Mercurial > repos > iuc > rnaspades
diff test-data/rnaspades-out1.fa @ 0:0d30fed9628b draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rnaspades commit 9bfb3d0e41daa3990a997b92438b9e56c2b6edbf
author | iuc |
---|---|
date | Tue, 13 Dec 2016 11:32:10 -0500 |
parents | |
children |
line wrap: on
line diff
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/rnaspades-out1.fa Tue Dec 13 11:32:10 2016 -0500 @@ -0,0 +1,122 @@ +>NODE_1_length_193_cov_2.51449 +CATCACCAATTGTATTGGACCAATGTGACCTTGTCACTAGAGCTTGCGGGTTGTATTCAT +CATACTCCCTTAATCCGCAACTACGCAACTGTAAACTCCCGAAACATATATACCGTTTAA +AATATGATGTAACTGTTACCAAGTTCTTAAGTGATGTACCAGTGGCGACATTGCCCATAG +ATTTCATAGTTCC +>NODE_2_length_186_cov_2.1374 +GTTCCAATTTCAATACTGCTCAATAATCCATTGTAGTTCACGACATGTAGAGCATCCAAT +TTGTTAATAAACTTGAGAATATTGGATCGAATCAACGACAGCATTTTTAGGCTCAATTGT +TCCTTGACACGTTGTGTTCGCATGTTGAAATGGTTAGTGTTGGTTGTTAGCAGCCAATCA +GAGATC +>NODE_3_length_181_cov_3.33333 +TTCATATTGGGCTAACTCATATATGCTGACTCAATAGTTAACTTGACATCTCTGCCTTCA +TAATCAGATATATAAGCATAATAAATAAATACTCATATTTCTTGATAATTTGTTTAACCA +CAGATAAATCCTCACTGTAAGCCAGCTTCCAAGTTGACACCCTTACAAAAACCAGGACTC +A +>NODE_4_length_178_cov_2.80488 +GCAGTTCGAACAGTGACTTGCTAATAAAACCATTTTTGGAAGCACGAGTAAATTTAAGTG +TTCAAGAAATACTTCAAATGACCCCTTCACATTACTCGGGAAATATTGTTCATAGGTACA +ACGATCAATACAGTCCTCATTCTTTCATGGCCAATCGTATGAGTATCTCAGCAACGCG +>NODE_5_length_156_cov_2.07921 +CATGCCGTTTTACGAGTAACTTTGGTATTCGCCGTAGCCTCCATCATCGGGGTCAACTAC +CACATCGGGAATGGTCGTATCCTGTGAGTCAGTCGGATCATCATCTTGATGGCCAGGATT +GTCGTCATCATTGATGGGTCCTGGAAAGGGAATGTC +>NODE_6_length_153_cov_2 +GTGGGCGTCCTCTCTCATATGAAGCTTCCATTTAAGAGTTGTCTGCACTCACTGTTTAAA +TTTCTATTGACTTTTTTACCAATGCTTTGTGTGTGTTAGGTTACAACTAAATTCTACCGG +TTTGCAGATCTGATTATTACAACTTAAGAAAAA +>NODE_7_length_153_cov_2.42857 +GAACCGCAAGAAGCCTGGGCCGGCGAAATTTTCCCTCCTTCATGAGTCCACACTGAAAGC +ATTTACACAAGGGTCCTCGACACGAATGCAAAGTTTAATTCTTGAATTCAATAGCTCTCT +TGCTATCTAACTAAGATGGACTACTTCATATTG +>NODE_8_length_151_cov_2.125 +TGAGTCCTCCTTTTAGAGGATTATTGTCATAAATCAATTCATTTTCTCGGTATCTTGTTA +AATCTAAATCCAATGTAGATGTGTATGTTAAGTACTGAGCTGGTACCTCCCGGGTGCAAC +ACTTAGTTAGATGAAGTTGAGCACGATTATA +>NODE_9_length_149_cov_2.54255 +AACATAATACACTGGAGCTTCAAACATAGCCAATGTGATTCTAACTCCTTTAAACTCACA +GTTAATCATAAACAAGGTTTGACATCAATCTAGCTATATCTTTAAGAATGATAAACTTGA +TGAAGATTAAGAAAAAGGTAATCTGTCGA +>NODE_10_length_143_cov_2.55682 +GTTTGTTTTTCGCACTTAGGGTGATAGTCCTACGTACAATCTGGCGCAGAAATGAAGTTA +AGTCTTGCGACCCAGGAACATTTAATCCGCTAGGATTTAGCACAAAGTCAATGGCAGTGC +AGTTCCCAGGGTTCTTCGCAATT +>NODE_11_length_137_cov_2.0122 +CCAGCAGCGCCAGACGGGATTCGGGGCTTCCCCCGGTGCCGGTATGTGCACAAAGTATCA +GGAACGGGACCATGTGCCGGAGACTTTGCCTTCCACAAAGAGGGTGCTTTCTTCCTGTAT +GATCGACTTGCTTCCAC +>NODE_12_length_134_cov_2.05063 +CTTCATATGAGAGAGGACGCCCCCGAGCTGCCAGACAGCATTCAAGGGATGGACACGACC +ACCATGTTCGAGCACGATCATCATCCAGAGAGAATTATCGAGGTGAGTACCGTCAATCAA +GGAGCGCCTCACAA +>NODE_13_length_133_cov_3.01282 +ACGACAAACTAGTTTGTCGACATCACTAACCTGTAATGTACTATTGTGGATAACTCCAAG +CGGGATGGAAAATGTTCTTTGGAAAAGGATAATTACCCAAAGAAAGAATGATGTCCTCTT +GACTGGATCACGA +>NODE_14_length_132_cov_2.41558 +GATGAAATTGCTGGCTGTACTCTTACATGTGTAAACAAGATTGTCGTGAGGATGTACATG +ATCATTTATGGTAGTTTTAAAAGCCTGGTGTCTTGATGAATCATGCACCAGCAGTTCTAC +GATCTGATGGAG +>NODE_15_length_129_cov_2.21622 +CCTAAATGTAGAGCTTAACAAAAGACTCATAATATACCTGTTTTTAAAAGATTGATTGAT +GAAAGATCATGACTAATAACATTACAAACAATCCTACTATAATCAATACGGTGATTCAAA +TGTCAATCT +>NODE_16_length_128_cov_3.27397 +TTATCTTGGTTGTTTAATTGACTTATATTATCTAGGGCTGATACTCACAAGTGTATCATT +AATGTAACATACCCTATAGTTCAGCAGTTGAAGCCTCTGCTATTAGTTGCCTCTTTCGGA +GGGAAAAG +>NODE_17_length_126_cov_2 +GAAATCCAAGATACGAAATGGTTAATTGTAACTAAACCCGCAGGTCATGTGTGTTAGGTT +TCACAAATTATATATATTACTAACTCCATACTCGTAACTAACATTAGATAAGTAGGTGAA +GAAAAA +>NODE_18_length_124_cov_2.47826 +TTTTTCCAAGGCTAACAGCTGAACATTATAGAAGATGACCTTATTCGACTGCCTCACTTA +TCTGGATGGGAGCTAGCTAAGACCATCATGCAATCAATTATTTCAGATAGCAATAATTCG +TCGA +>NODE_19_length_123_cov_2.13235 +ATGGGAATTTTACCACCTTGACCATCCTCCACTTTTCTCAACCAAAATTATTAGTGACTT +AAGTATTTTTATAAAAGACAGAGCTACTGCAGTAGAAAGGACATGCTGGGATGCAGTATT +CGA +>NODE_20_length_121_cov_2.5 +GTCTCTGCATCCATGGTTATAACCTCGACTTGCCTAGGTAGCCTTGCTCTTTGGTCTTTA +AACCAAGTAGGATTTGTTATGTCTGTTATTTGGCTTGCTGAGTTGTTAAGAATAATCTCA +A +>NODE_21_length_119_cov_2.1875 +ATCATTCACTACCCTTTTCTTAACTTATCCCAAGATAGGACTTCTGTACAGTTTTGGGGC +CTTTGTAAGTTATTACCTTGGCAATACAATTCTTCGGACTAAGAAATTAACACTTGACA +>NODE_22_length_117_cov_2.12903 +TCGTCGTCGGCATCGTCCAGTGGGTCTGCCTCTTCGTTGATTGGGGTCAGCATGCGAGGG +CTGGTTGAGCCGGAGGGTTCGTTTCTTCTGTCATTGTCCGTGAGTGGAGCACAGGCA +>NODE_23_length_113_cov_2.58621 +TCCACAAAGAGGGTGCTTTCTTCCTGTATGATCGACTTGCTTCCACAGTTATCTACCGAG +GAACGACTTTCGCTGAAGGTGTCGTTGCATTTCTGATACTGCCCCAAGCTAAG +>NODE_24_length_113_cov_2.06897 +GATGATGAAGGTTTTAATCTTCATCATTAGTTTTTTCTTAATTATAAAACGATCGTGTAA +ATGTTGGGCAGGCTAGTAGGTAAGTTATAAAAGCATAATGTAATTTAATTTAG +>NODE_25_length_112_cov_2.52632 +ACCATCGACCATGCCAGCCACACACCAGGCAGTGTGTCATCAGCATTCATCCTCGAAGCT +ATGGTGAATGTCATATCGGGCCCCAAAGTGCTAATGAAGCAAATTCCAATTT +>NODE_26_length_111_cov_2.51786 +AAGAGAAGTCAAGAACAAACCACCAGAGATCCACATGATGGCACTGAACGGAGTCTAGTC +CTGCAAATGAGCCATGAAATAAAAAGAACGACAATTCCACTAGAGAACACG +>NODE_27_length_110_cov_3.54545 +GCCATGATGCTTGATGCAATAAGCTTTCTTTTTGTTCACGTTCCGTAACTACCATCATAT +TGCTAGGAAATGCTTTAGCAAGACCATCAGCTAACAGAGCTTCACAAAGT +>NODE_28_length_110_cov_2.30909 +AGAGCGTCGTTCCAACAATCGAGCGCAAGGTTACAAGGTTGAACTGAGAGTGTCTAGACA +ACAAAATATCGATACTCCAGACACCAAGCAAGACCTGAGAAAAAACCATG +>NODE_29_length_109_cov_2.5 +CTTTCCATTATCTTTAGTCTTCATCCTTGATTCTACAATCATGACAGTTGTCTTTAATGA +AAAAGGAAAAAAGCCTTTTTATTAAGTTGTAATAATCAGATCTGCAAAC +>NODE_30_length_107_cov_2.59615 +ATTACCTTGTTGACACTGATCAAGACGGCAGAACACTGGGCGAGACAAGACATCCGAACC +ATAGAGGATTCCAAATTAAGGGCATTGTTAACTCTATGTGCTGTGAT +>NODE_31_length_107_cov_2.30769 +ATCCTAGTTTCATTGATTTGAGGTTGAGTTTTGCCGTGAAACAATCTGAAGAAAGACTAA +AAGACAAATTTGCATATACAGAATAAAGCGATAACTGCAATTATAAC +>NODE_32_length_107_cov_2.09615 +CCAAAATAAGCTTCACTAGAAGGATATTGTGAGGCGACAACACAATGGGTGTTACAGGAA +TATTGCAGTTACCTCGTGATCGATTCAAGAGGACATCATTCTTTCTT +>NODE_33_length_105_cov_2.7 +ACCTTATTATTACTAGCCGTTTTTCAAAGTTCAATTTGAGTCTTAATGCAAATAAGCGTT +AAGCCACAGTTATAGCCATAATGGTAACTCAATATCTTAGCAAGC