Mercurial > repos > iuc > sina

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+++ b/README.md	Wed Oct 23 18:28:17 2019 -0400
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+**Add reference libraries**
+
+[Reference databases](https://www.arb-silva.de/download/arb-files/) provided by the [SILVA project](https://www.arb-silva.de/) can be used within this wrapper by adding the corresponding files to the tool-data directory and editing` tool-data/sina_references.loc.sample` as follows:
+
+    LSU_Parc	${__HERE__}/SILVA_132_LSUParc_12_12_17_opt.arb
+    LSU_Ref	${__HERE__}/SILVA_132_LSURef_07_12_17_opt.arb
+    SSU_Ref	${__HERE__}/SILVA_132_SSURef_12_12_17_opt.arb
+    Ref_NR_99	${__HERE__}/SILVA_132_SSURef_NR99_13_12_17_opt.arb
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+++ b/macros.xml	Wed Oct 23 18:28:17 2019 -0400
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+<macros>
+    <token name="@TOOL_VERSION@">1.5.0</token>
+    <token name="@WRAPPER_VERSION@">galaxy0</token>
+    <xml name="requirements">
+        <requirements>
+            <requirement type="package" version="@TOOL_VERSION@">sina</requirement>
+            <yield/>
+        </requirements>
+    </xml>
+</macros>
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+++ b/sina.xml	Wed Oct 23 18:28:17 2019 -0400
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+<tool id="sina" name="SINA" version="@TOOL_VERSION@+@WRAPPER_VERSION@">
+    <description>reference based multiple sequence alignment</description>
+    <macros>
+        <import>macros.xml</import>
+    </macros>
+    <expand macro="requirements"/>
+    <stdio></stdio>
+    <command detect_errors="exit_code"><![CDATA[
+        ## initialize
+        ## parse custom reference from fasta to arb file format
+
+        #if $db.select == 'custom'
+            #if $db.custom.ext == 'fasta'
+                sina -i '$db.custom' --prealigned -o ./reference.arb &&
+            #else
+                ln -s '$db.custom' ./reference.arb &&
+            #end if
+        #elif $db.select == 'local'
+            ln -s '$db.arb_databases.fields.path' ./reference.arb &&
+        #end if
+
+        ## run
+        sina
+            --in='$in'
+            --db=./reference.arb
+            -p \${GALAXY_SLOTS:-4}
+            --num-pts=\${GALAXY_SLOTS:-4}
+
+            #if $os.type == 'arb'
+                --outtype='arb'
+                --out=output.arb
+            #elif $os.type == 'fasta'
+                --outtype='fasta'
+                --out=output.fasta
+                --min-idty=$os.minidty
+            #elif $os.type == 'fasta_meta'
+                --outtype='fasta'
+                --out=output.fasta
+                --min-idty=$os.minidty
+                --meta-fmt='csv'
+            #end if
+            #if $log == 'yes'
+                --log-file=$logfile
+            #elif $log == 'yes_meta'
+                --log-file=$logfile
+                --show-diff
+            #end if
+
+            ## Advanced alignment parameters
+            --overhang=$ap.overhang
+            --insertion=$ap.insertion
+            #if $ap.turn == 'yes'
+                -t
+            #elif $ap.turn == 'all'
+                -t all
+            #end if
+
+            ## Expert Alignment Parameters
+            --fs-min=$eap.fsmin
+            --fs-max=$eap.fsmax
+            --fs-msc=$eap.fsmsc
+            --fs-weight=$eap.fsweight
+            --fs-req=$eap.fsreq
+            --fs-req-full=$eap.fsreqfull
+            --fs-full-len=$eap.fsfulllen
+            --gene-start=$eap.genestart
+            --gene-end=$eap.geneend
+            --fs-cover-gene=$eap.fscovergene
+            --match-score=$eap.matchscore
+            --mismatch-score=$eap.mismatchscore
+            --pen-gap=$eap.pengap
+            --pen-gapext=$eap.pengapext
+            --fs-kmer-len=$eap.fskmerlen
+            --fs-kmer-mm=$eap.fskmermm
+            $eap.fskmernofast
+            $eap.fskmernorel
+
+            ## Advanced search and classification parameters
+            #if $asacp.activate == 'yes'
+                --search
+                --search-kmer-candidates=$asacp.searchkmercandidates
+                --lca-quorum=$asacp.lcaquorum
+                --search-kmer-len=$asacp.searchkmerlen
+                --search-kmer-mm=$asacp.searchkmermm
+                --search-max-result=$asacp.searchmaxresult
+                $asacp.searchnofast
+                $asacp.searchkmernorel
+            #end if
+
+            ## convert meta file to tabular
+            #if $os.type == 'fasta_meta'
+                && cat output.csv | sed 's/,/\t/g' > output.tsv
+            #end if
+    ]]></command>
+    <!-- Sections and default parameters are based on https://www.arb-silva.de/aligner -->
+    <inputs>
+        <param argument="--in" type="data" format="fasta" multiple="false" label="Sequence file" help="FASTA file format"/>
+        <conditional name="db">
+            <param name="select" type="select" label="Reference library type" help="">
+                <option value="custom" selected="true">Custom</option>
+                <option value="local">Local cached</option>
+            </param>
+            <when value="custom">
+                <param name="custom" type="data" format="data" label="Reference library file" help="FASTA or ARB file format (--db)"/>
+            </when>
+            <when value="local">
+                <param name="arb_databases" type="select" label="Local cached libraries" help="">
+                    <options from_data_table="sina_references">
+                        <validator message="No database is available" type="no_options"/>
+                    </options>
+                </param>
+            </when>
+        </conditional>
+        <conditional name="asacp">
+            <param name="activate" type="select" label="Enable search stage" help="(--search)">
+                <option value="no">No</option>
+                <option value="yes">Yes</option>
+            </param>
+            <when value="no"></when>
+            <when value="yes">
+                <param name="searchkmercandidates" type="integer" value="1000" label="Set number of candidate reference sequences retrieved from the k-mer based search." help="For each candidate, the MSA based similarity is calculated and the search result based on these numbers. A value for n one or two orders larger than --search-max-result is usually quite sufficient. (--search-kmer-candidates)"/>
+                <param name="lcaquorum" type="float" value="0.8" min="0.0" max="1.0" label="Fraction of the search result that must share the same classification" help="Using the default parameters --search-max-result=10 and --lca-quorum=0.7, this means that the deepest classification shared by 7 out of the top 10 search results is chosen for the query sequence. (--lca-quorum)"/>
+                <param name="searchkmerlen" type="integer" value="10" min="0" label="Set k for the kmer based candidate search." help="See --fs-kmer-len. (--search-kmer-len)"/>
+                <param name="searchkmermm" type="integer" value="0" min="0" label="Set the number of allowed mismatches within each kmer." help="See --fs-kmer-mm.  (--search-kmer-mm)"/>
+                <param name="searchnofast" type="boolean" truevalue="--search-no-fast" falsevalue="" checked="true" label="Skip fast family search." help="This option configures the same behavior for the search stage. See --fs-kmer-no-fast. (--search-no-fast)"/>
+                <param name="searchkmernorel" type="boolean" truevalue="--search-kmer-norel" falsevalue="" checked="false" label="Configures the candidate search to use absolute rather than length-relative scores for ordering the results." help="See --fs-kmer-norel. ( --search-kmer-norel)"/>
+                <param name="searchmaxresult" type="integer" value="10" min="0" label="The maximum number of search results to return for each query sequence." help="(--search-max-result)"/>
+            </when>
+        </conditional>
+        <conditional name="os">
+            <param name="type" type="select" label="Output file type" help="(--outtype)">
+                <option value="fasta">FASTA</option>
+                <option value="fasta_meta">FASTA with meta-file</option>
+                <option value="arb">ARB</option>
+            </param>
+            <when value="fasta">
+                <param name="minidty" type="float" value="0.7" min="0.0" max="1.0" label="Exclude sequences sharing less than this value fractional identity with any of the alignment reference sequences from the output." help="(--min-idty)"/>
+            </when>
+            <when value="fasta_meta">
+                <param name="minidty" type="float" value="0.7" min="0.0" max="1.0" label="Exclude sequences sharing less than this value fractional identity with any of the alignment reference sequences from the output." help="(--min-idty)"/>
+            </when>
+            <when value="arb"/>
+        </conditional>
+        <param name="log" type="select" label="Create log file" help="(--log-file, --show-diff)">
+            <option value="no">no</option>
+            <option value="yes">yes</option>
+            <option value="yes_meta">yes with differences between the inferred alignment and the original alignment</option>
+        </param>
+        <section name="ap" title="Alignment parameters">
+            <param argument="--overhang" type="select" label="Bases remaining unaligned at the ends should be" help="">
+                <option value="attach">attached to the last aligned base.</option>
+                <option value="edge">moved to the edge of the alignment.</option>
+                <!-- maybe broken, see https://sina.readthedocs.io/en/latest/commandline.html#alignment-options -->
+                <option value="remove">removed.</option>
+            </param>
+            <param argument="--insertion" type="select" label="Insertions wider than available columns should be">
+                <option value="forbid">forbidden during alignment.</option>
+                <option value="shift">accomodated by pushing out surrounding bases.</option>
+                <option value="remove">removed.</option>
+            </param>
+            <param argument="--turn" type="select" label="Enable turn check stage" help="Sequences not oriented in accordance with the reference database will be reverse complemented as needed. If all is specified, sequences will also be tested for only reversal or only complemented (this should only be necessary if your data was mishandled).">
+                <option value="yes">Yes</option>
+                <option value="no">No</option>
+                <option value="all">All</option>
+            </param>
+        </section>
+        <section name="eap" title="Expert alignment parameters">
+            <param name="fsmin" type="integer" value="15" min="0" label="Minimum number of reference sequences used for each query" help="(--fs-min)"/>
+            <param name="fsmax" type="integer" value="40" min="0" label="Maximum number of reference sequences used for each query" help="(--fs-max)"/>
+            <param name="fsmsc" type="float" value="0.7" min="0.0" max="1.0" label="Minimum similarity reference sequences" help="Required to have with the query sequence. This affects the range between --fs-min and --fs-max(--fs-msc)"/>
+            <param name="fsweight" type="integer" value="1" min="0" label="Adjust the weight factor for the frequency at which a node was observed in the reference alignment." help="Use 0 to disable weighting. This feature prefers the more common placement for bases with inconsistent alignment in the reference database. (--fs-weight)"/>
+            <param name="fsreq" type="integer" value="1" min="0" label="Minimum number of reference sequences that must be found in order to attempt alignment" help="If fewer sequences than indicated here are found, the respective query sequence will be discarded. (--fs-req)"/>
+            <param name="fsreqfull" type="integer" value="1" min="0" label="Minimum number of full length reference sequences that must be included in the selected reference set" help="The search will proceed regardless of other settings until this setting has been satisfied. If it cannot be satisfied by any sequence in the reference database, the query sequence will be discarded. This setting exists to ensure that the entire length of the query sequence will be covered in the presence of partial sequences contained within your reference database. Note: If you are working with sequences other than 16S, you need to adjust this value or the value of --fs-full-len accordingly. In particular when working with short reference sequences, this setting may prevent any acceptable reference sequences from being found, leading to no sequences being aligned. (--fs-req-full)"/>
+            <param name="fsfulllen" type="integer" value="1400" min="0" label="Minimum length a sequence is required to have to be considered full length" help="(--fs-full-len)"/>
+            <param name="genestart" type="integer" value="0" min="0" label="Sets the beginning of the gene within the reference alignment." help="See --fs-cover-gene. (--gene-start)"/>
+            <param name="geneend" type="integer" value="0" min="0" label="Sets the end of the gene within the reference alignment." help="See --fs-cover-gene. (--gene-end)"/>
+            <param name="fscovergene" type="integer" value="0" label="Require total of n sequences to cover each the beginning and the end of the gene within the alignment." help="Similar to --fs-req-full.  This option is more precise than --fs-req-full, but requires that the column numbers for the range in which the full gene is expected be specified via --gene-start and --gene-end. (--fs-cover-gene)"/>
+            <param name="matchscore" type="integer" value="2" min="0" label="Score given for a match" help="(--match-score)"/>
+            <param name="mismatchscore" type="integer" value="-1" max="0" label="Score given for a mismatch" help="(--mismatch-score)"/>
+            <param name="pengap" type="integer" value="5" min="0" label="Set the penalty subtracted from the score for opening a gap." help="(--pen-gap)"/>
+            <param name="pengapext" type="integer" value="2" min="0" label="Set the penalty subtracted from the score for extending a gap." help="(--pen-gapext)"/>
+            <param name="fskmerlen" type="integer" value="10" min="0" label="Size of k for the reference search" help="For SSU rRNA sequences, the default of 10 is a good value. For different sequence types, different values may perform better. For 5S, for example, 6 has shown to be more effective. (--fs-kmer-len)"/>
+            <param name="fskmermm" type="integer" value="0" min="0" label="Allow k-mer matches in the reference database to contain this number of mismatches." help=" (--fs-kmer-mm)"/>
+            <param name="fskmernofast" type="boolean" truevalue="--fs-kmer-no-fast" falsevalue="" checked="false" label="Use all k-mers occurring in the query sequence in the search." help="By default, only k-mers starting with an A are used for extra performance. (--fs-kmer-no-fast)"/>
+            <param name="fskmernorel" type="boolean" truevalue="--fs-kmer-norel" falsevalue="" checked="false" label="Use absolute match scores in the kmer search." help="Absolute (number of shared k-mers) rather than relative (number or shared k-mers divided by length of reference sequence) (--fs-kmer-norel)"/>
+        </section>
+    </inputs>
+    <outputs>
+        <data name="output_fasta" format="fasta" from_work_dir="output.fasta" label="${tool.name} on ${on_string}: alignment">
+            <filter>os['type'] == 'fasta' or os['type'] == 'fasta_meta'</filter>
+        </data>
+        <data name="output_arb" format="data" from_work_dir="output.arb" label="${tool.name} on ${on_string}: alignment">
+            <filter>os['type'] == 'arb'</filter>
+        </data>
+        <data name="output_meta" format="csv" from_work_dir="output.tsv" label="${tool.name} on ${on_string}: meta information">
+            <filter>os['type'] == 'fasta_meta'</filter>
+        </data>
+        <data name="logfile" format="txt" label="${tool.name} on ${on_string}: log">
+            <filter>log == 'yes' or log == 'yes_meta'</filter>
+        </data>
+    </outputs>
+    <tests>
+        <!-- name pattern of outputfile: output_<in_filetype>_<db_filetype>.<os.type>" -->
+        <!-- #1 in: *.fasta; db: *.fasta; out: *.fasta; standard parameters -->
+        <test>
+            <param name="in" value="sequence.fasta"/>
+            <conditional name="db">
+                <param name="custom" value="reference.fasta"/>
+            </conditional>
+            <section name="os">
+                <param name="type" value="fasta_meta"/>
+                <param name="minidty" value="0.0"/>
+            </section>
+            <output name="output_meta">
+                <assert_contents>
+                    <has_text text="FJ203641.1"/>
+                    <has_n_lines n="18"/>
+                </assert_contents>
+            </output>
+            <output name="output_fasta">
+                <assert_contents>
+                    <has_line line=">FJ203641.1"/>
+                    <has_line line=">WH051F03"/>
+                    <has_n_lines n="34"/>
+                </assert_contents>
+            </output>
+        </test>
+        <!-- #2 in: *.fasta; db: *.fasta; out: *.arb; standard parameters -->
+        <test>
+            <param name="in" value="sequence.fasta"/>
+            <conditional name="db">
+                <param name="custom" value="reference.fasta"/>
+            </conditional>
+            <section name="os">
+                <param name="type" value="arb"/>
+            </section>
+            <output name="output_arb" file="output_fasta_fasta.arb" compare="sim_size" delta="100"/>
+        </test>
+        <!-- #3 in: *.fasta; db: *.arb; out: *.fasta; standard parameters -->
+        <test>
+            <param name="in" value="sequence.fasta"/>
+            <conditional name="db">
+                <param name="custom" value="reference.arb"/>
+            </conditional>
+            <section name="os">
+                <param name="type" value="fasta_meta"/>
+                <param name="minidty" value="0.0"/>
+            </section>
+            <output name="output_meta">
+                <assert_contents>
+                    <has_text text="FJ203641.1"/>
+                    <has_n_lines n="18"/>
+                </assert_contents>
+            </output>
+            <output name="output_fasta">
+                <assert_contents>
+                    <has_line line=">FJ203641.1"/>
+                    <has_line line=">WH051F03"/>
+                    <has_n_lines n="34"/>
+                </assert_contents>
+            </output>
+        </test>
+        <!-- #4 in: *.fasta; db: *.arb; out: *.arb; standard parameters -->
+        <test>
+            <param name="in" value="sequence.fasta"/>
+            <conditional name="db">
+                <param name="custom" value="reference.arb"/>
+            </conditional>
+            <section name="os">
+                <param name="type" value="arb"/>
+            </section>
+            <output name="output_arb" file="output_fasta_arb.arb" compare="sim_size" delta="1000"/>
+        </test>
+        <!-- #5 in: *.fasta; db: *.arb; out: *.fasta; custom parameters -->
+        <test>
+            <param name="in" value="sequence.fasta"/>
+            <conditional name="db">
+                <param name="custom" value="reference.arb"/>
+            </conditional>
+            <section name="os">
+                <param name="type" value="fasta"/>
+                <param name="minidty" value="0.0"/>
+            </section>
+            <section name="ap">
+                <param name="overhang" value="edge"/>
+                <param name="insertion" value="shift"/>
+                <param name="turn" value="all"/>
+            </section>
+            <section name="eap">
+                <param name="fsmin" value="14"/>
+                <param name="fsmax" value="41"/>
+                <param name="fsmsc" value="0.8"/>
+                <param name="fsweight" value="1"/>
+                <param name="fsreq" value="1"/>
+                <param name="fsreqfull" value="1"/>
+                <param name="fsfulllen" value="1399"/>
+                <param name="genestart" value="0"/>
+                <param name="geneend" value="0"/>
+                <param name="fscovergene" value="0"/>
+                <param name="matchscore" value="1"/>
+                <param name="mismatchscore" value="-2"/>
+                <param name="pengap" value="6"/>
+                <param name="pengapext" value="1"/>
+                <param name="fskmerlen" value="9"/>
+                <param name="fskmermm" value="1"/>
+                <param name="fskmernofast" value="--fs-kmer-no-fast"/>
+                <param name="fskmernorel" value=""/>
+            </section>
+            <section name="asacp">
+                <param name="searchkmercandidates" value="1001"/>
+                <param name="lcaquorum" value="0.9"/>
+                <param name="searchkmerlen" value="9"/>
+                <param name="searchkmermm" value="1"/>
+                <param name="searchnofast" value=""/>
+                <param name="searchkmernorel" value="--search-kmer-norel"/>
+                <param name="searchmaxresult" value="10"/>
+            </section>
+            <output name="output_fasta">
+                <assert_contents>
+                    <has_line line=">FJ203641.1"/>
+                    <has_line line=">WH051F03"/>
+                    <has_n_lines n="34"/>
+                </assert_contents>
+            </output>
+        </test>
+        <!-- #6 in: *.fasta; db: <arb_databases>.arb; out: *.fasta; standard parameters -->
+        <test>
+            <param name="in" value="sequence.fasta"/>
+            <conditional name="db">
+                <param name="select" value="local"/>
+                <param name="arb_databases" value="testarb"/>
+            </conditional>
+            <section name="os">
+                <param name="type" value="arb"/>
+            </section>
+            <output name="output_arb" file="output_fasta_arb.arb" compare="sim_size" delta="1000"/>
+        </test>
+    </tests>
+
+    <help><![CDATA[
+.. class:: infomark
+
+**What it does**
+
+SINA aligns nucleotide sequences to match a pre-existing MSA using a graph-based alignment algorithm similar to PoA. The graph approach allows SINA to incorporate information from many reference sequences without blurring highly variable regions. While pure NAST implementations are highly dependent on finding a good match in the reference database, SINA is able to align sequences relatively distant to references with good quality and will yield a robust result for query sequences with many close references.
+
+While adding sequences to an MSA with SINA is usually faster than re-computing the entire MSA from an augmented set of unaligned sequences, the primary benefit lies in protecting investments made into the original MSA such as manual curation of the alignment, compute-intensive phylogenetic tree reconstruction and taxonomic annotation of the resulting phylogeny. Additionally, SINA includes a homology search which uses the previously computed alignment to determine the most similar sequences.  Based on the search results, a LCA-based classification of the query sequence can be computed using taxonomic classifications assigned to the sequences comprising the reference MSA.
+
+SINA is used to compute the large and small subunit ribosomal RNA alignments provided by the `SILVA project <https://www.arb-silva.de/>`_ and is able to use the `ARB format reference databases <https://www.arb-silva.de/download/arb-files/>`_ released by the project.
+
+**Input**
+
+SINA requires sequences in FASTA file format, whereas libraries can be also provided as ARB files. Furthermore, reference databases can be added as data tables. See README.md for more information.
+
+**Output**
+
+Results are provided in FASTA or ARB file format, whereas additional metadata is provided as CSV.
+
+.. class:: infomark
+
+**References**
+
+More information can be found on the `project website <https://sina.readthedocs.io/en/latest>`_, and on `github <https://github.com/epruesse/SINA>`_.  An `online version <https://www.arb-silva.de/aligner>`_ of SINA is provided by the SILVA project.
+    ]]></help>
+    <citations>
+        <citation type="doi">10.1093/bioinformatics/bts252</citation>
+    </citations>
+</tool>
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/reference.fasta	Wed Oct 23 18:28:17 2019 -0400
@@ -0,0 +1,282 @@
+>ThfPende Thermofilum pendens
+--------------------------------------ACUCCGGUU-GAU-CCUGCCGGACCCG-ACC-GC-UAUC-GGG-GUGG--GGCUAACCCAU-GGAAGU-CUA-GGAG-CC-------------------------------------------------------GGG---------------------------------GCUACG---------------------------------GCC---------------------------------------------------------GG--CUC-CGG-C-GG--A-CGGCUCAGU---AGC-ACGUGGC-UAA--CCU-AC-CCUCGGGA-GG--GGGAU-AA-CCCCG-G-GAAA-CUG-GGG-AUAAACCC-C-CAU-A------G-GCG-C--G-GA--CAC-------------------------------------------------------------------------------------------CUG-GAAU-----------------------------------------------------------------------------------GGG--U-C--C--GC-GCU-GAAA-GGG-C-CA-C----G-GUA-----CCAUGCU------UA--CC---GUGG-CC-G--C----------CC----------GAGG---AUG-G-GGCUGCGC-CCU--A------UC-A-G-GU-A-G---UUGGCG-GG-G-UAAC-GG-CCCGCCAA-GCCG-AUA-ACGGGUGGGGGCCGU-G-AG-------------A-GCGG-GAGC-CCCGAGAUGGGCA-CUGA-GA-CAAG-GGCCCAG-GCC-C-UACG--GGGU-GC-A-CC-A-G-GGGCG-AAACUUCCG--------------------CAAU-GCGG-GAAA-CCGUGACGGAGUCACCCCGAG-UGC-CA-C-----C-CG----AA-G-----AGG--G-------------------------UGGCUUUU-GC-CCGG-U-------------------------------C-----U-AA-AA----A--------------------------G-C-CG--G-GCG---------AA-UAAGC-GGGGGGCAAGC-UUGGU---GUCAGCCGCCG-CGGUAAU-AC-CAA-CCCCGCG-A-GUG-GUCGG-GACGUUUAUUGGGCCUAAAGCGUCCG-UAG-C-CGGCCC-GGUAAG-UCCC-UCCUU-AAA-GC-CCACGG-CUC-AA-CCGUGG-GAG---------------------------------------------CG-G-A----------------------------------------------GGGA-UAC-UGCCG-GGC-U-A-G-GG-GG-----CGGGAG-AGGCC-GGG-GGUACU-CCU--------------------GGG-GUA-GGG-GCGAAA-UC-C-UAUAAU-CCCAGGAGG-ACC-A-CCAG--U-G-GCGAAGGCGC--CCGGCUA------GCACG--------------------------------------------------------------CGC-CC--GACG-----GUGA-GG--GACGAAA-G-C-UGGGG-GAGC-AAAGGGG-AUUAGAUAC-----CCCCGUAG-UCCCA-GCUGUAAACGAUG-CGGG-CUAGGUG-UUGGACGG--GC-UUCGA--------------------------------GCC-CGUCCAG-UGCC-GUA-GGGAAGCCGU-UAA-GCCC-GCCGCCUG-GGGAGUACGGCC-GCAA-GGCU-GAA-ACUU-AAA-GGAAUUG-GCGGGGG-AGC--ACCA--CA-A-GGG-GUGAAG-CU-UGCGGU-UUAAUUG-G-AGUCAACG-CCGGA-AA-CCUUA-CCGGGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACAGC-AGGAUGAAGGCCAGGCUGACGACCUUGCC-AGA-CGAGCUGAGAGGA-GGUGCAUGGCCGUCGCCG-GCUCGUGCC-GUGA-GGUGU-CCUG-UUAA-GU-CAGGGAAC-GAGCGAGACC-CCCG-CC--CCUAG---U-U-GC-U-AC-CC--A--GCCC--------------------------UUCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGG---C-UGGGG-CACU-C-U-AGG-GGGAC-U-GCCG-GC-G-A-UAA-GCC-G--GAGG-A-AGG-U-GGGG-GCUACGGC--AGGUCAGUAU-G-CC-CCGAAAC--CC-C-C-GGGCUACACGCGAGCUGCAAUGG-CGGGGA--C-AGC-GGGU-U-CC-G-A-C-CCCG-AA-AGGG-G-----------GA-G-GUAA-UCC-CU-U-AAACCCC-GCC-UCAGUAGGAA-UCGAGGGC-U-GCAACUC-GCCCUCG-UGAACGUGGAAU-CCCUAGUA-ACCGC-GUG-UC-ACC-AA-CGCGCGGUG-AAU-ACGUC-CCUGCUCCUUGCA----CACACCGCCCGUC-GCU--CCACCCGA-GGGAGGCCUAGGU-GA-G-GCCU-C-C-U-GC----C----------------------------------GACG-A---------------------------------------G-GU-G-GGAGGU-CGAACCUGGGCCUCC-CA-AGG-GGGGAG-AAGUCGUAACAAGGUGGCCGUAGGGGAACCUG-CGGC-CGGAUCACCUCC-------------------------------------------------------------------------------------------
+>ThpTenax Thermoproteus tenax
+--------------------------------------AAACCGGUU-GAU-CCUGCCGGACC-UGACC-GC-UAUC-GGG-GUGG--GGCUAAGCCAU-GCGAGU-CGC-GCGC-CC--------------------------------------------------------GG----------------------------------GGCG----------------------------------CC----------------------------------------------------------GG--GCG-CGG-C-GC--A-CGGCUCAGU---AAC-ACGUACC-CAA--CCU-AA-CCUCGGGA-GG--GGGAC-AA-CCCCG-G-GAAA-CUG-GGG-CUGAUCCC-C-CAU-A------G-GGG-A--A-GG--GCG-------------------------------------------------------------------------------------------CUG-GAAG-----------------------------------------------------------------------------------GCC--C-C--U--UC-CUC-CAAA-GGG-A-UC-G----C-GGG-----CGAUCU-------CC--CG---CGGU-CC-G--C----------CC----------GAGG---GUG-G-GGGUACGG-CCC--A------UC-A-G-GU-U-G---UUGGCG-GG-G-UAAC-GG-CCCGCCAA-GCCG-AAG-ACGGGUAGGGGCGGU-G-AG-------------A-GCCGUGAGC-CCCGAGAUGGGCA-CUGA-GA-CAAG-GGCCCAG-GCC-C-UACG--GGGU-GC-A-GC-A-G-GCGCG-AAUACUCCG--------------------CAAU-GCGG-GCAA-CCGCGACGGGGCCACCCCGAG-UGC-CG-G-----G-CG----AA-G-----AGC--C-------------------------CGGCUUUU-GC-CCGG-U-------------------------------G-----U-AA-GG----A--------------------------G-C-CG--G-GCG---------AA-UAAGC-GGGGGGUAAGU-CUGGU---GUCAGCCGCCG-CGGUAAU-AC-CAG-CCCCGCG-A-GUG-GUCAG-GGUGAUUACUGGGCUUAAAGCGCCCG-UAG-C-CGGCCC-GGCAAG-UCGC-UCCUG-AAA-UC-CCCAGG-CUC-AA-CCUGGG-GGC-A-------------------------------------------GG-G-G----------------------------------------------GCGA-UAC-UGCCG-GGC-U-A-G-GG-GG-----CGGGAG-AGGCC-GCC-GGUACU-CCG--------------------GGG-GUA-GGG-GCGAAA-UC-C-UAUAAU-CCCCGGAGG-ACC-A-CCAG--U-G-GCGAAAGCGG--GCGGCCA------GAACG--------------------------------------------------------------CGC-CC--GACGG-----UGA-GG--GGCGAAA-G-C-CGGGG-GAGC-AAAGGGG-AUUAGAUAC-----CCCUGUAG-UCCCG-GCCGUAAACGAUG-CGGG-CUAGCUG-UCGGCCGG--GC-UUAGG--------------------------------GCC-CGGCCGG-UGGC-GUA-GGGAAACCGU-UAA-GCCC-GCCGCCUG-GGGAGUACGGCC-GCAA-GGCU-GAA-ACUU-AAA-GGAAUUG-GCGGGGG-GGC--ACCA--CA-A-GGG-GUGAAG-CU-UGCGGC-UUAAUUG-G-AGUCAACG-CCGGA-AA-CCUUA-CCCGGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACAGC-AGGAUGAAGGCCAGGCUAACGACCUUGCC-GGA-CGAGCUGAGAGGA-GGUGCAUGGCCGUCGUCA-GCUCGUGCC-GUGA-GGUGU-CCGG-UUAA-GU-CCGGCAAC-GAGCGAGACC-CCCA-CC--CCUAG---U-U-GC-U-AC-CC--C--GCUC--------------------------UUCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGG---C-GGGGG-CACA-C-U-AGG-GGGAC-U-GCCG-GC-G---UAA-GCC-G--GAGG-A-AGG-A-GGGG-GCGACGGC--AGGUCAGUAU-G-CC-CCGAAAC--CC-C-G-GGGCUGCACGCGAGCUGCAAUGG-CGGGGA--C-AGC-GGGA-U-CC-G-A-C-CCCG-AA-AGGG-G-----------GA-G-GCAA-UCC-CG-U-AAACCCC-GCC-CCAGUAGGGA-UCGAGGGC-U-GCAACUC-GCCCUCG-UGAACGUGGAAU-CCCUAGUA-ACCGC-GUG-UC-ACC-AA-CGCGCGGUG-AAU-ACGUC-CCUGCCCCUUGCA----CACACCGCCCGUC-GCA--CCACCCGA-GGGAGUUCUCUGC-GA-G-GCCC-C-U-C-GC----UUGGG-------------------------------GCA-A-----------------------------------CCCAG-GU-G-GGGGGA-CGAGCAGAGAACUCC-CG-AGG-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCC-------------------------------------------------------------------------------------------
+>SulSolf3 Sulfolobus solfataricus
+--------------------------------------AUUCCGGUU-GAU-CCUGCCGGACCCG-ACC-GC-UAUC-GGG-GUAG--GGAUAAGCCAU-GGGAGU-CUU-ACAC-UC-------------------------------------------------------CCG----------------------------------GGUA----------------------------------AGG---------------------------------------------------------GA--GUG-UGG-C-GG--A-CGGCUGAGU---AAC-ACGUGGC-UAA--CCU-AC-CCUCGGGA-CG--GGGAU-AA-CCCCG-G-GAAA-CUG-GGG-AUAAUCCC-C-GAU-A------G-GGA-A--G-GA--GUC-------------------------------------------------------------------------------------------CUG-GAAU-----------------------------------------------------------------------------------GGU--U-C--C--UU-CCC-UAAA-GGG-C-UA-U----A-GGC-----UAUUUCCC-----GU--UU---GUAG-CC-G--C----------CC----------GAGG---AUG-G-GGCUACGG-CCC--A------UC-A-G-GC-U-G---UCGGUG-GG-G-UAAA-GG-CCCACCGA-ACCU-AUA-ACGGGUAGGGGCCGU-G-GA-------------A-GCGG-GAGC-CUCCAGUUGGGCA-CUGA-GA-CAAG-GGCCCAG-GCC-C-UACG--GGGC-GC-A-CC-A-G-GCGCG-AAACGUCCC--------------------CAAU-GCGC-GAAA-GCGUGAGGGCGCUACCCCGAG-UGC-CU-C-----C-------GC-AA------G--G-------------------------AGGCUUUU-CC-CCGC-U-------------------------------C-----U-AA-AA----A--------------------------G-G-CG--G-GGG---------AA-UAAGC-GGGGGGCAAGU-CUGGU---GUCAGCCGCCG-CGGUAAU-AC-CAGC-UCCGCG-A-GUG-GUCGG-GGUGAUUACUGGGCCUAAAGCGCCUG-UAG-C-CGGCCC-ACCAAG-UCGC-CCCUU-AAA-GU-CCCCGG-CUC-AA-CCGGGG-AAC-U-------------------------------------------GG-G-G----------------------------------------------GCGA-UAC-UGGUG-GGC-U-A-G-GG-GG-----CGGGAG-AGGCG-GGG-GGUACU-CCC--------------------GGA-GUA-GGG-GCGAAA-UC-C-UUAGAU-ACCGGGAGG-ACC-A-CCAG--U-G-GCGGAAGCGC--CCCGCUA------GAACG--------------------------------------------------------------CGC-CC--GACG-----GUGA-GA--GGCGAAA-G-C-CGGGG-CAGC-AAACGGG-AUUAGAUAC-----CCCGGUAG-UCCCG-GCUGUAAACGAUG-CGGG-CUAGGUG-UCGAGUAG--GC-UUAGA--------------------------------GCC-UACUCGG-UGCC-GCA-GGGAAGCCGU-UAA-GCCC-GCCGCCUG-GGGAGUACGGUC-GCAA-GACU-GAA-ACUU-AAA-GGAAUUG-GCGGGGG-AGC--ACCA--CA-A-GGG-GUGGAA-CC-UGCGGC-UCAAUUG-G-AGUCAACG-CCUGG-AA-UCUUA-CCGGGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACCGC-AGUAUGACGGCCAGGCUAACGACCUUGCC-UGA-CUCGCGGAGAGGA-GGUGCAUGGCCGUCGCCA-GCUCGUGUU-GUGA-AAUGU-CCGG-UUAA-GU-CCGGCAAC-GAGCGAGACC-CCCA-CC--CCUAG---U-U-GG-U-AU-UC--U--GGAC--------------------------UCCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUC---C-AGAAC-CACA-C-U-AGG-GGGAC-U-GCCG-GC-G---UAA-GCC-G--GAGG-A-AGG-A-GGGG-GCCACGGC--AGGUCAGCAU-G-CC-CCGAAAC--UC-C-C-GGGCCGCACGCGGGUUACAAUGG-CAGGGA--C-AAC-GGGA-U-GC-U-A-C-CUCG-AA-AGGG-G-----------GA-G-CCAA-UC--CU-U-AAACCCU-GCC-GCAGUUGGGA-UCGAGGGC-U-GAAACCC-GCCCUCG-UGAACGAGGAAU-CCCUAGUA-ACCGC-GGG-UC-AAC-AA-CCCGCGGUG-AAU-ACGUC-CCUGCUCCUUGCA----CACACCGCCCGUC-GCU--CCACCCGA-GCGCGAAAGGGGU-GA-G-GUCC-C-U-U-GC----G-----------------------------------AUA-----------------------------------------A-GU-G-GGGGAU-CGAACUCCUUUCCCG-CG-AGG-GGGGAG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCA-------------------------------------------------------------------------------------------
+>MtsKandl Methanopyrus kandleri
+--------------------------------------ACUCCGGUU-GAU-CCUGCCGGAGGCC-ACC-GC-UAUC-GGG-GUCC--GACUAAGCCAU-GCAAGU-CGA-GGGC-CG-------------------------------------------------------CCC--------------------------------GGCAAUGG--------------------------------GGG---------------------------------------------------------CG--GCC-CGG-C-GG--A-CGGCUCAGU---AAC-ACGUGGG-UAA--CCU-AC-CCUCGGGA-CG--GGGAU-AA-CCCCGGC-GAAA-GUG-GGG-CUAAUCCC-C-GAU-A------G-GCG-G--G-GC--GGC-------------------------------------------------------------------------------------------CUG-GAAC-----------------------------------------------------------------------------------GGU--C-C--U--CC-GCC-GAAA--GG-G-CC-C----G-GGC------CCAUGCC-----GC--CC---GGGU-CC-G--C----------CC----------GAGG---AUG-G-GCCUGCGG-CCG--A------UU-A-G-GU-A-G---UUGGCG-GG-G-UAAC-GG-CCCGCCAA-GCCG-AUA-AUCGGUACGGGCGGU-G-AG-------------A-GCCG-GAGC-CCGGAGACGGGGA-CUGA-GA-CAAG-GCCCCGG-GCC-C-UACG--GGGC-GC-A-GC-A-G-GCGCG-AAACCUCCG--------------------CAAU-GCGG-GCAA-CCGCGACGGGGGGACCCCGAG-UGC-CG-U-----C-GGGG--CAAAG-CC-CCG--G-------------------------CGGCUGUA-CC-GGGG-U-------------------------------G-----U-AA-AA----A--------------------------G-C-CC--C-GGG-------U-AG-AAAGC-GGCGGGCAAGA-CCGCU---GCCAGCCGCCG-CGGUAAU-AG-CGG-CGCCGCA-A-GUG-GUGGC-CGCUUUUAUUGGGCCUAAAGGGGCCG-UAG-C-CGGUCC-CGUGGG-UCCC-CGCCG-AAA-GC-CCGCGG-CUU-AA-CCGCGG-GAGUC-------------------------------------------GG-C-G----------------------------------------------GGGA-AAC-UGCGG-GAC-U-U-G-GG-AC-----CGGGAG-AGGCC-GGA-GGUACC-CCC--------------------GGG-GUA-GGG-GUGAAA-UC-C-UGUCAU-CCCGGGGGG-ACC-G-CCAG--U-G-GCGAAGGCGU--CCGGCUG------GAACG--------------------------------------------------------------GGU-CC--GACGG-----UGA-GG--GCCGAAA-G-C-CGGGG-GAGC-AAACCGG-AUUAGAUAC-----CCGGGUAG-UCCCG-GCUGUAAACGAUG-CGGA-CUAGGUG-UUGGGGCG--GC-CACGA--------------------------------GCC-GCCCCAG-UGCC-GUA-GGGAAGCCGU-UAA-GUCC-GCCGCCUG-GGGAGUACGGCC-GCAA-GGCU-GAA-ACUU-AAA-GGAAUUG-GCGGGGG-AGC--ACCA--CA-A-CCG-GUGGAG-CC-UGCGGU-UUAAUUG-G-AUUCAACG-CCGGA-AA-CCUUA-CCGGGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACAGC-AGGAUGAAGGCCAGGUUGACGACCUUGCC-GGA-CGAGCUGAGAGGA-GGUGCAUGGCCGCCGUCA-GCUCGUGCC-GUGA-GGUGU-CCUG-UUAA-GU-CAGGUAAC-GAGCGAGACC-CCCG-CC--CGCAG---U-U-GC-C-AG-CG--G--GCCCC-------------------------GUAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGG---CGCCGGG-CACU-C-U-GCG-GGGAU-C-GCCG-CC-G-U-UAA-GGC-G--GAUG-A-AAG-U-GGGG-GCGACGGC--AGGUCCGUAU-G-CC-CCGAAAC--CC-C-C-GGGCUACACGCGGGCUACAAUGG-CGGGGA--C-AAU-GGGA-U-CC-G-A-C-CCCG-AA-AGGG-G-----------GA-G-GAAA-UCC-CC-U-AAACCCC-GUC-GUAGUUCGGA-UUGCGGGC-U-GCAACUC-GCCCGCA-UGAAGGUGGAAU-CGGUAGUA-ACCGU-GCC-UC-AGA-AU-GGCACGGUG-AAU-ACGUC-CCUGCUCCUUGCA----CACACCGCCCGUC-ACG--CCACCCGA-GCCCCCCGGGGGC-AA-G-CCCC-C-G-G-UC----C-----------------------------------GCA-A---------------------------------------G-GG-C-UGGGGG-CGAGCCCCCGGGGGG-UG-AGG-GGGGCG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCC-------------------------------------------------------------------------------------------
+>ArcFulg2 Archaeoglobus fulgidus
