changeset 14:c65fce500915 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy/ commit 9d49b2a98de059ae9a053dc1c5a23537cf0311de
author iuc
date Sat, 18 May 2024 18:30:17 +0000
parents d18e7a6e5cd4
children e66884b1c1a5
files macros.xml remove_confounders.xml
diffstat 2 files changed, 4 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/macros.xml	Thu Mar 14 15:38:16 2024 +0000
+++ b/macros.xml	Sat May 18 18:30:17 2024 +0000
@@ -1,7 +1,7 @@
 <macros>
     <token name="@TOOL_VERSION@">1.9.6</token>
-    <token name="@VERSION_SUFFIX@">2</token>
-    <token name="@profile@">22.05</token>
+    <token name="@VERSION_SUFFIX@">3</token>
+    <token name="@profile@">21.09</token>
     <xml name="requirements">
         <requirements>
             <requirement type="package" version="@TOOL_VERSION@">scanpy</requirement>
--- a/remove_confounders.xml	Thu Mar 14 15:38:16 2024 +0000
+++ b/remove_confounders.xml	Sat May 18 18:30:17 2024 +0000
@@ -180,7 +180,7 @@
 inspired by Seurat's `regressOut` function in R.
 
 More details on the `scanpy documentation
-<https://icb-scanpy.readthedocs-hosted.com/en/stable/api/scanpy.pp.regress_out.html>`__
+<https://scanpy.readthedocs.io/en/stable/api/scanpy.pp.regress_out.html>`__
 
 Correct batch effects by matching mutual nearest neighbors, using `pp.mnn_correct`
 ==================================================================================
@@ -200,7 +200,7 @@
 Corrects for batch effects by fitting linear models, gains statistical power via an EB framework where information is borrowed across genes. This uses the implementation of ComBat
 
 More details on the `scanpy documentation
-<https://icb-scanpy.readthedocs-hosted.com/en/stable/api/scanpy.pp.combat.html>`__
+<https://scanpy.readthedocs.io/en/stable/api/generated/scanpy.pp.combat.html>`__
 
 
     ]]></help>