diff test-data/rnaspades-out1.fa @ 0:0d30fed9628b draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rnaspades commit 9bfb3d0e41daa3990a997b92438b9e56c2b6edbf
author iuc
date Tue, 13 Dec 2016 11:32:10 -0500
parents
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/rnaspades-out1.fa	Tue Dec 13 11:32:10 2016 -0500
@@ -0,0 +1,122 @@
+>NODE_1_length_193_cov_2.51449
+CATCACCAATTGTATTGGACCAATGTGACCTTGTCACTAGAGCTTGCGGGTTGTATTCAT
+CATACTCCCTTAATCCGCAACTACGCAACTGTAAACTCCCGAAACATATATACCGTTTAA
+AATATGATGTAACTGTTACCAAGTTCTTAAGTGATGTACCAGTGGCGACATTGCCCATAG
+ATTTCATAGTTCC
+>NODE_2_length_186_cov_2.1374
+GTTCCAATTTCAATACTGCTCAATAATCCATTGTAGTTCACGACATGTAGAGCATCCAAT
+TTGTTAATAAACTTGAGAATATTGGATCGAATCAACGACAGCATTTTTAGGCTCAATTGT
+TCCTTGACACGTTGTGTTCGCATGTTGAAATGGTTAGTGTTGGTTGTTAGCAGCCAATCA
+GAGATC
+>NODE_3_length_181_cov_3.33333
+TTCATATTGGGCTAACTCATATATGCTGACTCAATAGTTAACTTGACATCTCTGCCTTCA
+TAATCAGATATATAAGCATAATAAATAAATACTCATATTTCTTGATAATTTGTTTAACCA
+CAGATAAATCCTCACTGTAAGCCAGCTTCCAAGTTGACACCCTTACAAAAACCAGGACTC
+A
+>NODE_4_length_178_cov_2.80488
+GCAGTTCGAACAGTGACTTGCTAATAAAACCATTTTTGGAAGCACGAGTAAATTTAAGTG
+TTCAAGAAATACTTCAAATGACCCCTTCACATTACTCGGGAAATATTGTTCATAGGTACA
+ACGATCAATACAGTCCTCATTCTTTCATGGCCAATCGTATGAGTATCTCAGCAACGCG
+>NODE_5_length_156_cov_2.07921
+CATGCCGTTTTACGAGTAACTTTGGTATTCGCCGTAGCCTCCATCATCGGGGTCAACTAC
+CACATCGGGAATGGTCGTATCCTGTGAGTCAGTCGGATCATCATCTTGATGGCCAGGATT
+GTCGTCATCATTGATGGGTCCTGGAAAGGGAATGTC
+>NODE_6_length_153_cov_2
+GTGGGCGTCCTCTCTCATATGAAGCTTCCATTTAAGAGTTGTCTGCACTCACTGTTTAAA
+TTTCTATTGACTTTTTTACCAATGCTTTGTGTGTGTTAGGTTACAACTAAATTCTACCGG
+TTTGCAGATCTGATTATTACAACTTAAGAAAAA
+>NODE_7_length_153_cov_2.42857
+GAACCGCAAGAAGCCTGGGCCGGCGAAATTTTCCCTCCTTCATGAGTCCACACTGAAAGC
+ATTTACACAAGGGTCCTCGACACGAATGCAAAGTTTAATTCTTGAATTCAATAGCTCTCT
+TGCTATCTAACTAAGATGGACTACTTCATATTG
+>NODE_8_length_151_cov_2.125
+TGAGTCCTCCTTTTAGAGGATTATTGTCATAAATCAATTCATTTTCTCGGTATCTTGTTA
+AATCTAAATCCAATGTAGATGTGTATGTTAAGTACTGAGCTGGTACCTCCCGGGTGCAAC
+ACTTAGTTAGATGAAGTTGAGCACGATTATA