+--------------------------------------AUUCUGGUU-GAU-CCUGCCAGAGGCC-GCU-GC-UAUC-CGG-CUGG--GACUAAGCCAU-GCGAGU-CAA-GGGG-CU---UGU-----------------------------------------------AUCCC----------------------------------UUCG----------------------------------GGGAU--------------------------------------------------GCA--AG--CAC-CGG-C-GG--A-CGGCUCAGU---AAC-ACGUGGA-CAA--CCU-GC-CCUCGGGU-GG--GGGAU-AA-CCCCG-G-GAAA-CUG-GGG-CUAAUCCC-C-CAU-A------G-GGG-A--U-GG--GUA-------------------------------------------------------------------------------------------CUG-GAAU-----------------------------------------------------------------------------------GUC--C-C--A--UC-UCC-GAAA--GC-----------------------GCUUA--------------------GC-G--C----------CC----------GAGG---AUG-G-GUCUGCGG-CGG--A------UU-A-G-GU-U-G---UUGGUG-GG-G-UAAC-GG-CCCACCAA-GCCG-AAG-AUCCGUACGGGCCAU-G-AG-------------A-GUGG-GAGC-CCGGAGAUGGACC-CUGA-GA-CACG-GGUCCAG-GCC-C-UACG--GGGC-GC-A-GC-A-G-GCGCG-AAACCUCCG--------------------CAAU-GCGG-GAAA-CCGCGACGGGGUCAGCCGGAG-UGC-UC-G-----C-GC----AU-C-----GCG--C-------------------------GGGCUGUC-GG-GGUG-C-------------------------------C-----U-AA-AA----A--------------------------G-C-AC--C-CCA-------C-AG-CAAGG-GCCGGGCAAGG-CCGGU---GGCAGCCGCCG-CGGUAAU-AC-CGG-CGGCCCG-A-GUG-GCGGC-CACUUUUAUUGGGCCUAAAGCGUCCG-UAG-C-CGGGCU-GGUAAG-UCCU-CCGGG-AAA-UC-UGGCGG-CUU-AA-CCGUCA-GAC-UG------------------------------------------CC-G-G----------------------------------------------AGGA-UAC-UGCCA-GCC-U-A-G-GG-AC-----CGGGAG-AGGCC-GGG-GGUAUU-CCC--------------------GGA-GUA-GGG-GUGAAA-UC-C-UGUAAU-CCCGGGAGG-ACC-A-CCUG--U-G-GCGAAGGCGC--CCGGCUG------GAACG--------------------------------------------------------------GGU-CC--GACGG-----UGA-GG--GACGAAG-G-C-CAGGG-GAGC-GAACCGG-AUUAGAUAC-----CCGGGUAG-UCCUG-GCUGUAAACGAUG-CGGA-CUAGGUG-UCACCGAA--GC-UACGA--------------------------------GCU-UCGGUGG-UGCC-GGA-GGGAAGCCGU-UAA-GUCC-GCCGCCUG-GGGAGUACGGCC-GCAA-GGCU-GAA-ACUU-AAA-GGAAUUG-GCGGGGG-AGC--ACUA--CA-A-CGG-GUGGAG-CC-UGCGGU-UUAAUUG-G-AUUCAACG-CCGGG-AA-GCUUA-CCGGGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACAGC-GGGAUGAAGGUCGGGCUGAAGACCUUACC-AGA-CUAGCUGAGAGGU-GGUGCAUGGCCGCCGUCA-GUUCGUACU-GUGA-AGCAU-CCUG-UUAA-GU-CAGGCAAC-GAGCGAGACC-CGCG-CC--CCCAG---U-U-GC-C-AG-CG--G--UUCCC-------------------------UUCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGA---AGCCGGG-CACA-C-U-GGG-GGGAC-U-GCCG-GC-G-C-UAA-GCC-G--GAGG-A-AGG-U-GCGG-GCAACGGC--AGGUCCGUAU-G-CC-CCGAAUC--CC-C-C-GGGCUACACGCGGGCUACAAUGG-CCGGGA--C-AAU-GGGU-A-CC-G-A-C-CCCG-AA-AGGG-G-----------UA-G-GUAA-UCC-CC-U-AAACCCG-GUC-UAACCUGGGA-UCGAGGGC-U-GCAACUC-GCCCUCG-UGAACCUGGAAU-CCGUAGUA-AUCGC-GCC-UC-AAA-AU-GGCGCGGUG-AAU-ACGUC-CCUGCUCCUUGCA----CACACCGCCCGUC-AAG--CCACCCGA-GUGGGCCAGGGGC-GA-G-GGGG-U-G-G-CC----------------------------------------CUA-------------------------------------------GG-C-CACCUU-CGAGCCCAGGGUCCG-CG-AGG-GGGGCU-AAGUCGUAACAAGGUAGCCGUAGGGGAAUCUG-CGGC-UGGAUCACCUCCU------------------------------------------------------------------------------------------
+>TesCeler Thermococcus celer
+--------------------------------------AUUCCGGUU-GAU-CCUGCCGGAGGCC-ACU-GC-UAUG-GGG-GUCC--GACUAAGCCAU-GCGAGU-CAU-GGGG-CG---------------------------------------------------------C----------------------------------CUUGC---------------------------------G-----------------------------------------------------------CG--CAC-CGG-C-GG--A-CGGCUCAGU---AAC-ACGUCGG-UAA--CCU-AC-CCUCGGGA-GG--GGGAU-AA-CCCCG-G-GAAA-CUG-GGG-CUAAUCCC-C-CAU-A------G-GCC-U--G-AG--GUA-------------------------------------------------------------------------------------------CUG-GAAG-----------------------------------------------------------------------------------GUC--C-U--C--AG-GCC-GAAA-GGG-G-C-------------------UCU-------------------GC-CC-G--C----------CC----------GAGG---AUG-G-GCCGGCGG-CCG--A------UU-A-G-GU-A-G---UUGGUG-GG-G-UAAC-GG-CCCACCAA-GCCG-AAG-AUCGGUACGGGCCAU-G-AG-------------A-GUGG-GAGC-CCGGAGAUGGACA-CUGA-GA-CACG-GGUCCAG-GCC-C-UACG--GGGC-GC-A-GC-A-G-GCGCG-AAACCUCCG--------------------CAAU-GCGG-GCAA-CCGCGACGGGGGGACCCCCAG-UGC-CG-U-----G-GC----AA-C-----GCC--A-------------------------CGGCUUUU-CC-GGAG-U-------------------------------G-----U-AA-AA----A--------------------------G-C-UC--C-GGG---------AA-UAAGG-GCUGGGCAAGG-CCGGU---GGCAGCCGCCG-CGGUAAU-AC-CGG-CGGCCCG-A-GUG-GUGGC-CGCUAUUAUUGGGCCUAAAGCGUCCG-UAG-C-CGGGCC-CGUAAG-UCCC-UGGCG-AAA-UC-CCACGG-CUC-AA-CCGUGG-GGCUU-------------------------------------------GC-U-G----------------------------------------------GGGA-UAC-UGCGG-GCC-U-U-G-GG-AC-----CGGGAG-AGGCC-GGG-GGUACC-CCU--------------------GGG-GUA-GGG-GUGAAA-UC-C-UAUAAU-CCCAGGGGG-ACC-G-CCAG--U-G-GCGAAGGCGC--CCGGCUG------GAACG--------------------------------------------------------------GGU-CC--GACGG-----UGA-GG--GACGAAG-G-C-CAGGG-GAGC-GAACCGG-AUUAGAUAC-----CCGGGUAG-UCCUG-GCUGUAAAGGAUG-CGGG-CUAGGUG-UCGGGCGA--GC-UUCGA--------------------------------GCU-CGCCCGG-UGCC-GAA-GGGAAGCCGU-UAA-GCCC-GCCGCCUG-GGGAGUACGGCC-GCAA-GGCU-GAA-ACUU-AAA-GGAAUUG-GCGGGGG-AGC--ACUA--CA-A-GGG-GUGGAG-CG-UGCGGU-UUAAUUG-G-AUUCAACG-CCGGG-AA-CCUCA-CCGGGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACGGC-AGGAUGAAGGCCAGGCUGAAGGUCUUGCC-GGA-CACGCCGAGAGGA-GGUGCAUGGCCGCCGUCA-GCUCGUACC-GUGA-GGCGU-CCAC-UUAA-GU-GUGGUAAC-GAGCGAGACC-CGCG-CC--CCCAG---U-U-GC-C-AG-UC--C--UUCCC-------------------------GCU--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGG---A-GGAGG-CACU-C-U-GGG-GGGAC-C-GCCG-GC-G-A-UAA-GCC-G--GAGG-A-AGG-A-GCGG-GCGACGGU--AGGUCAGUAU-G-CC-CCGAAAC--CC-C-C-GGGCUACACGCGCGCUACAAUGG-GCGGGA--C-AAU-GGGA-U-CC-G-A-C-CCCG-AA-AGGG-G-----------AA-G-GGAA-UCC-CC-U-AAACCCG-CCC-CCAGUUCGGA-UCGCGGGC-U-GCAACUC-GCCCGCG-UGAAGCUGGAAU-CCCUAGUA-CCCGC-GUG-UC-AU-CAU-CGCGCGGCG-AAU-ACGUC-CCUGCUCCUUGCA----CACACCGCCCGUC-ACU--CCACCCGA-GCGGGGUCCGGAU-GA-G-GCCU-G-A-U-CU----CCC---------------------------------UUC-G-------------------------------------GGG-AG-G-UCGGGU-CGAGUCUGGGCUCCG-UG-AGG-GGGGAG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUA-CGGC-UCGAUCACCUCCU------------------------------------------------------------------------------------------
+>MosFervi Methanothermus fervidus
+--------------------------------------ACUCCGUUU-GAU-CCUGGCGGAGGCC-ACU-GC-UAUG-GGG-GUCC--GACUAAGCCAU-GCAAGU-CGA-ACGG-GC--------------------------------------------------------------------------------------------CUUGU---------------------------------------------------------------------------------------------GC--CCG-UGG-C-GA--A-CGGCUCAGU---AAC-ACGUGGA-CAA--CCU-AC-CCUGGGGU-CC--GGGAU-AA-CCCCG-G-GAAA-CUG-GGG-CUAAUCCC-G-GAU-A------G-GCG-A--G-GU--CUC-------------------------------------------------------------------------------------------CUG-GAAU-----------------------------------------------------------------------------------GGG--G-C--C--UC-GCC-GAAA--GG-U-C-------------------UUUU------------------GA-CC-G--C----------CC----------CAGG---AUG-G-GUCUGCGG-CCG--A------UU-A-G-GU-A-G---UUGGUA-GG-G-UAAC-GG-CCUACCAA-GCCU-ACG-AUCGGUACGGGUUGU-G-AG-------------A-GCAA-GAGC-CCGGAGACGGGGC-CUGA-GA-CAAG-GCCCCGG-GCC-C-UACG--GGGC-GC-A-GC-A-G-GCGCG-AAAACUCCG--------------------CAAU-GCGC-GAAA-GCGCGACGGGGGGACCCCCAG-UGC-CA-C-----U-CC----GU-AA----GGA--G-------------------------UGGCUUUU-CC-GGAG-U-------------------------------G-----U-AA-AA----A--------------------------G-C-UC--C-GGG---------AA-UAAGG-GCUGGGCAAGA-CCGGU---GCCAGCCGCCG-CGGUAAC-AC-CGG-CAGCCCG-A-GUG-GUGGC-CGCGUUUAUUGGGCCUAAAGCGUCCG-UAG-C-CGGUCC-GGUAAG-UCUC-CGGUG-AAA-GC-CCGCAG-CUC-AA-CUGCGG-GAGUA-------------------------------------------GC-C-G----------------------------------------------GAGA-UAC-UGCCG-GAC-U-U-G-GG-GC-----CGGGAG-AGGCC-GGA-GGUACC-CCC--------------------GGG-GUA-GGG-GUGAAA-UC-C-UGUAAU-CCCGGGGGG-ACC-A-CCUG--U-G-GCGAAGGCGU--CCGGCUG------GAACG--------------------------------------------------------------GGC-CC--GACGG-----UGA-GG--GACGAAA-G-C-CAGGG-GAGC-GAACCGG-AUUAGAUAC-----CCGGGUAG-UCCUG-GCCGUAAACGAUG-CGGA-CUUGGUG-UUGGGGCA--AC-CUCGA--------------------------------GUU-GCCCCAG-UGCC-GAA-GGGAAGCCGU-UAA-GUCC-GCCGCCUG-GGGAGUACGGCC-GCAA-GGCU-GAA-ACUU-AAA-GGAAUUG-GCGGGGG-AGC--ACCA--CA-A-CGC-GUGGAG-CC-UGCGGU-UUAAUUG-G-AUUCAACG-CCGGA-CA-CCUCA-CCGGGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACGGC-AGGAUGAUGGCCAGGUUGAUGACCUUGCC-UGA-CGAGCCGAGAGGA-GGUGCAUGGCCGCCGUCA-GCUCGUACC-GUGA-GGCGU-CCUG-UUAA-GU-CAGGCAAC-GAGCGAGACC-CGCG-CC--CCUAG---U-U-GC-C-AG-CG--G--GUCCC-------------------------GUAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGA---CGCCGGG-CACA-C-U-AGG-GGGAC-C-GCCA-GC-G-A-UAA-GCU-G--GAGG-A-AGG-U-GCGG-GCGACGGU--AGGUCCGUAU-G-CC-CCGAAAC--CC-C-C-GGGCUACACGCGGGCUACAAUGG-CCGGGA--C-AAU-GGGU-A-CC-G-A-C-CCCG-AA-AGGG-G-----------GA-G-GUAA-UCC-CA-U-AAACCCG-GCC-GUAGUUCGGA-UCGAGGGC-U-GCAACUC-GCCCUCG-UGAAGCUGGAAU-GCGUAGUA-AUCGC-GGG-UC-ACU-AU-CCCGCGGUG-AAU-ACGUC-CCUGCUCCUUGCA----CACACCGCCCGUC-ACG--CCACCCAA-ACGGGGUUCGGAU-GA-G-GCCA-U-G-G-CC----------------------------------------UCU-------------------------------------------GG-C-CAUGGU-CGAAUCCGGGCCCCG-UG-AGG-AGGGCG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCCU------------------------------------------------------------------------------------------
+>TheAcido Thermoplasma acidophilum
+--------------------------------------ACUCCGGUC-GAU-CCUGCCGGCGGUC-ACU-GC-UAUC-AGG-UUCC--GACUAAGCCAU-GCAAGU-CAU-GGGG-CC--------------------------------------------------------------------------------------------GUAA----------------------------------------------------------------------------------------------GG--CAC-CGG-C-GA--A-CAGCUCAGU---AAC-ACGUGGA-UAA--UUU-AC-CCUCAGGC-GG--GGCAU-AA-CCUCG-G-GAAA-CUG-AGG-CUAAUUCC-C-CAU-A------G-UCA-U--U-AC-AAAC--------------------------------------------------------------------------------------------UG-GAAU-----------------------------------------------------------------------------------GGUU-G-U--A--AU-GAU-GAAA--GC-----------------------UUCU---------------------GC-A--C----------CU----------GAGG---AUA-A-GUCUGCGG-CCU--A------UC-A-G-GU-A-G---UAGGUG-GU-G-UAAA-GG-ACCACCUA-GCCU-AAG-ACGGGUACGGGCCCU-G-AA-------------A-GGGG-GAGC-CCGGAGAUGGACU-CUGA-GA-CAAC-AGUCCAG-GCC-C-UACG--GGGC-GC-A-GC-A-G-GCGCG-AAAACUGUG--------------------CAAU-GCGC-GAAA-GCGCGACACGGGGAGCCUGAG-UGC-CU-U-----G-AC----UUUUU----GUC--A-------------------------AGGCUUUU-CU-GAUG-C-------------------------------C-----U-AA-AA----A--------------------------G-C-AU--C-AGG---------AA-UAAGG-GCUGGGCAAGA-CGGGU---GCCAGCCGCCG-CGGUAAC-AC-CCG-CAGCUCG-A-GUG-GUGAU-CACUUUUAUUGAGUCUAAAGCGUUCG-UAA-C-CGGUCU-UAUAAA-UCUU-CAGAU-AAA-UU-CUUCCG-CUU-AA-CGGAAG--AACU-------------------------------------------UC-U-G----------------------------------------------AAGA-GAC-UGUAA-GAC-U-U-G-GG-AC-----CGGGUG-AGGUU-GAA-UGUACU-UUC--------------------AGG-GUA-GGG-GUAAAA-UC-C-UGUAAU-CCUGAAAGG-ACG-A-CCGG--U-G-GCGAAAGCGU--UCAACUA------GAACG--------------------------------------------------------------GAU-CC--GACGG-----UGA-GG--GACGAAG-G-C-UAGGG-GAGC-AAACCGG-AUUAGAUAC-----CCGGGUAG-UCCUA-GCUGUAAACGCUG-CCCA-CUUGGUG-UUGCUUCU--CCGUU-GA--------------------------------GGG-GGGGCAG-UGCC-GUA-GCGAAGGUGU-UAA-GUGG-GUCACUUG-GGGAGUACGGCC-GCAA-GGCU-GAA-ACUU-AAA-GGAAUUG-GCGGGGG-AGC--ACCG--CA-A-CGG-GAGGAG-CG-UGCGGU-UUAAUUG-G-AUUCAACG-CCGGA-AA-ACUCA-CCGGGAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACCUU-CGGAUGAGGGUCAACCUGACGAAUUUACC-CGA-UAGAAGGAGAGGU-GGUGCAUGGCCGUCGUCA-GCUCGUACC-GUAG-GGCGU-UCAC-UUAA-GU-GUGAUAAC-GAGCAAGACC-CCCA-UC--UCUAA---U-U-GC-C-AG-AC--U--GUCU--------------------------UUGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGG---C-AGAGG-CACU-U-U-AGA-GGGAC-C-GCCA-GC-G-C-UAA-GCU-G--GAGG-A-AGG-A-GGGG-UCGACGGC--AGGUCAGUAC-G-CC-CCGAAUC--UC-C-C-GGGCUACACGCGCGCUACAAAGG-ACGGGA--C-AAU-GAGU-U-GC-A-A-C-CUCG-AA-AGGG-G-----------AA-G-CUAA-CCU-CG---AAACCCG-UUC-GUAGUCAGGA-CUGAGGGC-U-GUAACUC-GCCCUCA-CGAAUGUGGAUU-CCGUAGUA-AUCGU-AGG-UC-AAC-AG-CCUACGGUG-AAU-AUGCC-CCUGCUCCUUGCA----CACACCGCCCGUC-AAA--CCAUCCGA-GCUGGUGUUGGAU-GA-G-GGUC-C-G-U-CC----------------------------------------UCU-------------------------------------------GG-A-UGGAUU-CGAAUCUGAUGUCAG-UG-AGG-AGGGUU-AAGUCGUAACAAGGUAUCCGUAGGGGAACCUG-CGGA-UGGAUCACCUCC-------------------------------------------------------------------------------------------
+>MnmHunga Methanospirillum hungatei
+--------------------------------------AUUCUGNUU-GAU-CCUGCCAGAGGCC-ACU-GC-UAUC-GGG-GUUU--GACUAAGCCAU-GCGAGU-CGA-GAGG-U---------------------------------------------------------------------------------------------GCAAG----------------------------------------------------------------------------------------------A--CCU-CGG-C-GU--A-CUGCUCAGU---AAC-ACGUGGA-CAA--UCU-GC-CCUGAAGA-GG--AGGAU-AA-UCCCG-G-GAAA-CUG-GGG-GUAAUACU-C-CAU-A------G-UUC-G--U-GC-UGAC--------------------------------------------------------------------------------------------UG-GAAU-----------------------------------------------------------------------------------GUU--A-U--G--CG-AAC-GAAA--GA-----------------------UCCG---------------------UC-G--C----------UU----------CAGG---AUG-A-GUCUGCGG-CCG--A------UU-A-G-GU-A-G---UUGUUG-GG-G-UAAC-GG-CCCAACAA-GCCU-GUC-AUCGGUACGGGUUGU-G-GG-------------A-GCAA-GAGC-CCGGAGAUGGAUU-CUGA-GA-CACG-AAUCCAG-GCC-C-UACG--GGGC-GC-A-GC-A-G-GCGCG-AAAACUUUA--------------------CCAU-GCGG-GCAA-CCGUGAUAAGGAAACCCCGAG-UGC-CA-G-----C-------AC-AG------G--C-------------------------UGGCUGUC-CA-CCAG-U-------------------------------G-----U-AA-AU----A--------------------------A-C-UG--G-UGA---------AG-AAAGG-GCCGGGCAAGA-CCGGU---GCCAGCCGCCG-CGGUAAU-AC-CGG-CGGCUCG-A-GUG-GUGGC-CGCUAUUACUGGGCUUAAAGGGUCCG-UAG-C-UGGAUA-UACAAG-UCCC-UUGAG-AAA-UC-CGCCGG-CUU-AA-CCGGUG-GGCGU-------------------------------------------UC-A-G----------------------------------------------GGGA-AAC-UGUAU-UUC-U-A-G-GG-AC-----CGGGAG-AGGUG-AGA-GGUACU-GCC--------------------GGG-GUA-GGA-GUGAAA-UC-C-UGUAAU-CCCGGUGGG-ACC-A-CCUA--U-G-GCGAAGGCAU--CUCACCA------GAACG--------------------------------------------------------------GGU-CC--GACAG-----UGA-GG--GACGAAA-G-C-UGGGG-GAGC-AAACCGG-AUUAGAUAC-----CCGGGUAG-UCCCA-GCUGUAAACGAUG-CGCG-UUAGGUG-UGUCAGUG--AC-CACGU--------------------------------GUC-ACUGAGG-UGCC-GAA-GGGAAACCGU-GAA-ACGC-GCCGCCUG-GGGAGUACGGUC-GCAA-GGCU-GAA-ACUU-AAA-GGAAUUG-GCGGGGG-AGC--ACCA--CA-A-CGG-GUGGAG-CC-UGCGGU-UUAAUCG-G-ACUCAACG-CCGGA-AA-UCUCA-CCGGAUA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACAGC-UGAAUGAUAGUCGGGAUGAAGACUCUACU-UGA-CUAGCUGAGAGGA-GGUGCAUGGCCGUCGUCA-GUUCGUACU-GUGA-AGCAU-CCUG-UUUA-GU-CAGGCAAC-GAGCGAGACC-CACG-CG--AGCAG---U-U-GC-C-AG-CU--U--GACC--------------------------UUCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGU---UGAUGGG-GACA-C-U-GCU-CGGAC-C-GCCU-CU-G-C-UAA-AGG-G--GAGG-A-AGG-A-AUGG-GCAACGGU--AGGUCAGCAU-G-CC-CCGAAUU--AU-C-C-GGGCUACACGCGGGCUACAAUGG-ACAGGA--C-AAU-GGGU-U-UC-G-A-C-ACCG-AG-AGGU-G-----------AG-G-AUAA-UCU-CC-U-AAACCUG-UCC-GAAGUUCGGA-UUGCGGGU-U-GUAACUC-ACCCGCA-UGAAGCUGGAAU-CCGUAGUA-AUCGC-GUU-UC-AAC-AU-AGCGCGGUG-AAU-AUGUC-CCUGCUCCUUGCA----CACACCGCCCGUC-AAA--CCACCCGA-GUGAGGUCUUGAU-GA-G-GAUG-U-A-U-C-----------------------------------------AUU--------------------------------------------G-A-UAUGUU-CGAAUCUGGGUUUUG-CA-AGG-GGGGUU-AAGUCGUAACAAGGUAGCCGUAGGGGAAUCUG-CGGC-UGGAUCACCUCCU------------------------------------------------------------------------------------------
+>MtaFris2 Methanosarcina frisius
+--------------------------------------AUUCUGGUU-GAU-CCUGCCAGAGGUU-ACU-GC-UAUC-GGU-GUUC--GCCUAAGCCAU-GCGAGU-CAU-AUGU-A---------------------------------------------------------------------------------------------GCAA-----------------------------------------------------------------------------------------------U--ACA-UGG-C-GU--A-CUGCUCAGU---AAC-ACGUGGA-UAA--CCU-GC-CCUUGGGA-CC--GGCAU-AA-CCCCG-G-GAAA-CUG-GGG-AUAAUUCC-G-GAU-A------A-CGC-A--U-AU-UUGC--------------------------------------------------------------------------------------------UG-GAAU-----------------------------------------------------------------------------------GCU--U-U--A--UG-CGU-CAAA-AGG-A---------------------UUCG-------------------U-CU-G--C----------CC----------AAGG---AUG-G-GUCUGCGG-CCU--A------UC-A-G-GU-A-G---UAGUGG-GU-G-UAAU-GU-ACCUACUA-GCCA-GCG-ACGGGUACGGGUUGU-G-AG-------------A-GCAA-GAGC-CCGGAGAUGGAUU-CUGA-GA-CAUG-AAUCCAG-GCC-C-UACG--GGGC-GC-A-GC-A-G-GCGCG-AAAACUUUA--------------------CAAU-GCGG-GAAA-CCGUGAUAAGGGGACACCGAG-UGC-CA-G-----C-AU----CA-U-----AUG--C-------------------------UGGCUGUC-CG-GAUG-U-------------------------------G-----U-AA-AA----U--------------------------A-C-AU--C-CGU-------U-AG-CAAGG-GCCGGGCAAGA-CCGGU---GCCAGCCGCCG-CGGUAAC-AC-CGG-CGGCCCG-A-GUG-GUGAU-CGUGAUUAUUGGGUCUAAAGGGUCCG-UAG-C-CGGUUU-GGUCAG-UCCU-CCGGG-AAA-UC-UGAUAG-CUC-AA-CUAUUA-GGCUU-------------------------------------------UC-G-G----------------------------------------------GGGA-UAC-UGCCA-GAC-U-U-G-GA-AC-----CGGGAG-AGGUA-AGA-GGUACU-ACA--------------------GGG-GUA-GGA-GUGAAA-UC-U-UGUAAU-CCCUGUGGG-ACC-A-CCUG--U-G-GCGAAGGCGU--CUUACCA------GAACG--------------------------------------------------------------GGU-UC--GACGG-----UGA-GG--GACGAAA-G-C-UGGGG-GCAC-GAACCGG-AUUAGAUAC-----CCGGGUAG-UCCCA-GCCGUAAACGAUG-CUCG-CUAGGUG-UCAGGCAU--GG-CGCGA--------------------------------CCG-UGUCUGG-UGCC-GCA-GGGAAGCCGU-GAA-GCGA-GCCACCUG-GGAAGUACGGCC-GCAA-GGCU-GAA-ACUU-AAA-GGAAUUG-GCGGGGG-AGC--ACAA--CA-A-CGG-GUGGAG-CC-UGCGGU-UUAAUUG-G-ACUCAACG-CCGGA-CA-ACUCA-CCGGGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACAGC-AAUAUGUAGGCCAAGCUGAAGACUUUGCC-UGA-AUCGCUGAGAGGA-GGUGCAUGGCCGUCGCCA-GUUCGUACU-GUGA-AGCAU-CCUG-UUAA-GU-CAGGCAAC-GAGCGAGACC-CGUG-CC--CACUG---U-U-AC-C-AG-CA--U--GUCC--------------------------UCCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGA---CGAUGGG-UACU-C-U-GUG-GGGAC-C-GCCG-AU-G-U-UAA-AUC-G--GAGG-A-AGG-U-GCGG-GCCUCGGU--AGGUCAGUAU-G-CC-CCGAAUC--UC-C-C-GGGCUACACGCGGGCUACAAUGG-AUGGGA--C-AAU-GGGU-C-CC-U-C-C-CCUG-AA-AAGG-G-----------CU-G-GUAA-UCU-CA-C-AAACCCA-UUC-GUAGUUCGGA-UCGAGGGC-U-GUAACUC-GCCCUCG-UGAAGCUGGAAU-CCGUAGUA-AUCGC-GUU-UC-AAU-AU-AGCGCGGUG-AAU-ACGUC-CCUGCUCCUUGCA----CACACCGCCCGUC-AAA--CCACCCGA-GUGAGGUAUGGGU-GA-G-GGCA-C-G-G-AC----------------------------------------UUC-------------------------------------------GUGC-CGUGUU-CGAACCUGUGCUUUG-CA-AGG-GUGGUU-AAGUCGUAACAAGGUAGCCGUAGGGGAAUCUG-CGGC-UGGAUCACCUCCU------------------------------------------------------------------------------------------
+>HaoSodom Halobacterium sodomense
+--------------------------------------AUUCCGGUU-GAU-CCUGCCGGAG--C-AUU-GC-UAUU-GGG-AUCC--GAUUUAGCCAU-GCUAGU-CGC-ACGA-GU--------------------------------------------------------------------------------------------UCAC----------------------------------------------------------------------------------------------AC--UCG-UGG-C-GA--A-UAGCUCAGU---AAC-ACGUGGC-CAA--ACU-AC-CCUUCGGA-AC--ACAAU-AC-CCUCG-G-GAAA-CUG-AGG-CUAAUAGU-G-UAU-C------C-CAU-A--C-CA-CCAC--------------------------------------------------------------------------------------------UG-GAAU-----------------------------------------------------------------------------------GAG--U-G--G--UA-UGC-CAAA-CGC-----------------------UCCG---------------------GC-G--C----------CG----------AAGG---AUG-U-GGCUGCGG-CCG--A------UU-A-G-GU-A-G---ACGGUG-GG-G-UAAC-GG-CCCACCGU-GCCA-AUA-AUCGGUACGGGUCAU-G-AG-------------A-GUGA-GAAC-CCGGAGACGGAAU-CUGA-GA-CAAG-AUUCCGG-GCC-C-UACG--GGGC-GC-A-GC-A-G-GCGCG-AAACCUUUA--------------------CACU-GCAC-GACA-GUGGAUUAGGGGGAUCCCAAG-UGC-AC-A-----G-GC----AUAGC----GCC--U-------------------------GUGCUUUU-CG-GCAC-C-------------------------------C-----U-AA-GG----C--------------------------G-G-UG--C-CAG---------AA-UAAGG-GCUGGGCAAGA-CCGGU---GCCAGCCGCCG-CGGUAAU-AC-CGG-CAGCCCA-A-GUG-AUGGC-CGAUCUUAUUGGGCCUAAAGCGUCCG-UAG-C-UGGCCG-CGCAAG-UCCA-UCGGG-AAA-UC-CACCUG-CUC-AA-CAGGUG-GGCGC-------------------------------------------CC-G-G----------------------------------------------UAGA-AAC-UGCGU-GGC-U-U-G-GG-AC-----CGGAAG-GCGCG-ACG-GGUACG-UCC--------------------GGG-GUA-GGA-GUGAAA-UC-C-CGUAAU-CCUGGACGG-ACC---CCGA--U-G-GCGAAAGCAC--GUCGCGA------GAACG--------------------------------------------------------------GAU-CC--GACAG-----UGA-GG--GACGAAA-G-C-CAGGG-UCUC-GAACCGG-AUUAGAUAC-----CCGGGUAG-UCCUG-GCCGUAAACAAUG-UCUG-CUAGGUG-UGGCUCCC--AC-UACGA--------------------------------GUG-GGUGCUG-UGCC-GUA-GG-AAGCCGC-UAA-GCAG-ACCGCCUG-GGAAGUACGUCC-GCAA-GGAU-GAA-ACUU-AAA-GGAAUUG-GCGGGGG-AGC--ACUA--CA-A-CCG-GAGGAG-CC-UGCGGU-UUAAUUG-G-ACUCAACG-CCGGA-CA-UCUCA-CCAGCAU---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACUGUGGUAAUGACGAUCAGGUUGAUGACCUUAUC-CGA-GCCUCAGAGAGGA-GGUGCAUGGCCGCCGUCA-GCUCGUACC-GUGA-GGCGU-CCUG-UUAA-GU-CAGGCAAC-GAGCGAGACC-CGCA-CC--CUUAC---U-U-GC-C-AG-CA--G--UACC--------------------------GCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGU---AGCUGGG-GACAAG-U-AGG-GGGAC-C-GCCG-UG-G-C-UAA-CAC-G--GAGG-A-AGG-A-ACGG-GCAACGGU--AGGUCAGUAU-G-CC-CCGAAUG--UG-C-U-GGGCAACACGCGGGCUACAAUGG-UCGAGA--C-AAA-GGGU-U-CC-U-A-C-UCCG-AA-AGGA-G-----------AC-G-GUAA-UCU-CA-G-AAACUCG-AUC-GUAGUUCGGA-UUGUGGGC-U-GCAACUC-GCCCACA-UGAAGCUGGAUU-CGGUAGUA-AUCGC-GUG-UC-AU-AAG-CGCGCGGUG-AAU-ACGUC-CCUGCUCCUUGCA----CACACCGCCCGUC-AAA--GCACCCGA-GUGAGGUCCGGAU-GA-A-GGCU-G-C----------------------------------------------CA-C----------------------------------------------GCACGU-CGAAUCUGG-CUUCG-CA-AGG-GGGCUU-AAGUCGUAACAAGGUAGCCGUAGGGGAAUCUG-CGGC-UGGAUCACCUCCU------------------------------------------------------------------------------------------
+>HalMorr3 Halococcus morrhuae
+----------------------CCUUCGUGCUCGGGACAUUCCGGUU-GAU-CCUGCCGGAGGCU-AUU-GC-UAUC-GGG-GUCC--GAUUCAGCCAU-GCUAGU-UGU-ACGG-GU--------------------------------------------------------------------------------------------UCAG----------------------------------------------------------------------------------------------AC--CCG-UAG-C-AA--A-UAGCUCCGU---AAC-ACGUGGU-CAA--ACU-AC-CCUCUGGA-CC--GGGAU-AU-CCUCG-G-GAAA-CUG-AGG-UCAAUCCC-A-GAU-A------C-UGC-U--U-UC-AUGU--------------------------------------------------------------------------------------------UG-GAAU-----------------------------------------------------------------------------------ACA--G-A--A--AG-UCG-GAAA-CGG-----------------------UCCG---------------------CC-G--C----------CG----------GAGG---ACG-U-GACUGCGG-CCG--A------UU-A-G-GU-A-G---ACGGUG-GG-G-UAAC-GG-CCCACCGU-GCCG-AUA-AUCGGUACGGGUUGU-G-AG-------------A-GCAA-GAAC-CCGGAGACGGUAU-CUGA-GA-CAAG-AUACCGG-GCC-C-UACG--GGGC-GC-A-GC-A-G-GCGCG-AAACCUUUA--------------------CACU-GCAC-GCCA-GUGCGAUAAGGGGACCCCGAG-UGC-GA-G-----G-GC----AUACA----GUC--C-------------------------UCGCUUUU-CG-UGAC-C-------------------------------G-----U-AA-GA----A--------------------------G-G-UC--U-CAG---------AA-UAAGA-GCUGGGCAAGA-CCGGU---GCCAGCCGCCG-CGGUAAU-AC-CGGC-AGCUCG-A-GUG-AUAGC-CACUAUUAUUGGGCCUAAAGCGUCCG-UAG-C-CGGCCG-AACAGG-UCCG-UCGGG-AAA-UC-CACCCG-CUC-AA-CGGGUGGGACGU-------------------------------------------CC-G-G----------------------------------------------CGGA-AAC-CAGUC-GGC-U-U-G-GG-GC-----CGGGAG-ACCAG-AGA-GGUACG-UCC--------------------GGG-GUA-GGA-GUGAAA-UC-C-UGUAAU-CCUGGACGG-ACC-A-CCGG--U-A-GCGAAAGCGU--CUCUGGA------GAACG--------------------------------------------------------------GAC-CC--GACG-----GUGA-GG--GACGAAA-G-C-UUGGG-UCUC-GAACCGG-AUUAGAUAC-----CCGGGUAG-UCCAA-GCUGUAAACGAUG-CUCG-CUAGGUG-UGGCGUUG--GC-UACGA--------------------------------GCC-AGCGCUG-UGCC-GUA-GGGAAGCCGA-GAA-GCGA-GCCGCCUG-GGAAGUACGUCC-GCAA-GGAU-GAA-ACUU-AAA-GGAAUUG-GCGGGGG-AGC--ACUA--CA-A-CCG-GAGGAG-CC-UGCGGU-UUAAUUG-G-ACUCAACG-CCGGA-CA-UCUCA-CCGGCACC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACAGUGUGCAGUGACAGUCAGUCCGAUGGGCUUACU-UGA-GCCACUGAGAGGA-GGUGCAUGGCCGCCGUCA-GCUCGUACC-GUGA-GGCGU-CCUG-UUAA-GU-CAGGCAAC-GAGCGAGACC-CGCG-UC--CCUAA---U-U-GC-C-AG-CA--G--CAGC--------------------------CUUGU-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCU---GGCUGGG-UACA-U-U-AGG-GAGAC-U-GCCG-UC-G-C-UAA-GAC-G--GAGG-A-AGG-A-ACGG-GCAACGGU--AGGUCAGUAU-G-CC-CCGAAUG--UG-C-C-GGGCGACACGCGGGCUACAAUGG-CCGAGA--C-AGU-GGGA-C-GC-U-A-C-CCCG-AG-AGGG-G-----------AC-G-CUAA-UCU-CC-U-AACCUCG-GUC-GUAGUUCGGA-UUGCGGGU-U-GAAACCC-ACCCGCA-UGAAGCUGGAUU-CGGUAGUA-AUCGC-AUU-UC-AGA-AG-AGUGCGGUG-AAU-ACGUC-CCUGCUCCUUGCA----CACACCGCCCGUC-AAA--UCACCCGA-GUGAGGUCCGGAU-GA-G-GCCG-G-C-G-------------------------------------------CAA----------------------------------------------C-GCCGGU-CGAAUCUGGGCUUCG-CA-AGG-GGGAUU-AAGUCGUAACAAGGUAGCCGUAGGGGAAUCUG-CGGC-UGGAUCACCUCCUACAGACCGG---------------------------------------------------------------------------------
+>GetSubte Geotoga subterranea
+------------------------------NNNUGGAAGAAGGGUUU-GAU-CCUGGCUCAGGGUGAAC-GC-UGGC-GGC-G-CG--C-CUAACACAU-GCAAGU-CGA-ACGG-AG---AAA---------------------------------------------GAGGAG-----------------------------------CUUG-----------------------------------CUCCUUG-----------------------------------------------AGU--AU--UAG-UGG-C-GA--A-CGGGUGAGU---AGA-ACGUAGG--AA--CCU-GC-CUAACGGA-CU--GGGAU-AG-CUACU-G-GAAA-CGG-UAG-GUAAUACU-G-GAU-AA---A----------------AUC---------------------------------------------------------------------------------------------G-AGA------------------------------------------------------------------------------------GAU-----------------AAAA--GC-U---------------------UAGA-------------------A-GC-G--C----------CG----------GGAG---AGG-G-GUCUACGA-CCC--A------UC-A-G-GU-A-G---UUGGUA-GG-G-UAAG-AG-CCUACCNA-GCCG-ACG-ACGGGUAGCCGAUGU-G-AG-------------A-GCAU-GAUC-GGCCACAAGGGAA-CUGA-GA-CACG-GUUCCUA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUUUUGGA--------------------CAAU-GCAC-GGAA-GUGUGAUCCAGCGACGCCGCG-UGA-AG-GA-AGAA-GUCC--UU-CG-GG-AUGUAAA------------------------CUUCUGAA-CU-UACA-GAA-U--A---AC-AGCA-UAAG---------------G-GG-A------------CUUA-UGU-AU-GA-AGGU-A-A-GU--A-AGG----------A-AAAGC-CCC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAG-AC-GUAG-GGGGCG-A-GCG-UUGCC-CGGAAUCACUGGGCGUAAAGGGGGCG-UAG-G-CGGUCU-CAUAAG-UCAG-GUGUG-AAA-UG-UCACUG-CUC-AA-CGGUGU-CAG-U-------------------------------------------GC-G-C----------------------------------------------AUGA-AAC-UGUGA-GAC-U-U-G-AG-GG-----UACCAG-AGGUA-GAC-AGAAUU-ACC--------------------UGA-GUA-GGG-GUGAAA-UC-C-GUAGAU-ACAGGUAAG-AAU-G-CCAG--U-G-GGGAAGCCGG--UCUACUG------GGGUG--------------------------------------------------------------ACC-CU--GACG-----CUGA-GG--CCCGAAA-G-C-UAGGG-UAGC-AAACCGG-AUUAGAUAC-----CCGGGUAG-UCCUA-GCAGUAAACGAUG-CUCA-CUAGGUG-UGGGGCA-------AGAA------------------------------------AGCUCCG-UGCU-GAA-GCAAACGCGA-UAA-GUGA-GCCGCCUG-GGGAGUACGCCC-GCAA-GGGU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-UCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAAAC-CGAAG-AA-CCUUA-CCAGGGC-UUGACA-UG--------------GAGAU------A-AG-G-C-AUAA-GAAA-U-UA-U-GUCA--ACCUG-UAU-----------------------------------------GUAA----------------------------------------------------------------AUAUAGGA---GU-CUC-A-CA--------------------------------------------------CAGGU-GGUGCACGGCCGUCGUCA-GCUCGUGCC-GUGA-GGUGU-UGGG-UUAA-GU-CCCACAAC-GAGCGCAACC-CCUA-UU--GUUAG---U-U-GC-C-AU-CA--U--------------------------------UAAGU---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UGGGC-UACU-C-U-AGC-GAGAC-A-GCCG-UC-G-A-CGA-GAC-G--GAGG-A-AGG-A-GGGG-AUGACGUC--AGGUAAGCGU-G-CC-CCUUAUG--CU-C-U-GGGCGACACACGUGCUACAAUGG-UGAGGG--C-AAA-AGGC-A-GC-G-A-A-GCCG-CG-AGGU-A-----------GA-G-CGAA-UCC-UA-U-AAACCUC-AUC-GUAAUUCGGA-UUGCAGGC-U-GAAACCC-GCCUGCA-UGAAACCGGAAU-CGCUAGUA-AUCGC-AGG-UC-AGCCAA-ACUGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACG--CCACCCGA-GUUGGAGACACCU-GAAA-AGGG-AAG-AAGU-AA-CC----------------------------------GAA-A--------------------------------------NGGGC-UAAUCUCU-UCAGGGUGGAGCUAG-CG-AGG-GGGGCG-AAGUCGUAACAAGGUAGGUGUACCGGAAGGUG-CGCC-UGGAUCACCUCCUUUCUAAGGAGAAGGCGAAGGUCUCUAUCUACUAAUGAGAGAGUAAAAGAUGGGGUGGUAGCUCAGUUGGGAGAGCGUCUCUUU-------
+>McsVanni Methanococcus vannielii
+--------------------------------------AUUCCGGUU-GAU-CCCGCCGGAGGCU-ACU-GC-UAUU-GGG-GUUC--GACUAAGCCAU-GCGAGU-CU--AUGG-U---------------------------------------------------------------------------------------------UUCG-----------------------------------------------------------------------------------------------G--CCA-UGG-C-GG--A-CGGCUCAUU---AAC-ACGUGGU-UAA--CUU-AA-CCUCAGGU-GG--AGCAU-AA-CCUUG-G-GAAA-CUG-AGG-AUAAUUCU-C-CAU-A------A-GAA-A--A-GC--AGU-------------------------------------------------------------------------------------------CUG-GAAC-----------------------------------------------------------------------------------GAU--U-C--U--UU-UCU-GAAA--GC-----------------------AUAU---------------------GC-G--C----------CC----------GAGG---AUA-G-GACUGCGC-UCG--A------UU-A-G-GU-A-G---UUGGUG-GG-G-UAAU-GG-CCCACCAA-GCCU-ACG-AUCGAUACGGGCCUU-G-AG-------------A-GAGG-GAGC-CCGGAGAUGGGGA-CUGA-GA-CACG-GCCCCAG-GCC-C-UACG--GGGC-GC-A-GC-A-G-GCGCG-AAACCUCCG--------------------CAAU-GCAC-GAAA-GUGCGACGGGGGGACCCCAAG-UGC-UC-A-----U-GC----AC-A-----GCA--U-------------------------GGGCUUUU-AU-CAAG-U-------------------------------G-----U-AA-AC----A--------------------------G-C-UU--G-AGG---------AA-UAAGG-GCUGGGCAAGU-UCGGU---GCCAGCAGCCG-CGGUAAU-AC-CGA-CGGCCCG-A-GUG-GUAGC-CACUCUUAUUGGGCCUAAAGCGUCCG-UAG-C-CGGUCC-AGUAAG-UCCC-UGUUU-AAA-UU-CUCUGG-CUU-AA-CCAGAG-GAC-U-------------------------------------------GG-C-A----------------------------------------------GGGA-UAC-UGCUG-GAC-U-U-G-GG-AC-----CGGGAG-AGGAC-AAG-GGUACU-CCA--------------------GGG-GUA-GCG-GUGAAA-UG-U-GUUGAU-CCUUGGAGG-ACC-A-CCUA--U-G-GCGAAGGCAC--UUGUCUG------GAACG--------------------------------------------------------------GGU-CC--GACGG-----UGA-GG--GACGAAA-G-C-CAGGG-GCGC-GAACCGG-AUUAGAUAC-----CCGGGUAG-UCCUG-GCCGUAAACUCUG-CGAA-CUAGGUG-UCACCUGG--GC-CUCGA--------------------------------GCC-CAGGUGG-UGCC-GAA-GGGAAGCCGU-UAA-GUUC-GCCGCCUG-GGGAGUACGGUC-GCAA-GACU-GAA-ACUU-AAA-GGAAUUG-GCGGGGG-AGC--ACCA--CA-A-CGG-GUGGAG-CC-UGCGGU-UUAAUUG-G-AUUCAACG-CCGGG-CA-UCUCA-CCAGGAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACAGC-AUGAUGACGGCCAGGUUGACGACCUUGCC-UGA-AGCGCUGAGAGGU-GGUGCAUGGCCAUCGUCA-GCUCGUACC-GCGA-GGCGU-CCUG-UUAA-GU-CAGGUAAC-GAGCGAGACC-CGUG-CC--CUAUG---U-U-GC-G-AC-UA--C--UUUC--------------------------UCCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAA---G-GUAAG-CACU-C-A-UAG-GGGAC-C-GCUA-GC-G-C-UAA-GCU-A--GAGG-A-AGG-A-GCGG-GCAACGAU--AGGUCCGCAU-G-CC-CCGAAUC--UC-C-U-GGGCUACACGCGGGCUACAAUGG-CUAGGA--C-AAU-GGGC-U-GC-U-A-C-CCUG-AA-AAGG-G-----------AC-G-CGAA-UCU-CC-G-AAACCUA-GUC-GUAGUUCGGA-UCGUGGGC-U-GUAACUC-GCCCACG-UGAAGCUGGAAU-CCGUAGUA-AUCGC-AGU-UC-AUA-AU-ACUGCGGUG-AAU-GUGUC-CCUGCUCCUUGCA----CACACCGCCCGUC-ACA--CCACCCGA-GUUGGGUUCAGGU-GA-G-GCCU-U-G-G-CC----------------------------------------UUU-------------------------------------------GG-C-UAGGGU-CGAACCUGGGCUCAG-CG-AGG-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCC-------------------------------------------------------------------------------------------
+>ThcProte Thermobacteroides proteolyticus
+--------------------------------------------UUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-CUAAUGCAU-GCAAGU-CGA-GCG--GG---CUA-----------------------------------------------CAAUC----------------------------------UUCG----------------------------------GAUUG--------------------------------------------------UAG--CU--UAG-CGG-C-GA--A-CGGGUGAGU---AAC-ACGUAGG-UAA--UCU-AC-CCUUGAGA-GG--AGGAC-AA-CCUCA-G-GAAA-CUG-AGG-CUAAACCU-U-CAU-AC---G-U-UCA-C--U-G---GUA---------------------------------------------------------------------------------------------G-GGA------------------------------------------------------------------------------------UAC----U--G--GU-GAA-GAAA-GAG-U-UA-C----C-G---------UUG------------AG---GUAG-CU-G--C----------UG----------AAGG---AUG-A-GCCUGCGG-CCC--A------UC-A-G-GU-A-G---UUGGUG-AG-G-UAAC-GG-CUCACCAA-GCCG-AAG-ACGGGUAACCGGUCU-G-AG-------------A-GGAU-GUCC-GGUCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-CAGGG-AAUCUUGGU--------------------CAAU-GGGC-GAAA-GCCUGACCCAGCGACGCCGCG-UGG-AG-GA-AGAA-GUCC--UU-CG-GG-GCGUAAA------------------------CUCCUGGA-CU-GGGG-GAC-G------A--------------------------G-UA-A----------------------G-GA-CGGU-A-C-CC--C-AGU---------AG-AAAGG-GAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAA-AC-GUAG-GUCCCG-A-GCG-UUGUU-CGGAUUCACUGGGUGUAAAGGGCGCG-UAG-G-UGGUUG-UCUGUG-UCUC-AUGUG-AAA-AC-UCAGGG-CUC-AA-CUCUGA-GAU-U-------------------------------------------GC-G-U----------------------------------------------GGGA-AAC-UAGGC-AGC-U-A-G-AG-GA-----CGGUAG-AGGGG-AGU-GGAAUU-CCC--------------------GGU-GUA-GCG-GUAAAA-UG-C-GUAGAU-AUCGGGAGG-AAC-A-CCGG--U-G-GCGAAGGCGG--CUCUCUG------GGCCG--------------------------------------------------------------AUC-CU--GACG-----CUGA-GG--CGCGAAA-G-C-UAGGG-GAGC-GAACCGG-AUUAGAUAC-----CCGGGUAG-UCCUA-GCCGUAAACGAUC-CCUG-CUAGGUG-UUGGGGGG--U---AAAG---------------------------------AC-CCUUCAG-UGCC-GAA-GCCAACGCGA-UAA-GCAU-CCCACCUG-GGGAGUACGGCC-GCAA-GGUU-GAA-ACUC-AAA-GGAAUUG-GCGGGGG-UCC--GC-A--CA-A-GCG-GCGGAG-CA-UGUGGU-UUAAUUC-G-AUGCAACG-CGAAG-AA-CCUUA-CCAGGGU-UUGACA-UG------------C-AGGUG------G-UA-G-GAACCU-GAAA-G-GG-GGACGA--CCCAA--CC-----------------------------------------GUAA----------------------------------------------------------------GG-GAGGG---AG-CCA-G-CA--------------------------------------------------CAGGU-GUUGCAUGGCUGUCGUCA-GCUCGUGCC-GUGA-GGUGU-CGGC-UUAA-GU-GCCGUAAC-GAGCGCAACC-CUCA-UC--CCUAA---U-U-GC-U-CC-UG--A--CAG--------------------------GUAAAAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G---U-CAGAG-CACA-A-U-AGG-GAGAC-C-GCUG-GC-G-A-AGA-GCC-A--GAGG-A-AGG-G-GAGG-AUGACGUC--AAGUCAGCAU-G-GC-CUUUAUG--CC-C-U-GGGCUACACACAUGCUACAAUGC-AGGGUA--C-AAC-GGGA-A-GC-G-A-A-GCCG-CG-AGGU-G-----------GA-G-CAAA-UCC-CC-A-AAAGCCC-UGC-UCAGUUCGGA-UCGCACGC-U-GAAAUUC-GCGUGCG-UGAAGUCGGAGU-CGCUAGUA-ACCGU-GGA-UC-AG-CAA-GCCGCGGUG-AAU-ACGUU-CUCGGGCCUUGCA----CACACCGCCCGUC-AAG--CCACCCGA-GUCGGGUUCACCA-GAAG-GCGG-UAA-C-CG----------------------------------------AAG-------------------------------------------AG-G-GCCGGA-CGACGGUGUGCCUGG-UA-AGG-AGGGCU-AAGUCGUAACAAGGUAGCUGUACCGGAAGGUG-CGGC-UGGAUCACCUCCUCCUU--------------------------------------------------------------------------------------
+>DicTherm Dictyoglomus thermophilum
+----------------------------------------AGAGUUU-GAU-NNUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-CUAAGGCAU-GCAAGU-CGA-GCGG-UA---GCU------------CC-------------------------------UAUUGGU----------------------------------UUAU----------------------------------GCCGAUAGG----------------------------------------------AGU--GA--GAG-CGG-C-GC--A-CGGGUGAGU---AAC-ACGUAGG-UAA--CCU-AC-CCCAGAGA-GG--GGGAU-AA-CACCU-C-GAAA-GGG-GUG-CUAAACCC-C-CAU-AU---A-C-UUA-C--C-GA--GCG---------------------------------------------------------------------------------------------A-UA-------------------------------------------------------------------------------------UGC--U-C-AG--GU-AAG-GAAA-GAG-U-AU-A----G-AGGG------GUAA------CCC--UC---UAUG-CU-G--C----------UC----------UGGG---AUG-G-GCCUGCGG-CCU--A------UC-A-G-CU-A-G---UUGGUG-GG-G-UAAU-GG-CCCACCAA-GGCU-AAG-ACGGGUAGCCGGCCU-G-AG-------------A-GGGU-GGUC-GGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-CCGGG-AAUCUUCCG--------------------CAAU-GGGG-GAAA-CCCUGACGGAGCGACGCCGCG-UGA-GG-GA-AGAA-GCCC--UU-CG-GG-GUGUAAA------------------------CCUCUUUU-CU-CGGG-GAA-G--A---A--------------------------U-AC------------------------U-GA-CGGU-A-C-CC--G-AGG---------AA-AAAGC-CCC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAG-AC-GUAG-GGGGCG-A-GCG-UUGUC-CGGAUUUACUGGGCGUAAAGGGCGUG-UAG-G-CGGCUU-AGCAAG-UCAG-AUGUG-GAA-GC-CCUGAG-CUC-AA-CUCAGG-GAG-G-------------------------------------------UC-A-U----------------------------------------------CUGA-UAC-UGCUA-AGC-U-A-G-AG-GG-----CAGGAG-AGGAG-AGC-GGAACU-UCC--------------------GGU-GUA-GCG-GUGAAA-UG-C-GUAGAU-AUCGGAAGG-AAC-G-CCGG--U-G-GCGAAGGCGG--CUCUCUG------GACUG--------------------------------------------------------------ACC-CU--GACG-----CUGA-GG--CGCGAAA-G-C-UAGGG-GAGC-GAACGGG-AUUAGAUAC-----CCCGGUAG-UCCUA-GCCGUAAACGAUG-GGCA-CUAGGUG-UGGGGAGU------UAG-----------------------------------A-CUCUCCG-UGCU-GCA-GCUAACGCGA-UAA-GUGC-CCCGCCUG-GGGAGUACGGCC-GCAA-GGCU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CG-CGUGGU-UUAAUUC-G-AUGCUAAG-CGAAG-AA-CCUUA-CCAGGGC-UUGACA-UG------------C-AGGCU----GUA-AG-C-UCACUC-GAAA-G-GG-UGAGUG--CCAAA-UAGGGG--------------------------------------GUUU-------------------------------------------------------------CCCCUAUUUGG---AG-CCU-G-CA--------------------------------------------------CAGGU-GGUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CCUG-CC--CUUAG---U-U-GC-C-AG-CG--G-------------------------------GUAAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGGG-CACU-C-U-AAG-GGGAC-U-GCCG-GC-G-A-AGA-GCC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCAGUAU-G-CC-CCUUAUG--CC-C-U-GGGCUACACACGCGCUACAAUGG-GUGGUA--C-AGA-GGGG-A-GC-G-A-A-GCCG-CG-AGGC-G-----------GA-G-CGAA-UCC-CU---AAAGCCA-CCC-CCAGUUCAGA-UCGCAGGC-U-GCAACUC-GCCUGCG-UGAAGGCGGAAU-CGCUAGUA-ACCGC-AGA-UC-AGCCAC-GCUGCGGUG-AAU-ACGUU-CUCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCACGAGA-GUCCGCAACACCC-GAAG-UCAG-G-C-G-------------------------------------------AAG----------------------------------------------A-GCCUGC-CGAAGGUGGGGCGGA-UG-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUACCGGAAGGUG-CGGC-UGGAUCACCUCCUUU----------------------------------------------------------------------------------------
+>DenRadi2 Deinococcus radiodurans
+---------------------------------UUUAUGGAGAGUUU-GAU-CCUGGCUCAGGGUGAAC-GC-UGGC-GGC-G-UG--C-UUAAGACAU-GCAAGU-CGA-ACGC-GG--------------------------------------------------------UC----------------------------------UUCG----------------------------------GA----------------------------------------------------------CC--GAG-UGG-C-GC--A-CGGGUGAGU---AAC-ACGUAAC-UGA--CCU-AC-CCAGAAGU-CA--UGAAU-AA-CUGGC-C-GAAA-GGU-CAG-CUAAUACG-U-GAU-GU---G-G-UGA-U--U-----UGC---------------------------------------------------------------------------------------------C-GUG------------------------------------------------------------------------------------GCA-------A--AU-CAC-UAAA--GA-----------------------UUUA---------------------UC-G--C----------UU----------CUGG---AUG-G-GGUUGCGU-UCC--A------UC-A-G-CU-G-G---UUGGUG-GG-G-UAAA-GG-CCUACCAA-GGCG-ACG-ACGGAUAGCCGGCCU-G-AG-------------A-GGGU-GGCC-GGCCACAGGGGCA-CUGA-GA-CACG-GGUCCCA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UUAGG-AAUCUUCCA--------------------CAAU-GGGC-GCAA-GCCUGAUGGAGCGACGCCGCG-UGA-GG-GA-UGAA-GGUU--UU-CG-GA-UCGUAAA------------------------CCUCUGAA--U-CUGG-GAC-G--A-A-AG---AG-CC-----------------U-UC-G--------------GG-CAG-AU-GA-CGGU-A-C-CA--G-AGU---------AA-U-AGC-ACC-GGCUAAC-UCCGU---GCCAGCAGCCG-CGGUAAU-AC-GGAG-GGUGCA-A-GCG-UUACC-CGGAAUCACUGGGCGUAAAGGGCGUG-UAG-G-CGGAUA-UUUAAG-UCUG-GUUUU-AAA-GA-CCGAGG-CUC-AA-CCUCGG-GAG-U-------------------------------------------GG-A-C----------------------------------------------UGGA-UAC-UGGAU-GUC-U-U-G-AC-CU-----CUGGAG-AGGUA-ACU-GGAAUU-CCU--------------------GGU-GUA-GCG-GUGGAA-UG-C-GUAGAU-ACCAGGAGG-AAC-A-CCAA--U-G-GCGAAGGCAA--GUUACUG------GACAG--------------------------------------------------------------AAG-GU--GACG-----CUGA-GG--CGCGAAA-G-U-GUGGG-GAGC-AAACCGG-AUUAGAUAC-----CCGGGUAG-UCCAC-ACCCUAAACGAUG-UACG-UUGGCUA-AGCGCAG-------GAUG------------------------------------CUGUGCU-UGGC-GAA-GCUAACGCGA-UAA-ACGU-ACCGCCUG-GGAAGUACGGCC-GCAA-GGUU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCAGGUC-UUGACA-UG--------------CUAGG------A-AG-G-C-GCUG-GAGA-C-AG-C-GCCG--UGC----CC-----------------------------------------UUCG----------------------------------------------------------------GG---GAA---CC-UAG-A-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-CU--UCCAG---U-U-GC-C-AG-CA--U--------------------------------UCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-GGA-GGGAC-U-GCCU-GU-G-A--AA-GCA-G--GAGG-A-AGG-C-GGGG-AUGACGUC--UAGUCAGCAU-G-GU-CCUUACG--UC-C-U-GGGCUACACACGUGCUACAAUGG-AUAGGA--C-AAC-GCGC-A-GC-A-A-A-CAUG-UG-AGUG-U-----------AA-G-CGAA-UCG-CU-G-AAACCUA-UCC-CCAGUUCAGA-UCGGAGUC-U-GCAACUC-GACUCCG-UGAAGUUGGAAU-CGCUAGUA-AUCGC-GGG-UC-AG-CAU-ACCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUAGAUUGCAGUU-GAAA-CCGC-CGG-G----AG-CC----------------------------------UCA-C--------------------------------------GG----C-AGGCGU-CUAGACUGUGGUUUA-UG-ACU-GGGGUG-AAGUCGUAACAAGGUAACUGUACCGGAAGGUG-CGGU-UGGAUCACCUCCUUU----------------------------------------------------------------------------------------
