Mercurial > repos > iuc > rna_starsolo
view test-data/test-cache/tophat-test/genomeParameters.txt @ 7:e403d27e8f24 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit a8e319862d723654c372a6d71e5de76e052586a9"
author | iuc |
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date | Wed, 05 Aug 2020 09:41:22 -0400 |
parents | e3c94e2933c9 |
children |
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### STAR --runMode genomeGenerate --genomeDir tempstargenomedir --genomeFastaFiles tools/rgrnastar/test-data/tophat_test.fa --genomeSAindexNbases 5 ### GstrandBit 32 versionGenome 2.7.4a genomeType Full genomeFastaFiles tools/rgrnastar/test-data/tophat_test.fa genomeSAindexNbases 5 genomeChrBinNbits 18 genomeSAsparseD 1 genomeTransformType None genomeTransformVCF - sjdbOverhang 0 sjdbFileChrStartEnd - sjdbGTFfile - sjdbGTFchrPrefix - sjdbGTFfeatureExon exon sjdbGTFtagExonParentTranscript transcript_id sjdbGTFtagExonParentGene gene_id sjdbInsertSave Basic genomeFileSizes 262144 5366