+>NODE_9_length_149_cov_2.54255
+AACATAATACACTGGAGCTTCAAACATAGCCAATGTGATTCTAACTCCTTTAAACTCACA
+GTTAATCATAAACAAGGTTTGACATCAATCTAGCTATATCTTTAAGAATGATAAACTTGA
+TGAAGATTAAGAAAAAGGTAATCTGTCGA
+>NODE_10_length_143_cov_2.55682
+GTTTGTTTTTCGCACTTAGGGTGATAGTCCTACGTACAATCTGGCGCAGAAATGAAGTTA
+AGTCTTGCGACCCAGGAACATTTAATCCGCTAGGATTTAGCACAAAGTCAATGGCAGTGC
+AGTTCCCAGGGTTCTTCGCAATT
+>NODE_11_length_137_cov_2.0122
+CCAGCAGCGCCAGACGGGATTCGGGGCTTCCCCCGGTGCCGGTATGTGCACAAAGTATCA
+GGAACGGGACCATGTGCCGGAGACTTTGCCTTCCACAAAGAGGGTGCTTTCTTCCTGTAT
+GATCGACTTGCTTCCAC
+>NODE_12_length_134_cov_2.05063
+CTTCATATGAGAGAGGACGCCCCCGAGCTGCCAGACAGCATTCAAGGGATGGACACGACC
+ACCATGTTCGAGCACGATCATCATCCAGAGAGAATTATCGAGGTGAGTACCGTCAATCAA
+GGAGCGCCTCACAA
+>NODE_13_length_133_cov_3.01282
+ACGACAAACTAGTTTGTCGACATCACTAACCTGTAATGTACTATTGTGGATAACTCCAAG
+CGGGATGGAAAATGTTCTTTGGAAAAGGATAATTACCCAAAGAAAGAATGATGTCCTCTT
+GACTGGATCACGA
+>NODE_14_length_132_cov_2.41558
+GATGAAATTGCTGGCTGTACTCTTACATGTGTAAACAAGATTGTCGTGAGGATGTACATG
+ATCATTTATGGTAGTTTTAAAAGCCTGGTGTCTTGATGAATCATGCACCAGCAGTTCTAC
+GATCTGATGGAG
+>NODE_15_length_129_cov_2.21622
+CCTAAATGTAGAGCTTAACAAAAGACTCATAATATACCTGTTTTTAAAAGATTGATTGAT
+GAAAGATCATGACTAATAACATTACAAACAATCCTACTATAATCAATACGGTGATTCAAA
+TGTCAATCT
+>NODE_16_length_128_cov_3.27397
+TTATCTTGGTTGTTTAATTGACTTATATTATCTAGGGCTGATACTCACAAGTGTATCATT
+AATGTAACATACCCTATAGTTCAGCAGTTGAAGCCTCTGCTATTAGTTGCCTCTTTCGGA
+GGGAAAAG
+>NODE_17_length_126_cov_2
+GAAATCCAAGATACGAAATGGTTAATTGTAACTAAACCCGCAGGTCATGTGTGTTAGGTT
+TCACAAATTATATATATTACTAACTCCATACTCGTAACTAACATTAGATAAGTAGGTGAA
+GAAAAA
+>NODE_18_length_124_cov_2.47826
+TTTTTCCAAGGCTAACAGCTGAACATTATAGAAGATGACCTTATTCGACTGCCTCACTTA
+TCTGGATGGGAGCTAGCTAAGACCATCATGCAATCAATTATTTCAGATAGCAATAATTCG
+TCGA
+>NODE_19_length_123_cov_2.13235
+ATGGGAATTTTACCACCTTGACCATCCTCCACTTTTCTCAACCAAAATTATTAGTGACTT
+AAGTATTTTTATAAAAGACAGAGCTACTGCAGTAGAAAGGACATGCTGGGATGCAGTATT
+CGA
+>NODE_20_length_121_cov_2.5
+GTCTCTGCATCCATGGTTATAACCTCGACTTGCCTAGGTAGCCTTGCTCTTTGGTCTTTA