+>ChyTrach Chlamydia trachomatis
+-------------------------------UUUUUUCUGAGAAUUU-GAU-CUUGGUUCAGAUUGAAC-GC-UGGC-GGC-G-UG--G-AUGAGGCAU-GCAAGU-CGA-ACGG-AG---CAA------------------------------------------------UUGU----------------------------------UUCG----------------------------------GCAA---------------------------------------------------UUG--UU--UAG-UGG-C-GG--A-AGGGUUAGU---AAU-GCAUAGA-UAA--UUU-GU-CCUUAACU-UG--GGAAU-AA-CGGUU-G-GAAA-CGG-CCG-CUAAUACC-G-AAU-GU---G-G-CGA-U--A-UU--UGG---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------CCG--A-G--U--AA-CGU-UAAA--GA-A-GG-G-GA-U-C---------UUAG-----------GA---CCUU-UC-G--G----------UU----------AAGG---GAG-A-GUCUAUGU-GAU--A------UC-A-G-CU-A-G---UUGGUG-GG-G-UAAA-GG-CCUACCAA-GGCU-AUG-ACGUCUAGGCGGAUU-G-AG-------------A-GAUU-GGCC-GCCAACACUGGGA-CUGA-GA-CACU-GCCCAGA-CUC-C-UACG--GGAG-GC-U-GC-A-G-UCGAG-AAUCUUUCG--------------------CAAU-GGAC-GGAA-GUCUGACGAAGCGACGCCGCG-UGU-GU-GA-UGAA-GGCU--CU-AG-GG-UUGUAAA------------------------GCACUUUC-GC-UUGG-GAA-U------AA-GAGA-AGGCGG-------U-----U-AA-UA----C---CC-GCUG-GAU-UU-GA-GCGU-A-C-CA--G-GUA---------AA-GAAGC-ACC-GGCUAAC-UCCGU---GCCAGCAGCUG-CGGUAAU-AC-GGAG-GGUGCU-A-GCG-UUAAU-CGGAUUUAUUGGGCGUAAAGGGCGUG-UAG-G-CGGAAA-GGUAAG-UUAG-UUGUC-AAA-GA-UCGGGG-CUC-AA-CCCCGA-GUC-G-------------------------------------------GC-A-U----------------------------------------------CUAA-UAC-UAUUU-UUC-U-A-G-AG-GG-----UAGAUG-GAGAA-AAG-GGAAUU-UCA--------------------CGU-GUA-GCG-GUGAAA-UG-C-GUAGAU-AUGUGGAAG-AAC-A-CCAG--U-G-GCGAAGGCGC--UUUUCUA------AUUUA--------------------------------------------------------------UAC-CU--GACG-----CUAA-GG--CGCGAAA-G-C-AAGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCUU-GCCGUAAACGAUG-CAUA-CUUGAUG-UGGAUGGU-----CUCAA-C--------------------------------C-CCAUCCG-UGUC-GGA-GCUAACGCGU-UAA-GUAU-GCCGCCUG-AGGAGUACACUC-GCAA-GGGU-GAA-ACUC-AAA-AGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCA-GUGGAG-CA-UGUGGU-UUAAUUC-G-AUGCAACG-CGAAG-GA-CCUUA-CCUGGGU-UUGACA-UG------------U-AUAUG------A-CC-G-C-GGCA-GAAA-U-GU-C-GUUU--U------CC-----------------------------------------GCAA----------------------------------------------------------------GG-----A---CA-UAU-A-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGCC-GUGA-GGUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUA-UC--GUUAG---U-U-GC-C-AG-CA--C--U-----------------------------U-AG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-GUGGG-AACU-C-U-AAC-GAGAC-U-GCCU-GG-G-U-UAA-CCA-G--GAGG-A-AGG-C-GAGG-AUGACGUC--AAGUCAGCAU-G-GC-CCUUAUG--CC-C-A-GGGCGACACACGUGCUACAAUGG-CCAGUA--C-AGA-AGGU-A-GC-A-A-G-AUCG-UG-AGAU-G-----------GA-G-CAAA-UCC-UC---AAAGCUG-GCC-CCAGUUCGGA-UUGUAGUC-U-GCAACUC-GACUACA-UGAAGUCGGAAU-UGCUAGUA-AUGGC-GUG-UC-AGCCAU-AACGCCGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--UCAUGGGA-GUUGGUUUUACCU-UAAG-UCGU-UGA-C-UC-AA-CCC---------------------------------GCA-A-------------------------------------GGGAGA-G-AGGCGC-CCAAGGUGAGGCUGA-UG-ACU-AGGAUG-AAGUCGUAACAAGGUAGCCCUACCGGAAGGUG-GGGU-UGGAUCACCUCCUUU----------------------------------------------------------------------------------------
+>FraSp19 Frankia sp
+---------------------------------UUGAUGGAGAGUUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-UUAACACAU-GCAAGU-CGA-GCG--AGG------------------------------------------------------GGC----------------------------------UUCG----------------------------------GCU---------------------------------------------------------CU---AG-CGG-C-GA--A-CGGGUGAGU---AAC-ACGUGGG-CAA--CCU-GC-CCCGAGCU-CU--GGAAU-AA-CCUCG-G-GAAA-CCG-GGG-CUAAUGCC-G-GAU-AU---G-A-CGC-U--A-C---CGG---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------CUG----G--U--GG-UGUGGAAA--GA-----------------------UUUA---------------------UC-G--G----------CU----------CGGG---AUG-G-GCCCGCGG-CCU--A------UC-A-G-CU-U-G---UUGGUG-GG-G-UGAU-GG-CCUACCAA-GGCG-ACG-ACGGGUAGCCGGCCU-G-AG-------------A-GGGC-GACC-GGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCG--------------------CAAU-GGGC-GAAA-GCCUGACGCAGCGACGCCGCG-UGG-GG-GA-UGAC-GGCC--UU-CG-GG-UUGUAAA------------------------CCUCUUUC-AG-CAGG-GAC-G--A-A-GC-------------------------G-CA-A---------------------GU-GA-CGGU-A-C-CU--G-CAG---------AA-GAAGC-ACC-GGCCAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GGUGCA-A-GCG-UUGUC-CGGAAUUAUUGGGCGUAAAGAGCUCG-UAG-G-CGGCCU-GUCGCG-UCGG-CUGUG-AAA-AC-CCGGGG-CUC-AA-CCCCGG-GCC-U-------------------------------------------GC-A-G----------------------------------------------UCGA-UAC-GGGCA-GGC-U-A-G-AG-UC-----CGGCAG-GGGAG-ACU-GGAAUU-CCU--------------------GGU-GUA-GCG-GUGAAA-UG-C-GCAGAU-AUCAGGAGG-AAC-A-CCGG--U-G-GCGAAGGCGG--GUCUCUG------GGCCG--------------------------------------------------------------GAA-CU--GACG-----CUAA-GG--AGCGAAA-G-C-GUGGG-GAGC-GAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGUUG-GGCG-CUAGGUG-UGGGGGAC----CUUCCA-C--------------------------------G-GCCUCCG-UGCC-GCA-GCUAACGCAU-UAA-GCGC-CCCGCCUG-GGGAGUACGGCC-GCAA-GGCU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GCGGAG-CA-UGUGGC-UUAAUUC-G-AUGCAACG-CGAAG-AA-CCUUA-CCAGGGC-UUGACA-UG------------C-AGGGA------A-AU-C-U-CGUA-GAGA-U-AC-G-GGGU---------CC-----------------------------------------GUAA----------------------------------------------------------------GG---------GU-CCU-G-CA--------------------------------------------------CAGGU-GGUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUCG-UC--CUAUG---U-U-GC-C-AG-CG--A-------------------------------GUUAUG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCGGG-GACU-C-A-UAG-GAGAC-U-GCCG-GG-G-U-CAA-CUC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCAUCAU-G-CC-CCUUACG--UC-C-U-GGGCUGCACACAUGCUACAAUGG-CCGGUA--C-AAA-GGGC-U-GC-G-A-U-ACCG-UG-AGGU-G-----------GA-G-CGAA-UCC-CA-A-AAAGCCG-GUC-UCAGUUCGGA-UCGGGGUC-U-GCAACUC-GACCCCG-UGAAGUCGGAGU-CGCUAGUA-AUCGC-AGA-UC-AGCAAU-GCUGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACG--UCACGAAA-GUCGGUAACACCC-GAAG-CCGG-UGG-C-CU-AA-CC----------------------------------CUU-GU-------------------------------------GGGGG-G-AGCCGU-CGAAGGUGGGACCGG-CG-AUU-GGGACG-AAGUCGUAACAAGGUAGCCGUACCGGAAGGUG-CGGC-UGGAUCACCUCCUUU----------------------------------------------------------------------------------------
+>AtsUtahe Actinoplanes utahensis
+----------------------------------------AGAGUUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-UUAACACAU-GCAAGU-CGA-GCG--GAAA-G-G-------------------------------------------------CCC----------------------------------UUCG----------------------------------GGG----------------------------------------------------UAC--UC--GAG-CGG-C-GA--A-CGGGUGAGU---AAC-ACGUGAG-UAA--CCU-GC-CCCAGACU-UU--GGGAU-AA-CCCUC-G-GAAA-CGG-GGG-CUAAUACC-G-AAU-AU---G-A-CCU-A--G-C---UUC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GGA----G--C--GU-GGUGGAAA--GU-----------------------UUU----------------------UC-G--G----------UU----------UGGG---AUG-G-ACUCGCGG-CCU--A------UC-A-G-CU-U-G---UUGGUG-GG-G-UAAU-GG-CCUACCAA-GGCG-ACG-ACGGGUAGCCGGCCU-G-AG-------------A-GGGC-GACC-GGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCA--------------------CAAU-GGGC-GGAA-GCCUGAUGCAGCGACGCCGCG-UGA-GG-GA-UGAC-GGCC--UU-CG-GG-UUGUAAA------------------------CCUCUUUC-AG-CAGG-GAC-G--A-A-GC-------------------------G-CA-A---------------------GU-GA-CGGU-A-C-CU--G-CAG---------AA-GAAGC-GCC-GGCCAAC-UACGU---GCCAGCAGCCG-CGGUAAG-AC-GUAG-GGCGCG-A-GCG-UUGUC-CGGAUUUAUUGGGCGUAAAGAGCUCG-UAG-G-CGGCUU-GUCGCG-UCGA-AUGUG-AAA-UC-CCGAGG-CUC-AA-CUUCGG-GCU-U-------------------------------------------GC-A-U----------------------------------------------UCGA-UAC-GGGCA-GGC-U-A-G-AG-UU-----CGGUAG-GGGAG-ACU-GGAAUU-CCU--------------------GGU-GUA-GCG-GUGAAA-UG-C-GCAGAU-AUCAGGAGG-AAC-A-CCGG--U-G-GCGAAGGCGG--GUCUCUG------GGCCG--------------------------------------------------------------AUA-CU--GACG-----CUGA-GG--AGCGAAA-G-C-GUGGG-GAGC-GAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCUGUAAACGUUG-GGCG-CUAGGUG-UGGGGGGC----CUCUCC-G--------------------------------G-UUUCCUG-CGCC-GCA-GCUAACGCAU-UAA-GCGC-CCCGCCUG-GGGAGUACGGCC-GCAA-GGCU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GCGGAG-CA-UGCGGA-UUAAUUC-G-AUGCAACG-CGAAG-AA-CCUUA-CCUGGGU-UUGACA-UC------------G-CCGGA------A-AU-C-U-CGCA-GAGA-U-GC-G-GGGU---------CU------------------------------------------UCG----------------------------------------------------------------GG---------GC-CGG-U-GA--------------------------------------------------CAGGU-GGUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUCG-UU--CGAUG---U-U-GC-C-AG-CG--C-------------------------------GUAAUG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGGG-GACU-C-A-UCG-GAGAC-U-GCCG-GG-G-U-CAA-CUC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCAUCAU-G-CC-CCUUAUG--UC-C-A-GGGCUUCACGCAUGCUACAAUGG-CCGGUA--C-AAA-GGGC-U-GC-G-A-U-ACCGUUA-AGGU-G-----------GA-G-CGAA-UCC-CA-A-AAAGCCG-GUC-UCAGUUCGGA-UCGGGGUC-U-GCAACUC-GACCCCG-UGAAGUCGGAGU-CGCUAGUA-AUCGC-AGA-UC-AGCAAC-GCUGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACG--UCACGAAA-GUCGGCAACACCC-GAAG-CCGG-UGG-C-CU-AA-CCC---------------------------------GUA-A-------------------------------------GGGAGG-G-AGCCGU-CGAAGGUGGGGCUGG-CG-AUU-GGGACG-AAGUCGUAACAAGGUAGCCGUACCGGAAGGUG-CGGC-UGGAUCACCUCCUU-----------------------------------------------------------------------------------------
+>MyoChlor Mycobacterium chlorophenolicus
+----------------------GUGGGGGUUUUUGUUUGGAGAGUUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-UUAACACAU-GCAAGU-CGA-ACG--GAAA-G-G-------------------------------------------------CCC----------------------------------UUCG----------------------------------GGG----------------------------------------------------UAC--UC--GAG-UGG-C-GA--A-CGGGUGAGU---AAC-GCGUGGG-UGA--UCU-GC-CCUGCACU-UU--GGAAU-AA-GCCUG-G-GAAA-CUG-GGU-CUAAUACC-G-AAU-AG---G-A-CCA-C--G-G---UCU---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GGA----U--U--GU-GGUGGAAA--GC-----------------------UUUU---------------------GC-G--G----------UG----------UGGG---AUG-G-GCCCGCGG-CCU--A------UC-A-G-CU-U-G---UUGGUG-AG-G-UUAC-GG-CUCACCAA-GGCG-ACG-ACGGGUAGCCGGCCU-G-AG-------------A-GGGU-GUCC-GGCCACACUGGGA-CUGA-GA-UACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCA--------------------CAAU-GGGC-GCAA-GCCUGAUGCAGCGACGCCGCG-UGA-GG-GA-UGAC-GGCC--UU-CG-GG-UUGUAAA------------------------CCUCUUUC-GC-CAGG-GAC-G--A-A-GC-------------------------G-CA-A---------------------GU-GA-CGGU-A-C-CU--G-GAG---------AA-GAAGC-ACC-GGCCAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GGUGCG-A-GCG-UUGUC-CGGAAUUACUGGGCGUAAAGAGCUCG-UAG-G-UGGUUU-GUCGCG-UUGU-UCGUG-AAA-AC-UCACAG-CUU-AA-CUGUGG-GCG-U-------------------------------------------GC-G-G----------------------------------------------GCGA-UAC-GGGCA-GAC-U-G-G-AG-UA-----CUGCAG-GGGAG-ACU-GGAAUU-CCU--------------------GGU-GUA-GCG-GUGGAA-UG-C-GCAGAU-AUCAGGAGG-AAC-A-CCGG--U-G-GCGAAGGCGG--GUCUCUG------GGCAG--------------------------------------------------------------UAA-CU--GACG-----CUGA-GG--AGCGAAA-G-C-GUGGG-GAGC-GAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGGUG-GGUA-CUAGGUG-UGGGUUUC----CUUCCU-U--------------------------------G-GGAUCCG-UGCC-GUA-GCUAACGCAU-UAA-GUAC-CCCGCCUG-GGGAGUACGGCC-GCAA-GGCU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GCGGAG-CA-UGUGGA-UUAAUUC-G-AUGCAACG-CGAAG-AA-CCUUA-CCUGGGU-UUGACA-UG------------C-ACAGG------A-CG-C-C-GGCA-GAGA-U-GU-C-GGUU--C------CC-----------------------------------------UUGU----------------------------------------------------------------GG---------CC-UGU-G-UG--------------------------------------------------CAGGU-GGUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-UC--UCAUG---U-U-GC-C-AG-CA--C-------------------------------GUAAUG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUGGG-GUCU-C-G-UGA-GAGAC-U-GCCG-GG-G-U-CAA-CUC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCAUCAU-G-CC-CCUUAUG--UC-C-A-GGGCUUCACACAUGCUACAAUGG-CCGGUA--C-AAA-GGGC-U-GC-G-A-U-GCCG-UG-AGGU-G-----------GA-G-CGAA-UCC-UUUC-AAAGCCG-GUC-UCAGUUCGGA-UCGGGGUC-U-GCAACUC-GACCCCG-UGAAGUCGGAGU-CGCUAGUA-AUCGC-AGA-UC-AGCAAC-GCUGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACG--UCAUGAAA-GUCGGUAACACCC-GAAG-CCGG-UGG-C-CU-AA-CCC---------------------------------CUU-GU------------------------------------GGGAGG-G-AGCCGU-CGAAGGUGGGAUCGG-CG-AUU-GGGACG-AAGUCGUAACAAGGUAGCCGUACCGGAAGGUG-CG-C-UGGUUCACCUCCUUUCU--------------------------------------------------------------------------------------
+>PydOccul Pyrodictium occultum
+--------------------------------------ACUCCGGUU-GAU-CCUGCCGGGCCCG-ACC-GC-UAUC-GGG-GUGG--GACUAAGCCAU-GGGAGU-CGU-GCGC-CC-------------------------------------------------------CCG----------------------------------GACG----------------------------------CGG---------------------------------------------------------GG--GCG-CGG-C-GG--A-CGGCUGAGU---AAC-ACGUGGC-CAA--CCU-AC-CCUCGGGA-CG--GGGAU-AA-CCCCG-G-GAAA-CUG-GGG-CUAAUCCC-C-GAU-A------G-GCG-A--G-GG--GGC-------------------------------------------------------------------------------------------CUG-GAACG----------------------------------------------------------------------------------GGU--C-C--C--UC-GCC-GAAA-GGG-C-GC-G----C-GG-------AGCCUCC------C--CG---CGCG-CC-G--C----------CC----------GAGG---AUG-G-GGCUGCGG-CCC--A------UC-A-G-GU-A-G---UUGGCG-GG-G-UAAC-GG-CCCGCCAA-GCCG-AUA-ACGGGUAGGGGCCGU-G-AG-------------A-GCGG-GAGN-CCCCAGAUGGGCA-CUGA-GA-CAAG-GGCCCAG-GCC-C-UACG--GGGC-GC-A-CC-A-G-GCGCG-AAACCUCCG--------------------CAAU-GCGG-GCAA-CCGUGACGGGGUCACCCCGAG-UGC-CG-C-----C-G-----AU-A------AG--G-------------------------CGGCUGUU-CC-CCGC-U-------------------------------G-----U-AG-GA----A--------------------------G-G-CG--G-GGG---------AG-UAAGC-GGGGGGCAAGU-CUGGU---GUCAGCCGCCG-CGGUAAU-AC-CAG-CCCCGCG-A-GCG-GUCGG-GAUGAUUACUGGGCCUAAAGCGCCCG-UAG-C-CGGCCC-GGUAAG-UCCC-CCCCU-AAA-GC-CCCGGG-CUC-AA-CCCGGG-GAG-U-------------------------------------------GG-G-G----------------------------------------------GGGA-UAC-UGCCG-GGC-U-A-G-GG-GG-----CGGGAG-AGGCC-GAG-GGUACU-CCC--------------------GGG-GUA-GGG-GCGAAA-UC-C-GAUAAU-CCCGGGAGG-ACC-A-CCAG--U-G-GCGAAGGCGC--UCGGCUG------GAACG--------------------------------------------------------------CGC-CC--GACGG-----UGA-GG--GGCGAAA-G-C-CGGGG-GAGC-AAACCGG-AUUAGAUAC-----CCGGGUAG-UCCCG-GCUGUAAACGAUG-CGGG-CUAGGUG-UUGGGCGG--GC-UUGGA--------------------------------GCC-CGCCCAG-UGCC-GCA-GGGAAGCCGU-UAA-GCCC-GCCGCCUG-GGGAGUACGGCC-GCAA-GGCU-GAA-ACUU-AAA-GGAAUUG-GCGGGGN-AGC--ACCA--CA-A-GGG-GUGGAG-CC-UGCGGC-UUAAUUG-G-AGUCAACG-CCGGG-AA-UCUUA-CCGGGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACAGC-AGGAUGACGGCCAGGCUGACGACCUUGCC-CGA-CACGCUGAGAGGA-GGUGCAUGGCCGUCGCCA-GCUCGUGCC-GUGA-GGUGU-CCGG-UUAA-GU-CCGGCAAC-GAGCGAGACC-CCCA-CC--CCUAG---U-U-GC-U-AC-CC--C--GGGG--------------------------CCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCC---C-GGGGG-CACA-C-U-AGG-GGGAC-U-GCCG-NC-G-UCCAA-GGC-G--GAGG-A-AGG-A-GGGG-GCCACGGC--AGGUCAGCAU-G-CC-CCGAAUC--CC-C-C-GGGCUGCACGCGGGCUACAAUGG-CGGGGA--C-AGC-GGGA-U-CC-G-A-C-CCCG-AA-AGGG-G-----------GA-G-GCAA-UCC-CU-U-AAACCCC-GCC-GCAGUUGGGA-UCGAGGGC-U-GCAACUC-GCCCUCG-UGAACGCGGAAU-CCCUAGUA-ACCGC-GCG-UU-AGC-AU-CGCGCGGUG-AAU-ACGUC-CCUGCUCCUUGCA----CACACCGCCCGUC-GCU--CCACCCGA-GCGGGGGAGGGGU-GA-G-GCCC-C-G-U-CC--------------------------------------CUCGC-CA----------------------------------------GG-G-CGGGGU-CGAACCUCUCCCCCG-CG-AGG-GGGGAG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCCU------------------------------------------------------------------------------------------
+>MyoLepr2 Mycobacterium leprae
+--------------------------------UUGUUUGGAGAGUUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-UUAACACAU-GCAAGU-CGA-ACG--GAAA-G-G-----------UCU-------------------------------CUAAAAA----------------------------------AUCU----------------------------------UUUUUAGAGA---------------------------------------------UAC--UC--GAG-UGG-C-GA--A-CGGGUGAGU---AAC-ACGUGGG-UAA--UCU-GC-CCUGCACU-UC--GGGAU-AA-GCUUG-G-GAAA-CUG-GGU-CUAAUACC-G-GAU-AG---G-A-CUU-C--A-A---GGC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GUC----U--U--GU-GGUGGAAA--GC-U---------------------UUU--------------------U-GC-G--G----------UG----------CAGG---AUG-G-GCCCGCGG-CCU--A------UC-A-G-CU-U-G---UUGGUG-GG-G-UGAC-GG-CCUACCAA-GGCG-ACG-ACGGGUAGCCGGCCU-G-AG-------------A-GGGU-GUCC-GGCCACACUGGGA-CUGA-GA-UACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCA--------------------CAAU-GGGC-GCAA-GCCUGAUGCAGCGACGCCGCG-UGG-GG-GA-UGAC-GGCC--UU-CG-GG-UUGUAAA------------------------CCUCUUUC-AC-CAUC-GAC-G--A-A-GG--UCU-GGG----------------U-UU-U-------------CUC-GGA-UU-GA-CGGU-A-G-GU--G-GAG---------AA-GAAGC-ACC-GGCCAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GGUGCG-A-GCG-UUGUC-CGGAAUUACUGGGCGUAAAGAGCUCG-UAG-G-UGGUUU-GUCGCG-UUGU-UCGUG-AAA-UC-UCACGG-CUU-AA-CUGUGA-GCG-U-------------------------------------------GC-G-G----------------------------------------------GCGA-UAC-GGGCA-GAC-U-A-G-AG-UA-----CUGCAG-GGGAG-ACU-GGAAUU-CCU--------------------GGU-GUA-GCG-GUGGAA-UG-C-GCAGAU-AUCAGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGG--GUCUCUG------GGCAG--------------------------------------------------------------UAA-CU--GACG-----CUGA-GG--AGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGGUG-GGUA-CUAGGUG-UGGGUUUC----CUUCCU-U--------------------------------G-GGAUCCG-UGCC-GUA-GCUAACGCAU-UAA-GUAC-CCCGCCUG-GGGAGUACGGCC-GCAA-GGCU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GCGGAG-CA-UGUGGA-UUAAUUC-G-AUGCAACG-CGAAG-AA-CCUUA-CCUGGGU-UUGACA-UG------------C-ACAGG------A-UG-C-G-UCUA-GAGA-U-AG-G-CACU--C------CC-----------------------------------------UUGU----------------------------------------------------------------GG---------CC-UGU-G-UG--------------------------------------------------CAGGU-GGUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-UC--UCAUG---U-U-GC-C-AG-CA--C-------------------------------GUAAUG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUGGG-GACU-C-G-UGA-GAGAC-U-GCCG-CG-G-U-CAA-CUC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCAUCAU-G-CC-CCUUAUG--UC-C-A-GGGCUUCACACAUGCUACAAUGG-CCGGUA--C-AAA-GGGC-U-GC-G-A-U-GCCG-CA-AGGU-U-----------AA-G-CGAA-UCC-UUUU-AAAGCCG-GUC-UCAGUUCGGA-UCGGGGUC-U-GCAACUC-GACCCCG-UGAAGUCGGAGU-CGCUAGUA-AUCGC-AGA-UC-AGCAAC-GCUGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACG--UCAUGAAA-GUCGGUAACACCC-GAAG-CCAG-UGG-C-CU-AA-CC----------------------------------CUC-G--------------------------------------GGAGG-G-AGCUGU-CCAAGGUGGGAUCGG-CG-AUU-GGGACG-AAGUCGUAACAAGGUAGCCGUACCGGAAGGUG-CGGC-UGGAUCACCUCCUUUCU--------------------------------------------------------------------------------------
+>StrAmbof Streptomyces ambofaciens
+----------------------------------UCACGGAGAGUUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-UUAACACAU-GCAAGU-CGA-ACG--AUG--AAC-------------------------------------------------CAC----------------------------------UUCG----------------------------------GUG----------------------------------------------------GGG--AU--UAG-UGG-C-GA--A-CGGGUGAGU---AAC-ACGUGGG-CAA--UCU-GC-CCUGCACU-CU--GGGAC-AA-GCCCU-G-GAAA-CGG-GGU-CUAAUACC-G-GAU-AC---U-G-AUC-C--G-CU--UGG---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------CCA--G-G--C--GG-UUC-GAAA--GC-----------------------UCCG---------------------GC-G--G----------UG----------CAGG---AUG-A-GCCCGCGG-CCU--A------UC-A-G-CU-U-G---UUGGUG-AG-G-UAGU-GG-CUCACCAA-GGCG-ACG-ACGGGUAGCCGGCCU-G-AG-------------A-GGGC-GACC-GGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCA--------------------CAAU-GGGC-GAAA-GCCUGAUGCAGCGACGCCGCG-UGA-GG-GA-UGAC-GGCC--UU-CG-GG-UUGUAAA------------------------CCUCUUUC-AG-CAGG-GAA-G--A-A-GC-------------------------G-AA-A---------------------GU-GA-CGGU-A-C-CU--G-CAG---------AA-GAAGC-GCC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GGCGCA-A-GCG-UUGUC-CGGAAUUAUUGGGCGUAAAGAGCUCG-UAG-G-CGGCUU-GUCACG-UCGG-UUGUG-AAA-GC-CCGGGG-CUU-AA-CCCCGG-GUC-U-------------------------------------------GC-A-G----------------------------------------------UCGA-UAC-GGGCA-GGC-U-A-G-AG-UU-----CGGUAG-GGGAG-AUC-GGAAUU-CCU--------------------GGU-GUA-GCG-GUGAAA-UG-C-GCAGAU-AUCAGGAGG-AAC-A-CCGG--U-G-GCGAAGGCGG--AUCUCUG------GGCCG--------------------------------------------------------------AUA-CU--GACG-----CUGA-GG--AGCGAAA-G-C-GUGGG-GAGC-GAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGGUG-GGCA-CUAGGUG-UGGGCAAC----AUUCCA-C--------------------------------G-UUGUCCG-UGCC-GCA-GCUAACGCAU-UAA-GUGC-CCCGCCUG-GGGAGUACGGCC-GCAA-GGCU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GCGGAG-CA-UGUGGC-UUAAUUC-G-ACGCAACG-CGAAG-AA-CCUUA-CCAAGGC-UUGACA-UA------------C-ACCGG------A-AA-G-C-AUUA-GAGA-U-AG-U-GCCC---------CC-----------------------------------------CUUGU---------------------------------------------------------------GG---------UC-GGU-G-UA--------------------------------------------------CAGGU-GGUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-UC--CCGUG---U-U-GC-C-AG-CA--A--GCCC--------------------------UUCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGG---UGUUGGG-GACU-C-A-CGG-GAGAC-C-GCCG-GG-G-U-CAA-CUC-G--GAGG-A-AGG-U-GGGG-ACGACGUC--AAGUCAUCAU-G-CC-CCUUAUG--UC-U-U-GGGCUGCACACGUGCUACAAUGG-CCGGUA--C-AAU-GAGC-U-GC-G-A-U-ACCG-CG-AGGU-G-----------GA-G-CGAA-UCU-CA-A-AAAGCCG-GUC-UCAGUUCGGA-UUGGGGUC-U-GCAACUC-GACCCCA-UGAAGUCGGAGU-CGCUAGUA-AUCGC-AGA-UC-AGCAUU-GCUGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACG--UCACGAAA-GUCGGUAACACCC-GAAG-CCGG-UGG-C-CC-AA-CCC---------------------------------CUU-GU------------------------------------GGGAGG-G-AGCUGU-CGAAGGUGGGACUGG-CG-AUU-GGGACG-AAGUCGUAACAAGGUAGCCGUACCGGAAGGUG-CGGC-UGGAUCACCUCCUUUCU--------------------------------------------------------------------------------------
+>CliXyli Clavibacter xyli subsp cynodontis
+----------------------------------UUACGGAGAGUUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-UUAACACAU-GCAAGU-CGA-ACGA-UG---AAC----------------------------------------------CAGGAG----------------------------------CUUG----------------------------------CUCUUG-------------------------------------------------GGA--AU--UAG-UGG-C-GA--A-CGGGUGAGU---AAC-ACGUGAG-UAA--CCU-GC-CCUUGACU-CU--GGGAU-AA-CCUCC-G-GAAA-CGG-AAG-CUAAUACC-G-GAU-AC---G-A-ACC-G--C--G--GAG---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------CUC--U-A--G--CG-GUUGGAAA--GA-----------------------ACU----------------------UC-G--G----------UC----------AAGG---AUG-G-ACUCGCGG-CCU--A------UC-A-G-GU-A-G---UUGGUG-AG-G-UAAC-G--CUCACCAA-GCCU-ACG-ACGGGUAGCCGGCCU-G-AG-------------A-GGGU-GACC-GGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCA--------------------CAAU-GGGC-GCAA-GCCUGAUGCAGCAACGCCGCG-UGA-GG-GA-UGAC-GGCC--UU-CG-GG-UUGUAAA------------------------CCUCUUUU-AG-UAGG-GAA-G--A-A-GC-------------------------G-AA-A---------------------GU-GA-CGGU-A-C-CU--G-CAG---------AA-AAAGC-ACC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GGUGCG-A-GCG-UUGUC-CGGAAUUAUUGGGCGUAAAGAGCUCG-UAG-G-CGGUCU-GUCGCG-UCUG-CUGUG-AAA-AC-CCGAGG-CUC-AA-CCUCGG-GCC-U-------------------------------------------GC-A-G----------------------------------------------UGGG-UAC-GGGCA-GAC-U-A-G-AG-UG-----CGGUAG-GGGAG-AAU-GGAAUU-CCU--------------------GGU-GUA-GCG-GUGGAA-UG-C-GCAGAU-AUCAGGAGG-AAC-A-CCGA--U-G-GCGAAGGCAG--UUCUCUG------GGCCG--------------------------------------------------------------UAA-CU--GACG-----CUGA-GG--AGCGAAA-G-C-GUGGG-GAGC-GAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGUUG-GGCG-CUAGAUG-UGGGGACC----AUUCCA-C--------------------------------G-GUUUCCG-UGUC-GCA-GCUAACGCAU-UAA-GCGC-CCCGCCUG-GGGAGUACGGCC-GCAA-GGCU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GCGGAG-CA-UGCGGA-UUAAUUC-G-AUGCAACG-CGAAG-AA-CCUUA-CCAAGGC-UUGACA-UA------------C-ACGAG------A-AC-G-G-GCCA-GAAA-U-GG-U-CAAC--U------CU-----------------------------------------UUGG----------------------------------------------------------------AC-----A---CU-CGU-G-AA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUCG-UU--CUAUG---U-U-GC-C-AG-CG--C-------------------------------GUAAUG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGGG-AACU-C-A-UAG-GAGAC-U-GCCG-GG-G-U-CAA-CUC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--UC-U-U-GGGCUUCACGCAUGCUACAAUGG-CCGGUA--C-AAA-GGGC-U-GC-A-A-U-ACCG-UA-AGGU-G-----------GA-G-CGAA-UCC-CA-A-AAAGCCG-GUC-UCAGUUCGGA-UUGAGGUC-U-GCAACUC-GACCUCA-UGAAGUCGGAGU-CGCUAGUA-AUCGC-AGA-UC-AGCAAC-GCUGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-AAG--UCAUGAAA-GUCGGUAACACCC-GAAG-CCGG-UGG-C-CC-AA-CC----------------------------------CUU-GU-------------------------------------GGAGG-G-AGCCGU-CGAAGGUGGGAUCGG-UG-AUU-AGGACU-AAGUCGUAACAAGGUAGCCGUACCGGAAGGUG-CGGC-UGGAUCACCUCCUUUCU--------------------------------------------------------------------------------------
+>NosMusco Nostoc muscorum
+---------------------------------GAAACGGAGAGUUU-GAU-CCUGGCUCAGGAUGAAC-GC-UGGC-GGU-A-UG--C-UUAACACAU-GCAAGU-CGA-ACGG-UC--------------------------------------------------------UC----------------------------------UUCG----------------------------------GA----------------------------------------------------------GA--UAG-UGG-C-GG--A-CGGGUGAGU---AAC-GCGUGAG-A-A--UCU-AG-CUUCAGGU-CG--GGGAC-AA-CCACU-G-GAAA-CGG-UGG-CUAAUACC-G-GAU-GU--------------------GCC---------------------------------------------------------------------------------------------G-AAA------------------------------------------------------------------------------------GGU-----------------GAAA--GA-----------------------UUUA---------------------UU-G--C----------CU----------GAAG---AUG-A-GCUCGCGU-CUG--A------UU-A-G-CU-A-G---UUGGUG-UG-G-UAAG-AG-CGCACCAA-GGCG-ACG-AUCAGUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUUUUCCG--------------------CAAU-GGGC-GAAA-GCCUGACGGAGCAAUACCGCG-UGA-GG-GA-GGAA-GGCU--CU-UG-GG-UUGUAAA------------------------CCUCUUUU-CU-CAGG-GAA-U--A---A--------------------------A-AA-AA---------------------U-GA-AGGU-A-C-CU--G-AGG---------AA-UAAGC-AUC-GGCUAAC-UCCGU---GCCAGCAGCCG-CGGUAAU-AC-GGAG-GAUGCA-A-GCG-UUAUC-CGGAAUGAUUGGGCGUAAAGCGUCCG-CAG-G-UGGCAC-UGUAAG-UCUG-CUGUU-AAA-GA-GCAAGG-CUC-AA-CCUUGU-AAA-G-------------------------------------------GC-A-G----------------------------------------------UGGA-AAC-UACAG-AGC-U-A-G-AG-UA-----CGUUCG-GGGCA-GAG-GGAAUU-CCU--------------------GGU-GUA-GCG-GUGAAA-UG-C-GUAGAG-AUCAGGAAG-AAC-A-CCGG--U-G-GCGAAAGCGC--UCUGCUA------GGCCG--------------------------------------------------------------UAA-CU--GACA-----CUGA-GG--GACGAAA-G-C-UAGGG-GAGC-GAAUGGG-AUUAGAUAC-----CCCAGUAG-UCCUA-GCCGUAAACGAUG-GAUA-CUAGGCG-UGGCUUGU-----AUCGA-C--------------------------------C-CGAGCCG-UGCC-GGA-GCCAACGCGU-UAA-GUAU-CCCGCCUG-GGGAGUACGCAC-GCAA-GUGU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-UA-UGUGGU-UUAAUUC-G-AUGCAACG-CGAAG-AA-CCUUA-CCAAGAC-UUGACA-UG--------------UCGCG------A-AU-C-U-UCUU-GAAA-G-GG-A-AGAG--UG-----CC-----------------------------------------UUAG----------------------------------------------------------------GG----AG---CG-CGA-A-CA--------------------------------------------------CAGGU-GGUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUCG-UU--UUUAG---U-U-GC-C-AG-CA--U-------------------------------UAAAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AGA-GAGAC-U-GCCG-GU-G-A-CAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCAGCAU-G-CC-CCUUACG--UC-U-U-GGGCUACACACGUACUACAAUGC-UACGGA--C-AGA-GGGC-A-GC-A-A-G-CUAG-CG-AUAG-C-----------AA-G-CAAA-UCC-CG-U-AAACCGU-AGC-UCAGUUCAGA-UCGCAGGC-U-GCAACUC-GCCUGCG-UGAAGGAGGAAU-CGCUAGUA-AUUGC-AGG-UC-AG-CAU-ACUGCAGUG-AAU-UCGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGAA-GCUGGCAACGCCC-GAAG-UCAU-UAC-U-CC-AA-CUU---------------------------------UUA-G-------------------------------------GAGAGG-A-GGAUGC-CUAAGGCAGUGCUGG-UG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUACCGGAAGGUG-UGGC-UGGAUCACCUCCUUU----------------------------------------------------------------------------------------
+>BifBifi3 Bifidobacterium bifidum 2
+----------------------------------------AGAGUUU-GAU-UCUGGCUCAGGAUGAAC-GC-UGGC-GGC-G-UG--C-UUAACACAU-GCAAGU-CGA-ACGGUGA---UCC----------------------------------------------AUCAAG----------------------------------CUUG----------------------------------CUUGGU-------------------------------------------------GGU--GAU-GAG-UGG-C-GA--A-CGGGUGAGU---AAU-GCGUGAC-CGA--CCU-GC-CCCAGACU-CC--GGAAU-AG-CUCCU-G-GAAA-CGG-GUG-GUAAUGCC-G-GAU-GU---U-C-CAC-A--U-G---AUC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GUG----A--U--UG-UGG-GAAA--GA-U---------------------UCU--------------------A-UC-G--G----------CG----------UGGG---AUG-G-GGUCGCGU-CCU--A------UC-A-G-CU-U-G---UUGGUG-AG-G-UAAC-GG-CUCACCAA-GGCU-UCG-ACGGGUAGCCGGCCU-G-AG-------------A-GGGC-GACC-GGCCACAUUGGGA-CUGA-GA-UACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCA--------------------CAAU-GGGC-GCAA-GCCUGAUGCAGCGACGCCGCG-UGA-GG-GA-UGGA-GGCC--UU-CG-GG-UUGUAAA------------------------CCUCUUUU-GU-UUGG-GAG-C--A-A-GC--C----------------------U-UC-G-------------------G-GU-GA-GUGU-A-C-CU--U-UCG---------AA-UAAGC-GCC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GGCGCA-A-GCG-UUAUC-CGGAUUUAUUGGGCGUAAAGGGCUCG-UAG-G-CGGCUC-GUCGCG-UCCG-GUGUG-AAA-GU-CCAUCG-CUU-AA-CGGUGG-AUC-U-------------------------------------------GC-G-C----------------------------------------------CGGG-UAC-GGGCG-GGC-U-G-G-AG-UG-----CGGUAG-GGGAG-ACU-GGAAUU-CCC--------------------GGU-GUA-ACG-GUGGAA-UG-U-GUAGAU-AUCGGGAAG-AAC-A-CCGA--U-G-GCGAAGGCAG--GUCUCUG------GGCCG--------------------------------------------------------------UCA-CU--GACG-----CUGA-GG--AGCGAAA-G-C-GUGGG-GAGC-GAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGGUG-GACG-CUGGAUG-UGGGGCAC--GU--UCC---------------------------------ACG-UGUUCCG-UGUC-GGA-GCUAACGCGU-UAA-GCGU-CCCGCCUG-GGGAGUACGGCC-GCAA-GGCU-AAA-ACUC-AAA-GAAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GCGGAG-CA-UGCGGA-UUAAUUC-G-AUGCAACG-CGAAG-AA-CCUUA-CCUGGGC-UUGACA-UG------------U-UCCCG------A-CG-A-C-GCCA-GAGA-U-GG-C-GUUU--C------CC-----------------------------------------UUCG----------------------------------------------------------------GG-----G---CG-GGU-U-CA--------------------------------------------------CAGGU-GGUGCAUGGUCGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUCG-CC--CCGUG---U-U-GC-C-AG-CA--C-------------------------------GUUAUG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUGGG-AACU-C-A-CGG-GGGAC-C-GCCG-GG-G-U-UAA-CUC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AGAUCAUCAU-G-CC-CCUUACG--UC-C-A-GGGCUUCACGCAUGCUACAAUGG-CCGGUA--C-AGC-GGGA-U-GC-G-A-C-AUGG-CG-ACAU-G-----------GA-G-CGGA-UCC-CU-G-AAAACCG-GUC-UCAGUUCGGA-UCGGAGCC-U-GCAACCC-GGCUCCG-UGAAGGCGGAGU-CGCUAGUA-AUCGC-GGA-UC-AGCAGC-GCCGCGGUG-AAU-GCGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-AAG--UCAUGAAA-GUGGGCAGCACCC-GAAG-CCGG-UGG-C-CU-AA-CCC---------------------------------CUU-GU------------------------------------GGGAUG-G-AGCCGU-CUAAGGUGAGGCUCG-UG-AUU-GGGACU-AAGUCGUAACAAGGUAGCCGUACCGGAAGGUG-CGGC-UGGAUCACCUCCUUUCU--------------------------------------------------------------------------------------
+>SrrIsol2 str isolate 1482/89
+---------------------------------AAACUGGAGAGUUU-GAU-UCUGGCUCAGAUUGAAC-GC-UGGC-GGC-G-UG--C-UUAACACAU-GCAAGU-CGA-ACGU-GAA--AG--------------------------------------------------U-C----------------------------------UUCG----------------------------------G-G----------------------------------------------------AUGAGUA--AAG-UGG-C-GC--A-CGGGUGAGU---AAC-GCGUGGA-UAA--UCU-AC-CUUCGAGA-CG--GGGAU-AA-CGGCU-G-GAAA-CGG-UCG-CUAAUACC-G-GAU-AA---C-C-AUU-A--U-----GGU---------------------------------------------------------------------------------------------A-AAAA-----------------------------------------------------------------------------------GUU-------G--UA-GUG-CAAA-GGG-U-AG-C--C-UCUG--------UAUG--------U--AA---CGUA-UC-G--C----------UU----------GAAG---AUG-A-GUCCGCGU-CCC--A------UU-A-G-CU-A-G---UUGGUG-AG-G-UAAA-UG-CUCACCAA-GGCG-AUG-AUGGGUAGCCGAUCU-A-AG-------------A-GGAU-AAUC-GGCCACACUGGAA-CUGG-AA-CACG-GUCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCG--------------------CAAU-GGGC-GAAA-GCCUGACGCAGCGACGCCGCG-UGA-GG-GA-UGAA-GGUC--UU-UG-GA-UCGUAAA------------------------CCUCUGUC-AG-GGGG-GAA-G--A---AA-UGGA-UGGGCU-------C-----U-AA-UA----G---GG-UCUA-UUU-UU-GA-CGGU-A-C-CC--C-CAG---------AG-GAAGC-ACC-GGCUAAC-UCCGU---GCCAGCAGCCG-CGGUAAU-AC-NGAN-NGUGCA-A-GCG-UUAAU-CGGAAUUACUGGGCGUAAAGCGCGCG-UAG-G-UGGUUA-UAUAAG-UCAG-GGGUG-AAA-GC-CCACCG-CUU-AA-CGGUGG-AAC-A-------------------------------------------GC-C-U----------------------------------------------UUGA-UAC-UGUAU-AAC-U-U-G-AG-UA-----UCGGAG-AGGGU-GGC-GGAAUU-CCA--------------------GGU-GUA-GGG-GUGAAA-UC-C-GUAGAU-AUCUGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGG--CCACCUG------GACGA--------------------------------------------------------------UAA-CU--GACA-----CUGA-GG--UGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCUGUAAACGAUG-GGUG-CUAGGUG-CUGGGGA-------GUUA------------------------------------UCUUCGG-UGCC-GUA-GCUAACGCGU-UAA-GCAC-CCCGCCUG-GGGAGUACGGUC-GCAA-GGCU-GAA-ACUC-AAA-GAAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-UA-UGUGGU-UUAAUUC-G-AUGCAACG-CGAAG-AA-CCUUA-CCCAGGC-UUGACA-UC--------------UGAGG------G-AC-U-C-UUAA-GAGA-U-UA-A-GAGG--UGC----CU-----------------------------------------UUCG----------------------------------------------------------------GG---GAG---CC-UCA-A-GA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGCC-GUGA-GGUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUA-UC--UUUAG---U-U-GC-C-AU-CA--A-------------------------------GUAAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AGA-GAGAC-U-GCUC-CG-G-U-UAA-CGG-G--GAGG-A-AGG-U-GGGG-ACGACGUC--AAGUCAUCAU-G-GC-CCUUACG--CC-U-G-GGGCUACACACGUACUACAAUGG-UGCACA--C-AAA-GGGC-A-GC-A-A-G-ACCG-CA-AGGU-G-----------GA-G-CCAA-UCC-CA-A-AAAAUGC-AUC-UCAGUCCGGA-UUGGAGUC-U-GCAACUC-GACUCCA-UGAAGUCGGAAU-CGCUAGUA-AUCCG-AGA-UC-AG-CAU-GCUCGGGUG-AAU-GCGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCACGAAA-GUUGGUUUUACCC-AAAG-CCGG-CGA-G-CU-AA-CGA---------------------------------GCA-A-------------------------------------UCGAGG-C-AGUCGU-CUACGGUAGGGCUAA-UG-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCCUUU----------------------------------------------------------------------------------------
+>DeuDesu2 Desulfovibrio desulfuricans
+--------------------------------UGAACUGGAGAGUnU-GAU-UCUGGCUCAGAUUGAAC-GC-UGGC-GGC-G-UG--C-UUAACACAU-GCAAGU-CGA-ACGC-GAA--AGG-------------------------------------------------GAC----------------------------------UUCG----------------------------------GUC----------------------------------------------------CUGAGUA--AAG-UGG-C-GC--A-CGGGUGAGU---AAC-GCGUGGA-UAA--UCU-GC-CCUUAUGA-UC--GGGAU-AA-CAGUU-G-GAAA-CGG-CUG-CUAAUACC-G-GAU-AC---G-C-UCA-A--------AAU---------------------------------------------------------------------------------------------G-AAC------------------------------------------------------------------------------------UUU----------UU-GAG-GAAA--GA-U-GG-C--C-UCUG--------CUUG--------C--AU---GCUA-UC-A--C----------GU----------AAGG---AUG-A-GUCCGCGU-CCC--A------UU-A-G-CU-U-G---UUGGCG-GG-G-UAAC-GG-CCCACCAA-GGCA-UCG-AUGGGUAGCCGAUUU-G-AG-------------A-GGAU-GAUC-GGCCACACUGGAA-CUGA-AA-CACG-GUCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCG--------------------CAAU-GGGC-GAAA-GCCUGACGCAGCGACGCCGCG-UGA-GG-GA-UGAA-GGUU--UU-CG-GA-UCGUAAA------------------------CCUCUGUC-AG-AAGG-GAA-G--A---AA-CUAC-GUUGUG-------C-----U-AA-UC--------AG-CAGC-GUA-CU-GA-CGGU-A-C-CU--U-CAA---------AG-GAAGC-ACC-GGCUAAC-UCCGU---GCCAGCAGCCG-CGGUAAU-AC-GGAG-GGUGCA-A-GCG-UUAAU-CGGAAUUACUGGGCGUAAAGCGCACG-UAG-G-CUGUAG-UGUAAG-UCAG-GGGUG-AAA-UC-CCACGG-CUC-AA-CCGUGG-AAC-U-------------------------------------------GC-C-U----------------------------------------------UUGA-UAC-UGCAC-AAC-U-U-G-AA-UC-----CGGGAG-AGGGU-GGC-GGAAUU-CCA--------------------GGU-GUA-GGA-GUGAAA-UC-C-GUAGAU-AUCUGGAGG-AAC-A-UCAG--U-G-GCGAAGGCGG--CCACCUG------GACCG--------------------------------------------------------------GUA-UU--GACG-----CUGA-GG--UGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCUGUAAACGAUG-GAUG-CUAGAUG-UCGGGGA-------GUAU------------------------------------UCUUCGG-UGUC-GUA-GUUAACGCGU-UAA-GCAU-CCCGCCUG-GGGAGUACGGUC-GCAA-GGCU-GAA-ACUC-AAA-GAAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-UA-UGUGGU-UUAAUUC-G-AUGCAACG-CGAAG-AA-CCUUA-CCUAGGU-UUGACA-UC--------------CACGG------A-AC-C-C-UCCC-GAAA-A-GG-A-GGGG--UGC----CC-----------------------------------------UUCG----------------------------------------------------------------GG---GAG---CC-GUG-A-GA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CCUA-UG--GAUAG---U-U-GC-C-AG-CA--A-------------------------------GUAAUG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AUU-CAGAC-U-GCCC-GG-G-U-UAA-CCG-G--GAGG-A-AGG-U-GGGG-ACGACGUC--AAGUCAUCAU-G-GC-CCUUACG--CC-U-A-GGGCUACACACGUACUACAAUGG-CGCGCA--C-AAA-GGGG-A-GC-G-A-G-ACCG-CG-AGGU-G-----------GA-G-CCAA-UCC-CA-A-AAAACGC-GUC-CCAGUCCGGA-UUGCAGUC-U-GCAACUC-GACUGCA-UGAAGUUGGAAU-CGCUAGUA-AUUCG-AGA-UC-AG-CAU-GCUCGGGUG-AAU-gCGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCACGAAA-GUCGGUUUUACCC-GAAG-CCGG-UGA-G-CC-AA-CCA---------------------------------GCA-A-------------------------------------UGGAGG-C-AGCCGU-CUACGGUAGGGCCGA-UG-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCCUUU----------------------------------------------------------------------------------------
