatch_gff3_macros.xml Fri Jan 13 10:27:44 2017 -0500 @@ -3,7 +3,7 @@ <token name="@WRAPPER_VERSION@">1.0</token> <xml name="requirements"> <requirements> - <requirement type="package" version="2.3.0">anaconda</requirement> + <requirement type="package" version="1.5.3">matplotlib</requirement> </requirements> </xml> <xml name="stdio">
--- a/tool_dependencies.xml Tue Jul 26 06:10:53 2016 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,6 +0,0 @@ -<?xml version="1.0"?> -<tool_dependency> - <package name="anaconda" version="2.3.0"> - <repository changeset_revision="94d978ebbfd4" name="package_anaconda_2_3_0" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> - </package> -</tool_dependency>