Mercurial > repos > iuc > rna_starsolo

view test-data/test-cache/tophat-test/genomeParameters.txt @ 0:e3c94e2933c9 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit 686574b0392e554b75035a9b79bc919dfda9ab97"
author iuc
date Thu, 15 Aug 2019 01:53:49 -0400
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children e403d27e8f24
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### STAR   --runMode genomeGenerate   --genomeDir test-cache/tophat_test/   --genomeFastaFiles tophat_test.fa      --genomeSAindexNbases 5
### GstrandBit 32
versionGenome	2.7.1a
genomeFastaFiles	tophat_test.fa 
genomeSAindexNbases	5
genomeChrBinNbits	18
genomeSAsparseD	1
sjdbOverhang	0
sjdbFileChrStartEnd	- 
sjdbGTFfile	-
sjdbGTFchrPrefix	-
sjdbGTFfeatureExon	exon
sjdbGTFtagExonParentTranscript	transcript_id
sjdbGTFtagExonParentGene	gene_id
sjdbInsertSave	Basic
genomeFileSizes	262144 5366