+>PelPropi Pelobacter propionicus
+----------------------------------------AGAGUUU-GAU-NNUGGCUCAGAACGAAC-GC-UGGC-GGC-G-UG--C-CUAACACAU-GCAAGU-CGA-ACGG-GA---UUA-----------------------------------------------AGGGG----------------------------------CUUG----------------------------------CUCCU--------------------------------------------------UAA--UC--UAG-UGG-C-GC--A-CGGGUGAGU---AAC-GCGUAGA-UAA--UCU-GC-CUGAUGAU-CA--GGAAU-AA-CACUU-C-GAAA-GAG-GUG-CUAAUACC-U-GAU-AA---G-C-CCA-C--G-AC--GGC---------------------------------------------------------------------------------------------U-UUG------------------------------------------------------------------------------------GUC--G-U--U--GC-GGG-AAAA--GG-G-GG-G-GA-C-C---------AUUU-----------GG---CCUU-CU-G--U----------CA----------UCAG---AUG-A-GUCUGCGU-ACC--A------UU-A-G-CU-A-G---UUGGUA-GG-G-UAAA-GG-CCUACCAA-GGCG-ACG-AUGGUUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACACUGGAA-CUGA-GA-CACG-GUCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUUUUGCG--------------------CAAU-GGGC-GAAA-GCCUGACGCAGCAACGCCGCG-UGA-GU-GA-UGAA-GGCU--UU-CG-GG-UCGUAAA------------------------GCUCUGUC-AA-GGGG-AAA-G--A---AG-UGUA-UUGUGG-------U-----U-AA-UA----C---CC-AUGG-UAC-UU-GA-CGGU-A-C-CC--C-UGA---------AG-GAAGC-ACC-GGCUAAC-UCCGU---GCCAGCAGCCG-CGGUAAU-AC-GGGG-GGUGCA-A-GCG-UUGUU-CGGAAUUAUUGGGCGUAAAGCGCGUG-UAG-G-CGGUUU-GUUAAG-UCUG-AUGUG-AAA-GC-CCUGGG-CUC-AA-CCCAGG-AAG-U-------------------------------------------GC-A-U----------------------------------------------UGGA-UAC-UGGCA-GAC-U-U-G-AA-UA-----CGGGAG-AGGGU-AGU-GGAAUU-CCU--------------------GGU-GUA-GGA-GUGAAA-UC-C-GUAGAU-AUCAGGAGG-AAC-A-CCGG--U-G-GCGAAGGCGG--CUACCUG------GACCG--------------------------------------------------------------AUA-UU--GACG-----CUGA-GA--CGCGAAA-G-C-GUGGG-UAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AGUA-CUAGGUG-UUGCGGGU-----AUUGA-C--------------------------------C-CCUGCAG-UGCC-GCA-GCUAACGCAU-UAA-GUAC-UCCGCCUG-GGAAGUACGGUC-GCAA-GACU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-ACGCAACG-CGCAG-AA-CCUUA-CCUGGGC-UUGACA-UC--------------CACGG------A-AC-C-C-UCCC-GAAA-C-GG-A-GGGG--UGC----CC-----------------------------------------UUCG----------------------------------------------------------------GG---GAG---CC-GUG-A-GA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CCUA-UC--CUCAG---U-U-GC-C-AU-CA--U--------------------------------UAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-GUG-GAGAC-U-GCCG-GU-G-U-CAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUAUG--UC-C-A-GGGCUACACACGUGCUACAAUGG-CCGGUA--C-AAA-GAGU-A-GC-G-A-A-GCCG-CG-AGGU-U-----------GA-G-CCAA-UCU-CA-U-AAAGCCG-GUC-UCAGUUCGGA-UUGGAGUC-U-GCAACUC-GACUCCA-UGAAGUUGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCACGGGA-GUCGAUUGGUCCC-GAAG-UGCG-UGA-G-CU-AA-CCC---------------------------------GCA-A-------------------------------------GGGAGG-C-AGCGUC-CUAAGGAAUGGUCGG-UG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCCUUUNN--------------------------------------------------------------------------------------
+>PelAcety Pelobacter acetylenicus
+----------------------------------------AGAGUUU-GAU-NNUGGCUCAGAACGAAC-GC-UGGC-GGC-G-UG--C-UUAACACAU-GCAAGU-CGA-ACGU-GAA--AGG-------------------------------------------------GAC----------------------------------UUCG----------------------------------GUC----------------------------------------------------CUGAGUA--AAG-UGG-C-GC--A-CGGGUGAGU---AAC-ACGUGGA-UAA--UCU-AC-CCGAUGGA-CC--GGGAU-AA-CACUU-C-GAAA-GGG-GUG-CUAAUACC-G-GAU-AA---G-C-CCA-C--A-GG--CUC---------------------------------------------------------------------------------------------C-CUG------------------------------------------------------------------------------------GAG--C-U--U--GC-GGG-AAAA--GG-U-GG-G-GA-C-C---------UUCG-----------GG---CCUA-CU-G--U----------CA----------UCGG---AUG-A-GUCCGCGG-CCC--A------UU-A-G-CU-A-G---UUGGUA-GG-G-UAAU-GG-CCUACCAA-GGCA-ACG-AUGGGUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACACUGGAA-CUGA-GA-CACG-GUCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUUUUGCG--------------------CAAU-GGGG-GAAA-CCCUGACGCAGCAACGCCGCG-UGA-GU-GA-UGAA-GGCU--UU-CG-GG-UCGUAAA------------------------GCUCUGUC-AG-AGGG-GAA-G--A---AA-CCCC-UGCAGG-------A-----U-AA-CA----C---CC-UGCA-GGA-UU-GA-CGGU-A-C-CC--U-CAA---------AG-GAAGC-ACC-GGCUAAC-UCCGU---GCCAGCAGCCG-CGGUAAU-AC-GGAG-GGUGCA-A-GCG-UUGUU-CGGAAUUAUUGGGCGUAAAGCGCGUG-UAG-G-CGGUCU-GUUAAG-UCUG-AUGUG-AAA-GC-CCCGGG-CUC-AA-CCCGGG-AAG-U-------------------------------------------GC-A-U----------------------------------------------UGGA-UAC-UGGCA-GAC-U-U-G-AG-UA-----CGGGAG-AGGGA-AGU-GGAAUU-CCG--------------------GAU-GUA-GGG-GUGAAA-UC-C-GUAGAU-AUUCGGAGG-AAC-A-CCGG--U-G-GCGAAGGCGG--CUUCCUG------GACCG--------------------------------------------------------------AUA-CU--GACG-----CUGA-GA--CGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-GGCA-CUAGGUG-UCGCGGGU-----AUUGA-C--------------------------------C-CCUGCGG-UGCC-GAA-GCUAACGCAU-UAA-GUGC-CCCGCCUG-GGGAGUACGGCC-GCAA-GGCU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-ACGCAACG-CGCAG-AA-CCUUA-CCUGGGC-UUGACA-UC--------------CCGAU---CG-U-AC-U-U-GCUG-GAAA-C-AG-U-GAGG--UC-----AG-----------------------------------------UUCGG---------------------------------------------------------------CU----GG---AU-CGG-U-GA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-UC--CUUAG---U-U-GC-C-AG-CA--U--------------------------------UUGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AAG-GAGAC-U-GCCG-GU-G-U-UAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUAUG--UC-C-A-GGGCUACACACGUGCUACAAUGG-CCGGUA--C-AAA-GGGC-A-GC-A-A-U-ACCG-CA-AGGU-G-----------GA-G-CGAA-CCC-CA-A-AAAGCCG-GUC-UCAGUUCGGA-UUGGAGUC-U-GCAACUC-GACUCCA-UGAAGUUGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCACGGGA-GUUGAUUGUACCU-GAAA-UCGG-UGG-G-CU-AA-CC----------------------------------UUC-G--------------------------------------GGAGG-C-AGCCGC-UUAUGGUAUGGUCGG-UA-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCCUUUNN--------------------------------------------------------------------------------------
+>RhtMarin Rhodothermus marinus
+-----------------------------CCUUACUACGGAGAGUUU-GAU-CCUGGCUCAGGGCGAAC-GC-UGGC-GGC-G-GG--C-CUAACACAU-GCAAGU-CGU-ACGC-GG---GUU-----------------------------------------------CUCCU----------------------------------UUC-----------------------------------GGGAG--------------------------------------------------AACUGCC--GAG-UGG-C-GA--A-CGGGUGCGU---AAC-GCGUAGG-UAA--CCU-GC-CCUCGAGU-GG--GGGAU-AA-CUCCG-G-GAAA-CCG-GGG-CUAAUACC-G-CAU-AU---U-G-UCC-C--G-GG--ACC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GGC--U-C--C--GG-GAU-GAAA--GC-C-C-------------------UCU-------------------GG-GC-G--C----------UC----------GAGG---AUG-G-GCCUGCGU-CGG--A------UU-A-G-CU-A-G---UUGGUG-GG-G-UAAC-GG-CCCACCAA-GGCG-ACG-AUCCGUAGCUGGUCU-G-AG-------------A-GGAC-GACC-AGCCACACUGGCA-CUGA-GA-CACG-GGCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUCUUGGG--------------------CAAU-GGGC-GAAA-GCCUGACCCAGCCACGCCGCG-UGG-AG-GA-UGAA-GCUC--UU-CG-GG-GUGUAAA------------------------CUCCUUUU-CU-GGGG-GAA-G--A---AA--UCC-CGGC---------------U-CU-G------------GUCG-GGA-CU-GA-CGGU-A-C-CC--C-AGG---------AA-UAAGC-GCC-GGCUAAC-UCCGU---GCCAGCAGCCG-CGGUAAU-AC-GGAG-GGCGCA-A-GCG-UUGCC-CGGAAUCACUGGGUGUAAAGGGUGCG-UAG-G-CGGGGC-UGUAAG-UCAG-AGGUG-AAA-GC-CUCCGG-CUC-AA-CCGGAG-AAU-U-------------------------------------------GC-C-U----------------------------------------------CUGA-UAC-UGCAG-CUC-U-U-G-AG-UC-----CCGGAG-AGGCC-GCU-GGAAUU-CCU--------------------GGU-GUA-GCG-GUGAAA-UG-C-GUAGAU-AUCAGGAGG-AAC-A-CCGG--A-G-GCGAAGGCGG--GCGGCUG------GACGG--------------------------------------------------------------GGA-CU--GACG-----CUGA-GG--CACGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-GAUG-CUCGGCG-UUGCCGCC------UUCG----------------------------------G-GCGGCAG-UGCC-UAA-GCUAACGCGG-UAA-GCAU-CCCACCUG-GGGAGUACGGCC-GCAA-GGUU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGC-UUAAUUC-G-AUGCUACG-CGAGG-AA-CCUUA-CCUGGGC-UCGAAC-AC------------C-ACCGG------A-CA-G-C-CCCC-GAAA-G-GG-G-GUCU--C------CC-----------------------------------------GCAA----------------------------------------------------------------GG-----G---CU-GGU-G-GU--------------------------------------------------GAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGCC-GUGA-GGUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CCUA-CC--GCCAG---U-U-AC-C-AG-CG--G-------------------------------GUAAUG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGGG-GACU-C-U-GGC-GGGAC-U-GCCU-GC-G---CAA-GCA-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCAUCAU-G-GC-CCUUACG--CC-C-A-GGGCUGCACACGUGCUACAAUGG-CCGGUA--C-AAU-GGGC-A-GC-C-A-C-CCCG-CG-AGGG-G-----------GA-G-CGAA-UCC-CU---AAAGCCG-GUC-UCAGUUCGGA-UUGGAGUC-U-GCAACUC-GACUCCA-UGAAGCCGGAAU-CGCUAGUA-AUCGC-GCA-UC-AG-CUACGGCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-AAC--CCAUGGGA-GCCGGGGGCGCCC-GAAG-UCCG-UGA-C-CC-AA-CCUGC-------------------------------UUC-G-----------------------------------GCGGGAGG-G-AGCGGC-CUAAGGCGAACCCGG-UG-ACU-GGGGGU-AAGUCGUAACAAGGUAGCCGUACGGGAACGUG-CGGC-UGGAUCACCUCCUA-----------------------------------------------------------------------------------------
+>BacFrag2 Bacteroides fragilis 2
+---------------------------ACUUUUACAAUGAAGAGUUU-GAU-CCUGGCUCAGGAUGAAC-GC-UAGC-UAC-A-GG--C-UUAACACAU-GCAAGU-CGA-GGG--GCAU-CAG-------------G-------------------------------AAGAAAG----------------------------------CUUG----------------------------------CUUUCUUU---------------------------------------------G-CUG--GC--GAC-CGG-C-GC--A-CGGGUGAGU---AAC-ACGUAUC-CAA--CCU-GC-CCUUUACU-CG--GGGAU-AG-CCUUU-C-GAAA-GAA-AGA-UUAAUACC-C-GAU-AG---C-A-UAA-U--G-AU--UCC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GGU--U-U--C--AU-UAU-UAAA--GG-----------------------AUU----------------------CC-G--G----------UA----------AAGG---AUG-G-GGAUGCGU-UCC--A------UU-A-G-GU-N-G---UUGGUG-AG-G-UAAC-GG-CUCACCAA-GCCU-UCG-AUGGAUAGGGGUUCU-G-AG-------------A-GGAA-GGUC-CCCCACAUUGGAA-CUGA-GA-CACG-GUCCAAA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGAGG-AAUAUUGGU--------------------CAAU-GGGC-GCUA-GCCUGAACCAGCCAAGUAGCG-UGA-AG-GA-UGAA-GGCUC-UA-UG-GG-UCGUAAA------------------------CUUCUUUU-AU-AUAA-GAA-U--A---AA-GUGC-AGUA---------------U-GU-A------------UACU-GUU-UU-GU-AUGU-A-U-UA--U-AUG---------AA-UAAGG-AUC-GGCUAAC-UCCGU---GCCAGCAGCCG-CGGUAAU-AC-GGAG-GAUCCG-A-GCG-UUAUC-CGGAUUUAUUGGGUUUAAAGGGAGCG-UAG-G-UGGACU-GGUAAG-UCAG-UUGUG-AAA-GU-UUGCGG-CUC-AA-CCGUAA-AAU-U-------------------------------------------GC-A-G----------------------------------------------CUGA-UAC-UGUCA-GUC-U-U-G-AG-UA-----CAGUAG-AGGUG-GGC-GGAAUU-CGU--------------------GGU-GUA-GCG-GUGAAA-UG-C-UUAGAU-AUCACGAAG-AAC-U-CCGA--U-U-GCGAAGGCAG--CUCACUG------GACUG--------------------------------------------------------------CAA-CU--GACA-----CUGA-UG--CUCGAAA-G-U-GUGGG-UAUC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-ACAGUAAACGAUG-AAUA-CUCGCUG-UUUGCG-------AUAUA-C-----------------------------------AGUAAG-CGGC-CAA-GCGAAAGCAU-UAA-GUAU-UCCACCUG-GGGAGUACGCCG-GCAA-CGGU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GAGGAA-CA-UGUGGU-UUAAUUC-G-AUGAUACG-CGAGG-AA-CCUUA-CCCGGGC-UUAAAU-UG------------C-AGUGG------A-AU-G-A-UGUG-GAAA-C-AU-G-UCAG--U------GA-----------------------------------------GCAA----------------------------------------------------------------UC-----A---CC-GCU-G-UG--------------------------------------------------AAGGU-GCUGCAUGGUUGUCGUCA-GCUCGUGCC-GUGA-GGUGU-CGGC-UUAA-GU-GCCAUAAC-GAGCGCAACC-CUUA-UC--UUUAG---U-U-AC-U-AA-CA--G-------------------------------GUUAUG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CUGAG-GACU-C-U-AGA-GAGAC-U-GCCG-UC-G---UAA-GAU-GU-GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAGCAC-G-GC-CCUUACG--UC-C-G-GGGCUACACACGUGUUACAAUGG-GGGGUA--C-AGA-AGGC-A-GC-U-A-G-CGGG-UG-ACCG-U-----------AU-G-CUAA-UCC-CA---AAAUCCU-CUC-UCAGUUCGGA-UCGAAGUC-U-GCAACCC-GACUUCG-UGAAGCUGGAUU-CGCUAGUA-AUCGC-GCA-UC-AGCCAC-GGCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-AAG--CCAUGGGA-GCCGGGGGUACCU-GAAG-UACG--------U-AA-CC----------------------------------GCA-A--------------------------------------GGAU------CGUC-CUAGGGUAAAACUGG-UG-ACU-GGGGCU-AAGUCGUAACAAGGUAGCCGUACCGGAAGGUG-CGGC-UGGAACACCUCCUUUCU--------------------------------------------------------------------------------------
+>CloFervi Clostridium fervidus
+-------------------------------------------GUUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-CUAACACAU-GCAAGU-CGA-GCGG-AG---AGG-------------G-------------------------------CGAGGGG----------------------------------GUUU----------------------------------ACUCU-GAG----------------------------------------------CCU--CU--UAG-CGG-C-GG--A-CGGGUGAGU---AAC-ACGUGGG-UAA--CCU-AC-CCCAAGGA-GG--GGGAU-AA-CAGGU-C-GAAA-GGC-CUG-CUAAUACC-G-CAU-AA---A-G-CUA-C--U-GG--GGC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GCU--U-U--G--GU-AGC-CAAA--GG-A-GC------------------GAUA-----------------GCU-CC-G--C----------CU----------UGGG---AUG-G-GCCCGCGG-CCC--A------UU-A-G-CU-A-G---UUGGUG-AG-G-UAAC-GG-CUCACCAA-GGCG-ACG-AUGGGUAGCCGGCCU-G-AG-------------A-GGGU-GGUC-GGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCG--------------------CAAU-GGGG-GAAA-CCCUGACGCAGCGACGCCGCG-UGA-GC-GA-AGAA-GGCC--UU-CG-GG-UCGUAAA------------------------GCUCUGUC-UU-CCCU-GAC-G--A---A--------------------------G-GA-AG---------------------U-GA-CGGU-A-A-GG--G-AGG---------AG-GAAGC-CAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GUGGCG-A-GCG-UUGUC-CGGAAUUACUGGGCGUAAAGGGUGCG-UAG-G-CGGCCC-CUUAAG-UGAG-GUGUG-AAA-UC-CCUGGG-CUC-AA-CCCAGG-AAC-U-------------------------------------------GC-A-C----------------------------------------------UUCA-AAC-UGGGG-GGC-U-A-G-AG-UG-----CAGGAG-AGGAA-AGC-GGAAUU-CCC--------------------GGU-GUA-GCG-GUGAAA-UG-C-GUAGAG-AUCGGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGG--CUUUCUG------GACUG--------------------------------------------------------------CAA-CU--GACG-----CUGA-GG--CACGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCUGUAAACGAUG-GGUG-CUAGGUG-UGGGGGGC------GUA-----------------------------------G-CCUUCCG-UGCC-GUA-GUUAACACAU-UAA-GCAC-CCCGCCUG-GGGAGUACGGUC-GCAA-GACU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCA-GCGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCAGGGC-UUGACA-UC--------------CACCG------A-AC-C-C-UGUG-GAAA-C-AC-G-GGGG--UGCC---CC-----------------------------------------UUAU----------------------------------------------------------------GG--GGAG---CG-GUG-A-GA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CCUA-UC--GUUAG---U-U-GC-C-AG-CA--C-------------------------------UUCGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUGGG-CACU-C-U-AAC-GAGAC-U-GCCA-GG-G-U-UAA-CCU-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--CC-C-U-GGGCUACACACGUGCUACAAUGG-CCACUA--C-AGA-GAGA-A-GC-G-A-A-CCCG-CG-AGGG-G-----------GA-G-CGAA-AUC-UU-G-AAAGGUG-GUC-CCAGUUCGGA-UUGCAGGC-U-GCAACUC-GCCUGCA-UGAAGCCGGAGU-UGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGAGA-GCCGGCAACACCC-GAAG-CCAG-UGG-G-CU-AA-CCC---------------------------------GAA-A--------------------------------------GGAGG-C-AGCUGU-CGAAGGUGGGGCUGG-UG-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGAGAACCUG-CGGC-UGGAUCACCUCC-------------------------------------------------------------------------------------------
+>ClrIndic Caldoanaerobacter indicus
+----------------------------------------AGAGUUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-CUAACACAU-GCAAGU-CGA-GCGG-AG---GGG---------------------------------------------GUAGGAG----------------------------------CUUN----------------------------------CUCCUUG------------------------------------------------AAC--CU--UAG-CGG-C-GG--A-CGGGUGAGU---AAC-ACGUGGG-UAA--CCU-GC-CCUUGAGA-GG--GGGAU-AA-CAGGU-C-GAAA-GGC-CUG-CUAAUACC-G-CAU-AA---U-G-CUA-A--G-AU--GCC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GGC--G-U--C--UU-AGC-CAAA--GG-U---------------------UAAU-------------------U-CC-G--C----------UC----------AAGG---AUG-G-GCCCGCGG-CCC--A------UU-A-G-CU-A-G---UUGGUG-AG-G-UAAU-GG-CUCACCAA-GGCG-ACG-AUGGGUAGCCGGCCU-G-AG-------------A-GGGU-GGUC-GGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCG--------------------CAAU-GGGG-GAAA-CCCUGACGCAGCGACGCCGCG-UGA-GC-GA-UGAA-GGCC--UU-CG-GG-UUGUAAA------------------------GCUCUGUC-UU-CCCU-GAC-G------A--------------------------U-AA-U----------------------U-GA-CGGU-A-A-GG--G-AGG---------AG-GAAGC-CAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GUGGCA-A-GCG-UUGUC-CNGAAUUACUGGGCGUAAAGGGUGCG-UAG-G-CGGCUC-UUUAAG-UGGG-GUGUG-AAA-UC-CCUGGG-CUC-AA-CCCAGG-AAC-U-------------------------------------------GC-A-C----------------------------------------------UCCA-AAC-UGGAG-AGC-U-A-G-AG-UG-----CAGGAG-AGGAA-AGC-GGAAUU-CCC--------------------AGU-GUA-GCG-GUGAAA-UG-C-GUAGAG-AUUGGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGG--CUUUCUG------GACUG--------------------------------------------------------------UAA-CU--GACG-----CUGA-GG--CACGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCUGUAAACGAUG-GGUA-CUAGGUG-UAGGGGGC------GAA-----------------------------------G-CCCUCUG-UGCC-GCA-GCUAACGCAU-UAA-GUAC-CCCGCCUG-GGGAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCA-GCGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCAGGGC-UUGACA-UC--------------CACCG------A-AC-C-C-UGUG-GAAA-C-AC-G-GGGG--UGC----CC-----------------------------------------UUCG----------------------------------------------------------------GG---GAA---CG-GUG-A-GA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-CC--UUUAG---U-U-GC-C-AG-CA--C--------------------------------UUCGGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUGGG-CACU-C-U-AAA-GGGAC-U-GCCU-GG-G-U-UAA-CCA-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--CU-C-U-GGGCUACACACGUGCUACAAUGG-CCGGUA--C-AAU-GAGU-U-GC-A-A-A-CCCG-UG-AGGG-G-----------GA-G-CUAA-UCU-CA---AAAACCG-GUC-CCAGUUCGGA-UUGUAGGC-U-GCAACUC-GCCUACA-UGAAGCCGGAGU-UGCUAGUA-AUCGC-GGG-UCAAG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGGCUUGUA----CACACCGCCCGUC-ACA--CCAUGAGA-GCCGGCAACACCC-GAAG-CCAG-UGG-G-CU-AA-CCC---------------------------------GCA-A-------------------------------------GGGAGG-C-AGCUGU-UGAAGGUGGGGCUGG-UG-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGAGAACCUG-CGGC-UGGAUCACCUCCUU-----------------------------------------------------------------------------------------
+>CloCellu Clostridium cellulovorans
+--------------------------------------------UUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-UUAACACAU-GCAAGU-CGA-GCGA-UG---AAG-------------------------------------------------CCC----------------------------------UUCG----------------------------------GGG----------------------------------------------------UGG--AU--UAG-CGG-C-GG--A-CGGGUGAGU---AAC-ACGUGGG-CAA--CCU-GC-CUUAUAGA-GG--GGGAU-AG-CCUUC-C-GAAA-GGA-AGA-UUAAUACC-G-CAU-AA---G-A-UGC-A--A-UU--CUC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GAG--A-G--A--UG-UAU-CAAA--GG-A---------------------GCAA-------------------U-CC-G--C----------UA----------UAAG---AUG-G-GCCCGCGG-CGC--A------UU-A-G-CU-A-G---UUGGUG-AG-G-UAAC-GG-CUCACCAA-GGCG-ACG-AUGCGUAGCCGACCU-G-AG-------------A-GGGU-GAUC-GGCCACAUUGGAA-CUGA-GA-CACG-GUCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCA--------------------CAAU-GGGG-GAAA-CCCUGAUGCAGCAACGCCGCG-UGA-GU-GA-UGAA-GGCC--UU-CG-GG-UUGUAAA------------------------GCUCUUUG-AU-UAGG-GAC-G------A--------------------------U-AA------------------------U-GA-CGGU-A-C-CU--A-AAG---------AA-CAAGC-CAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GUGGCA-A-GCG-UUGUC-CGGAUUUACUGGGCGUAAAGGAUGUG-UAG-G-CGGAUU-UUUAAG-UGAG-AUGUG-AAA-UA-CCCGAG-CUC-AA-CUUGGG-UGC-U-------------------------------------------GC-A-U----------------------------------------------UUCA-AAC-UGGAA-GUC-U-A-G-AG-UG-----CAGGAG-AGGAA-AGU-GGAAUU-CCU--------------------AGU-GUA-GCG-GUGAAA-UG-C-GUAGAG-AUUAGGAAG-AAC-A-UCAG--U-G-GCGAAGGCGA--CUUUGUG------GACUG--------------------------------------------------------------UAA-CU--GACG-----CUGA-GG--CAUGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AAUA-CUAGGUG-UAGGGGUU-----GUCAU----------------------------------G-ACCUCUG-UGCC-GCC-GCUAACGCAU-UAA-GUAU-UCCGCCUG-GGGAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCA-GCGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCUAGAC-UUGACA-UC--------------UCCUG------A-AU-U-A-CCCG-UAAC-U-GG-G-GAAG--UUA----CCU---------------------------------------CUUUG---------------------------------------------------------------AGG---UGA---CA-GGA-A-GA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUA-UU--GUUAG---U-U-GC-U-AC-CA--U--------------------------------UUAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGAG-CACU-C-U-AGC-AAGAC-U-GCCU-GG-G-U-UAA-CCA-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--UC-U-A-GGGCUACACACGUGCUACAAUGG-CGAGUA--C-AAC-GAGA-C-GC-A-A-G-ACCG-UG-AGGU-G-----------GA-G-CAAA-UCU-AU---AAAACUC-GUC-CCAGUUCGGA-UUGUAGGC-U-GAAACUC-GCCUACA-UGAAGUUGGAGU-UGCUAGUA-AUCGC-GAA-UC-AG-CAU-GUCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGAGA-GUCGGCAACACCC-GAAG-UCCG-UGA-G-GU-AA-CC----------------------------------GUA-A--------------------------------------GGAGC-C-AGCGGC-CGAAGGUGGGGUCGA-UG-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGAGAACCUG-CGGC-UGGAUCACCUCCUUUCU--------------------------------------------------------------------------------------
+>CloParap Clostridium paraputrificum
+---------------------------------NNNNNNGAGAGUUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-CUAACACAU-GCAAGU-CGA-GCGA-UG---AAG------------------------------------------------UUCC----------------------------------UUCG----------------------------------GGAA---------------------------------------------------CGG--AU--UAG-CGG-C-GG--A-CGGGUGAGU---AAC-ACGUGGG-CAA--CCU-GC-CUUAUAGA-GG--GGAAU-AG-CCUUC-C-GAAA-GGA-AGA-UUAAUACC-G-CAU-AA---G-A-UUG-U--A-CG--UUC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GAA--G-U--A--GC-AAU-UAAA--GG-A---------------------GCAA-------------------U-CC-G--C----------UA----------UAAG---AUG-G-GCCCGCGG-CGC--A------UU-A-G-CU-A-G---UUGGUG-AG-G-UAAC-GG-CUCACCAA-GGCG-ACG-AUGCGUAGCCGACCU-G-AG-------------A-GGGU-GAUC-GGCCACAUUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCA--------------------CAAU-GGGG-GAAA-CCCUGAUGCAGCAACGCCGCG-UGA-GU-GA-UGAC-GGCC--UU-CG-GG-UUGUAAA------------------------GCUCUGUC-UU-UGGG-GAC-G------A--------------------------U-AA------------------------U-GA-CGGU-A-C-CC--A-AGG---------AG-GAAGC-CAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GUGGCA-A-GCG-UUGUC-CGGAUUUACUGGGCGUAAAGGGAGCG-UAG-G-CG-AUU-UUUAAG-UGGG-AUGUG-AAA-UA-CCCGGG-CUC-AA-CCUGGG-UGC-U-------------------------------------------GC-A-U----------------------------------------------UCCA-AAC-UGGAA-AUC-U-A-G-AG-UG-----CAGGAG-GGGAA-AGU-GGAAUU-CCU--------------------AGU-GUA-GCG-GUGAAA-UG-C-GUAGAG-AUUAGGAAG-AAC-A-CCAG--U-G-GCGAAGGCGA--CUUUCUG------GACUG--------------------------------------------------------------UAA-CU--GACG-----CUGA-GG--CUCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AAUA-CUAGGUG-UAGGGGUU-----GUCAU----------------------------------G-ACCUCUG-UGCC-GCC-GCUAACGCAU-UAA-GUAU-UCCGCCUG-GGGAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GUA-GCGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCUAGAC-UUGACA-UC--------------UCCUG------A-AU-U-A-CCAUGUAAU-G-UG-G-GAAG--UC-----CC-----------------------------------------UUCG----------------------------------------------------------------GG----GA---CA-GGA-A-GA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUA-UU--GUUAG---U-U-GC-U-AC-CA--U--------------------------------UUAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGAG-CACU-C-U-AGC-GAGAC-U-GCCC-GG-G-U-UAA-CCG-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--UC-U-A-GGGCUACACACGUGCUACAAUGG-CCGGUA--C-AAC-GAGA-U-GC-A-A-U-ACCG-UG-AGGU-G-----------GA-G-CAAA-ACU-AU---AAAACCG-GUC-UCAGUUCGGA-UUGUAGGC-U-GAAACUC-GCCUACA-UGAAGCUGGAGU-UACUAGUA-AUCGC-GAA-UC-AG-AAU-GUCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGAGA-GUUGGCAAUACCC-AAAG-UUGG-UGA-U-CU-AA-CCC---------------------------------GUA-A--------------------------------------GGAGG-A-AGCCAC-CUAAGGAUGGGUCAG-CG-AUU-GGGGU--AAGUCGUAACAAGGUAGCCGUAGGAGAACCUG-CGGN-UGGAUCACCUCCUU-----------------------------------------------------------------------------------------
+>CloCorin Clostridium corinoforum
+-----------------------------------------GAGUUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-UUAACACAU-GCAAGU-CGA-GCGA-UG---AAG------------------------------------------------UUCC----------------------------------UUCG----------------------------------GGAA---------------------------------------------------UGG--AU--UAG-CGG-C-GG--A-CGGGUGAGU---AAC-ACGUGGG-UAA--CCU-GC-CUCAUAGA-GG--GGAAU-AG-CCUUU-C-GAAA-GGA-AGA-UUAAUACC-G-CAU-AA---G-A-UUG-U--A-GU--UUC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GAA--A-C--A--GC-AAU-UAAA--GG-A---------------------GUAA-------------------U-CC-G--C----------UA----------UGAG---AUG-G-ACCCGCGU-CGC--A------UU-A-G-UU-A-G---UUGGUG-AG-G-UAAC-GG-CUCACCAA-GGCG-ACG-AUGCGUAGCCGACCU-G-AG-------------A-GGGU-GAUC-GGCCACAUUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCA--------------------CAAU-GGGG-GAAA-CCCUGAUGCAGCAACGCCGCG-UGA-GU-GA-UGAC-GGUC--UU-CG-GA-UUGUAAA------------------------ACUCUGUC-UU-CAGG-GAC-G------A--------------------------U-AA------------------------U-GA-CGGU-A-C-CU--G-AGG---------AG-GAAGC-CAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GUGGCA-A-GCG-UUGUC-CGGAUUUACUGGGCGUAAAGGGAGCG-UAG-G-UGGAUA-UUUAAG-UGGG-AUGUG-AAA-UA-CUCGGG-CUU-AA-CCUGGG-UGC-U-------------------------------------------GC-A-U----------------------------------------------UCCA-AAC-UGGAU-AUC-U-A-G-AG-UG-----CAGGAG-AGGAA-AGU-AGAAUU-CCU--------------------AGU-GUA-GCG-GUGAAA-UG-C-GUAGAG-AUUAGGAAG-AAU-A-CCAG--U-G-GCGAAGGCGA--CUUUCUG------GACUG--------------------------------------------------------------UAA-CU--GACA-----CUGA-GG--CUCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AAUA-CUAGGUG-UGGGGGUU-----GUCAU----------------------------------G-ACCUCCG-UGCC-GCC-GCUAACGCAU-UAA-GUAU-UCCGCCUG-GGGAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCA-GCGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCUAGAC-UUGACA-UC--------------UCCUG------A-AU-U-A-CUCCGUAAU-G-GA-G-GAAG--C------CC-----------------------------------------UUCG----------------------------------------------------------------GG-----G---CA-GGA-A-GA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CCUA-UU--GUUAG---U-U-GC-U-AC-CA--U--------------------------------UUAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGAG-CACU-C-U-AGC-GAGAC-U-GCCC-GG-G-U-UAA-CCG-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--UC-U-A-GGGCUACACACGUGCUACAAUGG-CUGGUA--C-AGA-AAGA-U-GC-A-A-U-ACCG-CG-AGGU-G-----------GA-G-CCAA-ACU-UU---AAAACCA-GUC-UCAGUUCGGA-UUGUAGGC-U-GAAACUC-GCCUACA-UGAAGCUGGAGU-UGCUAGUA-AUCGC-GAA-UC-AG-AAU-GUCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGAGA-GUUGGCAAUACCC-AAAG-UUCG-UGA-G-CU-AA-CC----------------------------------GUA-A--------------------------------------GGAGG-C-AGCGAC-CUAAGGUAGGGUCAG-CG-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGAGAACCU--UGCC-UGGCUGGAUCAUC------------------------------------------------------------------------------------------
+>SyeSp Synechococcus sp
+--------------------------------CAAAAUGGAGAGUUU-GAU-CCUGGCUCAGGAUGAAC-GC-UGGC-GGC-G-UG--C-UUAACACAU-GCAAGU-CGA-ACGG-GC--------------------------------------------------------UC----------------------------------UUCG----------------------------------GA----------------------------------------------------------GC--UAG-UGG-C-GG--A-CGGGUGAGU---AAC-GCGUGAG-A-A--UCU-GC-CUACAGGA-CG--GGGAC-AA-CAGUU-G-GAAA-CGA-CUG-CUAAUACC-C-GAU-GU--------------------GCC---------------------------------------------------------------------------------------------G-AGA------------------------------------------------------------------------------------GGU-----------------GAAA--CA-----------------------UUUA---------------------UG-G--C----------CU----------GUAG---AUG-A-GCUCGCGU-CUG--A------UU-A-G-CU-A-G---UUGGUG-GG-G-UAAG-GG-CCUACCAA-GGCG-ACG-AUCAGUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUUUUCCG--------------------CAAU-GGGC-GCAA-GC--GACGGAGCAACGCCGCG-UGG-GG-GA-GGAA-GGUU--UU-UG-GA-CUGUAAA------------------------CCCCUUUU-CU-CAGG-GAA-G--A---A--------------------------G-AA-AG---------------------U-GA-CGGU-A-C-CU--G-AGG---------AA-UAAGC-CUC-GGCUAAU-UCCGU---GCCAGCAGCCG-CGGUAAU-AC-GGGA-GAGGCA-A-GCG-UUAUC-CGGAAUUAUUGGGCGUAAAGCGCCUG-CAG-G-CGGUUA-AUCAAG-UCUG-UUGUC-AAA-GC-GUGGGG-CUC-AA-CCUCAU-ACA-G-------------------------------------------GC-A-A----------------------------------------------UGGA-AAC-UGAUU-GAC-U-A-G-AG-UA-----UGGUAG-GGGUA-GCG-GGAAUU-CCA--------------------GGU-GUA-GCG-GUGAAA-UG-C-GUAGAU-AUCUGGAAG-AAC-A-CCAG--C-G-GCGAAAGCGC--GCUACUG------GGCCA--------------------------------------------------------------UAA-CU--GACG-----CUCA-UG--GACGAAA-G-C-UAGGG-GAGC-GAAAGGG-AUUAGAUAC-----CCCUGUAG-UCCUA-GCCGUAAACGAUG-AACA-CUAGGUG-UUGCGUGA-----AUCGA-C--------------------------------C-CGCGCAG-UGCC-GUA-GCCAACGCGU-UAA-GUGU-UCCGCCUG-GGGAGUACGCAC-GCAA-GUUG-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-UA-UGUGGU-UUAAUUC-G-AUGCAACG-CGAAG-AA-CCUUA-CCAGGGU-UUGACA-UC--------------CCCCG------A-AU-C-U-CUUG-GAAA-C-GA-G-AGAG--UG-----CC-----------------------------------------UUCG----------------------------------------------------------------GG----AG---CG-GGG-A-GA--------------------------------------------------CAGGU-GGUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CACG-UU--UUUAG---U-U-GC-C-AU-CA--U--------------------------------UCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AGA-GAAAC-U-GCCG-GU-G-A-CAA-ACC-G--GAGG-A-AGG-U-GUGG-ACGACGUC--AAGUCAUCAU-G-CC-CCUUACA--UC-C-U-GGGCUACACACGUACUACAAUGC-UCCGGA--C-AGC-GAGA-C-GC-G-A-A-GCCG-CG-AGGU-G-----------AA-G-CAAA-UCU-CC-C-AAACCGG-GGC-UCAGUUCAGA-UUGCAGGC-U-GCAACUC-GCCUGCA-UGAAGGCGGAAU-CGCUAGUA-AUCGC-AGG-UC-AG-CAU-ACUGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGAA-GUUGGCCAUGCCC-GAAG-UCGU-UAC-C-CU-AA-CCG---------------------------------UUC-G-------------------------------------CGGAGG-G-GGGCGC-CGAAGGUAGGGCUGA-UG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUACCGGAAGGUG-UGGC-UGGAUCACCUCCUUU----------------------------------------------------------------------------------------
+>CloColla Clostridium collagenovorans
+---------------------------------------GAGAGUUU-GAU-CCUGGCUCAGGAUGAAC-GC-UGGC-GGC-G-UG--C-UUAACACAU-GCAAGU-CGA-GCGA-UG---AAG------------------------------------------------UUCC----------------------------------UUCG----------------------------------GGAA---------------------------------------------------CGG--AU--UAG-CGG-C-GG--A-CGGGUGAGU---AAC-ACGUGGG-CAA--CCU-GC-CUGUAAGU-GG--GGGAU-AG-CCCUC-C-GAAA-GGA-GGA-GUAAUACC-G-CAU-AA---G-A-UAU-U--U-UG--AUC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GGU--C-G--A--AA-UAU-UAAA--GG-A---------------------GUAA-------------------U-CC-G--C----------UU----------ACAG---AUG-G-GCCCGCGG-CGC--A------UU-A-G-CU-A-G---UUGGUG-AG-G-UAAC-GG-CUCACCAA-GGCA-ACG-AUGCGUAGCCGACCU-G-AG-------------A-GGGU-GAUC-GGCCACAUUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCG--------------------CAAU-GGGG-GAAA-CCCUGACGCAGCAACGCCGCG-UGA-GU-GA-UGAA-GGUC--UU-CG-GA-UUGUAAA------------------------GCUCUGUC-UU-AUGG-GAA-G------A--------------------------U-AA------------------------U-GA-CGGU-A-C-CA--U-AGG---------AG-GAAGC-CAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GUGGCA-A-GCG-UUGUC-CGGAUUUACUGGGCGUAAAGCAUGCG-UAG-G-CGGAUG-UUUAAG-UGAU-GUGUG-AAA-UA-CCCGGG-CUC-AA-CUUGGG-UGC-U-------------------------------------------GC-A-U----------------------------------------------GUCA-AAC-UGGAC-AUC-U-A-G-AG-UG-----CAGGAG-AGGAG-AGC-GGAAUU-CCU--------------------AGU-GUA-GCG-GUGAAA-UG-C-GUAGAG-AUUAGGAAG-AAC-A-CCAG--U-G-GCGAAGGCGG--CUCUCUG------GACUG--------------------------------------------------------------UAA-CU--GACG-----CUGA-GG--CAUGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-GGUA-CUAGGUG-UCGG-GG-------UCGA------------------------------------ACCUCGG-UGCC-GCA-GUUAACACAU-UAA-GUAU-UCCGCCUG-GGAAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGA-CCC--GC-A--CA-A-GCA-GCGACG--A-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCUAGAC-UUGACA-UC--------------UCCUG------A-AU-U-A-GUCCGUAAU-G-GA-U-GAAG--U------CC-----------------------------------------UUCG----------------------------------------------------------------GG----GA---CA-GGA-U-GA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUA-UC--AUUAG---U-U-GC-U-AA-CA--U--------------------------------UUAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGAG-CACU-C-U-AGU-GAGAC-U-GCCC-GG-G-U-UAA-CCG-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--UC-U-A-GGGCUACACACGUGCUACAAUGG-UAGGGA--C-AAA-AAGA-U-GC-U-A-U-ACCG-CA-AGGU-G-----------GA-G-CUAA-ACU-CA---AAACCCU-AUC-CCAGUUCGGA-UUGUAGGC-U-GAAACUC-GCCUACA-UGAAGCCGGAGU-UGCUAGUA-AUCGC-GAA-UC-AG-AAU-GUCGCGGUG-AAU-ACGUU-CCCGGGUCUUGUA----CACACCGCCCGUC-ACA--CCAUGAGA-GUCGGCAACACCC-GAAG-CCCG-UGA-G-GU-AA-CC----------------------------------UUU-U--------------------------------------GGAAC-C-AGCGGU-CGAAGGUGGGGUUGA-UG-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGAGAACCUG-CGGN-UGGAUCACCUCCUU-----------------------------------------------------------------------------------------
+>CloSardi Clostridium sardiniensis
+----------------------------------------GAGAUUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-CUAACACAU-GCAAGU-CGA-GCGA-UG---AAG-----------------------------------------------UUUCC----------------------------------UUCG----------------------------------GGAAA--------------------------------------------------CGG--AU--UAG-CGG-C-GG--A-CGGGUGAGU---AAC-ACGUGGG-UAA--CCU-GC-CUCAUAGA-GG--GGAAU-AG-CCUUC-C-GAAA-GGA-AGA-UUAAUACC-G-CAU-AA---C-A-UUG-C--A-GU--UUC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GAA--A-C--A--GC-AAU-UAAA--GG-A---------------------GCAA-------------------U-CC-G--C----------UA----------UGAG---AUG-G-ACCCGCGG-CGC--A------UU-A-G-CU-A-G---UUGGUA-AG-G-UAAU-GG-CUUACCAA-GGCG-ACG-AUGCGUAGCCGACCU-G-AG-------------A-GGGU-GAUC-GGCCACAUUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCA--------------------CAAU-GGGG-GAAA-CCCUGAUGCAGCAACGCCGCG-UGA-GU-GA-UGAC-GGUC--UU-CG-GA-UUGUAAA------------------------GCUCUGUC-UU-UGGG-GAC-G------A--------------------------U-AA------------------------U-GA-CGGU-A-C-CC--A-AGG---------AG-GAAGC-CAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GUGGCA-A-GCG-UUGUC-CGGAUUUACUGGGCGUAAAGGGAGCG-UAG-G-CG-AUU-UUUAAG-UGGG-AUGUG-AAA-UA-CCCGGG-CUC-AA-CCUGGG-UGC-U-------------------------------------------GC-A-U----------------------------------------------UCCA-AAC-UGGGA-AUC-U-A-G-AG-UG-----CAGGAG-GGGAG-AGU-GGAAUU-CCU--------------------AGU-GUA-GCG-GUGAAA-UG-C-GUAGAG-AUUAGGAAG-AAC-A-CCAG--U-G-GCGAAGGCGA--CUCUCUG------GACUG--------------------------------------------------------------UAA-CU--GACG-----CUGA-GG--CAUGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AAUA-CUAGGUG-UAGGAGG-----UAUCGA-CU---------------------------------CCUUCUG-UGCC-GCA-GUUAACACAA-UAA-GUAU-UCCGCCUG-GGAAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGA-CCC--GC-A--CA-A-GCA-GCGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCUAGAC-UUGACA-UC--------------UCCUG------N-AU-U-A-GUCCGUANU-G-GA-U-GAAG--UC-----CC-----------------------------------------UUCG----------------------------------------------------------------GG----GA---CA-GGA---GA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUA-UC--AUUAG---U-U-GC-U-AA-CA--U--------------------------------UUAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGAG-CACU-C-U-AGU-GAGAC-U-GCCC-GG-G-U-UAA-CCG-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--UC-U-A-GGGCUACACACGUGCUACAAUGG-UAGG-A--C-AAA-AAGA-U-GC-U-A-U-ACCG-CA-AGGU-G-----------GA-G-CUAA-ACU-CA---AAACCCU-AUC-CCAGUUCGGA-UUGUAGGC-U-GAAACUC-GCCUACA-UGAAGCCGGAGU-UGCUAGUA-AUCGC-GAA-UC-AG-AAU-GUCGCGGUG-AAU-ACGUU-CCCGGGUCUUGUA----CACACCGCCCGUC-ACA--CCAUGAGA-GUCGGCAACACCC-GAAG-CCCG-UGA-G-GU-AA-CC----------------------------------UUU-U--------------------------------------GGAAC-C-AGCGGU-CGAAGGUGGGGUUGA-UG-AUU-GGGGUG-AAGUCGUAACAAGGUAACCGUAUCGGAAGGUG-CGGN-UGGAUCACCUCC-------------------------------------------------------------------------------------------
+>VibCho12 Vibrio cholerae
+----------------------------------------AGAGUUU-GAU-NNUGGCUCAGAUUGAAC-GC-UGGC-GGC-A-GG--C-CUAACACAU-GCAAGU-CGA-GCG--GCAG-CAC---------------------------------------------AGAGGAA----------------------------------CUUG----------------------------------UUCCUUG----------------------------------------------G-GUG--GC--GAG-CGG-C-GG--A-CGGGUGAGU---AAU-GCCUGGG-A-A--AUU-GC-CCGGUAGA-GG--GGGAU-AA-CCAUU-G-GAAA-CGA-UGG-CUAAUACC-G-CAU-AA---C----------------CUC---------------------------------------------------------------------------------------------G-CAA------------------------------------------------------------------------------------GAG-----------------CAAA--GC-A-GG-G-GA-C-C---------UUCG-----------GG---CCUU-GC-G--C----------UA----------CCGG---AUA-U-GCCCAGGU-GGG--A------UU-A-G-CU-A-G---UUGGUG-AG-G-UAAG-GG-CUCACCAA-GGCG-ACG-AUCCCUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACACUGGAA-CUGA-GA-CACG-GUCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCA--------------------CAAU-GGGC-GCAA-GCCUGAUGCAGCCAUGCCGCG-UGU-AU-GA-AGAA-GGCC--UU-CG-GG-UUGUAAA------------------------GUACUUUC-AG-UAGG-GAG-G------AA-GGUG-GUUAAG-------U-----U-AA-UA----C---CU-UAAU-CAU-UU-GA-CGUU-A-C-CU--A-CAG---------AA-GAAGC-ACC-GGCUAAC-UCCGU---GCCAGCAGCCG-CGGUAAU-AC-GGAG-GGUGCA-A-GCG-UUAAU-CGGAAUUACUGGGCGUAAAGCGCAUG-CAG-G-UGGUUU-GUUAAG-UCAG-AUGUG-AAA-GC-CCUGGG-CUC-AA-CCUAGG-AAU-C-------------------------------------------GC-A-U----------------------------------------------UUGA-AAC-UGACA-AGC-U-A-G-AG-UA-----CUGUAG-AGGGG-GGU-AGAAUU-UCA--------------------GGU-GUA-GCG-GUGAAA-UG-C-GUAGAG-AUCUGAAGG-AAU-A-CCGG--U-G-GCGAAGGCGG--CCCCCUG------GACAG--------------------------------------------------------------AUA-CU--GACA-----CUCA-GA--UGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-UCUA-CUUGGAG-GUUGUGCC-----CUAGA----------------------------------G-GCGUGGC-UUUC-GGA-GCUAACGCGU-UAA-GUAG-ACCGCCUG-GGGAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-UGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AUGCAACG-CGAAG-AA-CCUUA-CCUACUC-UUGACA-UC--------------CAGAG------A-AU-C-U-AGCG-GAGA-C-GC-U-GGAG--UG-----CC-----------------------------------------UUCG----------------------------------------------------------------GG----AG---CU-CUG-A-GA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUU-GUGA-AAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUA-UC--CUUGU---U-U-GC-C-AG-CA--C-------------------------------GUAAUG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUGGG-AACU-C-C-AGG-GAGAC-U-GCCG-GU-G-A-UAA-ACC-G--GAGG-A-AGG-U-GGGG-ACGACGUC--AAGUCAUCAU-G-GC-CCUUACG--AG-U-A-GGGCUACACACGUGCUACAAUGG-CGUAUA--C-AGA-GGGC-A-GC-GAA-U-ACCG-CGAAGGU-G-----------GA-G-CGAA-UCU-CA-C-AAAGUAC-GUC-GUAGUCCGGA-UUGGAGUC-U-GCAACUC-GACUCCA-UGAAGUCGGAAU-CGCUAGUA-AUCGC-AAA-UC-AG-AAU-GUUGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUGGGCUGCAAAA-GAAG-CAGG-UAG-U-UU-AA-CC----------------------------------UUC-G--------------------------------------GGAGG-A-CGCUUG-CCACUUUGUGGUUCA-UG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCGCUAGGGGAACCUG-GCGC-UGGAUCACCUCCUUU----------------------------------------------------------------------------------------
+>CloPerfr Clostridium perfringens
+------------------------------UUUUAAAUUGAGAGUUU-GAU-CCUGGCUCAGGAUGAAC-GC-UGGC-GGC-G-UG--C-UUAACACAU-GCAAGU-CGA-GCGA-UG---AAG----------------------------------------------U-UUCC----------------------------------UUCG----------------------------------GGAAA--------------------------------------------------CGG--AU--UAG-CGG-CGGG--A-CGGGUGAGU---AAC-ACGUGGG-UAA--CCU-GC-CUCAUAGA-GU--GGAAU-AG-CCUUC-C-GAAA-GGA-AGA-UUAAUACC-U-CAU-AA---U-G-UUG-A--A-AG--AUG---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------CAU--C-A--U--UC-AAC-CAAA--GG-A---------------------GCAA-------------------U-CC-G--C----------UA----------UGAG---AUG-G-ACCCGCGG-CGC--A------UU-A-G-CU-A-G---UUGGUG-GG-G-UAAC-GG-CCUACCAA-GGCG-ACG-AUGCGUAGCCGACCU-G-AG-------------A-GGGU-GAUC-GGCCACAUUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCA--------------------CAAU-GGGG-GAAA-CCCUGAUGCAGCAACGCCGCG-UGA-GU-GA-UGAA-GGUU--UU-CG-GA-UCGUAAA------------------------GCUCUGUC-UU-UGGG-GAA-G------A--------------------------U-AA------------------------U-GA-CGGU-A-C-CC--A-AGG---------AG-GAAGC-CAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GUGGCG-A-GCG-UUAUC-CGGAUUUACUGGGCGUAAAGGGAGCG-UAG-G-CGGAUG-AUUAAG-UGGG-AUGUG-AAA-UA-CCCGGG-CUC-AA-CUUGGG-UGC-U-------------------------------------------GC-A-U----------------------------------------------UCCA-AAC-UGGUU-AUC-U-A-G-AG-UG-----CAGGAG-AGGAG-AGU-GGAAUU-CCU--------------------AGU-GUA-GCG-GUGAAA-UG-C-GUAGAG-AUUAGGAAG-AAC-A-CCAG--U-G-GCGAAGGCGA--CUCUCUG------GACUG--------------------------------------------------------------UAA-CU--GACG-----CUGA-GG--CUCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AAUA-CUAGGUG-UGGGGGU------UUCAA-C----------------------------------ACCUCCG-UGCC-GCC-GCUAACGCAU-UAA-GUAU-UCCGCCUG-GGGAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGA-CCC--GC-A--CA-A-GUA-GCGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCUACAC-UUGACA-UC--------------CCUUG------C-AU-U-A-CUCU-UAAU-C-GA-G-GAAA--U------CC-----------------------------------------UUCG----------------------------------------------------------------GG----GA---CA-AGG-U-GA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-UC--GUUAG---U-U-AC-U-AC-CA--U--------------------------------UAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGAG-GACU-C-U-AGC-GAGAC-U-GCCU-GG-G-U-UAA-CCA-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--UG-U-A-GGGCUACACACGUGCUACAAUGG-CUGGUA--C-AGA-GAGA-U-GC-A-A-U-ACCG-CG-AGGU-G-----------GA-G-CCAA-ACU-UA---AAAACCA-GUC-UCAGUUCGGA-UUGUAGGC-U-GAAACUC-GCCUACA-UGAAGCUGGAGU-UACUAGUA-AUCGC-GAA-UC-AG-AAU-GUCGCGGUG-AAU-ACGUU-CCCGGGUCUUGUA----CACACCGCCCGUC-ACA--CCAUGAGA-GUUGGCAAUACCC-GAAG-UCCG-UGA-G-CU-AA-CC----------------------------------GCA-A--------------------------------------GGAGG-C-AGCGGC-CGAAG-UAGGGUCAG-CG-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGAGAACCUG-CGGC-UGGAUCACCUCCUUUCU--------------------------------------------------------------------------------------
+>AcbXylin Acetobacter xylinum
+-----------------------------------------GAGUUU-CAU-CCUGGCUCAGAGCGAAC-GC-UGGC-GGC-A-UG--C-UUAACACAU-GCAAGU-CGC-ACGA-AC--------------------------------------------------------CU----------------------------------UUCG----------------------------------GG----------------------------------------------------------GU--UAG-UGG-C-GG--A-CGGGUGAGU---AAC-GCGUAGG-G-A--UCU-GU-CCAUGGGU-GG--GGGAU-AA-CUUUG-G-GAAA-CUG-AAG-CUAAUACC-G-CAU-GA---C----------------ACC---------------------------------------------------------------------------------------------U-GAG------------------------------------------------------------------------------------GGU-----------------CAAA--GG-C---------------------GCAA-------------------G-UC-G--C----------CU----------GUGG---AGG-A-ACCUGCGU-UCG--A------UU-A-G-CU-A-G---UUGGUG-GG-G-UAAA-GG-CCUACCAA-GGCG-AUG-AUCGAUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACACUGGGA-CUGA-GG-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGGC-GCAA-GCCUGAUCCAGCAAUGCCGCG-UGU-GU-GA-AGAA-GGUU--UU-CG-GA-UUGUAAA------------------------GCACUUUC-AG-CGGG-GAC-G------A--------------------------U-GA------------------------U-GA-CGGU-A-C-CC--G-CAG---------AA-GAAGC-CCC-GGCUAAC-UUCGU---GCCAGCAGCCG-CGGUAAU-AC-GAAG-GGGGCA-A-GCG-UUGCU-CGGAAUGACUGGGCGUAAAGGGCGCG-UAG-G-CGGUUG-ACACAG-UCAG-AUGUG-AAA-UU-CCUGGG-CUU-AA-CCUGGA-GGC-U-------------------------------------------GC-A-U----------------------------------------------UUGA-UAC-AUGGC-GAC-U-A-G-AG-UG-----UGAGAG-AGGGU-UGU-GGAAUU-CCC--------------------AGU-GUA-GAG-GUGAAA-UU-C-GUAGAU-AUUGGGAAG-AAC-A-CCGG--U-G-GCGAAGGCGG--CAACCUG------GCUCA--------------------------------------------------------------UGA-CU--GACG-----CUGA-GG--CGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCUGUAAACGAUG-UGUG-CUGGAUG-UUGGGUGA--C---UUU----------------------------------GU-CAUUCAG-UGUC-GUA-GUUAACGCGA-UAA-GCAC-ACCGCCUG-GGGAGUACGGCC-GCAA-GGUU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGCAG-AA-CCUUA-CCAGGGC-UUGACA-UG------------C-GGAGG------C-CG-U-G-UCCA-GAGA-U-GG-G-CAUU--UC-----UC-----------------------------------------GCAA----------------------------------------------------------------GA----GA---CC-UCCAG-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUCG-CC--UUUAG---U-U-GC-C-AG-CA--C-------------------------------GUCUGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUGGG-CACU-C-U-AAA-GGAAC-U-GCCG-GU-G-A-CAA-GCC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUAUG--UC-C-U-GGGCUACACACGUGCUACAAUGG-CGGUGA--C-AGU-GGGA-A-GC-C-A-G-GUAG-CG-AUAC-C-----------GA-G-CCGA-UCU-CA---AAAAGCC-GUC-UCAGUUCGGA-UUGCACUC-U-GCAACUC-GAGUGCA-UGAAGGUGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUUGGUUUGACCU-UAAG-CCGG-UGA-G-CG-AA-CC----------------------------------GCA-A--------------------------------------GGACG-C-AGCCGA-CCACGGUCGGGUCAG-CG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCCUUU----------------------------------------------------------------------------------------
+>VibVuln2 Vibrio vulnificus
+----------------------------------------AGAGUUU-GAU-NNUGGCUCAGAUUGAAC-GC-UGGC-GGC-A-GG--C-CUAACACAU-GCAAGU-CGA-GCG--GCAG-CAC---------------------------------------------AGAGAAA----------------------------------CUUG----------------------------------UUUCUCG----------------------------------------------G-GUG--GC--GAG-CGG-C-GG--A-CGGGUGAGU---AAU-GCCUGGG-A-A--AUU-GC-CCUGAUGU-GG--GGGAU-AA-CCAUU-G-GAAA-CGA-UGG-CUAAUACC-G-CAU-GA---U----------------AGC---------------------------------------------------------------------------------------------U-UCG------------------------------------------------------------------------------------GCU-----------------CAAA--GA-G-GG-G-GA-C-C---------UUCG-----------GG---CCUC-UC-G--C----------GU----------CAGG---AUA-U-GCCCAGGU-GGG--A------UU-A-G-CU-A-G---UUGGUG-AG-G-UAAG-GG-CUCACCAA-GGCG-ACG-AUCCCUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACACUGGAA-CUGA-GA-CACG-GUCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCA--------------------CAAU-GGGC-GCAA-GCCUGAUGCAGCCAUGCCGCG-UGU-GU-GA-AGAA-GGCC--UU-CG-GG-UUGUAAA------------------------GCACUUUC-AG-UCGU-GAG-G------AA-GGUG-GUAGUG-------U-----U-AA-UA----G---CA-CUAU-CAU-UU-GA-CGUU-A-G-CG--A-CAG---------AA-GAAGC-ACC-GGCUAAC-UCCGU---GCCAGCAGCCG-CGGUAAU-AC-GGAG-GGUGCG-A-GCG-UUAAU-CGGAAUUACUGGGCGUAAAGCGCAUG-CAG-G-UGGUUU-GUUAAG-UCAG-AUGUG-AAA-GC-CCGGGG-CUC-AA-CCUCGG-AAC-U-------------------------------------------GC-A-U----------------------------------------------UUGA-AAC-UGGCA-GAC-U-A-G-AG-UA-----CUGUAG-AGGGG-GGU-AGAAUU-UCA--------------------GGU-GUA-GCG-GUGAAA-UG-C-GUAGAG-AUCUGAAGG-AAU-A-CCGG--U-G-GCGAAGGCGG--CCCCCUG------GACAG--------------------------------------------------------------AUA-CU--GACA-----CUCA-GA--UGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCUGUAAACGAUG-UCUA-CUUGGAG-GUUGUGGC-----CUUGA----------------------------------G-CCGUGGC-UUUC-GGA-GCUAACGCGU-UAA-GUAG-ACCGCCUG-GGGAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-UGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AUGCAACG-CGAAG-AA-CCUUA-CCUACUC-UUGACA-UC--------------CAGAG------A-AU-C-U-AGCG-GAGA-C-GC-U-GGAG--UG-----CC-----------------------------------------UUCG----------------------------------------------------------------GG----AA---CU-CUG-A-GA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUU-GUGA-AAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUA-UC--CUUGU---U-U-GC-C-AG-CG--A-------------------------------GUAAUG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCGGG-AACU-C-C-AGG-GAGAC-U-GCCG-GU-G-A-UAA-ACC-G--GAGG-A-AGG-U-GGGG-ACGACGUC--AAGUCAUCAU-G-GC-CCUUACG--AG-U-A-GGGCUACACACGUGCUACAAUGG-CGCAUA--C-AGA-GGGC-G-GC-C-A-A-CUUG-CG-AAAG-U-----------GA-G-CGAA-UCC-CA-A-AAAGUGC-GUC-GUAGUCCGGA-UUGGAGUC-U-GCAACUC-GACUCCA-UGAAGUCGGAAU-CGCUAGUA-AUCGU-GGA-UC-AG-AAU-GCCACGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUGGGCUGCAAAA-GAAG-UGGG-UAG-U-UU-AA-CC----------------------------------UUC-G--------------------------------------GGAGG-A-CGCUCA-CCACUUUGUGGUUCA-UG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCGCUAGGGGAACCUG-GCGC-UGGAUCACCUCCUUU----------------------------------------------------------------------------------------
+>DecToluo Desulfobacula toluolica
+----------------------------------------AGAGUUU-GAU-NNUGGCUCAGAAUGAAC-GC-UGGC-GGC-G-UG--C-UUAACACAU-GCAAGU-CGA-ACGA-GAA--AGG-----------------------------------------------GAUUG----------------------------------CUUG----------------------------------CAAUC--------------------------------------------------CUGAGUA--GAG-UGG-C-GC--A-CGGGUGAGU---AAC-ACGUAGA-UAA--UCU-AC-CUUCAAGC-CC--GGGAU-AA-CUGCC-C-GAAA-GGA-CAG-CUAAUACC-G-GAU-GA---A-G-UUG-A--U-U---CAC---------------------------------------------------------------------------------------------A-CAA------------------------------------------------------------------------------------GUG----A--A--UU-AAU-GAAA--GA-U-UG-C--C-UCUU--------CUUG--------A--AA---GCAA-UU-G--U----------UU----------GGAG---AUG-A-GUUUGCGG-ACC--A------UU-A-G-UU-U-G---UUGGUG-GG-G-UAAA-GG-CCUACCAA-GACU-GCG-AUGGUUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACACUGGAA-CUGG-UA-CACG-GUCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGAGG-AAUUUUGCG--------------------CAAU-GGGG-GAAA-CCCUGACGCAGCAACGCCGCG-UGA-GU-GA-AGAA-GGCC--CU-UG-GG-UCGUAAA------------------------GCUCUGUC-GA-CAGG-GAA-G--A---AA-UUAG-AGUUUU-------C-----U-AA-UA----G---GA-GAUU-CUA-UU-GA-CGGU-A-C-CU--G-UAG---------AG-GAAGC-ACC-GGCUAAC-UCCGU---GCCAGCAGCCG-CGGUAAU-AC-GGGG-GGUGCA-A-GCG-UUAUU-CGGAAUUAUUGGGCGUAAAGGGCGCG-UAG-G-CGGUCU-UGUCGG-UCAG-AUGUG-AAA-GC-CCAGGG-CUC-AA-CCCUGG-ACG-U-------------------------------------------GC-A-U----------------------------------------------UUGA-AAC-AGCAA-GAC-U-U-G-AG-UA-----CGGGAG-AGGAA-AGC-GGAAUU-CCU--------------------GGU-GUA-GAG-GUGAAA-UU-C-GUAGAU-AUCAGGAGG-AAC-A-CCGA--U-G-GCGAAGGCAG--CUUUCUG------GACCG--------------------------------------------------------------AUA-CU--GACG-----CUGA-GG--CGCGAAG-G-C-GUGGG-UAGC-GAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCAGUAAACGAUG-UACA-CUAGGUG-UGGCGGAU-----AUUAA-A--------------------------------A-UCUGCUG-UGCC-CAA-GCUAACGCAU-UAA-GUGU-ACCGCCUG-GGGAGUACGGUC-GCAA-GACU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-ACGCAACG-CGAAG-AA-CCUUA-CCUGGGU-UUGACA-UC--------------CUGUG------A-AU-A-G-CGAA-GAGA-U-UA-G-AUAG--UG-----CC-----------------------------------------UUCG----------------------------------------------------------------GG----AG---CA-CAG-A-GA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UUGG-UUAA-GU-CCAGCAAC-GAGCGCAACC-CUUA-UC--GUUAG---U-U-GC-C-AG-CA--C-------------------------------AUAAUG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUGGG-AACU-C-U-AGC-GAGAC-U-GCCC-GG-G-U-UAA-CCG-G--GAGG-A-AGG-C-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUAUG--UC-C-A-GGGCUACACACGUGCUACAAUGG-UAAAUA--C-AGA-GGGC-A-GC-A-A-G-CCGG-CA-ACGG-U-----------AA-G-CGAA-UCC-C--U-AAAGUUU-AUC-UCAGUCCGGA-UUGGAGUC-U-GCAACUC-GACUCCA-UGAAGUUGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-AUGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGAGA-GUUGAUUAUACCC-GACG-UCGU-UGG-G-CU-AA-CUA---------------------------------UUU-A-------------------------------------UAGAAG-C-CGGCGC-CUAAGGUAUGGUUGA-UA-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUUGAGGAAUCAG-CGGC-UGGAUCACCUCCUUNNN--------------------------------------------------------------------------------------
+>NeiGonor Neisseria gonorrhoeae
+--------------------------------UGAACAUAAGAGUUU-GAU-CCUGGCUCAGAUUGAAC-GC-UGGC-GGC-A-UG--C-UUUACACAU-GCAAGU-CGG-ACG--GCAG-CAC---------------------------------------------AGGGAAG----------------------------------CUUG----------------------------------CUUCUCG----------------------------------------------G-GUG--GC--GAG-UGG-C-GA--A-CGGGUGAGU---AAC-AUAUCGG-A-A--CGU-AC-CGGGUAGC-GG--GGGAU-AA-CUGAU-C-GAAA-GAU-CAG-CUAAUACC-G-CAU-AC---G----------------UCU---------------------------------------------------------------------------------------------U-GAG------------------------------------------------------------------------------------AGG-----------------GAAA--GC-A-GG-G-GA-C-C---------UUCG-----------GG---CCUU-GC-G--C----------UA----------UCCG---AGC-G-GCCGAUAU-CUG--A------UU-A-G-CU-G-G---UUGGCG-GG-G-UAAA-GG-CCCACCAA-GGCG-ACG-AUCAGUAGCGGGUCU-G-AG-------------A-GGAU-GAUC-CGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUUUUGGA--------------------CAAU-GGGC-GCAA-GCCUGAUCCAGCCAUGCCGCG-UGU-CU-GA-AGAA-GGCC--UU-CG-GG-UUGUAAA------------------------GGACUUUU-GU-CAGG-GAA-G------AA-AAGG-CUGUUG-------C-----C-AA-UA----U---CG-GCGG-CCG-AU-GA-CGGU-A-C-CU--G-AAG---------AA-UAAGC-ACC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GGUGCG-A-GCG-UUAAU-CGGAAUUACUGGGCGUAAAGCGGGCG-CAG-A-CGGUUA-CUUAAG-CAGG-AUGUG-AAA-UC-CCCGGG-CUC-AA-CCCGGG-AAC-U-------------------------------------------GC-G-U----------------------------------------------UCUG-AAC-UGGGU-GAC-U-C-G-AG-UG-----UGUCAG-AGGGA-GGU-GGAAUU-CCA--------------------CGU-GUA-GCA-GUGAAA-UG-C-GUAGAG-AUGUGGAGG-AAU-A-CCGA--U-G-GCGAAGGCAG--CCUCCUG------GGAUA--------------------------------------------------------------ACA-CU--GACG-----UUCA-UG--UCCGAAA-G-C-GUGGG-UAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCCUAAACGAUG-UCAA-UUAGCUG-UUGGGCAA-----CUUGA----------------------------------U-UGCUUGG-UAGC-GUA-GCUAACGCGU-GAA-AUUG-ACCGCCUG-GGGAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGA-CCC--GC-A--CA-A-GCG-GUGGAU-GA-UGUGGA-UUAAUUC-G-AUGCAACG-CGAAG-AA-CCUUA-CCUGGUU-UUGACA-UG--------------UGCGG------A-AU-C-C-UCCG-GAGA-C-GG-A-GGAG--UG-----CC-----------------------------------------UUCG----------------------------------------------------------------GG----AG---CC-GUA-A-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-UC--AUUAG---U-U-GC-C-AU-CA--U--------------------------------UCGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AAU-GAGAC-U-GCCG-GU-G-A-CAA-GCC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUAUG--AC-C-A-GGGCUUCACACGUCAUACAAUGG-UCGGUA--C-AGA-GGGU-A-GC-C-A-A-GCCG-CG-AGGC-G-----------GA-G-CCAA-UCU-CA-C-AAAACCG-AUC-GUAGUCCGGA-UUGCACUC-U-GCAACUC-GAGUGCA-UGAAGUCGGAAU-CGCUAGUA-AUCGC-AGG-UC-AG-CAU-ACUGCGGUG-AAU-ACGUU-CCCGGGUCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUGGGGGAUACCA-GAAG-UAGG-UAG-G-GU-AA-CC----------------------------------GCA-A--------------------------------------GGAGU-C-CGCUUA-CCACGGUAUGCUUCA-UG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCCUUUCU--------------------------------------------------------------------------------------
+>CloProte Clostridium proteolyticum
+---------------------------------------GAGAGUUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-UUAACACAU-GCAAGU-CGA-GCGA-UG---AAA-------------------------------------------------UCC----------------------------------UUCG----------------------------------GGA----------------------------------------------------UGG--AU--UAG-CGG-C-GG--A-CGGGUGAGU---AAC-ACGUGGG-UAA--CCU-GC-CUCAAAGU-GG--GGGAU-AG-CCUUC-C-GAAA-GGA-AGA-UUAAUACC-G-CAU-AA---U-A-UCU-A--A-UU--GCC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GGC--A-G--A--UA-GAU-UAAA--GG-A---------------------GCAA-------------------U-UC-G--C----------UU----------UGAG---AUG-G-ACCCGCGG-CGC--A------UU-A-G-CU-A-G---UUGGUG-AG-G-UAAC-GG-CUCACCAA-GGCG-ACG-AUGCGUAGCCGACCU-G-AG-------------A-GGGU-GAUC-GGCCACAUUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCG--------------------CAAU-GGAG-GAAA-CUCUGACGCAGCAACGCCGCG-UGA-GU-GA-UGAA-GGUC--UU-CG-GA-UUGUAAA------------------------GCUCUGUC-UU-CAGG-GAC-G------A--------------------------U-AA------------------------U-GA-CGGU-A-C-CU--G-AGG---------AG-GAAGC-CAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GUGGCA-A-GCG-UUGUC-CGGAUUUAUUGGGCGUAAAGCAUGCG-UAG-G-CGGAUA-CUUAAG-UGGG-AUGUG-AAA-AC-CCGGGG-CUC-AA-CUCCGG-ACC-U-------------------------------------------GC-A-U----------------------------------------------UCCA-AAC-UGGGU-GUC-U-A-G-AG-UA-----CAGGAG-AGGAA-AGG-GGAAUU-CCU--------------------AGU-GUA-GCG-GUGAAA-UG-C-GUAGAG-AUUAGGAAG-AAC-A-CCAG--U-G-GCGAAGGCGC--CUUUCUG------GACUG--------------------------------------------------------------UAA-CU--GACG-----CUGA-GG--CAUGAAA-G-C-GUGGG-UAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AGUA-CUAGGUG-UCGGGGU-----U-UCAA--U---------------------------------ACUUCGG-UGCC-GCA-GUUAACACAU-UAA-GUAC-UCCGCCUG-GGAAGUACGAUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GUA-GCGGAG-CA-UGUGGU-UUAAUUC-G-ACGCAACG-CGAAG-AA-CCUUA-CCUGGGC-UUGACA-UC--------------CUAAG------A-AG-U-C-GGUG-GAAA-C-AC-U-GAUG--UG-----CC-----------------------------------------UUCGG---------------------------------------------------------------GG----AA---CU-UAG-A-GA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-UU--GUUAG---U-U-GC-U-AC-CA--U--------------------------------UAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGAG-CACU-C-U-AGC-AAGAC-U-GCCU-GG-G---UAA-CCA-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--UC-C-A-GGGCUACACACGUGCUACAAUGG-UUGGUA--C-AGA-GAGA-C-GC-A-A-G-ACCG-UG-AGGU-G-----------GA-G-CAAA-UCC-CA-U-AAAACCA-AUC-UCAGUUCGGA-UUGUAGGC-U-GAAACUC-GCCUACA-UGAAGCUGGAGU-UACUAGUA-AUCGC-GAA-UC-AG-AAU-GUCGCGGUG-AAU-GCGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGAGA-GUCGAUAACACCC-GAAG-UCCG-UGA-G-GU-AA-CC----------------------------------GUA-A--------------------------------------GG-GC-C-AGCG---CGAAGGUGGGAUUGA-UG-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGAGAACCUG-CGGN-UGGAUCACCUCCUU-----------------------------------------------------------------------------------------
+>AcbHanse Acetobacter hansenii
+-----------------------------------------GAGUUU-GAU-UAUGGCUCAGAGCGAAC-GC-UGGC-GGC-A-UG--C-UUAACACAU-GCAAGU-CGC-ACGA-AC--------------------------------------------------------CU----------------------------------UUCG----------------------------------GG----------------------------------------------------------GU--UAG-UGG-C-GG--A-CGGGUGAGU---AAC-GCGUAGG-G-A--UCU-GU-CCAUGGGU-GG--GGGAU-AA-CUUUG-G-GAAA-CUG-AAG-CUAAUACC-G-ACU-GA---C----------------ACC---------------------------------------------------------------------------------------------U-GAG------------------------------------------------------------------------------------GGU-----------------CAAA--GG-C---------------------GCGA-------------------G-UC-G--C----------CU----------GUGG---AGG-A-ACCUGCGU-UCG--A------UU-A-G-CU-A-G---UUGGUG-GG-G-UAAA-GG-CCUACCAA-GGCG-AUG-AUCGAUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGGC-GCAA-GCCUGAUCCAGCAAUGCCGCG-UGU-GU-GA-AGAA-GGUU--UU-CG-GA-UUGUAAA------------------------GCACUUUC-AG-CGGG-GAC-G------A--------------------------U-GA------------------------U-GA-CGGU-A-C-CC--G-CAG---------AA-GAAGC-CCC-GGCUAAC-UUCGU---GCCAGCAGCCG-CGGUAAU-AC-GAAG-GGGGCA-A-GCG-UUGCU-CGGAAUGACUGGGCGUAAAGGGCGCG-UAG-G-CGGUUG-UUACAG-UCAG-AUGUG-AAA-UU-CCCGGG-CUU-AA-CCUGGG-GGC-U-------------------------------------------GC-A-U----------------------------------------------UUGA-UAC-GUGAC-GAC-U-A-G-AG-UG-----UGAGAG-AGGGU-UGU-GGAAUU-CCC--------------------AGU-GUA-GAG-GUGAAA-UU-C-GUAGAU-AUUGGGAAG-AAC-A-CCGG--U-G-GCGAAGGCGG--CAACCUG------GCUCA--------------------------------------------------------------UGA-CU--GACG-----CUGA-GG--CGCGAAA-G-C-GUGGG-GUGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCUGUAAACGAUG-UGUG-CUGGAUG-UUGGAUGG--C---UUG----------------------------------GC-CAUUCGG-UGUC-GUA-GUUAACGCGA-UAA-GCAC-ACCGCCUG-GGGAGUACGGCC-GCAA-GGUU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGCAG-AA-CCUUA-CCAGGAC-UUGACA-UG------------C-GGAGG------C-UG-U-G-UCCA-GAGA-U-GG-G-CAUU--UC-----UC-----------------------------------------GCAA----------------------------------------------------------------GA----GA---CC-UCCAG-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUCG-CC--UUUAG---U-U-GC-C-AG-CA--C-------------------------------GUCUGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUGGG-CACU-C-U-AAA-GGAAC-U-GCCG-GU-G-A-CAA-GCC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUAUG--UC-C-U-GGGCUACACACGUGCUACAAUGG-CGGUGA--C-AGU-GGGA-A-GC-C-A-G-GCAG-CG-AUGC-C-----------GA-G-CGGA-UCU-CC---AAAAGCC-GUC-UCAGUUCGGA-UUGCACUC-U-GCAACUC-GAGUGCA-UGAAGGUGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUUGGUUUGACCU-UAAG-CCGG-UGA-G-CG-AA-CC----------------------------------GCA-A--------------------------------------GGACG-C-AGCCGA-CCACGGUCGGGUCAG-CG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCCUUU----------------------------------------------------------------------------------------
+>AnpMargi Anaplasma marginale
+----------------------------------------AGAGUUU-GAU-CCUGGCUCAGAACGAAC-GC-UGGC-GGC-A-AG--C-UUAACACAU-GCAAGU-CGA-ACGG-AC---CGU-------------A-------------------------------UACGCAG----------------------------------CUUG----------------------------------CUGCGUGU-----------------------------------------------AUG--GU--UAG-UGG-C-AG--A-CGGGUGAGU---AAU-GCAUAGG-A-A--UCU-AC-CUAGUAGU-AU--GGGAU-AG-CCACU-A-GAAA-UGG-UGG-GUAAUACU-G-UAU-AA---U----------------CCU---------------------------------------------------------------------------------------------G-CG-------------------------------------------------------------------------------------GGG-----------------GAAA--GA-----------------------UUUA---------------------UC-G--C----------UA----------UUAG---AUG-A-GCCUAUGU-CAG--A------UU-A-G-CU-A-G---UUGGUG-GG-G-UAAU-GG-CCUACCAA-GGCG-GUG-AUCUGUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACACUGGAA-CUGA-GA-CACG-GUCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGGC-GCAA-GCCUGAUCCAGCUAUGCCGCG-UGA-GU-GA-GGAA-GGCC--UU-AG-GG-UUGUAAA------------------------ACUCUUUC-AG-UAGG-GAA-G------A--------------------------U-AA------------------------U-GA-CGGU-A-C-CU--A-CAG---------AA-GAAGU-CCC-GGCAAAC-UCCGU---GCCAGCAGCCG-CGGUAAU-AC-GGAG-GGGGCA-A-GCG-UUGUU-CGGAAUUAUUGGGCGUAAAGGGCAUG-UAG-G-CGGUUU-GGUAAG-UUAA-AGGUG-AAA-UA-CCAGGG-CUU-AA-CCCUGG-GGC-U-------------------------------------------GC-U-U----------------------------------------------UUAA-UAC-UGCAG-GAC-U-A-G-AG-UC-----CGGAAG-AGGAU-AGC-GGAAUU-CCU--------------------AGU-GUA-GAG-GUGAAA-UU-C-GUAGAU-AUUAGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGG--CUGUCUG------GUCCG--------------------------------------------------------------GUA-CU--GACG-----CUGA-GG--UGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCUGUAAACGAUG-AGUG-CUGAAUG-UGGGGGC-------UUUU------------------------------------GCCUCUG-UGUU-GUA-GCUAACGCGU-UAA-GCAC-UCCGCCUG-GGGACUACGGUC-GCAA-GACU-AAA-ACUC-AAA-GGAAUUG-ACGGGGA-CNC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AUGCAACG-CGAAA-AA-CCUUA-CCACUUC-UUGACA-UG-------------GAGGCU----A-G-AU-C-C-UUCU-UAAC-A-GA-A-GGGC--GC-----AG-----------------------------------------UUCGG---------------------------------------------------------------CU----G----GG-CCUCG-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUCA-UC--CUUAG---U-U-AC-C-AG-CG--G-------------------------------GUAAUG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGGG-CACU-U-U-AAG-GAAAC-U-GCCA-GU-G-A-UAA-ACU-G--GAGG-A-AGG-U-GGGG-AUGAUGUC--AAGUCAGCAC-G-GC-CCUUAUG--GG-G-U-GGGCUACACACGUGCUACAAUGG-CGACUA--C-AAU-AGGU-U-GC-A-A-C-GUCG-CA-AGGC-U-----------GA-G-CUAA-UCC-GU---AAAAGUC-GUC-UCAGUUCGGA-UUGUCCUC-U-GUAACUC-GAGGGCA-UGAAGUCGGAAU-CGCUAGUA-AUCGU-GGA-UC-AG-CAU-GCCACGGUG-AAU-ACGUU-CUCGGGUCUUGUA----CACACUGCCCGUC-ACG--CCAUGGGA-AUUGGCUUAACUC-GAAG-CUGG-UGC-G-CC-AA-CC----------------------------------GUA-A--------------------------------------GGAGG-C-AGCCAU-UUAAGGUUGGGUCGG-UG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCUGUAGGUGAACCUG-CGGC-UGGAUCACCUCCUU-----------------------------------------------------------------------------------------
+>CloTher8 Clostridium thermocopriae
+-------------------------------------------GUUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-CUAACACAU-GCAAGU-CGA-GCGG-UC---CGG-------------C-------------------------------ACUCAAC----------------------------------GUA-----------------------------------GUUGGGUG-----------------------------------------------GCG--GA--UAG-CGG-C-GG--A-CGGGUGAGU---AAC-GCGUGGG-CAA--CCU-AC-CCUUAAGA-CC--GGGAU-AG-CACCU-C-GAAA-GGG-GUG-CUAAUACU-G-GAU-AA---G-C-UCC-U--U-AU--AGG---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------CCU--A-U--A--GG-GAG-GAAA--GG-G-AGGC----------------GCAA----------------GCUA-CC-G--C----------UU----------AAGG---AUG-G-GCCCGCGU-CCC--A------UC-A-G-CU-A-G---UUGGUA-GG-G-UAAC-GG-CCUACCAA-GGCG-ACG-ACGGGUAGCCGGCCU-G-AG-------------A-GGGU-GGAC-GGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUCUUGGG--------------------CAAU-GGGC-GGAA-GCCUGACCCAGCGACGCCGCG-UGG-GG-GA-GGAA-GGCC--UU-CG-GG-UUGUAAA------------------------CCCCGUUA-GU-GUGG-GAA-G--A---A--------------------------G-GG-A----------------------U-GA-CGGU-A-C-CA--C-A-----------CG-AAAGC-CCC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAGU-AC-GUAG-GGGGCG-A-GCG-UUGUC-CGGAAUUACUGGGCGUAAAGGGCGCG-UAG-G-CGGUCA-AUCAAG-UCAG-GUGUA-AAA-GA-CCCGGG-CUC-AA-CCCGGG-GGU-A-------------------------------------------GC-A-U----------------------------------------------CUGA-AAC-UGGUU-GGC-U-A-G-AG-GG-----CAGGAG-AGGGG-AGU-GGAAUU-CCC--------------------GGU-GUA-GCG-GUGAAA-UG-C-GUAGAU-AUCGGGAGG-AAU-A-CCAG--U-G-GCGAAGGCGA--CUCUCUG------GACUG--------------------------------------------------------------GCC-CU--GACG-----CUGA-GG--CGCGAAA-G-C-GUGGG-GAGC-GAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCUGUAAACGAUG-GGUA-CUAGGUG-UGGGGCGC------GGAA----------------------------------G-CGUUCCG-UGCC-GUA-GCGAACGCAA-UAA-GUAC-CCCGCCUG-GGGAGUACGGCC-GCAA-GGUU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCAGGGC-UUGACA-UG------------C-AGGUA-----GU-AG-C-G-AGCC-GAAA-G-GG-G-AGCG-ACCUUA---CC----------------------------------------GGGA---------------------------------------------------------------GG--UAAGG---AG-CCU-G-CA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-CC--UCUAG---U-U-GC-C-AG-CA--C-------------------------------CUUCGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUGGG-CACU-C-U-AGA-GGGAC-U-GCCG-GC-A-A-AAA-GUC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CUAUAUG--CC-C-U-GGGCUACACACGUGCUACAAUGG-CCGGUA--C-AGA-GGGA-A-GC-G-A-A-GCCG-UG-AGGC-G-----------GA-G-CGAA-UCC-CA-A-AAAGCCG-GUC-CAAGUUCGGA-UUGCAGGC-U-GCAACUC-GCCUGCA-UGAAGUCGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCACGAGA-GCCUGCAACACCC-GAAG-CCGU--GA-C-CC-AA-CC----------------------------------GGGGA--------------------------------------GGAGG-G-AGCCGU-CGAAGGUGGGGCAGA-UG-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAUCGGAAGGUG-CGGC-UGGAUCACCUC--------------------------------------------------------------------------------------------
+>BaiGlob2 Bacillus globisporus
+----------------------------------------AGAGUUU-GAU-NNUGGCUCAGGACGAAC-GC-UGGC-GGC-A-UG--C-CUAAUACAU-GCAAGU-CGA-GCGG-AA---UGA----------------------------------------------UGAGAG----------------------------------CUUG----------------------------------CUCUCU-------------------------------------------------GAU--UU--UAG-CGG-C-GG--A-CGGGUGAGU---AAC-ACGUGGG-CAA--CCU-GC-CCUACAGA-UG--GGGAU-AA-CUCCG-G-GAAA-CCG-GGG-CUAAUACC-G-AAU-AA-----U-CAG-U--U-UG--UCC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GGA--C-A--A--AC-UCU-GAAA--GA-C-GG-U----------------UUCG----------------GCUG-UC-A--C----------UG----------UAGG---AUG-G-GCCCGCGG-CGC--A------UU-A-G-CU-A-G---UUGGUG-GG-G-UAAU-GG-CCUACCAA-GGCG-ACG-AUGCGUAGCCGACCU-G-AG-------------A-GGGU-GAUC-GGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UAGGG-AAUCUUCCA--------------------CAAU-GGAC-GAAA-GUCUGAUGGAGCAAUGCCGCG-UGA-GC-GA-AGAA-GGUU--UU-CG-GA-UCGUAAA------------------------GCUCUGUU-GU-AAGG-GAA-G--A---AC-ACGU-ACGGGA-------G-----U-AA-C-----U---GC-CCGU-GCC-AU-GA-CGGU-A-C-CU--U-AUU---------AG-AAAGC-CAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GUGGCA-A-GCG-UUGUC-CGGAAUUAUUGGGCGUAAAGCGCGCG-CAG-G-CGGUUC-UUUAAG-UCUG-AUGUG-AAA-GC-CCACGG-CUC-AA-CCGUGG-AGG---------------------------------------------GUCA-U----------------------------------------------UGGA-AAC-UGGAG-AAC-U-U-G-AG-UA-----CAGAAG-AGGAA-AGC-GGAAUU-CCA--------------------CGU-GUA-GCG-GUGAAA-UG-C-GUAGAG-AUGUGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGG--CUUUCUG------GUCUG--------------------------------------------------------------UAA-CU--GACG-----CUGA-GG--CGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AGUG-CUAAGUG-UUAGGGGG--U---UUCC---------------------------------GC-CCCUUAG-UGCU-GCA-GCUAACGCAU-UAA-GCAC-UCCGCCUG-GGGAGUACGGCC-GCAA-GGCU-GAA-ACUC-AAA-GGAAUUG-ACGGGGA-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCAGGUC-UUGACA-UC-------------CCACUG------A-CC-G-G-UGUA-GAGA-U-AC-A-UCUU--UC-----CC-----------------------------------------UUCG----------------------------------------------------------------GG----GA---CA-GUGGU-GA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-AU--CUUAG---U-U-GC-C-AG-CA--U--------------------------------UUAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AAG-GUGAC-U-GCCG-GU-G-A-UAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--AC-C-U-GGGCUACACACGUGCUACAAUGG-AUGAUA--C-AGA-GGGU-U-GC-C-A-A-CCCG-CG-AGGG-G-----------GA-G-CCAA-UCC-CA-U-AAAAUCA-UUC-CCAGUUCGGA-UUGGAGGC-U-GCAAGUC-GCCUCCA-UGAAGCCGGAAU-CGCUAGUA-AUCGU-GGA-UC-AG-CAU-GCCACGGUG-AAU-ACGUU-CCCGGGUCUUGUA----CACACCGCCCGUC-ACA--CCACGAGA-GUUUGUAACACCC-GAAG-UCGG-UGG-G-GU-AA-CCC---------------------------------UUA-C-------------------------------------GGGAGC-C-AGCCGC-CGAAGGUGGGACAGA-UG-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAUCGGAAGGUG-CGGC-UGGAUCACCUCCUUUNN--------------------------------------------------------------------------------------
+>MetForm2 Methanobacterium formicicum
+--------------------------------------AGUCCGUUU-GAU-CCUGGCGGAGGCC-ACU-GC-UAUU-GGG-UUUC--GAUUAAGCCAU-GCAAGU-CGA-ACGA-UC---------------------------------------------------------C----------------------------------UUCG----------------------------------G-----------------------------------------------------------GG--UCG-UGG-C-GU--A-CGGCUCAGU---AAC-ACGUGGA-UAA--CCU-AA-CCUUAGGA-CU--GGGAU-AA-CCCUG-G-GAAA-CUG-GGG-AUAAUACC-G-GAU-A------U-GUA-G--G-GC--UGC-------------------------------------------------------------------------------------------CUG-GAAU-----------------------------------------------------------------------------------GGU--U-C--C--CU-AUU-GAAA-UGU-----------------------UCCG---------------------AC-G--C----------CU----------AAGG---AUG-G-AUCUGCGG-CAG--A------UU-A-G-GU-A-G---UUGGCG-GG-G-UAAA-UG-CCCACCAA-GCCA-GUA-AUCUGUACGGGUUGU-G-AG-------------A-GCAA-GAGC-CCGGAGAUGGAAC-CUGA-GA-CAAG-GUUCCAG-GCC-C-UACG--GGGC-GC-A-GC-A-G-GCGCG-AAACCUCCG--------------------CAAU-GCAC-GAAA-GUGCGACGGGGGAAACCCAAG-UGC-CA-C-----U-CU----UA-AC----GGG--G-------------------------UGGCUUUU-CU-UAAG-U-------------------------------G-----U-AA-AA----A--------------------------G-C-UU--U-UGG---------AA-UAAGA-GCUGGGCAAGA-CCGGU---GCCAGCCGCCG-CGGUAAC-AC-CGG-CAGCUCA-A-GUG-GUGGC-CGUUUUUAUUGGGCCUAAAGCGUUCG-UAG-C-CGGCUU-GAUAAG-UCUC-UGGUG-AAA-UC-UCACGG-CUU-AA-CCGUGA-GAAUU-------------------------------------------GC-U-G----------------------------------------------GAGA-UAC-UAUUA-GGC-U-U-G-AG-GC-----CGGGAG-AGGUU-AGC-GGUACU-CCC--------------------GGG-GUA-GGG-GUGAAA-UC-C-UAUAAU-CCCGGGAGG-ACC-A-CCUG--U-G-GCGAAGGCGG--CUAACUG------GAACG--------------------------------------------------------------GGC-CU--GACGG-----UGA-GU--AACGAAA-G-C-CAGGG-GCGC-GAACCGG-AUUAGAUAC-----CCGGGUAG-UCCUG-GCCGUAAACGAUG-UGGA-CUUGGUG-UUGGGAUG--GC-UCCGA--------------------------------GCU-GCCCCAG-UGCC-GAA-GGGAAGCUGU-UAA-GUCC-ACCGCCUG-GGAAGUACGGUC-GCAA-GACU-GAA-ACUU-AAA-GGAAUUG-GCGGGGG-AGC--ACCA--CA-A-CGC-GUGGAG-CC-UGCGGU-UUAAUUG-G-AUUCAACG-CCGGA-CA-UCUCA-CCAGGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACAGC-AGAAUGAUAGCCAGGUUGAUGACCUUGCU-UGA-CAAGCUGAGAGGA-GGUGCAUGGCCGCCGUCA-GCUCGUACC-GUGA-GGCGU-CCUG-UUAA-GU-CAGGCAAC-GAGCGAGACC-CACG-CC--CUUAG---U-U-AC-C-AG-CG--G--AUCC--------------------------UUCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGA---UGCCGGG-CACA-C-U-AAG-GGGAC-C-GCCA-GU-G-A-UAA-ACU-G--GAGG-A-AGG-A-GUGG-ACGACGGU--AGGUCCGUAU-G-CC-CCGAAUC--CC-C-U-GGGCUACACGCGGGCUACAAUGG-UUAGGA--C-AAU-GGGU-U-CC-G-A-C-ACUG-AA-AGGU-G-----------GA-G-GUAA-UCU-CC-U-AAACCUG-GCC-UUAGUUCGGA-UUGAGGGC-U-GUAACUC-GCCCUCA-UGAAGCUGGAAU-GCGUAGUA-AUCGC-GUG-UC-AUA-AC-CGCGCGGUG-AAU-ACGUC-CCUGCUCCUUGCA----CACACCGCCCGUC-ACG--CCACCCAA-AAAGGGUUUGGAU-GA-G-GCCA-U-A-G-UC----------------------------------------UUU-------------------------------------------GG-U-UAUGGU-CGAAUCUAGGUUCUU-UG-AGG-AGGGCG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCCU------------------------------------------------------------------------------------------
+>StaHomi2 Staphylococcus hominis
+----------------------------------------AGAGUUU-GAU---UGGCUCAGGAUGAAC-GC-UGGC-GGC-G-UG--C-CUAAUACAU-GCAAGU-CGA-GCGA-AC---AGA---------------------------------------------CGAGGAG----------------------------------CUUG----------------------------------CUCCUUU------------------------------------------------GAC--GU--UAG-CGG-C-GG--A-CGGGUGAGU---AAC-ACGUGGG-UAA--CCU-AC-CUAUAAGA-CU--GGGAU-AA-CUUCG-G-GAAA-CCG-GAG-CUAAUACC-G-GAU-AA---U-A-UUU-C--G-A---ACC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GGU----U--C--GA-UAGUGAAA--GA-U-GG-C----------------UUU-----------------GCUA-UC-A--C----------UU----------AUAG---AUG-G-ACCUGCGC-CGU--A------UU-A-G-CU-A-G---UUGGUA-AG-G-UAAC-GG-CUUACCAA-GGCA-ACG-AUACGUAGCCGACCU-G-AG-------------A-GGGU-GAUC-GGCCACACUGGAA-CUGA-GA-CACG-GUCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UAGGG-AAUCUUCCG--------------------CAAU-GGGC-GAAA-GCCUGACGGAGCAACGCCGCG-UGA-GU-GA-UGAA-GGUC--UU-CG-GA-UCGUAAA------------------------ACUCUGUU-AU-UAGG-GAA-G--A---AC-AAAC-GUGUAA-------G-----U-AA-C-----U---GU-GCAC-GUC-UU-GA-CGGU-A-C-CU--A-AUC---------AG-AAAGC-CAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GUGGCA-A-GCG-UUAUC-CGGAAUUAUUGGGCGUAAAGCGCGCG-UAG-G-CGGUUU-UUUAAG-UCUG-AUGUG-AAA-GC-CCACGG-CUC-AA-CCGUGG-AGG-G-------------------------------------------UC-A-U----------------------------------------------UGGA-AAC-UGGAA-AAC-U-U-G-AG-UG-----CAGAAG-AGGAA-AGU-GGAAUU-CCA--------------------UGU-GUA-GCG-GUGAAA-UG-C-GCAGAG-AUAUGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGA--CUUUCUG------GUCUC--------------------------------------------------------------UAA-CU--GACG-----CUGA-UG--UGCGAAA-G-C-GUGGG-GAUC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AGUG-CUAAGUG-UUAGGGGG--U---UUCC---------------------------------GC-CCCUUAG-UGCU-GCA-GCUAACGCAU-UAA-GCAC-UCCGCCUG-GGGAGUACGACC-GCAA-GGUU-GAA-ACUC-AAA-GGAAUUG-ACGGGGA-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCAAAUC-UUGACA-UC--------------CUUUG------A-CC-C-U-UCUA-GAGA-U-AG-A-AGU---UU-----CC-----------------------------------------UUCG----------------------------------------------------------------GG---GGA---CA-AAG-U-GA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUA-AG--CUUAG---U-U-GC-C-AU-CA--U--------------------------------UAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AAG-UUGAC-U-GCCG-GU-G-A-CAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--AU-U-U-GGGCUACACACGUGCUACAAUGG-ACAAUA--C-AAA-GGGC-A-GC-G-A-A-ACCG-CG-AGGU-C-----------AA-G-CAAA-UCC-CA-U-AAAGUUG-UUC-UCAGUUCGGA-UUGUAGUC-U-GCAACUC-GACUACA-UGAAGCUGGAAU-CGCUAGUA-AUCGU-AGA-UC-AG-CAU-GCUACGGUG-AAU-ACGUU-CCCGGGUCUUGUA----CACACCGCCCGUC-ACA--CCACGAGA-GUUUGUAACACCC-GAAG-CCGG-UGG-A-GU-AA-CCA---------------------------------UU----------------------------------------UGGAGC-U-AGCCGU-CGAAGGUGGGACAAA-UG-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAUCGGAAGGUG-CGGC-UGGAUCACCUCCUUUCU--------------------------------------------------------------------------------------
+>EscColi5 Escherichia coli subsp K-12
+---------------------------------AAAUUGAAGAGUUU-GAU-CAUGGCUCAGAUUGAAC-GC-UGGC-GGC-A-GG--C-CUAACACAU-GCAAGU-CGA-ACG--GUAA-CAG---------------------------------------------GAAGAAG----------------------------------CUUG----------------------------------CUUCUUU----------------------------------------------G-CUG--AC--GAG-UGG-C-GG--A-CGGGUGAGU---AAU-GUCUGGG-A-A--ACU-GC-CUGAUGGA-GG--GGGAU-AA-CUACU-G-GAAA-CGG-UAG-CUAAUACC-G-CAU-AA---C----------------GUC---------------------------------------------------------------------------------------------G-CAA------------------------------------------------------------------------------------GAC-----------------CAAA--GA-G-GG-G--A-C-C---------UUCG-----------GG---CCUC-UU-G--C----------CA----------UCGG---AUG-U-GCCCAGAU-GGG--A------UU-A-G-CU-A-G---UAGGUG-GG-G-UAAC-GG-CUCACCUA-GGCG-ACG-AUCCCUAGCUGGUCU-G-AG-------------A-GGAU-GACC-AGCCACACUGGAA-CUGA-GA-CACG-GUCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCA--------------------CAAU-GGGC-GCAA-GCCUGAUGCAGCCAUGCCGCG-UGU-AU-GA-AGAA-GGCC--UU-CG-GG-UUGUAAA------------------------GUACUUUC-AG-CGGG-GAG-G------AA-GGGA-GUAAAG-------U-----U-AA-UA----C---CU-UUGC-UCA-UU-GA-CGUU-A-C-CC--G-CAG---------AA-GAAGC-ACC-GGCUAAC-UCCGU---GCCAGCAGCCG-CGGUAAU-AC-GGAG-GGUGCA-A-GCG-UUAAU-CGGAAUUACUGGGCGUAAAGCGCACG-CAG-G-CGGUUU-GUUAAG-UCAG-AUGUG-AAA-UC-CCCGGG-CUC-AA-CCUGGG-AAC-U-------------------------------------------GC-A-U----------------------------------------------CUGA-UAC-UGGCA-AGC-U-U-G-AG-UC-----UCGUAG-AGGGG-GGU-AGAAUU-CCA--------------------GGU-GUA-GCG-GUGAAA-UG-C-GUAGAG-AUCUGGAGG-AAU-A-CCGG--U-G-GCGAAGGCGG--CCCCCUG------GACGA--------------------------------------------------------------AGA-CU--GACG-----CUCA-GG--UGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-UCGA-CUUGGAG-GUUGUGCC-----CUUGA----------------------------------G-GCGUGGC-UUCC-GGA-GCUAACGCGU-UAA-GUCG-ACCGCCUG-GGGAGUACGGCC-GCAA-GGUU-AAA-ACUC-AAA-UGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AUGCAACG-CGAAG-AA-CCUUA-CCUGGUC-UUGACA-UC--------------CACGG------A-AG-U-U-UUCA-GAGA-U-GA-G-AAUG--UG-----CC-----------------------------------------UUCG----------------------------------------------------------------GG----AA---CC-GUG-A-GA--------------------------------------------------CAGGU-GCUGCAUG--UGUCGUCA-GCUCGUGUU-GUGA-AAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUA-UC--CUUUG---U-U-GC-C-AG-CG--G--U-----------------------------CCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-CCGGG-AACU-C-A-AAG-GAGAC-U-GCCA-GU-G-A-UAA-ACU-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCAUCAU-G-GC-CCUUACG--AC-C-A-GGGCUACACACGUGCUACAAUGG-CGCAUA--C-AAA-GAGA-A-GC-G-A-C-CUCG-CG-AGAG-C-----------AA-G-CGGA-CCU-CA-U-AAAGUGC-GUC-GUAGUCCGGA-UUGGAGUC-U-GCAACUC-GACUCCA-UGAAGUCGGAAU-CGCUAGUA-AUCGU-GGA-UC-AG-AAU-GCCACGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUGGGUUGCAAAA-GAAG-UAGG-UAG-C-UU-AA-CC----------------------------------UUC-G--------------------------------------GGAGG-G-CGCUUA-CCACUUUGUGAUUCA-UG-ACU-GGGGUG-AAGUCGUAACAAGGUAACCGUAGGGGAACCUG-CGGU-UGGAUCACCUCCUUA----------------------------------------------------------------------------------------
+>AcbDiazo Acetobacter diazotrophicus
+-----------------------------------------GAGUUU-GAU-UAUGGCUCAGAGCGAAC-GC-UGGC-GGC-A-UG--C-UUAACACAU-GCAAGU-CGC-ACGA-AC--------------------------------------------------------CU----------------------------------UUCG----------------------------------GG----------------------------------------------------------GU--UAG-UGG-C-GG--A-CGGGUGAGU---AAC-GCGUAGG-G-A--UCU-GU-CCAUGGGU-GG--GGGAU-AA-CUCCG-G-GAAA-CUG-GAG-CUAAUACC-G-CAU-GA---C----------------ACC---------------------------------------------------------------------------------------------U-GAG------------------------------------------------------------------------------------GGU-----------------CAAA--GG-C---------------------GCGA-------------------G-UC-G--C----------CU----------GUGG---AGG-A-ACCUGCGU-UCG--A------UU-A-G-CU-G-G---UUGGUG-GG-G-UAAA-GG-CCUACCAA-GGCG-AUG-AUCGAUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGGC-GCAA-GCCUGAUCCAGCAAUGCCGCG-UGU-GU-GA-AGAA-GGUC--UU-CG-GA-UUGUAAA------------------------GCACUUUC-GA-CGGG-GAC-G------A--------------------------U-GA------------------------U-GA-CGGU-A-C-CC--G-UAG---------AA-GAAGC-CCC-GGCUAAC-UUCGU---GCCAGCAGCCG-CGGUAAU-AC-GAAG-GGGGCA-U-GCG-UUGCU-CGGAAUGACUGGGCGUAAAGGGCGCG-UAG-G-CGGUUU-GGACAG-UCAG-AUGUG-AAA-UU-CCUGGG-CUU-AA-CCUGGG-GGC-U-------------------------------------------GC-A-U----------------------------------------------UUGA-UAC-GUACA-GAC-U-A-G-AG-UG-----UGAGAG-AGGGU-UGU-GGAAUU-CCC--------------------AGU-GUA-GAG-GUGAAA-UU-C-GUAGAU-AUUGGGAAG-AAC-A-CCGG--U-G-GCGAAGGCGG--CAACCUG------GCUCA--------------------------------------------------------------UAA-CU--GACG-----CUGA-GG--CGCGAAA-G-G-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCUGUAAACGAUG-UGUG-CUGGAUG-UUGGGUGG--C---UUA----------------------------------GC-CCCUCAG-UGUC-GUA-GUUAACGCGA-UAA-GCAC-ACCGCCUG-GGGAGUACGGCC-GCAA-GGUU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGCAG-AA-CCUUA-CCAGGGC-UUGACA-UG-------------GGGAGG------C-UG-C-A-GUCA-GAGA-U-GG-C-UGUU--UC-----CC-----------------------------------------GCAA----------------------------------------------------------------GG----GA---CC-UCCUG-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUCG-CC--UUUAG---U-U-GC-C-AG-CA--U-------------------------------GAUUGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUGGG-CACU-C-U-AAA-GGAAC-U-GCCG-GU-G-A-CAA-GCC-G--GUGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUAUG--UC-C-U-GGGCUACACACGUGCUACAAUGG-CGGUGA--C-AGU-GGGA-A-GC-C-A-G-GCAG-CG-AUGC-C-----------GA-G-CUGA-UCU-CA---AAAAGCC-GUC-UCAGUUCGGA-UUGCACUC-U-GCAACUC-GAGUGCA-UGAAGGUGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUUGGUUUGACCU-UAAG-CCGG-UGA-G-CG-AA-CCCA--------------------------------GCA-A------------------------------------UGGGGCG-C-AGC-GA-CCACGGUCGGGUCAG-CG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCCUUU----------------------------------------------------------------------------------------
+>HaoHalo2 Halobacterium halobium
+--------------------------------------AUUCCGGUU-GAU-CCUGCCGGAGGCC-AUU-GC-UAUC-GGA-GUCC--GAUUUAGCCAU-GCUAGU-UGU-GCGG-GU--------------------------------------------------------------------------------------------UUAG----------------------------------------------------------------------------------------------AC--CCG-CAG-C-GG--A-AAGCUCAGU---AAC-ACGUGGC-CAA--GCU-AC-CCUGUGGA-CG--GGAAU-AC-UCUCG-G-GAAA-CUG-AGG-CUAAUCCC-C-GAU-A------A-CGC-U--U-UG-CUCC--------------------------------------------------------------------------------------------UG-GAAG-----------------------------------------------------------------------------------GGG--C-A--A--AG-CCG-GAAA-CGC-----------------------UCCG---------------------GC-G--C----------CA----------CAGG---AUG-C-GGCUGCGG-UCC--A------UU-A-G-GU-A-G---ACGGUG-GG-G-UAAC-GG-CCCACCGU-GCCC-AUA-AUCGGUACGGGUUGU-G-AG-------------A-GCAA-GAGC-CCGGAGACGGAAU-CUGA-GA-CAAG-AUUCCGG-GCC-C-UACG--GGGC-GC-A-GC-A-G-GCGCG-AAACCUUUA--------------------CACU-GUAC-GAAA-GUGCGAUAAGGGGACUCCGAG-UGU-GA-A-----G-GC----AUAGA----GCC--U-------------------------UCACUUUU-GU-ACAC-C-------------------------------G-----U-AA-GG----U--------------------------G-G-UG--C-ACG---------AA-UAAGG-ACUGGGCAAGA-CCGGU---GCCAGCCGCCG-CGGUAAU-AC-CGG-CAGUCCG-A-GUG-AUGGC-CGAUCUUAUUGGGCCUAAAGCGUCCG-UAG-C-UGGCUG-AACAAG-UCCG-UUGGG-AAA-UC-UGUCCG-CUU-AA-CGGGCA-GGCGU-------------------------------------------CC-A-G----------------------------------------------CGGA-AAC-UGUUC-AGC-U-U-G-GG-AC-----CGGAAG-ACCUG-AGG-GGUACG-UCU--------------------GGG-GUA-GGA-GUGAAA-UC-C-UGUAAU-CCUGGACGG-ACC-G-CCGG--U-G-GCGAAAGCGC--CUCAGGA------GAACG--------------------------------------------------------------GAU-CC--GACAG-----UGA-GG--GACGAAA-G-C-UAGGG-UCUC-GAACCGG-AUUAGAUAC-----CCGGGUAG-UCCUA-GCUGUAAACGAUG-UCCG-CUAGGUG-UGGCGCAG--GC-UACGA--------------------------------GCC-UGCGCUG-UGCC-GUA-GGGAAGCCGA-GAA-GCGG-ACCGCCUG-GGAAGUACGUCU-GCAA-GGAU-GAA-ACUU-AAA-GGAAUUG-GCGGGGG-AGC--ACUA--CA-A-CCG-GAGGAG-CC-UGCGGU-UUAAUUG-G-ACUCAACG-CCGGA-CA-UCUCA-CCAGCCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACAGUAGUAAUGACGGUCAGGUUGAUGACCUUACCC-GAGGCUACUGAGAGGA-GGUGCAUGGCCGCCGUCA-GCUCGUACC-GUGA-GGCGU-CCUG-UUAA-GU-CAGGCAAC-GAGCGAGACC-CGCA-CU--CCUAA---U-U-GC-C-AG-CG--G--UACCC-------------------------UUU--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGU---AGCUGGG-UACA-U-U-AGG-UGGAC-U-GCCG-CU-G-C-CAA-AGC-G--GAGG-A-AGG-A-ACGG-GCAACGGU--AGGUCAGUAU-G-CC-CCGAAUG--GG-C-U-GGGCAACACGCGGGCUACAAUGG-UCGAGA--C-AAU-GGGA-A-GC-C-A-C-UCCG-AG-AGGA-G-----------GC-G-CUAA-UCU-CC-U-AAACUCG-AUC-GUAGUUCGGA-UUGAGGGC-U-GAAACUC-GCCCUCA-UGAAGCUGGAUU-CGGUAGUA-AUCGC-GUG-UC-AGC-AG-CGCGCGGUG-AAU-ACGUC-CCUGCUCCUUGCA----CACACCGCCCGUC-AAA--UCACCCGA-GUGGGGUUCGGAU-GA-G-GCCG-G-C---------------------------------------------AUG-C----------------------------------------------GCUGGU-CAAAUCUGGGCUCCG-CA-AGG-GGGAUU-AAGUCGUAACAAGGUAGCCGUAGGGGAAUCUG-CGGC-UGGAUCACCUCCU------------------------------------------------------------------------------------------
+>AcbPaste Acetobacter pasteurianus
+-----------------------------------------GAGUUU-GAU-UCUGGCUCAGAGCGAAC-GC-UGGC-GGC-A-UG--C-UUAACACAU-GCAAGU-CGC-ACGA-AG--------------------------------------------------------GU----------------------------------UUCG----------------------------------GC----------------------------------------------------------CU--UAG-UGG-C-GG--A-CGGGUGAGU---AAC-GCGUAGG-U-A--UCU-AU-CCAUGGGU-GG--GGGAU-AA-CACUG-G-GAAA-CUG-GUG-CUAAUACC-G-CAU-GA---C----------------ACC---------------------------------------------------------------------------------------------U-GAG------------------------------------------------------------------------------------GGU-----------------CAAA--GG-C---------------------GCAA-------------------G-UC-G--C----------CU----------GUGG---AGG-A-GCCUGCGU-UUG--A------UU-A-G-CU-A-G---UUGGUG-GG-G-UAAA-GG-CCUACCAA-GGCG-AUG-AUCAAUAGCUGGUUU-G-AG-------------A-GGAU-GAUC-AGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGGG-GCAA-CCCUGAUCCAGCAAUGCCGCG-UGU-GU-GA-AGAA-GGUC--UU-CG-GA-UUGUAAA------------------------GCACUUUC-GA-CGGG-GAC-G------A--------------------------U-GA------------------------U-GA-CGGU-A-C-CC--G-UAG---------AA-GAAGC-CCC-GGCUAAC-UUCGU---GCCAGCAGCCG-CGGUAAU-AC-GAAG-GGGGCU-A-GCG-UUGCU-CGGAAUGACUGGGCGUAAAGGGCGUG-UAG-G-CGGUUU-GUACAG-UCAG-AUGUG-AAA-UC-CCCGGG-CUU-AA-CCUGGG-AGC-U-------------------------------------------GC-A-U----------------------------------------------UUGA-UAC-GUGCA-GAC-U-A-G-AG-UG-----UGAGAG-AGGGU-UGU-GGAAUU-CCC--------------------AGU-GUA-GAG-GUGAAA-UU-C-GUAGAU-AUUGGGAAG-AAC-A-CCGG--U-G-GCGAAGGCGG--CAACCUG------GCUCA--------------------------------------------------------------UUA-CU--GACG-----CUGA-GG--CGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCUGUAAACGAUG-UGUG-CUAGAUG-UUGGGUGA--C---UUA----------------------------------GU-CAUUCAG-UGUC-GCA-GUUAACGCGU-UAA-GCAC-ACCGCCUG-GGGAGUACGGCC-GCAA-GGUU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGCAG-AA-CCUUA-CCAGGGC-UUGA-A-UG-------------UAGAGG------C-UG-C-A-AGCA-GAGA-U-GU-U-UGUU--UC-----CC-----------------------------------------GCAA----------------------------------------------------------------GG----GA---CC-UCUAA-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CCUA-UC--UUUAG---U-U-GC-C-AU-CA--G-------------------------------GUUGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CUGGG-CACU-C-U-AGA-GAGAC-U-GCCG-GU-G-A-CAA-GCC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUAUG--UC-C-U-GGGCUACACACGUGCUACAAUGG-CGGUGA--G-AGU-GGGA-A-GC-U-A-G-GUGG-UG-ACAC-C-----------AU-G-GUGA-UCU-CU---AAAAGCC-GUC-UCAGUUCGGA-UUGCACUC-U-GCAACUC-GAGUGCA-UGAAGGUGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUUGGUUUGACCU-UAAG-CCGG-UGA-G-CG-AA-CC----------------------------------GCA-A--------------------------------------GGACG-C-AGCCGA-CCACGGUCGGGUCAG-CG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCCUUU----------------------------------------------------------------------------------------
+>HamHalod Halomonas halodenitrificans
+----------------------------------------AGAGUUU-GAU-CCUGGCUCA-GCUUAAC-GC-UGGC-GGC-A-GG--C-CUAACACAU-GCAAGU-CGA-GCG--GAAA-CGA----------------------------------------------UGGAAG----------------------------------CUUG----------------------------------CUUCCA-----------------------------------------------G-GCG--UC--GAG-CGG-C-GG--A-CGGGUGAGU---AAU-GCAUAGG-A-A--UCU-AC-CCGGUAGU-GG--GGGAU-AA-CCUGG-G-GAAA-CUC-AGG-CUAAUACC-G-CAU-AC---G----------------UCC---------------------------------------------------------------------------------------------U-ACG------------------------------------------------------------------------------------GGA-----------------GAAA--GC-A-GG-G-GA-U-C---------UUCG-----------GA---CCUU-GC-G--C----------UA----------UCGG---AUG-A-GCCUAUGC-CGG--A------UU-A-G-UU-A-G---UUGGUG-AG-G-UAAC-GG-CUCACCAA-GACC-GCG-AUCCGUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACACCGGGA-CUGA-GA-CACG-GCCCGGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGGC-GAAA-GCCUGAUCCAGCCAUGCCGCG-UGU-GU-GA-AGAA-GGCU--UU-CG-GG-UUGUAAA------------------------GCACUUUC-AG-UGGG-GAA-G------AA-AUCC-UCGGGG-------C-----C-AA-UA----C---CU-CCGA-GGG-AG-GA--AUC-A-C-CC--A-CAG---------AA-GAAGC-AC--GGCUAAC-UC-GU---GCCAGCAGCCG-CGGUAAU-AC-GGAG-GGUGCA-A-GCG-UUAAU-CGGAAUUACUGGGCGUAAAGCGCGCG-UAG-G-CGGCGU-GAUCAG-CCAG-UUGUG-AAA-GC-CCCGGG-CUC-AA-CCUGGG-AAC-A-------------------------------------------GC-A-U----------------------------------------------CCGG-AAC-UGUCA-CGC-U-A-G-AG-UG-----CAGGAG-AGGAA-GGU-AGAAUU-CCC--------------------GGU-GUA-GCG-GUGAAA-UG-C-GUAGAU-AUAGGAAGG-AAU-A-CCAG--U-G-GCGAAGGCGG--CCUUCUG------GACUG--------------------------------------------------------------ACA-CU--GACG-----CUGA-GG--UGCGAAA-G-C-GUGGG-UAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-UCGA-CUAGCCG-UUGGGGUC-----CUUGU----------------------------------G-ACCUUUG-UGGC-GAA-GUUAACGCGA-UAA-GUCG-ACCGCCUG-GGGAGUACGGCC-GCAA-GGUU-AAA-ACUC-AAA-UGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AUGCAACG-CGAAG-AA-CCUUA-CCUACUC-UUGACA-UC--------------GUGCG------A-AC-U-U-GUGA-GAGA-U-CA-C-UUGG--UG-----CC-----------------------------------------UUCG----------------------------------------------------------------GG----AA---CG-CAC-A-GA--------------------------------------------------CAGGU-GCUGCAUGGCCGUCGUCA-GCUCGUGUU-GUGA-AAUGU-UGGG-UUAA-GU-CCCGUAAC-GAGCGCAACC-CCUA-UC--CCUAU---U-U-GC-C-AG-CG--A--U-----------------------------UCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-UCGGG-AACU-C-U-AGG-GAGAC-U-GCCG-GU-G-A-CAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AGGUCAUCAU-G-GC-CCAUACG--AG-U-A-GGGCUACACACGUGCUACAAUGG-CCGGUA--C-AAA-GGGU-U-GC-A-A-U-AUCG-CG-AGAU-G-----------UA-G-CUAA-UCC-CG-A-AAAGCCG-GUC-UCAGUCCGGA-UCGGAGUC-U-GCAACUC-GACUCCG-UGAAGUCGGAAU-CGCUAGUA-AUCGU-AGA-UC-AG-AAU-GCUACGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUGGACUGCACCA-GAAG-UGGU-UAG-C-CU-AA-C-----------------------------------UUC-G---------------------------------------GAGG-G-CGAUCA-CCACGGUGUGGUUCA-UG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCCUU-----------------------------------------------------------------------------------------
+>BaiLich3 Bacillus licheniformis
+---------------------------------NNNNNNNAGAGUUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-CUAAUACAU-GCAAGU-CGA-GCGG-AC---CGA----------------------------------------------CGGGAG----------------------------------CUUG----------------------------------CUCCCU-------------------------------------------------UAG--GU--CAG-CGG-C-GG--A-CGGGUGAGU---AAC-ACGUGGG-UAA--CCU-GC-CUGUAAGA-CU--GGGAU-AA-CUCCG-G-GAAA-CCG-GGG-CUAAUACC-G-GAU-GC---U-U-GAU-U--G-A---ACC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GGU----U--C--AA-UCAUAAAA--GG-U-GG-C----U-----------UUU-------------A---GCUA-CC-A--C----------UU----------ACAG---AUG-G-ACCCGCGG-CGC--A------UU-A-G-CU-A-G---UUGGUG-AG-G-UAAC-GG-CUCACCAA-GGCG-ACG-AUGCGUAGCCGACCU-G-AG-------------A-GGGU-GAUC-GGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UAGGG-AAUCUUCCG--------------------CAAU-GGAC-GAAA-GUCUGACGGAGCAACGCCGCG-UGA-GU-GA-UGAA-GGUU--UU-CG-GA-UCGUAAA------------------------ACUCUGUU-GU-UAGG-GAA-G--A---AC-AAGU-ACCGUU-------C-----G-AA-UA----G---GG-CGGU-ACC-UU-GA-CGGU-A-C-CU--A-ACC---------AG-AAAGC-CAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GUGGCA-A-GCG-UUGUC-CGGAAUUAUUGGGCGUAAAGCGCGCG-CAG-G-CGGUUU-CUUAAG-UCUG-AUGUG-AAA-GC-CCCCGG-CUC-AA-CCGGGG-AGG-G-------------------------------------------UC-A-U----------------------------------------------UGGA-AAC-UGGGG-AAC-U-U-G-AG-UG-----CAGAAG-AGGAG-AGU-GGAAUU-CCA--------------------CGU-GUA-GCG-GUGAAA-UG-C-GUAGAG-AUGUGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGA--CUCUCUG------GUCUG--------------------------------------------------------------UAA-CU--GACG-----CUGA-GG--CGCGAAA-G-C-GUGGG-GAGC-GAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AGUG-CUAAGUG-UUAGAGGG--U---UUCC---------------------------------GC-CCUUUAG-UGCU-GCA-GCAAACGCAU-UAA-GCAC-UCCGCCUG-GGGAGUACGGUC-GCAA-GACU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCAGGUC-UUGACA-UC--------------CUCUG------A-CA-A-C-CCUA-GAGA-U-AG-G-GCUU--CC-----CC-----------------------------------------UUCG----------------------------------------------------------------GG----GG---CA-GAG-U-GA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-AU--CUUAG---U-U-GC-C-AG-CA--U--------------------------------UCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AAG-GUGAC-U-GCCG-GU-G-A-CAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--AC-C-U-GGGCUACACACGUGCUACAAUGG-GCAGAA--C-AAA-GGGC-A-GC-G-A-A-GCCG-CG-AGGC-U-----------AA-G-CCAA-UCC-CA-C-AAAUCUG-UUC-UCAGUUCGGA-UCGCAGUC-U-GCAACUC-GACUGCG-UGAAGCUGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCACGAGA-GUUUGUAACACCC-GAAG-UCGG-UGA-G-GU-AA-CCU---------------------------------UUU----------------------------------------GGAGC-C-AGCCGC-CGAAGGUGGGACAGA-UG-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAUCGGAAGGUG-CGGC-UGGAUCACCUCCUUUCU--------------------------------------------------------------------------------------
+>AcbEuro2 Acetobacter europaeus
+-----------------------------------------GAGUUU-GAU-CAUGGCUCAGAGCGAAC-GC-UGGC-GGC-A-UG--C-UUAACACAU-GCAAGU-CGC-ACGA-AC--------------------------------------------------------CU----------------------------------UUCG----------------------------------GG----------------------------------------------------------GU--UAG-UGG-C-GG--A-CGGGUGAGU---AAC-GCGUAGG-G-A--UCU-GU-CCAUGGGU-GG--GGGAU-AA-CUUUG-G-GAAA-CUG-AAG-CUAAUACC-G-CAU-GA---C----------------ACC---------------------------------------------------------------------------------------------U-GAG------------------------------------------------------------------------------------GGU-----------------CAAA--GG-C---------------------GCAA-------------------G-UC-G--C----------CU----------GUGG---AGG-A-ACCUGCGU-UCG--A------UU-A-G-CU-A-G---UUGGUG-GG-G-UAAA-GG-CCUACCAA-GGCG-AUG-AUCGAUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGGC-GCAA-GCCUGAUCCAGCAAUGCCGCG-UGU-GU-GA-AGAA-GGUU--UU-CG-GA-UUGUAAA------------------------GCACUUUC-AG-CGGG-GAC-G------A--------------------------U-GA------------------------U-GA-CGGU-A-C-CC--G-CAG---------AA-GAAGC-CCC-GGCUAAC-UUCGU---GCCAGCAGCCG-CGGUAAU-AC-GAAG-GGGGCA-A-GCG-UUGCU-CGGAAUGACUGGGCGUAAAGGGCGCG-UAG-G-CGGUUG-ACACAG-UCAG-AUGUG-AAA-UU-CCUGGG-CUU-AA-CCUGGG-GGC-U-------------------------------------------GC-A-U----------------------------------------------UUGA-UAC-GUGGC-GAC-U-A-G-AG-UG-----UGAGAG-AGGGU-UGU-GGAAUU-CCC--------------------AGU-GUA-GAG-GUGAAA-UU-C-GUAGAU-AUUGGGAAG-AAC-A-CCGG--U-G-GCGAAGGCGG--CAACCUG------GCUCA--------------------------------------------------------------UGA-CU--GACG-----CUGA-GG--CGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCUGUAAACGAUG-UGUG-CUGGAUG-UUGGGUGA--C---UUU----------------------------------GU-CAUUCAG-UGUC-GUA-GUUAACGCGA-UAA-GCAC-ACCGCCUG-GGGAGUACGGCC-GCAA-GGUU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGCAG-AA-CCUUA-CCAGGGC-UUGACA-UG------------C-GGAGG------C-CG-U-G-UCCA-GAGA-U-GG-G-CAUU--UC-----UC-----------------------------------------GCAA----------------------------------------------------------------GA----GA---CC-UCCAG-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUCG-CC--UUUAG---U-U-GC-C-AU-CA--C-------------------------------GUCUGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUGGG-CACU-C-U-AAA-GGAAC-U-GCCG-GU-G-A-CAA-GCC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUAUG--UC-C-U-GGGCUACACACGUGCUACAAUGG-CGGUGA--C-AGU-GGGA-A-GC-C-A-G-GU-G-CG-AUAC-C-----------GA-G-CCGA-UCU-CA---AAAAGCC-GUC-UCAGUUCGGA-UUGCACUC-U-GCAACUC-GAGUGCA-UGAAGGUGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUUGGUUUGACCU-UAAG-CCGG-UGA-G-CG-AA-CC----------------------------------GCA-A--------------------------------------GGACG-C-AGCCGA-CCACGGUCGGGUCAG-CG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCCUUU----------------------------------------------------------------------------------------
+>PlnLimno Planctomyces limnophilus
+-----------------------------------------GAGUUU-GAU-CCUGGCUCAGAAUGAAC-GU-UGGC-GGC-A-UG--G-AUUAGGCAU-GCAAGU-CGA-GGGA-GAA------------------------------------------------------CCC----------------------------------GCAA----------------------------------GGG---------------------------------------------------------GA--CAC-CGG-C-GA--A-CGGGGUAGG---AAU-ACAUAGG-UAA--CGU-AC-CCUCAGGA-CG--GGGAU-AG-CCAAG-G-GAAA-CUU-UGG-GUAAUACC-C-GAU-GU---G-A-UGU-C--A-GG---AU---------------------------------------------------------------------------------------------G-UGA------------------------------------------------------------------------------------AUG--C-C--U--GC-CAU-CAAA--GG-U-G-------------------AGA-------------------UU-CC-A--C----------CU----------GAGG---AGC-G-GCUUAUGC-AUC--A------UU-A-G-CU-U-G---UUGGCG-GG-G-UAAC-GG-CCCACCAA-GGCU-GCG-AUGAUUAGGGGGUGU-G-AG-------------A-GCAU-GGCC-CCCACCACUGGCA-CUGA-GA-CACU-GGCCAGA-CAC-C-UACG--GGUG-GC-U-GC-A-G-UCGAG-AAUCUUCGG--------------------CAAU-GGGC-GAAA-GCCUGACCGAGCGAUGCCGCG-UGC-GG-GA-UGAA-GGCC--UU-CG-GG-UUGUAAA------------------------CCGCUGUC-GG-AGGG-GAU-G--A-A-GU--GUA-UGGGAG-------------C-AA-U---------CU-CCUG-UAU-UU-GA-CAGA-G-C-CU--C-GGA----------G-GAAGC-ACG-GGCUAAG-UUCGU---GCCAGCAGCCG-CGGUAAU-AC-GAAC-UGUGCA-A-ACG-UUAUU-CGGAAUCACUGGGCUUACAGGGUGCG-UAG-G-CGGCAU-UUUAAG-UCAG-GUGUG-AAA-UC-CCCCGG-CUC-AA-CCGGGG-AAC-U-------------------------------------------GC-G-C----------------------------------------------CUGA-GAC-UGGAU-UGC-U-C-G-AG-UG-----AGGCAG-GGGUG-UAC-GGAACU-UCC--------------------GGU-GGA-GCG-GUGAAA-UG-U-GUAGAU-AUCGGAAGG-AAC-G-CCAG--C-A-GCGAAAGCGG--UACACUG------GGCCU--------------------------------------------------------------UGU-CU--GACG-----CUGA-GG--CACGAAA-G-C-CAGGG-UAGC-GAACGGG-AUUAGAUAC-----CCCGGUAG-UCCUG-GCCGUAAACAAUG-AGCA-CUGGGGG-AGGGACGG------GUCA----------------------------------C-CGUUCUU-UCCC-GUA-GCGAAAGCGU-UAA-GUGC-UCCGCCUG-GGGAGUAUGGUC-GCAA-GGCU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CUC--AC-A--CA-A-GCG-GUGGAG-CA-UGUGGC-UUAAUUC-G-AGGCAACG-CGAAG-AA-CCUUAUCCUAGAC-UUGACA-UG------------G-UGGGA----U-U-AG-U-U-GGCU-GAAA-G-GU-C-AAUG--ACG----CC-----------------------------------------UUCG----------------------------------------------------------------GG---UGG---AA-CCA-U-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-CGCG-UUAA-GU-CGCUAAAC-GAGCGAAACC-CCUG-UU--CUUAG---U-U-GC-C-AA-CA--C-------------------------------GUCAUG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUGGG-GACU-C-U-AAG-AAGAC-C-GCCG-GC-G-U-CAA-GCC-G--GAGG-A-AGG-C-GGGG-AUGACGUC---AGUCCUCAU-G-GC-CUUUAUG--UC-U-A-GGGCUGCACACGUGCUACAAUGG-GAUGUA--C-AGA-GGGA-C-GC-C-A-A-GCUG-CG-AAGC-C-----------GA-G-CAAA-CCC-CA-A-AAAGCAU-CCC-UCAGUUCGGA-UUGCAGGC-U-GCAACUC-GCCUGCA-UGAAGCCGGAAU-CGCUAGUA-AUCGC-CGG-UC-AGCAAU-ACGGCGGUG-AAU-GUGUU-CCUGAGCCUUGUA----CACACCGCCCGUC-AAG--CCACGAAA-GCGGGGGGCGCCU-AAAG-ACAC-UUG-U-CU-AA-CC----------------------------------GUA-A--------------------------------------GGAGG-A-CGGUGU-UUAGGGCGAAACUCG-UG-AUU-GGGACU-AAGUNGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCCUUUCU--------------------------------------------------------------------------------------
+>AgrTume9 Agrobacterium tumefaciens 5
+-------------------------------------------GUUU-GAU-CCUGGCUCAGAACGAAC-GC-UGGC-GGC-A-GG--C-UUAACACAU-GCAAGU-CGA-GCGC-CC---------------------------------------------------------C----------------------------------GCAA----------------------------------G-----------------------------------------------------------GG--GAG-CGG-C-AG--A-CGGGUGAGU---AAC-GCGUGGG-A-A--UCU-AC-CUUUUGCU-AC--GGAAU-AA-CGCAG-G-GAAA-CUU-GUG-CUAAUACC-G-UAU-GU---G----------------UCC---------------------------------------------------------------------------------------------U-UCG------------------------------------------------------------------------------------GGA-----------------GAAA--GA-----------------------UUUA---------------------UC-G--G----------CA----------AGAG---AUG-A-GCCCGCGU-UGG--A------UU-A-G-CU-A-G---UUGGUG-GG-G-UAAA-GG-CCUACCAA-GGCG-ACG-AUCCAUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACAUUGGGA-CUGA-GA-CACG-GCCCAAA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGGC-GCAA-GCCUGAUCCAGCCAUGCCGCG-UGA-GU-GA-UGAA-GGCC--CU-AG-GG-UUGUAAA------------------------GCUCUUUC-AC-CGGA-GAA-G------A--------------------------U-AA------------------------U-GA-CGGU-A-U-CC--G-GAG---------AA-GAAGC-CCC-GGCUAAC-UUCGU---GCCAGCAGCCG-CGGUAAU-AC-GAAG-GGGGCU-A-GCG-UUGUU-CGGAAUUACUGGGCGUAAAGCGCACG-UAG-G-CGGAUC-GAUCAG-UCAG-GGGUG-AAA-UC-CCAGGG-CUC-AA-CCCUGG-AAC-U-------------------------------------------GC-C-U----------------------------------------------UUGA-UAC-UGUCG-AUC-U-G-G-AG-UA-----UGGAAG-AGGUG-AGU-GGAAUU-CCG--------------------AGU-GUA-GAG-GUGAAA-UU-C-GUAGAU-AUUCGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGG--CUCACUG------GUCCA--------------------------------------------------------------UUA-CU--GACG-----CUGA-GG--UGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AAUG-UUAGCCG-UCGGGCAG------UAUA----------------------------------C-UGUUCGG-UGGC-GCA-CGUAACGCAU-UAA-ACAU-UCCGCCUG-GGGAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGCAG-AA-CCUUA-CCAGCCC-UUGACA-UC-------------CUGUGU--------UA-C-C-UCUA-GAGA-U-AG-G-GGGU-CCA------C-----------------------------------------UUCG----------------------------------------------------------------G-----UG---GC-GCAGA-GA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUCG-CC--CUUAG---U-U-GC-C-AG-CA--U--------------------------------UUAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AAG-GGGAC-U-GCCG-GU-G-A-UAA-GCC-GA-GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUACG--GG-C-U-GGGCUACACACGUGCUACAAUGG-UGGUGA--C-AGU-GGGC-A-GC-G-A-G-CACG-CG-AGUG-U-----------GA-G-CUAA-UCU-CC---AAAAGCC-AUC-UCAGUUCGGA-UUGCACUC-U-GCAACUC-GAGUGCA-UGAAGUUGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUUGGUUUUACCC-GAAG-GUAG-UGC-G-CU-AA-CC----------------------------------GCA-A--------------------------------------GGAGG-C-AGCUAA-CCACGGUAGGGUCAG-CG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCC-------------------------------------------------------------------------------------------
+>BodHolme Bordetella holmesii
+--------------------------------------UAAGAGUUU-GAU-CCUGGCUCAGAUUGAAC-GC-UGGC-GGG-A-UG--C-UUUACACAU-GCAAGU-CGG-ACG--GCAG-CAC-----------------------------------------------GGGGC----------------------------------UUCG----------------------------------GCCU-------------------------------------------------G-GUG--GC--GAG-UGG-C-GA--A-CGGGUGAGU---AAU-GUAUCGG-A-A--CGU-GC-CCGGUAGC-GG--GGGAU-AA-CUACG-C-GAAA-GCG-UGG-CUAAUACC-G-CAU-AC---G----------------CCC---------------------------------------------------------------------------------------------U-ACG------------------------------------------------------------------------------------GGG-----------------GAAA--GC-G-GG-G-GA-C-C---------UUCG-----------GG---CCUC-GC-A--C----------UA----------UUGG---AGC-G-GCCGAUAU-CGG--A------UU-A-G-CU-A-G---UUGGUG-GG-G-UAAC-GG-CCUACCAA-GGCG-ACG-AUCCGUAGCUGGUUU-G-AG-------------A-GGAC-GACC-AGUCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUUUUGGA--------------------CAAU-GGGG-GCAA-CCCUGAUCCAGCCAUCCCGCG-UGU-GC-GA-UGAA-GGCC--UU-CG-GG-UUGUAAA------------------------GCACUUUU-GG-CAGG-AAA-G------AA-ACGG-CACGGG-------C-----U-AA-UA----U---CC-UGUG-CAA-CU-GA-CGGU-A-C-CU--G-CAG---------AA-UAAGC-ACC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GGUGCA-A-GCG-UUAAU-CGGAAUUACUGGGCGUAAAGCGUGCG-CAG-G-CGGUUC-GGAAAG-AAAG-AUGUG-AAA-UC-CCAGGG-CUU-AA-CCUUGG-AAC-U-------------------------------------------GC-A-U----------------------------------------------UUUU-AAC-UACCG-AGC-U-A-G-AG-UG-----UGUCAG-AGGGA-GGU-GGAAUU-CCG--------------------CGU-GUA-GCA-GUGAAA-UG-C-GUAGAU-AUGCGGAGG-AAC-A-CCGA--U-G-GCGAAGGCAG--CCUCCUG------GGAAU--------------------------------------------------------------ACA-CU--GACG-----CUCA-UG--CACGAAA-G-U-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCCUAAACGAUG-UCAA-CUAGCUG-UUGGGGCC------UUCG----------------------------------G-GCCUUGG-UAGC-GCA-GCUAACGCGU-GAA-GUUG-ACCGCCUG-GGGAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGA-CCC--GC-A--CA-A-GCG-GUGGAU-GA-UGUGGA-UUAAUUC-G-AUGCAACG-CGAAA-AA-CCUUA-CCUACCC-UUGACA-UG--------------UCUGG------A-AU-C-C-CGAA-GAGA-U-UU-G-GGAG--UGC----UC-----------------------------------------GCAA----------------------------------------------------------------GA---GAA---CC-GGA-A-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-UC--AUUAG---U-U-GC-U-A--C------------------------------------GAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGG-CACU-C-U-AAU-GAGAC-U-GCCG-GU-G-A-CAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUAUG--GG-U-A-GGGCUUCACACGUCAUACAAUGG-UCGGGA--C-AGA-GGGU-U-GC-C-A-A-CCCG-CG-AGGG-G-----------GA-G-CCAA-UCC-CA-G-AAACCCG-GUC-GUAGUCCGGA-UCGCAGUC-U-GCAACUC-GACUGCG-UGAAGUCGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GUCGCGGUG-AAU-ACGUU-CCCGGGUCUUGUA----CACACCGCCCGUC-ACU--CCAUGGGA-GUGGGUUUUACCA-GAAG-UAGU-UAG-C-CU-AA-CC----------------------------------GCA-A--------------------------------------GGGGG-G-CGAUUA-CCACGGUAGGAUUCA-UG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAUCGGAAGGUG-CGGC-UGGAUCACCUCCU------------------------------------------------------------------------------------------
+>AcbMetha Acetobacter methanolicus
+-----------------------------------------GAGUUU-GAU-CAUGGCUCAGAGCGAAC-GC-UGGC-GGC-A-UG--C-UUAACACAU-GCAAGU-CGC-ACGA-GG--------------------------------------------------------GU----------------------------------UUCG----------------------------------GC----------------------------------------------------------CC--UAG-UGG-C-GG--A-CGGGUGAGU---AGC-GCGUAGG-G-A--UCU-AU-CCAUGGGU-GG--GGGAU-AA-CACUG-G-GAAA-CUG-GAG-CUAAUACC-G-CAU-GA---U----------------GCC---------------------------------------------------------------------------------------------U-GAG------------------------------------------------------------------------------------GGC-----------------CAAA--GG-C---------------------GCGA-------------------G-UC-G--C----------CU----------GUGG---AGG-A-GCCUGCGU-UCG--A------UU-A-G-CU-U-G---UUGGUG-GG-G-UAAA-GG-CCUACCAA-GGCG-AUG-AUCGAUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGGG-GCAA-CCCUGAUCCAGCAAUGCCGCG-UGU-GU-GA-AGAA-GGUC--UU-CG-GA-UUGUAAA------------------------GCACUUUC-GA-CGGG-GAC-G------A--------------------------U-GA------------------------U-GA-CGGU-A-C-CC--G-UAG---------AA-GAAGC-CCC-GGCUAAC-UUCGU---GCCAGCAGCCG-CGGUAAU-AC-GAAG-GGGGCU-A-GCG-UUGCU-CGGAAUGACUGGGCGUAAAGGGCGCG-UAG-G-CGGUUG-ACACAG-UCAG-AUGUG-AAA-UU-CCAGGG-CUU-AA-CCUUGG-GGC-U-------------------------------------------GC-A-U----------------------------------------------UUGA-GAC-GUGUU-GAC-U-G-G-AG-UU-----CGAGAG-AGGGU-UGU-GGAAUU-CCC--------------------AGU-GUA-GAG-GUGAAA-UU-C-GUAGAU-AUUGGGAAG-AAC-A-CCGG--U-G-GCGAAGGCGG--CAACCUG------GCUCG--------------------------------------------------------------AUA-CU--GACG-----CUGA-GG--CGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCUGUAAACGGUG-UGUG-CUGGAUG-UUGGGUGA--C---UUU----------------------------------GU-CACUCAG-UGUC-GAA-GCUAACGCGC-UAA-GCAC-ACCGCCUG-GGGAGUACGGCC-GCAA-GGUU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGCAG-AA-CCUUA-CCAGGGC-UUGACA-UG-------------GGGAGG------C-UA-U-A-UCCA-GAGA-U-GG-G-CAUU--UC-----CC-----------------------------------------GCAA----------------------------------------------------------------GG----GA---CC-UCCUG-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-CC--UUUAG---U-U-GC-C-AG-CA--U-------------------------------GAUCGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUGGG-CACU-C-U-AGA-GGAAC-U-GCCG-GU-G-A-CAA-GCC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUAUG--UC-C-U-GGGCUACACACGUGCUACAAUGG-CGGUGA--C-AGU-GGGA-A-GC-C-A-G-GCAG-UG-AUGC-U-----------GA-G-CUGA-UCU-CA---AAAAGCC-GUC-UCAGUUCGGA-UUGCACUC-U-GCAACUC-GGGUGCA-UGAAGGUGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUUGGUUUGACCU-UAAG-CCGG-UGA-G-CG-AA-CC----------------------------------GCA-A--------------------------------------GGACG-C-AGCCGA-CCACGGUCAGGUCAG-CG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-AGGAUCACCUCCUUU----------------------------------------------------------------------------------------
+>AcbLique Acetobacter liquefaciens
+-----------------------------------------GAGUUU-GAU-CAUGGCUCAGAGCGAAC-GC-UGGC-GGC-A-UG--C-UUAACACAU-GCAAGU-CGC-ACGA-AC--------------------------------------------------------CU----------------------------------UUCG----------------------------------GG----------------------------------------------------------GU--UAG-UGG-C-GG--A-CGGGUGAGU---AAC-GCGUAGG-U-A--UCU-AU-CCAUGGGU-GG--GGGAU-AA-CUCUG-G-GAAA-CUG-GAG-CUAAUACC-G-CAU-GA---C----------------ACC---------------------------------------------------------------------------------------------U-GAG------------------------------------------------------------------------------------GGU-----------------CAAA--GG-C---------------------GCGA-------------------G-UC-G--C----------CU----------GUGG---AGG-A-GCCUGCGU-UCG--A------UU-A-G-CU-A-G---UUGGCG-GG-G-UAAA-GG-CCCACCAA-GGCG-AUG-AUCGAUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGGC-GCAA-GCCUGAUCCAGCAAUGCCGCG-UGU-GU-GA-AGAA-GGUC--UU-CG-GA-UUGUAAA------------------------GCACUUUC-GA-CGGG-GAC-G------A--------------------------U-GA------------------------U-GA-CGGU-A-C-CC--G-UAG---------AA-GAAGC-CCC-GGCUAAC-UUCGU---GCCAGCAGCCG-CGGUAAU-AC-GAAG-GGGGCU-A-GCG-UUGCU-CGGAAUGACUGGGCGUAAAGGGCGCG-UAG-G-CGGUAU-GGACAG-UCAG-AUGUG-AAA-UU-CCUGGG-CUU-AA-CCUGGG-GGC-U-------------------------------------------GC-A-U----------------------------------------------UUGA-UAC-GUCCA-AAC-U-A-G-AG-UG-----UGAGAG-AGGGU-UGU-GGAAUU-CCC--------------------AGU-GUA-GAG-GUGAAA-UU-C-GUAGAU-AUUGGGAAG-AAC-A-CCGG--U-G-GCGAAGGCGG--CAACCUG------GCUCA--------------------------------------------------------------UAA-CU--GACG-----CUGA-GG--CGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCUGUAAACGAUG-UGUG-CUGGAUG-UUGGGUGA--C---UUA----------------------------------GU-CAUUCAG-UGUC-GUA-GUUAACGCGA-UAA-GCAC-ACCGCCUG-GGGAGUACGGCC-GCAA-GGUU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGCAG-AA-CCUUA-CCAGGGC-UUGACA-UG-------------GGGAGG------C-UG-U-A-UCCA-GAGA-U-GG-G-UAUU--UC-----CC-----------------------------------------GCAA----------------------------------------------------------------GG----GA---CC-UCCUG-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUCG-CC--UUUAG---U-U-GC-C-AG-CA--U-------------------------------GAUUGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUGGG-CACU-C-U-AAA-GGAAC-U-GCCG-GU-G-A-CAA-GCC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUAUG--UC-C-U-GGGCUACACACGUGCUACAAUGG-CGGUGA--C-AGU-GGGA-A-GC-C-A-G-GCAG-CG-AUGC-C-----------GA-G-CUGA-UCU-CA---AAAAGCC-GUC-UCAGUUCGGA-UUGCACUC-U-GCAACUC-GAGUGCA-UGAAGGUGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUUGGUUUGACCU-UAAG-CCGG-UGA-G-CG-AA-CCC---------------------------------GCA-A-------------------------------------GGGGCG-C-AGCCGA-CCACGGUCGGGUCAG-CG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCCUUU----------------------------------------------------------------------------------------
+>ZooRami4 Zoogloea ramigera
+----------------------------------------AGAGUUU-GAU-NNUGGCUCAGAUUGAAC-GC-UGGC-GGC-A-UG--C-CUUACACAU-GCAAGU-CGA-ACG--GCAG-CGC-------------------------------------------------GGG----------------------------------GCAA----------------------------------CCU--------------------------------------------------G-GCG--GC--GAG-UGG-C-GA--A-CGGGUGAGU---AAU-AUAUCGG-A-A--CGU-AC-CCUGGAGU-GG--GGGAU-AA-CGUAG-C-GAAA-GUU-ACG-CUAAUACC-G-CAU-AC---G----------------AUC---------------------------------------------------------------------------------------------U-AAG------------------------------------------------------------------------------------GAU-----------------GAAA--GU-G-GG-G-GA-U-C---------GCAA-----------GA---CCUC-AU-G--C----------UC----------CUGG---AGC-G-GCCGAUAU-CUG--A------UU-A-G-CU-A-G---UUGGUA-GG-G-UAAA-AG-CCUACCAA-GGCA-UCG-AUCAGUAGCUGGUCU-G-AG-------------A-GGAC-GACC-AGCCACACUGGAA-CUGA-GA-CACG-GUCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUUUUGGA--------------------CAAU-GGGC-GCAA-GCCUGAUCCAGCAAUGCCGCG-UGA-GU-GA-AGAA-GGCC--UU-CG-GG-UUGUAAA------------------------GCUCUUUU-GU-CAGG-GAA-G------AA-ACGG-GUUUUU-------C-----U-AA-UA----C---AG-AGAU-CUA-AU-GA-CGGU-A-C-CU--G-AAG---------AA-UAAGC-ACC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GGUGCA-A-GCG-UUAAU-CGGAAUUACUGGGCGUAAAGCGUGCG-CAG-G-CGGUUU-UGUAAG-ACUG-UCGUG-AAA-UC-CCCGGG-CUC-AA-CCUGGG-AAU-G-------------------------------------------GC-G-A----------------------------------------------UGGU-GAC-UGCAA-GGC-U-A-G-AG-UU-----UGGCAG-AGGGG-GGU-AGAAUU-CCA--------------------CGU-GUA-GCA-GUGAAA-UG-C-GUAGAU-AUGUGGAGG-AAC-A-CCGA--U-G-GCGAAGGCAG--CCCCCUG------GGUCA--------------------------------------------------------------AAA-CU--GACG-----CUCA-UG--CACGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCCUAAACGAUG-UCUA-CUAGUUG-UCGGGUUU------UAAU----------------------------------U-AACUUGG-UAAC-GCA-GCUAACGCGU-GAA-GUAG-ACCGCCUG-GGGAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGA-CCC--GC-A--CA-A-GCG-GUGGAU-GA-UGUGGA-UUAAUUC-G-AUGCAACG-CGAAA-AA-CCUUA-CCUACCC-UUGACA-UG--------------GCAGA------A-AU-C-C-UCGA-GAGA-U-UG-A-GGAG--UGC----UC-----------------------------------------GAAA----------------------------------------------------------------GA---GAA---UC-UGC-A-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-UC--AUUAG---U-U-GC-U-A--C------------------------------------GAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAG-CACU-C-U-AAU-GAGAC-U-GCCG-GU-G-A-CAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUAUG--GG-U-A-GGGCUUCACACGUCAUACAAUGG-UACAUA--C-AGA-GGGC-C-GC-C-A-A-CCCG-CG-AGGG-G-----------GA-G-CUAA-UCC-CA-G-AAAGUGU-AUC-GUAGUCCGGA-UUGUAGUC-U-GCAACUC-GACUGCA-UGAAGUUGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GUCGCGGUG-AAU-ACGUU-CCCGGGUCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GCGGGUUUUACCA-GAAG-UAGG-UAG-C-UU-CA-CC----------------------------------GCA-A--------------------------------------GGAGG-G-CGCUUA-CCACGGUAGGAUUCG-UG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAUCGGAAGGUG-CGGC-UGGAUCACCUCCUU-----------------------------------------------------------------------------------------
+>CowRumi2 Cowdria ruminantium
+-----------CAUAAGUAAUUAUGGUUUUGUCAAACUUGAGAGUUU-GAU-CCUGGCUCAGAACGAAC-GC-UGGC-GGC-A-AG--C-UUAACACAU-GCAAGU-CGA-ACGG-AC---AGU-----------UAU-------------------------------UUAUAGC----------------------------------UUCG----------------------------------GCUAUGAGUA---------------------------------------------UCU--GU--UAG-UGG-C-AG--A-CGGGUGAGU---AAU-GCGUAGG-A-A--UCU-GC-CUAGUAGU-AU--GGAAU-AG-CUAUU-A-GAAA-UGA-UAG-GUAAUACU-G-UAU-AA---U----------------CCC---------------------------------------------------------------------------------------------U-GCG------------------------------------------------------------------------------------GGG-----------------GAAA--GA-----------------------UUUA---------------------UC-G--C----------UA----------UUAG---AUG-A-GCCUACGU-UAG--A------UU-A-G-CU-A-G---UUGGUA-AG-G-UAAU-GG-CUUACCAA-GGCA-AUG-AUCUAUAGCUGGUCU-G-AG-------------A-GGAC-GAUC-AGCCACACUGGAA-CUGA-GA-UACG-GUCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGGC-GAAA-GCCUGAUCCAGCUAUGCCGCG-UGA-GU-GA-AGAA-GGCC--UU-CG-GG-UUGUAAA------------------------ACUCUUUU-AA-UAGG-GAA-G------A--------------------------U-AA------------------------U-GA-CGGU-A-C-CU--A-UAG---------AA-AAAGU-CCC-GGCAAAC-UCCGU---GCCAGCAGCCG-CGGUAAU-AC-GGAG-GGGGCA-A-GCG-UUGUU-CGGAAUUAUUGGGCGUAAAGGGCACG-UAG-G-UGGACU-AGUAAG-UUAA-AAGUG-AAA-UA-CCAAAG-CUC-AA-CUUUGG-AGC-U-------------------------------------------GC-U-U----------------------------------------------UUAA-UAC-UGCUA-GAC-U-A-G-AG-GU-----CGAGAG-AGGAU-AGC-GGAAUU-CCU--------------------AGU-GUA-GAG-GUGAAA-UU-C-GUAGAU-AUUAGGAGG-AAC-A-CCGG--U-G-GCGAAGGCGG--CUAUCUG------GCUCG--------------------------------------------------------------AUA-CU--GACA-----CUGA-GG--UGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCUGUAAACGAUG-AGUG-CUAAAUG-UGAGGAU-------UUU-------------------------------------AUCUUUG-UAUU-GUA-GCUAACGCGU-UAA-GCAC-UCCGCCUG-GGGACUACGGUC-GCAA-GACU-AAA-ACUC-AAA-GGAAUUG-ACGGGGA-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AUGCAACG-CGAAA-AA-CCUUA-CCACUUU-UUGACA-UG-------------AAGGUC----G-U-AU-C-C-CUUU-UAAC-C-GA-G-GGAG--UC-----AG-----------------------------------------UUCGG---------------------------------------------------------------CU----G----GA-CCUUA-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUCA-UC--CUUAG---U-U-AC-C-AA-CA--G-------------------------------GUAAUG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CUGGG-CACU-C-U-AAG-GAAAC-U-GCCA-GU-G-A-UAA-ACU-G--GAGG-A-AGG-U-GGGG-AUGAUGUC--AAGUCAGCAC-G-GC-CCUUAUA--GG-G-U-GGGCUACACACGUGCUACAAUGG-CAACUA--C-AAU-AGGU-U-GC-G-A-G-ACCG-CG-AGGU-U-----------UA-G-CUAA-UCC-AA---AAAAGUU-GUC-UCAGUUCGGA-UUGUUCUC-U-GCAACUC-GAGAGCA-UGAAGUCGGAAU-CGCUAGUA-AUCGU-GGA-UC-AU-CAU-GCCACGGUG-AAU-ACGUU-CUCGGGUCUUGUA----CACACUGCCCGUC-ACG--CCAUGGGA-AUUGGCUUAACUC-GAAG-CUGG-UGU-G-CU-AA-CC----------------------------------GUA-A--------------------------------------GGAAG-C-AGCCAU-UUAAGGUUGGGUUAG-UG-ACU-AGGGUG-AAGUCGUAACAAGGUAGCUGUAGGUGAACCUG-CGGC-UGGAUUACCUCCUUUU---------------------------------------------------------------------------------------
+>RhiTropi Rhizobium tropici 5
+-------------------------------------------GUUU-GAU-CCUGGCUCAGAACGAAC-GC-UGGC-GGC-A-GG--C-UUAACACAU-GCAAGU-CGA-GCGC-CC---------------------------------------------------------C----------------------------------GCAAGG-------------------------------------------------------------------------------------------------AG-CGG-C-AG--A-CGGGUGAGU---AAC-GCGUGGG-A-A--UCU-AC-CUUUUGCU-AC--GGAAU-AA-CGCAG-G-GAAA-CUU-AUG-CUAAUACC-G-UAU-GU---G----------------UCC---------------------------------------------------------------------------------------------U-UCG------------------------------------------------------------------------------------GGA-----------------GAAA--GA-----------------------UUUA---------------------UC-G--G----------CA----------AGAG---AUG-A-GCCCGCGU-UGG--A------UU-A-G-CU-A-G---UUGGUG-GG-G-UAAA-GG-CCUACCAA-GGCG-ACG-AUCCAUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACAUUGGGA-CUGA-GA-CACG-GCCCAAA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGGC-GCAA-GCCUGAUCCAGCCAUGCCGCG-UGA-GU-GA-UGAA-GGCC--CU-AG-GG-UUGUAAA------------------------GCUCUUUC-AC-CGGA-GAA-G------A--------------------------U-AA------------------------U-GA-CGGU-A-U-CC--G-GAG---------AA-GAAGC-CCC-GGCUAAC-UUCGU---GCCAGCAGCCG-CGGUAAU-AC-GAAG-GGGGCU-A-GCG-UUGUU-CGGAAUUACUGGGCGUAAAGCGCACG-UAG-G-CCGAUC-GAUCAG-UCAG-GGGUG-AAA-UC-CCAGGG-CUC-AA-CCCUGG-AAC-U-------------------------------------------GC-C-U----------------------------------------------UUGA-UAC-UGUCG-AUC-U-G-G-AG-UA-----UGGAAG-AGGUG-AGU-GGAAUU-CCG--------------------AGU-UUA-GAG-GUGAAA-UU-C-GUAGAU-AUUCGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGG--CUCACUG------GUCCA--------------------------------------------------------------UUA-CU--GACG-----CUGA-GG--UGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AAUG-UUAGCCG-UCGGGCAG------UAUA----------------------------------C-UGUUCGG-UGGC-GCA-CGUAACGCAU-UAA-ACAU-UCCGCCUG-GGGAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGCAG-AA-CCUUA-CCAGCCC-UUGACA-UC-------------CUGUGU--------UA-C-C-UCUA-GAGA-U-AG-G-GGGU--CC-----AC-----------------------------------------UUCG----------------------------------------------------------------GU----G----GC-GCAGA-GA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUCG-CC--CUUAG---U-U-GC-C-AG-CA--U--------------------------------UCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AAG-GGGAC-U-GCCG-GU-G-A-UAA-GCC-GA-GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUACG--GG-C-U-GGGCUACACACGUGCUACAAUGG-UGGUGA--C-AGU-GGGC-A-GC-G-A-G-CACG-CG-AGUG-U-----------GA-G-CUAA-UCU-CC---AAAAGCC-AUC-UCAGUUCGGA-UUGCACUC-U-GCAACUC-GAGUGCA-UGAAGUUGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUUGGUUUUACCC-GAAG-GUAG-UGC-G-CU-AA-CC----------------------------------GCA-A--------------------------------------GGAGG-C-AGCUAA-CCACGGUAGGGUCAG-CG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCU---------------------------------------------------------------------------------------------
+>DusMobil Desulfurococcus mobilis 2
+--------------------------------------ACUCCGGUU-GAU-CCUGCCGGUCCCG-ACC-GC-UAUC-GGG-GUGG--GGCUAAGCCAU-GGGAGU-CGC-ACGC-UC-------------------------------------------------------CGC----------------------------------CGCU----------------------------------GCG---------------------------------------------------------GG--GCG-UGG-C-GG--A-CGGCUGAGU---AAC-ACGUGGC-UAA--CCU-AC-CCUCGGGA-GG--GGGAU-AA-CACCG-G-GAAA-CUG-GUG-CUAAUCCC-C-CAU-A------G-GGG-A--G-GA--GGC-------------------------------------------------------------------------------------------CUG-GAAG-----------------------------------------------------------------------------------GGU--U-C--C--UC-CCC-GAAA-GGG-U-GU-G----G-CAG-GG----GUUA----ACGCU--GC---UACA-CC-G--C----------CC----------GAGG---AUG-G-GGCUACGG-CCC--A------UU-A-G-GU-U-G---UUGGCG-GG-G-UAAC-GG-CCCGCCAA-GCCG-AUA-AUGGGUAGGGGCCGU-G-AG-------------A-GCGG-GAGC-CCCCAGAUGGGCA-CUGA-GA-CAAG-GGCCCAG-GCC-C-UACG--GGGC-GC-A-CC-A-G-GCGCG-AAACCUCCG--------------------CAAU-GCGG-GAAA-CCGUGACGGGGCCACCCCGAG-UGC-CC-C-----C-------UU-AC------G--G-------------------------GGGCUUUU-CC-CCGC-U-------------------------------G-----U-AG-GA----A--------------------------G-G-CG--G-GGG---------AA-UAAGC-GGGGGGCAAGU-CUGGU---GUCAGCCGCCG-CGGUAAU-AC-CAG-CCCCGCG-A-GUG-GUCGG-GACGAUUAUUGGGCCUAAAGCGCCCG-UAG-C-CGGCCC-GGCAAG-UCCC-CUCCU-AAA-UU-CCCGGG-CUC-AA-CCCGGG-GAC-U-------------------------------------------GG-A-G----------------------------------------------GGGA-UAC-UGCCG-GGC-U-A-G-GG-GG-----UGGGAG-AGGCC-GAG-GGUACU-CCC--------------------GGG-GUA-GGG-GCGAAA-UC-C-UAUAAU-CCCGGGAGG-ACC-A-CCAG--U-G-GCGAAGGCGC--UCGGCUG------GAACA--------------------------------------------------------------CGC-CC--GACGG-----UGA-GG--GGCGAAA-G-C-CGGGG-GAGC-GAACCGG-AUUAGAUAC-----CCGGGUAG-UCCCG-GCUGUAAACGAUG-CGGG-CUAGGUG-UUGGGUGG--GC-UUAGA--------------------------------GCC-CACCCAG-UGCC-GCA-GGGAAGCCGU-UAA-GCCC-GCCGCCUG-GGGAGUACGGCC-GCAA-GGCU-GAA-ACUC-AAA-GGAAUUG-GCGGGGG-AGC--ACCA--CA-A-GGG-GUGGAG-CC-UGCGGU-UCAAUUG-G-AGUCAACG-CCGGG-AA-UCUCA-CCGGGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACAGC-AGGAUGACGGCCAGGUUAAAGGCCUUGCC-UGA-CGCGCUGAGAGGA-GGUGCAUGGCCGUCGCCA-GCUCGUGCU-GUGA-AGUGU-CCGG-UUAA-GU-CCGGAAAC-GAGCGAGACC-CCCA-CC--CCUAG---U-U-GC-U-AC-CC--G--GGGC--------------------------UACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCU---C-CGGGG-CACA-C-U-AGG-GGGAC-U-GCCG-CC-G-UUUAA-GGC-G--GAGG-A-AGG-A-GGGG-GCCACGGC--AGGUCAGCAU-G-CC-CCGAACC--CC-C-C-GGGCUACACGCGGGCUACAAUGG-CGGGGA--C-AGC-GGGA-U-CC-G-A-C-CCCG-AA-AGGG-G-----------GA-G-GCAA-UCC-CU-C-AAACCCC-GCC-GUGGUUGGGA-UCGAGGGC-U-GCAACUC-GCCCUCG-UGAACGAGGAAU-CCCUAGUA-ACCGC-GCG-UC-AAC-AU-CGCGCGGUG-AAU-ACGUC-CCUGCUCCUUGCA----CACACCGCCCGUC-GCU--CCACCCGA-GGGGAGGGGGAGU-GA-G-GCCC-G-G-C-CC----------------------------------------CUU-------------------------------------------GG-G-UCGGGU-CGAACUCCCCCUCCC-UG-AGG-GGGGAG-AAGUCGUAACAAGGUAGCCGUACCGGAAGGUG-CGGC-UGGAUCACCUCCU------------------------------------------------------------------------------------------
+>AgrTume3 Agrobacterium tumefaciens 7
+-------------------------------------------GUUU-GAU-CCUGGCUCAGAACGAAC-GC-UGGC-GGC-A-GG--C-UUAACACAU-GCAAGU-CGA-ACGC-CC---------------------------------------------------------C----------------------------------GCAA----------------------------------G-----------------------------------------------------------GG--GAG-UGG-C-AG--A-CGGGUGAGU---AAC-GCGUGGG-A-A--UCU-AC-CCAUCUCU-GC--GGAAU-AG-CUCUG-G-GAAA-CUG-GAA-UUAAUACC-G-CAU-AC---G----------------CCC---------------------------------------------------------------------------------------------U-ACG------------------------------------------------------------------------------------GGG-----------------GAAA--GA-----------------------UUUA---------------------UC-G--G----------GG----------AUGG---AUG-A-GCCCGCGU-UGG--A------UU-A-G-CU-A-G---UUGGUG-GG-G-UAAA-GG-CCUACCAA-GGCG-ACG-AUCCAUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACAUUGGGA-CUGA-GA-CACG-GCCCAAA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGGC-GCAA-GCCUGAUCCAGCCAUGCCGCG-UGA-GU-GA-UGAA-GGCC--UU-AG-GG-UUGUAAA------------------------GCUCUUUC-AC-CGGU-GAA-G------A--------------------------U-AA------------------------U-GA-CGGU-A-A-CC--G-GAG---------AA-GAAGC-CCC-GGCUAAC-UUCGU---GCCAGCAGCCG-CGGUAAU-AC-GAAG-GGGGCU-A-GCG-UUGUU-CGGAAUUACUGGGCGUAAAGCGCACG-UAG-G-CGGAUA-UUUAAG-UCAG-GGGUG-AAA-UC-CCAGAG-CUC-AA-CUCUGG-AAC-U-------------------------------------------GC-C-U----------------------------------------------UUGA-UAC-UGGGU-AUC-U-U-G-AG-UA-----UGGAAG-AGGUA-AGU-GGAAUU-GCG--------------------AGU-GUA-GAG-GUGAAA-UU-C-GUAGAU-AUUCGCAGG-AAC-A-CCAG--U-G-GCGAAGGCGG--CUUACUG------GUCCA--------------------------------------------------------------UUA-CU--GACG-----CUGA-GG--UGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AAUG-UUAGCCG-UCGGGCAG------UCUA----------------------------------C-UGUUCGG-UGGC-GCA-CGUAACGCAU-UAA-ACAU-UCCGCCUG-GGGAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGCAG-AA-CCUUA-CCAGCUC-UUGACA-UU------------C-GGGGU------U-UG-G-GCAGUG-GAGA-C-AU-UGUCCU-UCA-----G------------------------------------------UUAG----------------------------------------------------------------GC----UG---GC-CCCAG-AA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUCG-CC--CUUAG---U-U-GC-C-AG-CA--U--------------------------------UUGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AAG-GGGAC-U-GCCG-GU-G-A-UAA-GCC-GA-GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUACG--GG-C-U-GGGCUACACACGUGCUACAAUGG-UGGUGA--C-AGU-GGGC-A-GC-G-A-G-ACAG-CG-AUGU-C-----------GA-G-CUAA-UCU-CC---AAAAGCC-AUC-UCAGUUCGGA-UUGCACUC-U-GCAACUC-GAGUGCA-UGAAGUUGGAAU-CGCUAGUA-AUCGC-AGA-UC-AG-CAU-GCUGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUUGGUUUUACCC-GAAG-GCGC-UGC-G-CU-AA-CC----------------------------------GCA-A--------------------------------------GGGGG-C-AGGCGA-CCACGGUAGGGUCAG-CG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCC-------------------------------------------------------------------------------------------
+>RhiLoti2 Rhizobium loti 3
+----------------------------------AACUUGAGAGUUU-GAU-CCUGGCUCAGAACGAAC-GC-UGGC-GGC-A-GG--C-UUAACACAU-GCAAGU-CGA-GCGC-CU---------------------------------------------------------C----------------------------------GCAA--------------------------------------------------------------------------------------------------GAG-CGG-C-AG--A-CGGGUGAGU---AAC-GCGUGGG-A-A--UCU-AC-CCAUCUCU-AC--GGAAC-AA-CUCCG-G-GAAA-CUG-GAG-CUAAUACC-G-UAU-AC---G----------------UC----------------------------------------------------------------------------------------------U-UCG------------------------------------------------------------------------------------GGA-----------------GAAA--GA-----------------------UUUA---------------------UC-G--G----------AG----------AUGG---AUG-A-GCCCGCGU-UGG--A------UU-A-G-CU-A-G---UUGGUG-GG-G-UAAU-GG-CCUACCAA-GGCG-ACG-AUCCAUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACAUUGGGA-CUGA-GA-CACG-GCCCAAA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGGC-GAAA-GCCUGAUCCAGCCAUGCCGCG-UGA-GU-GA-UGAA-GGCC--CU-AG-GG-UUGUAAA------------------------GCUCUUUC-AA-CGGU-GAA-G------A--------------------------U-AA------------------------U-GA-CGGU-A-A-CC--G-UAG---------AA-GAAGC-CCC-GGCUAAC-UUCGU---GCCAGCAGCCG-CGGUAAU-AC-GAAG-GGGGCU-A-GCG-UUGUU-CGGAAUUACUGGGCGUAAAGCGCACG-UAG-G-CGGAUU-GUUAAG-UUAG-GGGUG-AAA-UC-CCAGGG-CUC-AA-CCCUGG-AAC-U-------------------------------------------GC-C-U----------------------------------------------UUAA-UAC-UGGCA-AUC-U-C-G-AG-UC-----CGAGAG-AGGUG-AGU-GGAAUU-CCG--------------------AGU-GUA-GAG-GUGAAA-UU-C-GUAGAU-AUUCGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGG--CUCACUG------GCUCG--------------------------------------------------------------GUA-CU--GACG-----CUGA-GG--UGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AGAG-CUAGCCG-UCGGCAAG------UUUA----------------------------------C-UUGUCGG-UGGC-GCA-CGUAACGCAU-UAA-GCUC-UCCGCCUG-GGGAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGCAG-AA-CCUUA-CCAGCCC-UUGACA-UC-------------CCGGUC------G-CG-G-UUUCCA-GAGA-U-GG-AUACCU--UC-----AG-----------------------------------------UUCGG---------------------------------------------------------------CU----G----GA-CCGGU-GA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUCG-CC--CUUAG---U-U-GC-C-AG-CA--U--------------------------------UCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AAG-GGGAC-U-GCCG-GU-G-A-UAA-GCC-GA-GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUACG--GG-C-U-GGGCUACACACGUGCUACAAUGG-UGGUGA--C-AGU-GGGC-A-GC-G-A-G-ACCG-CG-AGGU-C-----------GA-G-CUAA-UCU-CC---AAAAGCC-AUC-UCAGUUCGGA-UUGCACUC-U-GCAACUC-GAGUGCA-UGAAGUUGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUUGGUUUUACCC-GAAG-GCGC-UGU-G-CU-AA-CC----------------------------------GCA-A--------------------------------------GGAGG-C-AGGCGA-CCACGGUAGGGUCAG-CG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCC-------------------------------------------------------------------------------------------
+>RhiSpeci Rhizobium sp. 4
+----------------------------------AACUUGAGAGUUU-GAU-CCUGGCUCAGAACGAAC-GC-UGGC-GGC-A-GG--C-UUAACACAU-GCAAGU-CGA-GCGC-CC---------------------------------------------------------C----------------------------------GCAA----------------------------------G-----------------------------------------------------------GG--GAG-CGG-C-AG--A-CGGGUGAGU---AAC-GCGUGGG-A-A--UCU-AC-CCAUCCCU-AC--GGAAC-AA-CUCCG-G-GAAA-CUG-GAG-CUAAUACC-G-UAU-AC---G----------------CCC---------------------------------------------------------------------------------------------U-UCG------------------------------------------------------------------------------------GGG-----------------GAAA--GA-----------------------UUUA---------------------UC-G--G----------GG----------AUGG---AUG-A-GCCCGCGU-UGG--A------UU-A-G-CU-A-G---UUGGUG-GG-G-UAAA-GG-CCUACCAA-GGCG-ACG-AUCCAUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACAUUGGGA-CUGA-GA-CACG-GCCCAAA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGGC-GCAA-GCCUGAUCCAGCCAUGCCGCG-UGA-GU-GA-UGAA-GGCC--UU-AG-GG-UUGUAAA------------------------GCUCUUUC-AC-CGGA-GAA-G------A--------------------------U-AA------------------------U-GA-CGGU-A-U-CC--G-GAG---------AA-GAAGC-CCC-GGCUAAC-UUCGU---GCCAGCAGCCG-CGGUAAU-AC-GAAG-GGGGCU-A-GCG-UUGUU-CGGAAUUACUGGGCGUAAAGCGCACG-UAG-G-CGGAUA-UUUAAG-UCAG-GGGUG-AAA-UC-CCAGAG-CUC-AA-CUCUGG-AAC-U-------------------------------------------GC-C-U----------------------------------------------UUGA-UAC-UGGGU-AUC-U-U-G-AG-UA-----UGGAAG-AGGUA-AGU-GGAAUU-GCG--------------------AGU-GUA-GAG-GUGAAA-UU-C-GUAGAU-AUUCGCAGG-AAC-A-CCAG--U-G-GCGAAGGCGG--CUUACUG------GUCCA--------------------------------------------------------------UUA-CU--GACG-----CUGA-GG--UGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AAUG-UUAGCCG-UCGGCAAG------UUUA----------------------------------C-UUGUCGG-UGGC-GCA-CGUAACGCAU-UAA-ACAU-UCCGCCUG-GGGAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGCAG-AA-CCUUA-CCAGCCC-UUGACA-UG--------------CCCGG------C-CA-G-C-CACA-GAGA-U-GU-G-GNN----------UU-----------------------------------------UUCGG---------------------------------------------------------------GG-----A---CC-GGG-U-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUCG-CC--CUUAG---U-U-GC-C-AG-CA--U--------------------------------UCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AAG-GGGAC-U-GCCG-GU-G-A-UAA-GCC-GA-GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUACG--GG-C-U-GGGCUACACACGUGCUACAAUGG-UGGUGA--C-AGU-GGGC-A-GC-G-A-A-GGAG-CG-AUCC-C-----------GA-G-CUAA-UCU-CC---AAAAGCC-AUC-UCAGUUCGGA-UUGCACUC-U-GCAACUC-GAGUGCA-UGAAGUUGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAC-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUUGGUUUUACCC-GAAG-GUAG-UGC-G-CU-AA-CC----------------------------------GCA-A--------------------------------------GGAGG-C-AGCUAA-CCACGGUAGGGUCAG-CG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCC-------------------------------------------------------------------------------------------
+>AgrTume4 Agrobacterium tumefaciens 3
+-------------------------------CUCAACUUGAGAGUUU-GAU-CCUGGCUCAGAACGAAC-GC-UGGC-GGC-A-GG--C-UUAACACAU-GCAAGU-CGA-ACGC-CC---------------------------------------------------------C----------------------------------GCAA----------------------------------G-----------------------------------------------------------GG--GAG-UGG-C-AG--A-CGGGUGAGU---AAC-GCGUGGG-A-A--UCU-AC-CGUGCCCU-GC--GGAAU-AG-CUCCG-G-GAAA-CUG-GAA-UUAAUACC-G-CAU-AC---G----------------CCC---------------------------------------------------------------------------------------------U-ACG------------------------------------------------------------------------------------GGG-----------------GAAA--GA-----------------------UUUA---------------------UC-G--G----------GG----------UAUG---AUG-A-GCCCGCGU-UGG--A------UU-A-G-CU-A-G---UUGGUG-GG-G-UAAA-GG-CCUACCAA-GGCG-ACG-AUCCAUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACAUUGGGA-CUGA-GA-CACG-GCCCAAA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGGC-GCAA-GCCUGAUCCAGCCAUGCCGCG-UGA-GU-GA-UGAA-GGCC--UU-AG-GG-UUGUAAA------------------------GCUCUUUC-AC-CGGA-GAA-G------A--------------------------U-AA------------------------U-GA-CGGU-A-U-CC--G-GAG---------AA-GAAGC-CCC-GGCUAAC-UUCGU---GCCAGCAGCCG-CGGUAAU-AC-GAAG-GGGGCU-A-GCG-UUGUU-CGGAAUUACUGGGCGUAAAGCGCACG-UAG-G-CGGAUA-UUUAAG-UCAG-GGGUG-AAA-UC-CCAGAG-CUC-AA-CUCUGG-AAC-U-------------------------------------------GC-C-U----------------------------------------------UUGA-UAC-UGGGU-AUC-U-U-G-AG-UA-----UGGAAG-AGGUA-AGU-GGAAUU-CCG--------------------AGU-GUA-GAG-GUGAAA-UU-C-GUAGAU-AUUCGGAGG-AAC-G-CCAG--U-G-GCGAAGGCGG--CUUACUG------GUCCA--------------------------------------------------------------UUA-CU--GACG-----CUGA-GG--UGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AAUG-UUAGCCG-UCGGGCAG------UAUA----------------------------------C-UGUUCGG-UGGC-GCA-GCUAACGCAU-UAA-ACAU-UCCGCCUG-GGGAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-gUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACg-CGCAG-AA-CCUUA-CCAGCUC-UUGACA-UU------------C-GGGgU------U-UG-G-GCAgUG-GAGA-C-AU-UGUCCU-UCA-----GU------------------------------------------UAG----------------------------------------------------------------GC----UG---GC-CCCAG-AA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUCG-CC--CUUAG---U-U-GC-C-AG-CA--U--------------------------------UUAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AAG-GGGAC-U-GCCG-GU-G-A-UAA-GCC-GA-GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUACG--GG-C-U-GGGCUACACACGUGCUACAAUGG-UGGUGA--C-AGU-GGGC-A-GC-G-A-G-ACAG-CG-AUGU-C-----------GA-G-CUAA-UCU-CC---AAAAGCC-AUC-UCAGUUCGGA-UUGCACUC-U-GCAACUC-GAGUGCA-UGAAGUUGGAAU-CGCUAGUA-AUCGC-AGA-UC-AG-CAU-GCUGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUUGGUUUUACCC-GAAG-GUAG-UGC-G-CU-AA-CC----------------------------------GCA-A--------------------------------------GGAGG-C-AGCUAA-CCACGGUAGGGUCAG-CG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCCUUUCU--------------------------------------------------------------------------------------
+>ChyPneu2 Chlamydia pneumoniae
+---------------------------------UUUUCUGAGAAUUU-GAU-CUUAGUUCAGAUUGAAC-GC-UGGC-GGC-G-UG--G-AUGAGGCAU-GCAAGU-CGA-ACGG-AA---UAA------------------------------------------------UGAC----------------------------------UUCG----------------------------------GUUG---------------------------------------------------UUA--UU--UAG-UGG-C-GG--A-AGGGUUAGU---AGU-ACAUAGA-UAA--UCU-GC-CCUCAACU-UG--GGGAU-AA-CGGUU-G-GAAA-CGA-UCG-CUAAUACC-G-AAU-GU---A-G-UGU-A--A-U---UAG---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------CUA----A--U-AUA-UAU-UAAA--GA-A-GG-G-GA-U-C---------UUCG-----------GA---CCUU-UC-G--G----------UU----------GAGG---AAG-A-GUUUAUGC-GAU--A------UC-A-G-CU-U-G---UUGGUG-GG-G-UAAA-AG-CCCACCAA-GGCG-AUG-ACGUCUAGGCGGAUU-G-AG-------------A-GAUU-GACC-GCCAACACUGGGA-CUGA-GA-CACU-GCCCAGA-CUC-C-UACG--GGAG-GC-U-GC-A-G-UCGAG-AAUCUUUCG--------------------CAAU-GGAC-GAAA-GUCUGACGAAGCGACGCCGCG-UGU-GU-GA-UGAA-GGCC--UU-AG-GG-UUGUAAA------------------------GCACUUUC-GC-CUGG-GAA-U------AA-GAGA-GAUUGG-------C-----U-AA-UA----U---CC-AAUC-GAU-UU-GA-GCGU-A-C-CA--G-GUA---------AA-GAAGC-ACC-GGCUAAC-UCCGU---GCCAGCAGCUG-CGGUAAU-AC-GGAG-GGUGCU-A-GCG-UUAAU-CGGAUUUAUUGGGCGUAAAGGGCGUG-UAG-G-CGGAAA-GGAAAG-UUAG-AUGUU-AAA-UU-UUGGGG-CUC-AA-CCCCAA-GUC-A-------------------------------------------GC-A-U----------------------------------------------UUAA-AAC-UAUCU-UUC-U-A-G-AG-GA-----UAGAUG-GGGAA-AAG-GGAAUU-CCA--------------------CGU-GUA-GCG-GUGAAA-UG-C-GUAGAU-AUGUGGAAG-AAC-A-CCAG--U-G-GCGAAGGCGC--UUUUCUA------AUUUA--------------------------------------------------------------UAC-CU--GACG-----CUAA-GG--CGCGAAA-G-C-AAGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCUU-GCCGUAAACGAUG-CAUA-CUUGAUG-UGGAUGG------UCUCA-ACC--------------------------------CCAUCCG-UGUC-GGA-GCUAACGUGU-UAA-GUAU-GCCGCCUG-AGGAGUACACUC-GCAA-GGGU-GAA-ACUC-AAA-AGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCA-GUGGAG-CA-UGUGGU-UUAAUUC-G-AUGCAACG-CGAAG-GA-CCUUA-CCUGGAC-UUGACA-UG------------U-AUUUG------A-CA-A-C-UGUA-GAAA-U-AC-A-GCUU--U------CC-----------------------------------------GCAA----------------------------------------------------------------GG-----A---CA-GAU-A-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGCC-GUGA-GGUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUA-UC--GUUAG---U-U-GC-C-AG-CA--C--U-----------------------------U-AG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-GUGGG-AACU-C-U-AAC-GAGAC-U-GCCU-GG-G-U-UAA-CCA-G--GAGG-A-AGG-C-GAGG-AUGACGUC--AAGUCAGCAU-G-GC-CCUUAUG--UC-C-A-GGGCGACACACGUGCUACAAUGG-UUAGUA--C-AGA-AGGU-A-GC-A-A-G-AUCG-UG-AGAU-G-----------GA-G-CAAA-UCC-UA---AAAGCUA-GCC-CCAGUUCGGA-UUGUAGUC-U-GCAACUC-GACUACA-UGAAGUCGGAAU-UGCUAGUA-AUGGC-GUG-UC-AGCCAU-AACGCCGUG-AAU-ACGUU-CUCGGGCCUUGUA----CACACCGCCCGUC-ACA--UCAUGGGA-GUUGGUUUUACCU-UAAG-UCGU-UGA-C-UC-AA-CCUA--------------------------------UUU-A------------------------------------UAGGAGA-G-AGGCGC-CCAAGGUGAGGCUGA-UG-ACU-GGGAUG-AAGUCGUAACAAGGUAGCCCUACCGGAAGGUG-GGGC-UGGAUCACCUCCUUU----------------------------------------------------------------------------------------
+>LepBorgp Leptospira borgpetersenii
+---------------------------------AACACGGAGAGUUU-GAU-CCUGGCUCAGAACUAAC-GC-UGGC-GGC-G-CG--U-CUUAAACAU-GCAAGU-CAA-GCGG-AG--------------------------------------------------------UA----------------------------------GCAA----------------------------------UA----------------------------------------------------------CU--CAG-CGG-C-GA--A-CGGGUGAGU---AAC-ACGUGGG-UAA--UCU-UC-CUCUGAGU-CU--GGGAU-AA-CUUUC-C-GAAA-GGG-AAG-CUAAUACU-G-GAU-GG---U-C-CCG-A--G-AG--AUC---------------------------------------------------------------------------------------------A-CAA------------------------------------------------------------------------------------GAU--U-U--U--UC-GGG-UAAA--GA-----------------------UUUA---------------------UU-G--C----------UC----------GGAG---AUG-A-GCCCGCGU-CCG--A------UU-A-G-CU-A-G---UUGGUG-AG-G-UAAA-GG-CUCACCAA-GGCG-ACG-AUCGGUAGCCGGCCU-G-AG-------------A-GGGU-GUUC-GGCCACAAUGGAA-CUGA-GA-CACG-GUCCAUA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UUAAG-AAUCUUGCU--------------------CAAU-GGGG-GGAA--CCUGAAGCAGCGACGCCGCG-UGA-AC-GA-UGAA-GGUC--UU-CG-GA-UUGUAAA------------------------GUUCAGUA-AG-CAGG-GAA-A--A---AU-AAGC-A------------------G-CA-A---------------U-GUG-AU-GA-UGGU-A-C-CU--G-CCU---------AA-A--GC-ACC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAU-GGUGCA-A-GCG-UUGUU-CGGAAUCAUUGGGCGUAAAGGGUGCG-UAG-G-CGGACA-UGUAAG-UCAG-GUGUG-AAA-AC-UGCGGG-CUC-AA-CUCGCA-GCC-U-------------------------------------------GC-A-C----------------------------------------------UUGA-AAC-UAUGU-GUC-U-G-G-AG-UU-----UGGGAG-AGGCA-AGU-GGAAUU-CCA--------------------GGU-GUA-GCG-GUGAAA-UG-C-GUAGAU-AUCUGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGA--CUUGCUG------GCCUA--------------------------------------------------------------AAA-CU--GACG-----CUGA-GG--CACGAAA-G-C-GUGGG-UAGU-GAACGGG-AUUAGAUAC-----CCCGGUAA-UCCAC-GCCCUAAACGUUG-UCUA-CCAGUUG-UUGGGGGU------UUUA----------------------------------A-CCCUCAG-UAAC-GAA-CCUAACGGAU-UAA-GUAG-ACCGCCUG-GGGACUAUGCUC-GCAA-GAGU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-UCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AUGAUACG-CGAAA-AA-CCUCA-CCUAGGC-UUGACA-UG------------G-AGUGG------A-AU-C-A-UGUA-GAGA-U-AC-A-UGAG---------CC-----------------------------------------UUCG----------------------------------------------------------------GG---------CC-GCU-U-CA--------------------------------------------------CAGGU-GCUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUCA-CC--UUAUG---U-U-GC-C-AU-CA--U--------------------------------UCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-G-UAA-GGAAC-U-GCCG-GU-G-A-CAA-ACC-G--GAGG-A-AGG-C-GGGG-AUGACGUC--AAAUCCUCAU-G-GC-CUUUAUG--UC-U-A-GGGCAACACACGUGCUACAAUGG-CCGGUA--C-AAA-GGGU-A-GC-C-A-A-CUCG-CG-AGGG-G-----------GA-G-CUAA-UCU-CA-A-AAAUCCG-GUC-CCAGUUCGGA-UUGGAGUC-U-GCAACUC-GACUCCA-UGAAGUCGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGACCUUGUA----CACACCGCCCGUC-ACA--CCACCUGA-GUGGGGAGCACCC-GAAG-UGGUCUUU-G-CC-AA-CC----------------------------------GCA-A--------------------------------------GGAAG-C-AGACUA-CUAAGGUGAAACUCG-UG-AAG-GGGGUG-AAGUCGUAACAAGGUAGCCGUAUCGGAAGGUG-CGGC-UGGAUCACCUCCUUU----------------------------------------------------------------------------------------
+>AcbAceti Acetobacter aceti
+-----------------------------------------GAGUUU-GAU-UCUGGCUCAGAGCGAAC-GC-UGGC-GGC-A-UG--C-UUAACACAU-GCAAGU-CGC-ACGA-AG--------------------------------------------------------GC----------------------------------UUCG----------------------------------GC----------------------------------------------------------CU--UAG-UGG-C-GG--A-CGGGUGAGU---AAC-GCGUAGG-A-A--UCU-AU-CCAUGGGU-GG--GGGAU-AA-CUCCG-G-GAAA-CUG-GAG-CUAAUACC-G-CAU-GA---U----------------ACC---------------------------------------------------------------------------------------------U-GAG------------------------------------------------------------------------------------GGU-----------------CAAA--GG-C---------------------GCAA-------------------G-UC-G--C----------CU----------GUGG---AGG-A-GCCUGCGU-UUG--A------UU-A-G-CU-U-G---UUGGUG-GG-G-UAAA-GG-CCUACCAA-GGCG-AUG-AUCAAUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGGG-GCAA-CCCUGAUCCAGCAAUGCCGCG-UGU-GU-GA-AGAA-GGUU--UU-CG-GA-UUGUAAA------------------------GCACUUUC-GG-CGGG-GAC-G------A--------------------------U-GA------------------------U-GA-CGGU-A-C-CC--G-CAG---------AA-GAAGC-CCC-GGCUAAC-UUCGU---GCCAGCAGCCG-CGGUAAU-AC-GAAG-GGGGCU-A-GCG-UUGCU-CGGAAUGACUGGGCGUAAAGGGCGUG-UAG-G-CGGUUU-GUACAG-UCAG-AUGUG-AAA-UC-CCCGGG-CUU-AA-CCUGGG-AGC-U-------------------------------------------GC-A-U----------------------------------------------UUGA-UAC-GUGCA-GAC-U-A-G-AG-UA-----UGAGAG-AGGGU-UGU-GGAAUU-CUC--------------------AGU-GUA-GAG-GUGAAA-UU-C-GUAGAU-AUUGGGAAG-AAC-A-CCGG--U-G-GCGAAGGCGG--CAACCUG------GCUCA--------------------------------------------------------------UUA-CU--GACG-----CUGA-GG--CGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCUGUAAACGAUG-UGUG-CUGGAUG-UUGGGUAA--C---UUA----------------------------------GU-UACUCAG-UGUC-GUA-GCUAACGCGA-UAA-GCAC-ACCGCCUG-GGGAGUACGGCC-GCAA-GGUU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGCAG-AA-CCUUA-CCAGGGC-UUG-UA-UG-------------GAGAGG------C-UG-U-A-UUCA-GAGA-U-GG-A-UAUU--UC-----CC-----------------------------------------GCAA----------------------------------------------------------------GG----GA---CC-UCUUG-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUA-UC--UUUAG---U-U-GC-C-AG-CA--U-------------------------------GUUUGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUGGG-CACU-C-U-AAA-GAGAC-U-GCCG-GU-G-A-CAA-GCC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUAUG--UC-C-U-GGGCUACACACGUGCUACAAUGG-CGGUGA--C-AGU-GGGA-A-GC-U-A-G-AUGG-CG-ACAU-C-----------GU-G-CCGA-UCU-CU---AAAAACC-GUC-UCAGUUCGGA-UUGCACUC-U-GCAACUC-GAGUGCA-UGAAGGUGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUUGGUUUGACCU-UAAG-CCGG-UGA-G-CG-AA-CC----------------------------------GCA-A--------------------------------------GGACG-C-AGCCGA-CCACGGUCGGGUCAG-CG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCCUUU----------------------------------------------------------------------------------------
+>RhiMeli4 Rhizobium meliloti 4
+----------------------------------AACUUGAGAGUUU-GAU-CCUGGCUCAGAACGAAC-GC-UGGC-GGC-A-GG--C-UUAACACAU-GCAAGU-CGA-GCGC-CC--------------------------------------------------------------------------------------------GCAA----------------------------------G-----------------------------------------------------------GG--GAG-CGG-C-AG--A-CGGGUGAGU---AAC-GCGUGGG-A-A--UCU-AC-CCUUUUCU-AC--GGAAU-AA-CGCAG-G-GAAA-CUU-GUG-CUAAUACC-G-UAU-GA---G----------------CCC---------------------------------------------------------------------------------------------U-UCG------------------------------------------------------------------------------------GGG-----------------GAAA--GA-----------------------UUUA---------------------UC-G--G----------GA----------AAGG---AUG-A-GCCCGCGU-UGG--A------UU-A-G-CU-A-G---UUGGUG-GG-G-UAAA-GG-CCUACCAA-GGCG-ACG-AUCCAUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACAUUGGGA-CUGA-GA-CACG-GCCCAAA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGGC-GCAA-GCCUGAUCCAGCCAUGCCGCG-UGA-GU-GA-UGAA-GGCC--CU-AG-GG-UUGUAAA------------------------GCUCUUUC-AC-CGGU-GAA-G------A--------------------------U-AA------------------------U-GA-CGGU-A-A-CC--G-GAG---------AA-GAAGC-CCC-GGCUAAC-UUCGU---GCCAGCAGCCG-CGGUAAU-AC-GAAG-GGGGCU-A-GCG-UUGUU-CGGAAUUACUGGGCGUAAAGCGCACG-UAG-G-CGGAUU-GUUAAG-UGAG-GGGUG-AAA-UC-CCAGGG-CUC-AA-CCCUGG-AAC-U-------------------------------------------GC-C-U----------------------------------------------UUCA-UAC-UGGCA-AUC-U-A-G-AG-UC-----CAGAAG-AGGUG-AGU-GGAAUU-CCG--------------------AGU-GUA-GAG-GUGAAA-UU-C-GUAGAU-AUUCGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGG--CUCACUG------GUCUG--------------------------------------------------------------GUA-CU--GACG-----CUGA-GG--UGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AAUG-UUAGCCG-UCGGGCAG------UUUA----------------------------------C-UGUUCGG-UGGC-GCA-CGUAACGCAU-UAA-ACAU-UCCGCCUG-GGGAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGCAG-AA-CCUUA-CCAGCCC-UUGACA-UC-------------CCGAUC------G-CG-G-AUACGA-GAGA-C-CG-UAUCCU--UC-----AG-----------------------------------------UUCGG---------------------------------------------------------------CU----G----GA-UCGGA-GA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUCG-CC--CUUAG---U-U-GC-C-AG-CA--U--------------------------------UCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AAG-GGGAC-U-GCCG-GU-G-A-UAA-GCC-GA-GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUACG--GG-C-U-GGGCUACACACGUGCUACAAUGG-UGGUGA--C-AGU-GGGC-A-GC-G-A-G-ACCG-CG-AGGU-C-----------GA-G-CUAA-UCU-CC---AAAAGCC-AUC-UCAGUUCGGA-UUGCACUC-U-GCAACUC-GAGUGCA-UGAAGUUGGAAU-CGCUAGUA-AUCGC-AGA-UC-AG-CAU-GCUGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUUGGUUCUACCC-GAAG-GUAG-UGC-G-CU-AA-CC----------------------------------GCA-A--------------------------------------GGAGG-C-AGCUAA-CCACGGUAGGGUCAG-CG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCC-------------------------------------------------------------------------------------------
+>MasBurto Methanococcoides burtonii
+----------------------------------------AUCCGUU-GAU-CC-GC-AGAGGUU-ACU-GC-UAUC-GGU-GUUC--GACUAAGCCAU-GCGAGU-CAU-AUGU-UC--------------------------------------------------------------------------------------------UUCGU---------------------------------------------------------------------------------------------GA--ACA-UGG-C-GG--A-CUGCUCAGU---AAC-ACGUGGA-UAA--CCU-GC-CCUUAGGU-UU--GGCAU-AA-CUCCG-G-GAAA-CUG-GAG-AUAAUUCC-G-AAU-A------G-GUC-A--A-AU-AUGC--------------------------------------------------------------------------------------------UG-GAAU-----------------------------------------------------------------------------------GCU--U-U--U--UG-AUC-AAAA--GA-C---------------------UUCG-------------------G-UU-G--C----------CU----------AAGG---AUG-G-AUCUGCGG-UCU--A------UC-A-G-GU-U-G---UAGUGG-GU-G-UAAC-GU-ACCUACUA-GCCU-ACG-ACGGAUAUGGGUUGU-G-AG-------------A-GCAA-GAGC-CCAGAGAUGGAUU-CUGA-GA-CAUG-AAUCCAG-GCC-C-UACG--GGGC-GC-A-GC-A-G-GCGCG-AAAUCUUUA--------------------CAAU-GCGG-GAAA-CCGCGAUAAGGGGACACCGAG-UGC-CA-A-----G-CA----UU-U-----AUG--U-------------------------UGGCUGUC-CA-CAUG-U-------------------------------G-----U-AA-AC----G--------------------------G-C-AU--G-UGU-------U-AG-CAAGG-GCCGGGCAAGA-CCGGU---GCCAGCCGCCG-CGGUAAC-AC-CGG-CGGCCCG-A-GUG-GUAAU-CACUUUUAUUGGGUCUAAAGGGUCCG-UAG-C-CGGUUU-GAUCAG-UUCU-UCGGG-AAA-UC-UGACAG-CUC-AA-CUGUUA-GGCUU-------------------------------------------CC-G-G----------------------------------------------GGAA-UAC-UGUCA-GAC-U-U-G-GG-AC-----CGGGAG-AGGUA-AGA-GGUACU-ACA--------------------GGG-GUA-GGA-GUGAAA-UC-U-UGUAAU-CCCUGUGGG-ACC-A-CCAG--U-G-GCGAAGGCGU--CUUACCA------GAACG--------------------------------------------------------------GGU-CC--GACGG-----UGA-GG--GACGAAA-G-C-UGGGG-GCAC-GAACCGG-AUUAGAUAC-----CCGGGUAG-UCCCA-GCCGUAAACGAUG-UUCG-CUAGGUG-UCAGGGGC--GG-UGCGA--------------------------------CCG-CUUCUGG-UGCC-GUA-GGGAAGCCGU-GAA-GCGA-ACCACCUG-GGAAGUACGGCC-GCAA-GGCU-GAA-ACUU-AAA-GGAAUUG-GCGGGGG-AGC--ACUA--CA-A-CGG-GUGGAG-CC-UGCGGU-UUAAUUG-G-ACUCAACG-CCGGA-AA-ACUCA-CCGGGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACAGC-AAAAUGUAGGUCAAGCUAAAGACUUUACC-UGA-AUCGCUGAGAGGA-GGUGCAUGGCCGUCGUCA-GUUCGUACU-GUGA-AGCAU-CCUG-UUAA-GU-CAGGCAAC-GAGCGAGACC-CGUG-CC--CACUG---U-U-GC-C-AG-CA--U--GUCC--------------------------UUCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGA---UGAUGGG-UACU-C-U-GUG-GGGAC-C-GCUG-GU-G-C-UAA-ACC-A--GAGG-A-AGG-U-GCGG-GCUACGGU--AGGUCAGUAU-G-CC-CCGAAUC--UC-C-C-GGGCUACACGCGGGCUACAAUGG-UUGGGA--C-AAU-GGGU-U-CC-U-A-C-ACCG-AA-AGGU-G-----------AU-G-GCAA-UCU-CC-U-AAACCCA-ACC-GUAGUUCGAA-UUGAGGAC-U-GUAACUC-GUCCUCA-UGAAGCUGGAAU-CCGUAGUA-AUCGC-GUU-UC-AAC-AU-AGCGCGGUG-AAU-ACGUC-CCUGCUCCUUGCA----CACACCGCCCGUC-AAA--CCACCCGA-GUGAGGUAUGGGU-GA-G-GGCA-C-G-G-AC----------------------------------------UUA-------------------------------------------GUGC-CGUGUU-CGAACCUAAAUUUCG-CA-AGG-GGGGUU-AAGUCGUAACAAGGUAGCCGUAGGGGAAUCUG-CGGC-UGGAUCACCUCC-------------------------------------------------------------------------------------------
+>GluOxyda Gluconobacter oxydans