+AACCAAGTAGGATTTGTTATGTCTGTTATTTGGCTTGCTGAGTTGTTAAGAATAATCTCA
+A
+>NODE_21_length_119_cov_2.1875
+ATCATTCACTACCCTTTTCTTAACTTATCCCAAGATAGGACTTCTGTACAGTTTTGGGGC
+CTTTGTAAGTTATTACCTTGGCAATACAATTCTTCGGACTAAGAAATTAACACTTGACA
+>NODE_22_length_117_cov_2.12903
+TCGTCGTCGGCATCGTCCAGTGGGTCTGCCTCTTCGTTGATTGGGGTCAGCATGCGAGGG
+CTGGTTGAGCCGGAGGGTTCGTTTCTTCTGTCATTGTCCGTGAGTGGAGCACAGGCA
+>NODE_23_length_113_cov_2.58621
+TCCACAAAGAGGGTGCTTTCTTCCTGTATGATCGACTTGCTTCCACAGTTATCTACCGAG
+GAACGACTTTCGCTGAAGGTGTCGTTGCATTTCTGATACTGCCCCAAGCTAAG
+>NODE_24_length_113_cov_2.06897
+GATGATGAAGGTTTTAATCTTCATCATTAGTTTTTTCTTAATTATAAAACGATCGTGTAA
+ATGTTGGGCAGGCTAGTAGGTAAGTTATAAAAGCATAATGTAATTTAATTTAG
+>NODE_25_length_112_cov_2.52632
+ACCATCGACCATGCCAGCCACACACCAGGCAGTGTGTCATCAGCATTCATCCTCGAAGCT
+ATGGTGAATGTCATATCGGGCCCCAAAGTGCTAATGAAGCAAATTCCAATTT
+>NODE_26_length_111_cov_2.51786
+AAGAGAAGTCAAGAACAAACCACCAGAGATCCACATGATGGCACTGAACGGAGTCTAGTC
+CTGCAAATGAGCCATGAAATAAAAAGAACGACAATTCCACTAGAGAACACG
+>NODE_27_length_110_cov_3.54545
+GCCATGATGCTTGATGCAATAAGCTTTCTTTTTGTTCACGTTCCGTAACTACCATCATAT
+TGCTAGGAAATGCTTTAGCAAGACCATCAGCTAACAGAGCTTCACAAAGT
+>NODE_28_length_110_cov_2.30909
+AGAGCGTCGTTCCAACAATCGAGCGCAAGGTTACAAGGTTGAACTGAGAGTGTCTAGACA
+ACAAAATATCGATACTCCAGACACCAAGCAAGACCTGAGAAAAAACCATG
+>NODE_29_length_109_cov_2.5
+CTTTCCATTATCTTTAGTCTTCATCCTTGATTCTACAATCATGACAGTTGTCTTTAATGA
+AAAAGGAAAAAAGCCTTTTTATTAAGTTGTAATAATCAGATCTGCAAAC
+>NODE_30_length_107_cov_2.59615
+ATTACCTTGTTGACACTGATCAAGACGGCAGAACACTGGGCGAGACAAGACATCCGAACC
+ATAGAGGATTCCAAATTAAGGGCATTGTTAACTCTATGTGCTGTGAT
+>NODE_31_length_107_cov_2.30769
+ATCCTAGTTTCATTGATTTGAGGTTGAGTTTTGCCGTGAAACAATCTGAAGAAAGACTAA
+AAGACAAATTTGCATATACAGAATAAAGCGATAACTGCAATTATAAC
+>NODE_32_length_107_cov_2.09615
+CCAAAATAAGCTTCACTAGAAGGATATTGTGAGGCGACAACACAATGGGTGTTACAGGAA
+TATTGCAGTTACCTCGTGATCGATTCAAGAGGACATCATTCTTTCTT
+>NODE_33_length_105_cov_2.7
+ACCTTATTATTACTAGCCGTTTTTCAAAGTTCAATTTGAGTCTTAATGCAAATAAGCGTT
+AAGCCACAGTTATAGCCATAATGGTAACTCAATATCTTAGCAAGC