Mercurial > repos > iuc > seurat

changeset 7:4c139a9415d7 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/seurat commit 8f89414ecee8120447febc2902ff1ddbbd71e638"
author iuc
date Thu, 01 Oct 2020 22:52:35 +0000
parents 764f076e9d52
children 828324f3292f
files seurat.xml
diffstat 1 files changed, 3 insertions(+), 12 deletions(-) [+]
line wrap: on
line diff
--- a/seurat.xml	Thu Jul 23 11:22:05 2020 -0400
+++ b/seurat.xml	Thu Oct 01 22:52:35 2020 +0000
@@ -1,20 +1,11 @@
-<tool id="seurat" name="Seurat" version="@TOOL_VERSION@+galaxy2">
+<tool id="seurat" name="Seurat" version="@TOOL_VERSION@+galaxy0">
     <description>- toolkit for exploration of single-cell RNA-seq data</description>
     <macros>
-        <token name="@TOOL_VERSION@">3.1.5</token>
+        <token name="@TOOL_VERSION@">3.2.2</token>
     </macros>
     <requirements>
         <requirement type="package" version="@TOOL_VERSION@">r-seurat</requirement>
-        <requirement type="package" version="2.2">r-rmarkdown</requirement>
-        <!-- Need to pin R-base due to
-*** caught segfault ***
-address (nil), cause 'memory not mapped'
-
-Traceback:
- 1: cairoVersion()
- 2: grSoftVersion()
-        -->
-        <requirement type="package" version="3.6">r-base</requirement>
+        <requirement type="package" version="2.4">r-rmarkdown</requirement>
     </requirements>
     <command detect_errors="exit_code"><![CDATA[
 #if "vln" in $meta.plots: