Mercurial > repos > iuc > samtools_fixmate
annotate test-data/2_isize_overflow.sam.expected @ 3:e5ece8fa99de draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_fixmate commit cd62639660bef041ba14ecff337fb98e84e75d8a
author | iuc |
---|---|
date | Mon, 20 Nov 2023 22:15:29 +0000 |
parents | bc0cc7bfbfe9 |
children |
rev | line source |
---|---|
0
bc0cc7bfbfe9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_fixmate commit 0fe00966500158720fb63dc9b28f6a4ca0d1e1eb
iuc
parents:
diff
changeset
|
1 @HD VN:1.4 SO:queryname |
bc0cc7bfbfe9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_fixmate commit 0fe00966500158720fb63dc9b28f6a4ca0d1e1eb
iuc
parents:
diff
changeset
|
2 @SQ SN:ref1 LN:45 |
bc0cc7bfbfe9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_fixmate commit 0fe00966500158720fb63dc9b28f6a4ca0d1e1eb
iuc
parents:
diff
changeset
|
3 @SQ SN:ref2 LN:40 |
bc0cc7bfbfe9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_fixmate commit 0fe00966500158720fb63dc9b28f6a4ca0d1e1eb
iuc
parents:
diff
changeset
|
4 of1 99 ref1 10 30 23M = 8 21 AAGTCGGCAGCGTCAGATGTGTA ??????????????????????? MQ:i:30 MC:Z:23M |
bc0cc7bfbfe9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_fixmate commit 0fe00966500158720fb63dc9b28f6a4ca0d1e1eb
iuc
parents:
diff
changeset
|
5 of1 147 ref1 8 30 23M = 10 -21 CTGTCTCTTATACACATCTCCTT ??????????????????????? MQ:i:30 MC:Z:23M |
bc0cc7bfbfe9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_fixmate commit 0fe00966500158720fb63dc9b28f6a4ca0d1e1eb
iuc
parents:
diff
changeset
|
6 r001 83 ref1 37 30 9M = 7 -39 CAGCGCCAT * MQ:i:30 MC:Z:8M4I4M1D3M |
bc0cc7bfbfe9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_fixmate commit 0fe00966500158720fb63dc9b28f6a4ca0d1e1eb
iuc
parents:
diff
changeset
|
7 r001 163 ref1 7 30 8M4I4M1D3M = 37 39 TTAGATAAAGAGGATACTG * XX:B:S,12561,2,20,112 YY:i:100 MQ:i:30 MC:Z:9M |
bc0cc7bfbfe9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_fixmate commit 0fe00966500158720fb63dc9b28f6a4ca0d1e1eb
iuc
parents:
diff
changeset
|
8 r002 0 ref1 9 30 1S2I6M1P1I1P1I4M2I * 0 0 AAAAGATAAGGGATAAA * XA:Z:abc XB:i:-10 |
bc0cc7bfbfe9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_fixmate commit 0fe00966500158720fb63dc9b28f6a4ca0d1e1eb
iuc
parents:
diff
changeset
|
9 r003 33 ref1 9 30 5H6M = 29 25 AGCTAA * MQ:i:30 MC:Z:6H5M |
bc0cc7bfbfe9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_fixmate commit 0fe00966500158720fb63dc9b28f6a4ca0d1e1eb
iuc
parents:
diff
changeset
|
10 r003 17 ref1 29 30 6H5M = 9 -25 TAGGC * MQ:i:30 MC:Z:5H6M |
bc0cc7bfbfe9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_fixmate commit 0fe00966500158720fb63dc9b28f6a4ca0d1e1eb
iuc
parents:
diff
changeset
|
11 r004 0 ref1 16 30 6M14N1I5M * 0 0 ATAGCTCTCAGC * |
bc0cc7bfbfe9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_fixmate commit 0fe00966500158720fb63dc9b28f6a4ca0d1e1eb
iuc
parents:
diff
changeset
|
12 r007 9 ref1 9 30 5H6M = 9 0 AGCTAA * MC:Z:* |
bc0cc7bfbfe9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_fixmate commit 0fe00966500158720fb63dc9b28f6a4ca0d1e1eb
iuc
parents:
diff
changeset
|
13 r007 5 ref1 9 30 * = 9 0 GGGGGG * MQ:i:30 MC:Z:5H6M |
bc0cc7bfbfe9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_fixmate commit 0fe00966500158720fb63dc9b28f6a4ca0d1e1eb
iuc
parents:
diff
changeset
|
14 u1 4 * 0 30 * * 0 0 TAATTGGGTCTTCAGAGCACCTA ??????????????????????? |
bc0cc7bfbfe9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_fixmate commit 0fe00966500158720fb63dc9b28f6a4ca0d1e1eb
iuc
parents:
diff
changeset
|
15 x1 0 ref2 1 30 20M * 0 0 AGGTTTTATAAAACAAATAA * |
bc0cc7bfbfe9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_fixmate commit 0fe00966500158720fb63dc9b28f6a4ca0d1e1eb
iuc
parents:
diff
changeset
|
16 x2 0 ref2 2 30 21M * 0 0 GGTTTTATAAAACAAATAATT ????????????????????? |
bc0cc7bfbfe9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_fixmate commit 0fe00966500158720fb63dc9b28f6a4ca0d1e1eb
iuc
parents:
diff
changeset
|
17 x3 0 ref2 6 30 9M4I13M * 0 0 TTATAAAACAAATAATTAAGTCTACA ?????????????????????????? |
bc0cc7bfbfe9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_fixmate commit 0fe00966500158720fb63dc9b28f6a4ca0d1e1eb
iuc
parents:
diff
changeset
|
18 x4 0 ref2 10 30 25M * 0 0 CAAATAATTAAGTCTACAGAGCAAC ????????????????????????? |
bc0cc7bfbfe9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_fixmate commit 0fe00966500158720fb63dc9b28f6a4ca0d1e1eb
iuc
parents:
diff
changeset
|
19 x5 0 ref2 12 30 24M * 0 0 AATAATTAAGTCTACAGAGCAACT ???????????????????????? |
bc0cc7bfbfe9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_fixmate commit 0fe00966500158720fb63dc9b28f6a4ca0d1e1eb
iuc
parents:
diff
changeset
|
20 x6 0 ref2 14 30 23M * 0 0 TAATTAAGTCTACAGAGCAACTA ??????????????????????? |