+-----------------------------------------GAGUUU-GAU-UCUGGCUCAGAGCGAAC-GC-UGGC-GGC-A-UG--C-UUAACACAU-GCAAGU-CGC-ACGA-AG--------------------------------------------------------GU----------------------------------UUCG----------------------------------GC----------------------------------------------------------CU--UAG-UGG-C-GG--A-CGGGUGAGU---AAC-GCGUAGG-G-A--UCU-AU-CCACGGGU-GG--GGGAC-AA-CUUCG-G-GAAA-CUG-GAG-CUAAUACC-G-CAU-GA---U----------------ACC---------------------------------------------------------------------------------------------U-GAG------------------------------------------------------------------------------------GGU-----------------CAAA--GG-C---------------------GCAA-------------------G-UC-G--C----------CU----------GUGG---AGG-A-ACCUGCGU-UCG--A------UU-A-G-CU-A-G---UUGGUG-GG-G-UAAA-GG-CCUACCAA-GGCG-AUG-AUCGAUAGCUGGUUU-G-AG-------------A-GGAU-GAUC-AGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGGC-GAAA-GCCUGAUCCAGCAAUGCCGCG-UGU-GU-GA-AGAA-GGUC--UU-CG-GA-UUGUAAA------------------------GCACUUUC-GA-CGGG-GAC-G------A--------------------------U-GA------------------------U-GA-CGGU-A-C-CC--G-UAG---------AA-GAAGC-CCC-GGCUAAC-UUCGU---GCCAGCAGCCG-CGGUAAU-AC-GAAG-GGGGCU-A-GCG-UUGCU-CGGAAUGACUGGGCGUAAAGGGCGCG-UAG-G-CGGUUG-UUACAG-UCAG-AUGUG-AAA-UC-CCCGGG-CUU-AA-CCUGGG-AAC-U-------------------------------------------GC-A-U----------------------------------------------UUGA-UAC-GUGAC-GAC-U-A-G-AG-UU-----CGAGAG-AGGGU-UGU-GGAAUU-CCC--------------------AGU-GUA-GAG-GUGAAA-UU-C-GUAGAU-AUUGGGAAG-AAC-A-CCGG--U-G-GCGAAGGCGG--CAACCUG------GCUCG--------------------------------------------------------------AUA-CU--GACG-----CUGA-GG--CGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCUGUAAACGAUG-UGUG-CUGGAUG-UUGGGAAA--C---UUA----------------------------------GU-UUCUCAG-UGUC-GAA-GCUAACGCGC-UAA-GCAC-ACCGCCUG-GGGAGUACGGCC-GCAA-GGUU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGCAG-AA-CCUUA-CCAGGGC-UUG-CA-UG-------------GGGAGG------A-CC-G-G-UUCA-GAGA-U-GG-A-CCUU---------UC-----------------------------------------UUCG----------------------------------------------------------------GA---------CC-UCCCG-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-UC--UUUAG---U-U-GC-C-AG-CA--C--U----------------------------UUCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-GUGGG-CACU-C-U-AGA-GAGAC-U-GCCG-GU-G-A-CAA-GCC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUAUG--UC-C-U-GGGCUACACACGUGCUACAAUGG-CGGUGA--C-AGU-GGGA-A-GC-U-A-C-AUGG-UG-ACAU-G-----------GU-G-CUGA-UCU-CU---AAAAGCC-GUC-UCAGUUCGGA-UUGUACUC-U-GCAACUC-GAGUACA-UGAAGGUGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUUGGUUCGACCU-UAAG-CCGG-UGA-G-CG-AA-CC----------------------------------GCA-A--------------------------------------GGACG-C-AGCCGA-CCACGGACGGGUCAG-CG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCCUUU----------------------------------------------------------------------------------------
+>ZooRami3 Zoogloea ramigera
+----------------------------------------AGAGUUU-GAU-NNUGGCUCAGAUUGAAC-GC-UGGC-GGC-A-UG--C-UUUACACAU-GCAAGU-CGA-ACG--GUAA-CAG------------------------------------------------GGAG----------------------------------CUUG----------------------------------CUCC-------------------------------------------------G-CUG--AC--GAG-UGG-C-GA--A-CGGGUGAGU---AAU-GCAUCGG-A-A--CGU-GC-CGUGUAAU-GG--GGGAU-AA-CGUAG-C-GAAA-GUU-ACG-CUAAUACC-G-CAU-AC---G----------------CCC---------------------------------------------------------------------------------------------U-GAG------------------------------------------------------------------------------------GGG-----------------GAAA--GU-G-GG-G-GA-C-C---------GCAA-----------GG---CCUC-AC-G--U----------UA----------UACG---AGC-G-GCCGAUGU-CGG--A------UU-A-G-CU-A-G---UUGGUG-GG-G-UAAA-GG-CCUACCAA-GGCG-ACG-AUCCGUAGCGGGUCU-G-AG-------------A-GGAU-GAUC-CGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUUUUGGA--------------------CAAU-GGGG-GCAA-CCCUGAUCCAGCCAUGCCGCG-UGA-GU-GA-ACAA-GGCC--UU-CG-GG-UUGUAAA------------------------GCUCUUUC-AG-GUGG-AAA-G------AA-AUCG-CAUCUU-------U-----U-AA-UA----C---AG-GGUG-UGG-AU-GA-CGGU-A-C-CA--U-CAG---------AA-GAAGC-ACC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GGUGCG-A-GCG-UUAAU-CGGAAUUACUGGGCGUAAAGCGUGCG-CAG-G-CGGUUA-UGUAAG-ACAG-AUGUG-AAA-UC-CCCGGG-CUC-AA-CCUGGG-AAC-U-------------------------------------------GC-G-U----------------------------------------------UUGU-GAC-UGCAU-AAC-U-A-G-AG-UA-----CGGCAG-AGGGA-GGU-GGAAUU-CCG--------------------CGU-GUA-GCA-GUGAAA-UG-C-GUAGAG-AUGCGGAGG-AAC-A-CCGA--U-G-GCGAAGGCAG--CCUCCUG------GGCCA--------------------------------------------------------------GUA-CU--GACG-----CUCA-UG--CACGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCCUAAACGAUG-UCAA-CUAGUUG-UUCGGUGA--G---GAGA---------------------------------CU-CAUUGAG-UAAC-GCA-GCUAACGCGU-GAA-GUUG-ACCGCCUG-GGGAGUACGGCC-GCAA-GGUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGA-CCC--GC-A--CA-A-GCG-GUGGAU-GA-UGUGGA-UUAAUUC-G-AUGCAACG-CGAAA-AA-CCUUA-CCUACCC-UUGACA-UG--------------CCAGG------A-AC-U-U-GCCA-GAGA-U-GG-C-UUGG--UGC----CC-----------------------------------------GAAA----------------------------------------------------------------GG---GAA---CC-UGG-A-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-UC--AUUAG---U-U-GC-C-AG-CA--U--------------------------------UAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AAU-GAGAC-U-GCCG-GU-G-A-CAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUAUG--GG-U-A-GGGCUUCACACGUCAUACAAUGG-UCGGUA--C-AGA-GGGU-U-GC-C-A-A-GCCG-CG-AGGU-G-----------GA-G-CCAA-UCC-CA-G-AAAGCCG-AUC-GUAGUCCGGA-UUGGAGUC-U-GCAACUC-GACUCCA-UGAAGUCGGAAU-CGCUAGUA-AUCGC-AGA-UC-AG-CAU-GCUGCGGUG-AAU-ACGUU-CCCGGGUCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUGGGGUUUACCA-GAAG-UAGG-UAG-C-UU-AA-CC----------------------------------UUC-G--------------------------------------GGAGG-G-CGCUUA-CCACGGUGAGCUUCA-UG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAUCGGAAGGUG-CGGC-UGGAUCACCUCCUU-----------------------------------------------------------------------------------------
+>DefTher2 Desulfotomaculum thermoacidovorans
+----------------------------------------AGAGUUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-UUAACACAU-GCAAGU-CGA-ACGG-GG---UUU------------AA-------------------------------CGAGAAG----------------------------------CUUA----------------------------------CUUUUUGUU----------------------------------------------AAA--CC--UAG-UGG-C-GG--A-CGGGUGAGU---AAC-GCGUGGA-UAA--CCU-GC-CCAAUAGC-CU--GGGAU-AA-CGCCG-G-GAAA-CCG-GUG-CUAAUACC-G-GAU-AC---G-U-UCA-C--C-GG--AUU---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GGU--C-C--G--GU-GAA-GAAA--GG-U---------------------CCAA-------------------A-CC-G--C----------UA----------CUGG---AUG-G-GUCCGCGU-CCC--A------UU-A-G-CU-A-G---UUGGUA-GG-G-UAAC-GG-CCUACCAA-GGCG-ACG-AUGGGUAGCCGGCCU-G-AG-------------A-GGGC-GACC-GGCCACACUGGAA-CUGA-GA-CACG-GUCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUCUUCCG--------------------CAAU-GGGC-GCAA-GCCUGACGGAGCAACGCCGCG-UGA-GU-GA-CGAA-GGUC--UU-CG-GA-UUGUAAA------------------------ACUCUGUC-CA-GAGG-GAA-G--A---A--------------------------G-CA-AG---------------------U-GA-CGGU-A-C-CA--C-UGG---------AG-GAAGC-CCC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAA-AC-GUAG-GGGGCG-A-GCG-UUGUC-CGGAAUUACUGGGCGUAAAGGGCGUG-UAG-G-CGGUCA-AGUAAG-UCAG-UCGUG-AAA-CC-CAGCGG-CUU-AA-CCGCUG-GCU-G-------------------------------------------GC-G-A----------------------------------------------UAGA-AAC-UGCGU-GGC-U-U-G-AG-UG-----CAGUAG-AGGGG-AGU-GGAAUU-CCC--------------------AGU-GUA-GCG-GUGAAA-UG-C-GUAGAU-AUUGGGAGG-AAC-A-CCCG--U-G-GCGAAAGCGG--CUCCCUG------GCCUG--------------------------------------------------------------UAA-CU--GACG-----CUGA-GG--CGCGAAA-G-C-GUGGG-UAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-GGUG-CUAGGUG-UUGGGGG-----UAUCGA-CC---------------------------------CCCCCAG-UGCC-GCA-GUUAACGCAC-UAA-GCAC-CCCGCCUG-GGGAGUACGGCC-GCA--GGUU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-UA-UGUGGU-UUAAUUC-G-ACGCAACG-CGAAG-AA-CCUUA-CCAGGUC-UUGACA-UC--------------CCCUG------G-CC-G-C-UGUG-GAAA-C-AC-A-GUUU--UCCA---UC-----------------------------------------UUCG----------------------------------------------------------------GA--UGGA---CA-GGG-A-GA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UGAA-GU-CCCGCAAC-GAGCGCAACC-CCUA-CC--UUUAG---U-U-GC-C-AG-CA--C-------------------------------GUGAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUGGG-CACU-C-U-AAA-GGGAC-U-GCCG-UU-G-A-CAA-AAC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CUUUAUG--AU-C-U-GGGCUACACACGUACUACAAUGG-CCGGUA--C-AGA-CGGC-A-GC-G-C-A-GCCG-CG-AGGC-G-----------AA-G-CGAA-CCC-GA-U-AAAGCCG-GUC-CCAGUUCGGA-UUGCAGGC-U-GCAACUC-GCCUGCA-UGAAGUCGGAAU-CGCUAGUA-AUCGC-AGG-UC-AG-CAU-ACUGCGGUG-AAU-ACGUC-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCACGAAA-GCCGGCAACACCC-GAAG-CCGG-UGA-G-CC-AA-CCC---------------------------------UUA-AU------------------------------------GGGAGG-C-AGCCGU-CGAAGGUGGGGUCGG-UA-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAUCGGAAGGUG-CGGC-UGGAUCACCUCCUUA----------------------------------------------------------------------------------------
+>AgrTume7 Agrobacterium tumefaciens 8
+-------------------------------------------GUUU-GAU-CCUGGCUCAGAACGAAC-GC-UGGC-GGC-A-GG--C-UUAACACAU-GCAAGU-CGA-ACGC-CC---------------------------------------------------------C----------------------------------GCAA----------------------------------G-----------------------------------------------------------GG--GAG-UGG-C-AG--A-CGGGUGAGU---AAC-GCGUGGG-A-A--CAU-AC-CCUUUCCU-GC--GGAAU-AG-CUCCG-G-GAAA-CUG-GAA-UUAAUACC-G-CAU-AC---G----------------CCC---------------------------------------------------------------------------------------------U-ACG------------------------------------------------------------------------------------GGG-----------------GAAA--GA-----------------------UUUA---------------------UC-G--G----------GG----------AAGG---AUU-G-GCCCGCGU-UGG--A------UU-A-G-CU-A-G---UUGGUG-GG-G-UAAA-GG-CCUACCAA-GGCG-ACG-AUCCAUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACAUUGGGA-CUGA-GA-CACG-GCCCAAA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGGC-GCAA-GCCUGAUCCAGCCAUGCCGCG-UGA-GU-GA-UGAA-GGCC--UU-AG-GG-UUGUAAA------------------------GCUCUUUC-AC-CGGA-GAA-G------A--------------------------U-AA------------------------U-GA-CGGU-A-U-CC--G-GAG---------AA-GAAGC-CCC-GGCUAAC-UUCGU---GCCAGCAGCCG-CGGUAAU-AC-GAAG-GGGGCU-A-GCG-UUGUU-CGGAAUUACUGGGCGUAAAGCGCACG-UAG-G-CGGAUA-UUUAAG-UCAG-GGGUG-AAA-UC-CCAGAG-CUC-AA-CUCUGG-AAC-U-------------------------------------------GC-C-U----------------------------------------------UUGA-UAC-UGGGU-AUC-U-U-G-AG-UA-----UGGAAG-AGGUA-AGU-GGAAUU-CCG--------------------AGU-GUA-GAG-GUGAAA-UU-C-GUAGAU-AUUCGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGG--CUUACUG------GUCCA--------------------------------------------------------------UUA-CU--GACG-----CUGA-GG--UGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AAUG-UUAGCCG-UCGGGCAG------UAUA----------------------------------C-UGUUCGG-UGGC-GCA-CGUAACGCAU-UAA-ACAU-UCCGCCUG-GGGAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGCAG-AA-CCUUA-CCAGCUC-UUGACA-UU------------C-GGGGU------U-UG-G-GCAGUG-GAGA-C-AU-UGUCCU-UCA-----G------------------------------------------UUAG----------------------------------------------------------------GC----UG---GC-CCCAG-AA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUCG-CC--CUUAG---U-U-GC-C-AG-CA--U--------------------------------UUAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AAG-GGGAC-U-GCCG-GU-G-A-UAA-GCC-GA-GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUACG--GG-C-U-GGGCUACACACGUGCUACAAUGG-UGGUGA--C-AGU-GGGC-A-GC-G-A-G-ACAG-CG-AUGU-C-----------GA-G-CUAA-UCU-CC---AAAAGCC-AUC-UCAGUUCGGA-UUGCACUC-U-GCAACUC-GAGUGCA-UGAAGUUGGAAU-CGCUAGUA-AUCGC-AGA-UC-AG-CAU-GCUGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUUGGUUUUACCC-GAAG-GUAG-UGC-G-CU-AA-CC----------------------------------GCA-A--------------------------------------GGAGG-C-AGCUAA-CCACGGUAGGGUCAG-CG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCC-------------------------------------------------------------------------------------------
+>LetIlli3 Leptonema illini
+-----------UAAUCUAUCGCAAGAUAGAUUCAUAACGGAGAGUUU-GAU-CCUGGCUCAGAACUAAC-GC-UGGC-GGC-G-CG--U-CUUAAACAU-GCAAGU-CGA-GCG--GC---AGC--------------------------------------------------AC----------------------------------UUCG----------------------------------G------------------------------------------------------GUG--GC--GAG-CGG-C-GA--A-CGGGUGAGU---AAC-ACGUAGG-UAA--UUU-GC-CCACGGAU-GG--GGGAU-AA-CCUUU-C-GAAA-GGA-AGG-CUAAUACC-G-CAU-AA---C-A-CCA-U--G-GU--UAC---------------------------------------------------------------------------------------------C-ACG------------------------------------------------------------------------------------GUA--A-U--U--AU-GGU-CAAA--GC-A---------------------GCAA-------------------U-GC-G--U----------CU----------GUGG---AGA-A-GCCUGCGU-CCG--A------UU-A-G-GU-A-G---UUGGUG-AG-G-UAAC-GG-CUCACCAA-GCCA-GCG-AUCGGUAGCCGGCCU-G-AG-------------A-GGGU-GAAC-GGCCACACUGGAA-CUGG-GA-CACG-GUCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UUAAG-AAUCUUGCG--------------------CAAU-GGAG-GCAA-CUCUGACGCAGCGACGCCGCG-UGU-GC-GA-UGAA-GGCC--CU-CG-GG-UUGUAAA------------------------GCACAACA-AA-CAGG-GAA-G--A---A--------------------------G-AA-AG---------------------U-GA-CGGU-A-C-CU--G-UCU---------GA-A--GC-ACC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAU-GGUGCA-A-GCG-UUGUU-CGGAAUCACUGGGCGUAAAGGGUGCG-CAG-G-CGGACU-GUUAAG-UCGG-GAGUG-AAA-AC-UGAGGG-CUC-AA-CCCUCA-GCC-U-------------------------------------------GC-U-U----------------------------------------------UCGA-AAC-UGGCA-GUC-U-G-G-AG-UC-----CCGGAG-AGGCA-GGC-GGAAUU-CCC--------------------GGU-GUA-GCG-GUGAAA-UG-C-ACAGAU-AUCGGGAGG-AAC-A-CCAA--U-G-GCGAAGGCAG--CCUGCUG------GACGG--------------------------------------------------------------AGA-CU--GACG-----CUCA-UG--CACGAAA-G-C-GUGGG-GAUC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCCUAAACGUUG-UAGA-CCAGACG-UUGGAGGC-----AUCAA-C--------------------------------C-CCUUCAG-UGUC-AAA-CCAAACGGAU-UAA-GUCU-ACCGCCUG-GGGACUAUGCUC-GCAA-GAGU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-NCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AUGAUACG-CGAAA-AA-CCUUA-CCCGGGC-UUGACA-UG------------C-AUCAG------A-CA-G-G-CGUA-GAGA-U-AC-G-CCCU---------CC-----------------------------------------GCGA----------------------------------------------------------------GG---------CU-GGU-G-CA--------------------------------------------------CAGGU-GCUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CCUA-CC--GUGUG---U-U-AC-C-AU-CA--U--------------------------------UAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-GACU-U-G-CAC-GGAAC-U-GCCG-GU-G-A-UAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCCUCAU-G-GC-CUUUAUG--UC-C-G-GGGCUACACACGUGCUACAAUGG-UCGGUA--C-AGA-AGGA-A-GC-G-A-A-GUCG-UG-AGAU-G-----------GA-G-CAGA-UCC-GA-G-AAAGCCG-AUC-UCAGUUCGGA-UUGGGGUC-U-GCAACUC-GACUCCA-UGAAGUCGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCACCCGA-GUUGGUAGUGCCC-GAAG-UGGU-CCG-G-CU-AA-CC----------------------------------GCA-A--------------------------------------GGAGG-C-AGAUUA-UCAAGGCAAGAUCGG-UG-AGG-GGGGUG-AAGUCGUAACAAGGUAGCCGUACGGGAACGUG-CGGC-UGGAUCACCUCCUU-----------------------------------------------------------------------------------------
+>RhbSpha2 Rhodobacter sphaeroides
+---------------------------------CAACUUGAGAGUUU-GAU-CCUGGCUCAGAAUGAAC-GC-UGGC-GGC-A-GG--C-CUAACACAU-GCAAGU-CGA-GCGA-AG--------------------------------------------------------UC----------------------------------UUCG----------------------------------GA----------------------------------------------------------CU--UAG-CGG-C-GG--A-CGGGUGAGU---AAC-GCGUGGG-A-A--CGU-GC-CCUUUGCU-UC--GGAAU-AG-CCCCG-G-GAAA-CUG-GGA-GUAAUACC-G-AAU-GU---G----------------CCC---------------------------------------------------------------------------------------------U-UUG------------------------------------------------------------------------------------GGG-----------------GAAA--GA-----------------------UUUA---------------------UC-G--G----------CA----------AAGG---AUC-G-GCCCGCGU-UGG--A------UU-A-G-GU-A-G---UUGGUG-GG-G-UAAU-GG-CCUACCAA-GCCG-ACG-AUCCAUAGCUGGUUU-G-AG-------------A-GGAU-GAUC-AGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUCUUAGA--------------------CAAU-GGGC-GCAA-GCCUGAUCUAGCCAUGCCGCG-UGA-UC-GA-UGAA-GGCC--UU-AG-GG-UUGUAAA------------------------GAUCUUUC-AG-GUGG-GAA-G------A--------------------------U-AA------------------------U-GA-CGGU-A-C-CA--C-CAG---------AA-GAAGC-CCC-GGCUAAC-UCCGU---GCCAGCAGCCG-CGGUAAU-AC-GGAG-GGGGCU-A-GCG-UUAUU-CGGAAUUACUGGGCGUAAAGCGCACG-UAG-G-CGGAUC-GGAAAG-UCAG-AGGUG-AAA-UC-CCAGGG-CUC-AA-CCCUGG-AAC-U-------------------------------------------GC-C-U----------------------------------------------UUGA-AAC-UCCCG-AUC-U-U-G-AG-GU-----CGAGAG-AGGUG-AGU-GGAAUU-CCG--------------------AGU-GUA-GAG-GUGAAA-UU-C-GUAGAU-AUUCGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGG--CUCACUG------GCUCG--------------------------------------------------------------AUA-CU--GACG-----CUGA-GG--UGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AAUG-CCAGUCG-UCGGGCAG------CAUG----------------------------------C-UGUUCGG-UGAC-ACA-CCUAACGGAU-UAA-GCAU-UCCGCCUG-GGGAGUACGGCC-GCAA-GGUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGCAG-AA-CCUUA-CCAACCC-UUGACA-UG-------------GCGAUC------G-CG-G-U-UCCA-GAGA-U-GG-U-UCCU--UC-----AG-----------------------------------------UUCGG---------------------------------------------------------------CU----G----GA-UCGCA-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UCGG-UUAA-GU-CCGGCAAC-GAGCGCAACC-CACG-UC--CUUAG---U-U-GC-C-AG-CA--U--------------------------------UCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AGG-GAAAC-U-GCCG-GU-G-A-UAA-GCC-G--GAGG-A-AGG-U-GUGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUACG--GG-U-U-GGGCUACACACGUGCUACAAUGG-CAGUGA--C-AAU-GGGU-------------------------------------------UAA-UCC-CA---AAAAGCU-GUC-UCAGUUCGGA-UUGGGGUC-U-GCAACUC-GACCCCA-UGAAGUCGGAAU-CGCUAGUA-AUCGC-GUA-AC-AG-CAU-GACGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-AUUGGUUCUACCC-GAAG-GCGG-U-GCG-CC-AA-CCUC--------------------------------GCA-A------------------------------------GAGGAGG-C-AGCCGA-CCACGGUAGGAUCAG-UG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCCUU-----------------------------------------------------------------------------------------
+>LatReute Lactobacillus reuteri
+----------------------------------------AGAGUUU-GAU-NNUGGCUCAGGAUGAAC-GC-CGGC-GGU-G-UG--C-CUAAUACAU-GCAAGU-CGU-ACGC-AC---UGG---CCCAACUGAUU-------------------------------GAUGGUG----------------------------------CUUG----------------------------------CACCUGAUUGACGAUGGAU----------------------------------CACCA--GU--GAG-UGG-C-GG--A-CGGGUGAGU---AAC-ACGUAGG-UAA--CCU-GC-CCCGGAGC-GG--GGGAU-AA-CAUUU-G-GAAA-CAG-AUG-CUAAUACC-G-CAU-AA-----C-AAC-A--A-AA--GCC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GGC--U-U--U--UG-UUU-GAAA--GA-U-GG-C----------------UUUG----------------GCUA-UC-A--C----------UC----------UGGG---AUG-G-ACCUGCGG-UGC--A------UU-A-G-CU-A-G---UUGGUA-AG-G-UAAC-GG-CUUACCAA-GGCG-AUG-AUGCAUAGCCGAGUU-G-AG-------------A-GACU-GAUC-GGCCACAAUGGAA-CUGA-GA-CACG-GUCCAUA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UAGGG-AAUCUUCCA--------------------CAAU-GGGC-GCAA-GCCUGAUGGAGCAACGCCGCG-UGA-GU-GA-AGAA-GGGU--UU-CG-GC-UCGUAAA------------------------GCUCUGUU-GU-UGGA-GAA-G--A---AC-GUGC-GUGAGA-------G-----U-AA-C-----U---GU-UCNC-GCA-GU-GA-CGGU-A-U-CC--A-ACC---------AG-AAAGU-CAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GUGGCA-A-GCG-UUAUC-CGGAUUUAUUGGGCGUAAAGCGAGCG-CAG-G-CGGUUG-CUUAGG-UCUG-AUGUG-AAA-GC-CUUCGG-CUU-AA-CCGAAG-AAG-U-------------------------------------------GC-A-U----------------------------------------------CGGA-AAC-CGGGC-GAC-U-U-G-AG-UG-----CAGAAG-AGGAC-AGU-GGAACU-CCA--------------------UGU-GUA-GCG-GUGGAA-UG-C-GUAGAU-AUAUGGAAG-AAC-A-CCAG--U-G-GCGAAGGCGG--CUGUCUG------GUCUG--------------------------------------------------------------CAA-CU--GACG-----CUGA-GG--CUCGAAA-G-C-AUGGG-UAGC-GAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAU-GCCGUAAACGAUG-AGUG-CUAGGUG-UUGGAGGG--U---UUCC---------------------------------GC-CCUUCAG-UGCC-GGA-GCUAACGCAU-UAA-GCAC-UCCGCCUG-GGGAGUACGACC-GCAA-GGUU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCUACG-CGAAG-AA-CCUUA-CCAGGUC-UUGACA-UC--------------UUGCG------C-UA-A-C-CUUA-GAGA-U-AA-G-GCGU--UN-----CC-----------------------------------------UUCG----------------------------------------------------------------GG----GA---CG-CAA-U-GA--------------------------------------------------CAGGU-GGUGCAUGGUCGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCUGCAAC-GAGCGCAACC-CUUG-UU--ACUAG---U-U-GC-C-AG-CA--U--------------------------------UAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AGU-GAGAC-U-GCCG-GU-G-A-CAA-ACC-G--GAGG-A-AGG-U-GGGG-ACGACGUC--AGAUCAUCAU-G-CC-CCUUAUG--AC-C-U-GGGCUACACACGUGCUACAAUGG-ACGGUA--C-AAC-GAGU-C-GC-A-A-G-CUCG-CG-AGAG-U-----------AA-G-CUAA-UCU-CU-U-AAAGCCG-UUC-UCAGUUCGGA-CUGUAGGC-U-GCAACUC-GCCUACA-CGAAGUCGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUUUGUAACGCCC-AAAG-UCGG-UGG-C-CU-AA-CCU---------------------------------UUA---------------------------------------UGGAGG-G-AGCCGC-CUAAGGCGGGACAGA-UG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGAGAGCCUG-CGGC-UGGAUCACCUCCUUUNU--------------------------------------------------------------------------------------
+>FrnPhil3 Francisella philomiragia
+------------------------------------UUGAAGAGUU--GAU-CAUGGCUCAGAUUGAAC-GC-UGGU-GGC-A-UG--C-UUAACACAU-GCAAGU-CGA-ACG--GUAA-CAG-------------------------------------------------GUC----------------------------------UUCG----------------------------------GAU--------------------------------------------------G-CUG--AC--GAG-UGG-C-GG--A-CGGGUGAGU---AAC-GCGUAGG-A-A--UCU-GC-CCAUUUGA-GG--GGGAU-AC-CAGUU-G-GAAA-CGA-CUG-UUAAUACC-G-CAU-AA---U----------------AUC---------------------------------------------------------------------------------------------U-GUG------------------------------------------------------------------------------------GAU-----------------UAAA--GG-U-G--G----C-----------UU-A------------G---CGUG-CC-G--C----------AG----------AUGG---AUG-A-GCCUGCGU-UGG--A------UU-A-G-CU-A-G---UUGGUG-GG-G-UAAG-GG-CCCACCAA-GGCU-ACG-AUCCAUAGCUGAUUU-G-AG-------------A-GGAU-GAUC-AGCCACAUUGGGA-CUGA-GA-CACG-GCCCAAA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGGG-GAAA-CCCUGAUCCAGCAAUGCCAUG-UGU-GU-GA-AGAA-GGCU--CU-AG-GG-UUGUAAA------------------------GCACUUUA-GU-UGGG-GAG-G------AA-AGCC-UAUGAG-------U-----U-AA-UA----G---CU-UGUA-GGA-AG-GA-CGUU-A-C-CC--A-AAG---------AA-UAAGG-ACC-GGCUAAC-UCCGU---GCCAGCAGCCG-CGGUAAU-AC-GGGG-GGUCCG-A-GCG-UUAAU-CGGAAUUACUGGGCGUAAAGGGUCUG-UAG-G-UGGUUU-GUUAAG-UCAG-AUGUG-AAA-GC-CCAGGG-CUC-AA-CCUUGG-AAC-U-------------------------------------------GC-A-U----------------------------------------------UUGA-UAC-UGGCA-AAC-U-A-G-AG-UA-----UGGUAG-AGGAA-UGG-GGAAUU-UCU--------------------GGU-GUA-GCG-GUGAAA-UG-C-GUAGAG-AUCAGAAGG-AAC-A-CCAA--U-G-GCGAAGGCAA--CAUUCUG------GACCA--------------------------------------------------------------AUA-CU--GACA-----CUGA-GG--GACGAAA-G-C-GUGGG-GAUC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCUGUAAACGAUG-AGUA-CUAGCUG-UUGGAUUC--G--GUGUA-A-------------------------------AG-GAUCUAG-UGGC-GCA-CGUAACGCGU-UAA-GUAC-UCCGCCUG-GGGACUACGGCC-GCAA-GGCU-AAA-ACUC-AAA-GGAAUUG-ACGGGGA-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AUGCAACG-CGAAG-AA-CCUUA-CCUGGUC-UUGACA-UC--------------CUGCG------A-AC-U-U-UCUA-GAGA-U-AG-A-UUGG--U------GC-----------------------------------------UUCG----------------------------------------------------------------GA-----A---CG-CAG-U-GA--------------------------------------------------CAG-U-GCUGCACGGCUGUCGUCA-GCUCGUGUU-GUGA-AAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CCUA-UU--GAUAG---U-U-AC-C-AU-CA--U--------------------------------UAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-UACU-C-U-AUU-GAGAC-U-GCCG-CU-G-A-CAA-GGC-G--GAGG-A-AGG-U-GGGG-ACGACGUC--AAGUCAUCAU-G-GC-CCUUACG--AC-C-A-GGGCUACACACGUGCUACAAUGG-GUAUUA--C-AGA-GGGC-U-GC-G-A-A-GGUG-CG-AGCU-G-----------GA-G-CGAA-ACU-CA-G-AAAGGUA-CUC-UUAGUCCGGA-UUGCAGUC-U-GCAACUC-GACUGCA-UGAAGUCGGAAU-CGCUAGUA-AUCGC-AGG-UC-AG-AAU-ACUGCGGUG-AAU-ACGUU-CCCGGGUCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUGGGUUGCUCCA-GAAG-UAGA-UAG-C-UU-AA-------------------------------------CGA-A----------------------------------------UGG-G-CGUUUA-CCACGGAGUGAUUCA-UG-ACU-GGGGUG-AAGUCGUAACAAUGGUAGCCGUAGGGAACCUG-CGGC-UGGAUCACCUCCUU-----------------------------------------------------------------------------------------
+>AzoCauli Azorhizobium caulinodans 2
+-------------------------------------------GUUU-GAU-CCUGGCUCAGAGCGAAC-GC-UGGC-GGC-A-GG--C-CUAACACAU-GCAAGU-CGA-GCGC-CC---------------------------------------------------------A----------------------------------GCAA----------------------------------U-----------------------------------------------------------GG--GAG-CGG-C-AG--A-CGGGUGAGU---AAC-GCGUGGG-G-A--UGU-GC-CCAAUGGU-GC--GGAAU-AA-CCCAG-G-GAAA-CUU-GGA-UUAAUACC-G-CAU--U---G----------------CCC---------------------------------------------------------------------------------------------U-UCG------------------------------------------------------------------------------------GGG-----------------GAAA--GA-----------------------UUUA---------------------UC-G--C----------CA----------UUGG---AUC-A-ACCCGCGU-CUG--A------UU-A-G-CU-A-G---UUGGUG-AG-G-UAAA-GG-CUCACCAA-GGCG-ACG-AUCAGUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGGC-GCAA-GCCUGAUCCAGCCAUGCCGCG-UGA-GU-GA-UGAA-GGCC--UU-AG-GG-UUGUAAA------------------------GCUCUUUC-GC-CGGU-GAA-G------A--------------------------U-AA------------------------U-GA-CGGU-A-A-CC--G-GAG---------AA-GAAGC-CCC-GGCUAAC-UUCGU---GCCAGCAGCCG-CGGUAAU-AC-GAAG-GGGGCA-A-GCG-UUGCU-CGGAAUCACUGGGCGUAAAGCGCACG-UAG-G-CGGAUC-GUUAAG-UCAG-GGGUG-AAA-GC-CUG-AG-CUC-AA-CUCCAG-AAC-U-------------------------------------------GC-C-C----------------------------------------------UUGA-UAC-UGGCG-AUC-U-U-G-AG-UU-----CGAGAG-AGGUU-GGU-GGAACU-CCG--------------------AGU-GUA-GAG-GUGAAA-UU-C-GUAGAU-AUUCGGAAG-AAC-A-CCAG--U-G-GCGAAGGCGG--CCAACUG------GCUCG--------------------------------------------------------------AUA-CU--GACG-----CUGA-GG--UGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-GAUG-CUAGCCG-UUGGGGAG------CUUG----------------------------------C-UCUUCAG-UGGC-GCA-CGUAACGCCU-UAA-GCAU-CCCGCCUG-GGGAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGCAG-AA-CCUUA-CCAGCCU-UUGACA-UG--------------GCAGG----A-C-GA-C-U-UCCG-GAGA-C-GG-A-UUUC-UUC-----CA-----------------------------------------GCAA----------------------------------------------------------------UG----GA---CC-UGC-A-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUCG-CC--UUUAG---U-U-GC-C-AU-CA--U--------------------------------UCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AAA-GGGAC-U-GCCG-GU-G-A-UAA-GCC-GC-GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUACG--GG-C-U-GGGCUACACACGUGCUACAAUGG-CGGUGA--C-AAU-GGGA-U-GC-G-A-G-CCUG-CG-AGGG-U-----------GA-G-CAAA-UCU-CC---AAAAGCC-GUC-UCAGUUCGGA-UUGCACUC-U-GCAACUC-GAGUGCA-UGAAGUUGGAAU-CGCUAGUA-AUCGU-GGA-UC-AG-CAU-GCCACGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUUGGCUUUACCC-GAAG-GCGU-UGC-G-CU-AA-CC----------------------------------GCA-A--------------------------------------GGAGG-C-AGGCGA-CCACGGUAGGGUCAG-UG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUGCGGCUGGAUCACCU-----------------------------------------------------------------------------------------------
+>NatMagad Natronobacterium magadii
+----------------------UUGCGCUGGGGAGACCAUUCCGGUU-GAU-CCUGCCGGAGGUC-AUU-GC-UAUU-GGA-GUCC--GAUUUAGCCAU-GCUAGU-UGU-ACGA-GU--------------------------------------------------------------------------------------------UUAG----------------------------------------------------------------------------------------------AC--UCG-UAG-C-AG--A-UAGCUCAGU---AAC-ACGUGGC-CAA--ACU-AC-CCUAUGGA-UC--CAGAC-AA-CCUCG---GAAA-CUG-AGG-CUAAUCUG-G-AAU-A------C-GAC-U--C-UC-AUCC--------------------------------------------------------------------------------------------UG-GAGU-----------------------------------------------------------------------------------GGA--G-A--G--AG-UCC-GAAA-UGC-----------------------UCCG---------------------GC-G--C----------CA----------UAGG---AUG-U-GGC--CGG-CCG--A------UU-A-G-GU-A-G---ACGGUG-GG-G-UAAC-GG-CCCACCGU-GCCG-AUA-AUCGGUACGGGUUGU-G-AG-------------A-GCAA-GAGC-CCGGAGACGGUAU-CUGA-GA-CAAG-AUACCGG-GCC-C-UACG--GGGC-GC-A-GC-A-G-GCGCG-AAACCUUUA--------------------CACU-GCAC-GCCA-GUGCGAUAAGGGGACUCCAAG-UGC-GA-G-----G-GC----AUAUA----GUC--C-------------------------UCGCUUUU-UG-CGAC-C-------------------------------G-----U-AA-GG---UU--------------------------G-G-UC--G-CGG---------AA-UAAGU-GCUGGGCAAGA-CCGGU----CCAGCCGCCG-CGGUAA--AC-CGG-CAGCACG-A-G---AUGAC-CGGUGUUAUUGGGCCUAAAGCGUCCG-UAG-C-UGGCCG-CGCAAG-UCUA-UCGGG-AAA-UC-UCUUCG-CUU-AA-CGGAGA-GGCGAU------------------------------------------CC-G-G----------------------------------------------UGGA-AAA--AUGU-GGC-U-U-G-GG-AC-----CGGAAG-ACCAG-AGG-GGUACG-UCU--------------------GGG-GUA-GGA-GUGAAA-UC-C-CGUAAU-CCUGGACGG-ACC-A-CCGG--U-G-GCGAAAGCGC--CUCUGGA------AGACG--------------------------------------------------------------GAU-CC--GACGG-----UGA-GG--GACGAAA-G-C-UCGGG-UCAC-GAACCGG-AUUAGAUAC-----CCGGGUAG-UCCGA-GCUGUAAACGAUG-UCUG-CUAGGUG-UGACACAG--GC-UACGA--------------------------------GCC-UGUGUUG-UGCC-GUA-GGGAAGCCGU-GAA-GCAG-ACCGCCUG-GGAAGUACGUCC-GCAA-GGAU-GAA-ACUU-AAA-GGAAUUG-GCGGGGG-AGC--ACUA--CA-A-CCG-GAGGAG-CC-UGCGGU-UUAAUUG-G-ACUCAACG-CCGGA-CA-UCUCA-CCAGCAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACAAUAGUAAUGACGGUCAGUGUGAUGAGCUUACCUGGAGGCUAUUGAGAGGA-GGUGCAUGGCCGCCGUCA-GCUCGUACC-GUGA-GGCGU-CCUG-UUAA-GU-CAGGCAAC-GAGCGAGACC-CGCU-CU--CCUAA---U-U-GC-C-AG-CA--A--CGAC--------------------------CUUU--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGU---GGUUGGG-UACA-U-U-AGG-AGGAC-U-GCCG-CU-G-C-CAA-AGC-G--GAGG-A-AGG-A-ACGG-GCAACGGU--AGGUCAGUAU-G-CC-CCGAAUG--UG-C-U-GGGCAACACGCGGGCUACAAUGG-CCACGA--C-AGU-GGGA-U-GC-A-A-C-GCCG-AA-AGGC-G-----------AC-G-CUAA-UCU-CC-U-AAACGUG-GUC-GUACUUCGGA-UUGAGGGC-U-GAAACUC-GCCCUCA-UGAAGCUGGAUU-CGGUAGUA-AUCGC-GCC-UC-AG-AAG-GGCGCGGUG-AAU-ACGUC-CCUGCUCCUUGCA----CACACCGCCCGUC-AAA--GCACCCGA-GUGGGGUCCGGAU-GA-G-GCCC-G-G---------------------------------------------UUU-A----------------------------------------------CCGGGU-CGAAUCUGG-CUCCG-CA-AGG-GGGCUU-AAGUCGUAACAAGGUAGCCGUAGGGGAAUCUG-CGGC-UGGAUCACCUCCACAGAUCGGGACUGGCGACGCCCCAGCCC--------------------------------------------------------------
+>HaoMaris Halobacterium marismortui
+--------------------------------------AUUCCGGUU-GAU-CCUGCCGGAGGCC-AUU-GC-UAUC-GGA-GUCC--GAUUUAGCCAU-GCUAGU-UGC-ACGA-GU--------------------------------------------------------------------------------------------UUAG----------------------------------------------------------------------------------------------AC--UCG-UAG-C-AU--A-UAGCUCAGU---AAC-ACGUGGC-CAA--ACU-AC-CCUACAGA-CC--GCAAU-AA-CCUCG-G-GAAA-CUG-AGG-CCAAUAGC-G-GAU-A------U-AAC-U--C-UC-AUGC--------------------------------------------------------------------------------------------UG-GAGU-----------------------------------------------------------------------------------GCA--G-A--G--AG-UUA-GAAA-CGU-----------------------UCCG---------------------GC-G--C----------UG----------UAGG---AUG-U-GGCUGCGG-CCG--A------UU-A-G-GU-A-G---AUGGUG-GG-G-UAAC-GG-CCCACCAU-GCCG-AUA-AUCGGUACAGGUUGU-G-AG-------------A-GCAA-GAGC-CUGGAGACGGUAU-CUGA-GA-CAAG-AUACCGG-GCC-C-UACG--GGGC-GC-A-GC-A-G-GCGCG-AAACCUUUA--------------------CACU-GCAC-GACA-GUGCGAUAGGGGGACUCCGAG-UGU-GA-G-----G-GC----AUAUA----GCC--C-------------------------UCGCUUUU-CU-GUAC-C-------------------------------G-----U-AA-GG----U--------------------------G-G-UA--C-AGG---------AA-CAAGG-ACUGGGCAAGA-CCGGU---GCCAGCCGCCG-CGGUAAU-AC-CGG-CAGUCCG-A-GUG-AUGGC-CGAUAUUAUUGGGCCUAAAGCGUCCG-UAG-C-UUGCUG-UGUAAG-UCCA-UUGGG-AAA-UC-GACCAG-CUC-AA-CUGGUC-GGCGU-------------------------------------------CC-G-G----------------------------------------------UGGA-AAC-UACAC-AGC-U-U-G-GG-GC-----CGAGAG-ACUCA-ACG-GGUACG-UCC--------------------GGG-GUA-GGA-GUGAAA-UC-C-UGUAAU-CCUGGACGG-ACC-A-CCAA--U-G-GGGAAACCAC--GUUGAGA------GACCG--------------------------------------------------------------GAC-CC--GACAG-----UGA-GG--GACGAAA-G-C-CAGGG-UCUC-GAACCGG-AUUAGAUAC-----CCGGGUAG-UCCUG-GCUGUAAACAAUG-CUCG-CUAGGUA-UGUCACGC--GC-CAUGA--------------------------------GCA-CGUGAUG-UGCC-GUA-GUGAAGACGA-UAA-GCGA-GCCGCCUG-GGAAGUACGUCU-GCAA-GGAU-GAA-ACUU-AAA-GGAAUUG-GCGGGGG-AGC--ACCA--CA-A-CCG-GAGGAG-CC-UGCGGU-UUAAUUG-G-ACUCAACG-CCGGA-CA-UCUCA-CCGGUCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACAGUAGUAAUGACAGUCAGGUUGACGACUUUACU-CGACGCUACUGAGAGGA-GGUGCAUGGCCACCGUCA-GCUCGUACC-GUGA-GGCGU-CCUG-UUAA-GU-CAGGCAAC-GAGCGAGACC-CACA-CU--UCUAG---U-U-GC-C-AG-CA--A--CACC--------------------------CCUGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGU---GGUUGGG-UACA-C-U-AGG-AGGAC-U-GCCA-UU-G-G-UAA-AAU-G--GAGG-A-AGG-A-AUGG-GCAACGGU--AGGUCAGUAU-G-CC-CCGAAUG--GA-C-C-GGGCAACACGCGGGCUACAAUGG-CUAUGA--C-AGU-GGGA-U-GC-A-A-C-GCCG-AA-AGGC-G-----------AC-G-CUAA-UCU-CC---AAACGUA-GUC-GUAGUUCGGA-UUGCGGGC-U-GAAACCC-GCCCGCA-UGAAGCUGGAUU-CGGUAGUA-AUCGC-GUG-UC-AGA-AG-CGCGCGGUG-AAU-ACGUC-CCUGCUCCUUGCA----CACACCGCCCGUC-AAA--GCACCCGA-GUGGGGUCCGGAU-GA-G-GCCG-U-C---------------------------------------------AUG-C----------------------------------------------GACGGU-CGAAUCUGGGCUCCG-CA-AGG-GGGCUU-AAGUCGUAACAAGGUAGCCGUAGAGGAAUCUG-UGGC-UGGAUCACCUCCU------------------------------------------------------------------------------------------
+>ClmSacch "Caldocellum saccharolyticum"
+-------------------------------------------GUUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-CUAACGCAU-GCAAGU-CGA-GCGG-AG---AUG--------GUGGUU-------------------------------GAAGGUG----------------------------------AUG-----------------------------------AGCUGGAGGCUGC------------------------------------------CAU--CU--UAG-CGG-C-GG--A-CGGGUGAGU---AAC-ACGUGAG-CAA--CCU-AC-CCCCAGCA-CG--GGGAU-AA-CAGCU-C-GAAA-GGG-CUG-CUAAUACC-C-GAU-GG---G-A-CCA-C--G-UC--AUC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GGU--G-A--U--GU-GGU-GAAA--GG-G-UA-G----C-CG--------GGG---------A--GG---CUAUACU-G--G----------CU----------GGGG---AUG-G-GCUCGCGG-CCC--A------UC-A-G-CU-A-G---UUGGUG-GG-G-UAAC-GG-CCUACCAA-GGCG-ACG-ACGGGUAGCCGGCCU-G-AG-------------A-GGGU-GUAC-GGCCACAGUGGGA-CUGA-GA-CACG-GCCCACA-CUC-C-UACG--GGAG-GC-A-GC-A-G-CGGGG-AAUCUUGCG--------------------CAAU-GGGC-GGAA-GCCUGACGCAGCGACGCCGCG-UGA-GG-GA-AGGA-AGCC--UU-CG-GG-GUGUAAA------------------------CCUCUUUG-GA-CGGG-GA--G--A---A--------------------------G-UA-GG---------------------A-GA-UAGU-A-C-CC--G-UUU---------AA-AAAGC-CAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GUGGCG-A-GCG-UUGUC-CGGAAUUACUGGGCGUAAAGGGUGCG-UAG-G-CGGCUA-UGCGAG-UUAA-GCGUG-AAA-GC-CUUAGG-CUC-AA-CCUAAG-GAU-U-------------------------------------------GC-G-C----------------------------------------------UUAA-UAC-UGCAU-AGC-U-U-G-AG-UG-----CGGGAG-AGGAC-GGC-GGAAUU-CCC--------------------GGU-GUA-GCG-GUGAAA-UG-C-GUAGAU-AUCGGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGG--CCGUCUG------GACCG--------------------------------------------------------------UAA-CU--GACG-----CUGA-GG--CACGAAA-G-C-GUGGG-GAGC-GAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCUGUAAACGAUG-GAUG-CUAGGUG-UGGGGGAG-----AAGGA----------------------------------C-UCCUCCG-UGCC-GUA-GUUAACACAA-UAA-GCAU-CCCGCCUG-GGGAGUACGGCC-GCAA-GGUU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCAGGGC-UUGACA-UG------------C-CGGGG--------AC-C-U-GCCC-GAAA-G-GG-U-GGGG--UGCCU-GACC----------------------------------------GUAA---------------------------------------------------------------GGUUAGGAG---CC-CGG-A-CA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CCUG-CC--CUUAG---U-U-GC-C-AG-CG--C-------------------------------GUAAUG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUGGG-CACU-C-U-AAG-GGGAC-U-GCCG-UC-G-A-UGA-GGC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--CC-C-U-GGGCUACACACGUGCUACAAUGG-GUGCUA--C-AGA-GGGCGU-GC-G-A-A-GGCG-CG-AGCC-G-----------GA-G-CGAA-UCC-CA-A-AAAAGCA-CCC-CCAGUUCGGA-UUGCAGGC-U-GCAACUC-GCCUGCA-UGAAGUCGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGAGA-GUCAGCAACACCU-GAAG-ACAC-AGG---------------------------------------------UUAGG----------------------------------------------CUGUGU-UGAAGGUGGGGCUGA-UG-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUACGGGAACGUG-CGGC-UGGAUCACCUCCUUU----------------------------------------------------------------------------------------
+>StrGrise Streptomyces griseus
+-------------------------------CAUUCACGGAGAGUUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-UUAACACAU-GCAAGU-CGA-ACG--AUG--A-A------------------------------------------------GCCU----------------------------------UUCG----------------------------------GGGU----------------------------------------------------GG--AU--UAG-UGG-C-GA--A-CGGGUGAGU---AAC-ACGUGGG-CAA--UCU-GC-CCUUCACU-CU--GGGAC-AA-GCCCU-G-GAAA-CGG-GGU-CUAAUACC-G-GAU-AA---C-A-CUC-U--G-U---CCC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GGG----A--C--GG-GGUUAAAA--GC-----------------------UCCG---------------------GC-G--G----------UG----------AAGG---AUG-A-GCCCGCGG-CCU--A------UC-A-G-CU-U-G---UUGGUG-GG-G-UAAU-GG-CCUACCAA-GGCG-ACG-ACGGGUAGCCGGCCU-G-AG-------------A-GGGC-GACC-GGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCA--------------------CAAU-GGGC-GAAA-GCCUGAUGCAGCGACGCCGCG-UGA-GG-GA-UGAC-GGCC--UU-CG-GG-UUGUAAA------------------------CCUCUUUC-AG-CAGG-GAA-G--A-A-GC-------------------------G-AG-A---------------------GU-GA-CGGU-A-C-CU--G-CAG---------AA-GAAGC-GCC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GGCGCA-A-GCG-UUGUC-CGGAAUUAUUGGGCGUAAAGAGCUCG-UAG-G-CGGCUU-GUCACG-UCGG-AUGUG-AAA-GC-CCGGGG-CUU-AA-CCCCGG-GUC-U-------------------------------------------GC-A-U----------------------------------------------UCGA-UAC-GGGCU-AGC-U-A-G-AG-UG-----UGGUAG-GGGAG-AUC-GGAAUU-CCU--------------------GGU-GUA-GCG-GUGAAA-UG-C-GCAGAU-AUCAGGAGG-AAC-A-CCGG--U-G-GCGAAGGCGG--AUCUCUG------GGCCA--------------------------------------------------------------UUA-CU--GACG-----CUGA-GG--AGCGAAA-G-C-GUGGG-GAGC-GAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGUUG-GGAA-CUAGGUG-UUGGCGAC----AUUCCA-C--------------------------------G-UCGUCGG-UGCC-GCA-GCUAACGCAU-UAA-GUUC-CCCGCCUG-GGGAGUACGGCC-GCAA-GGCU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCA-GCGGAG-CA-UGUGGC-UUAAUUC-G-ACGCAACG-CGAAG-AA-CCUUA-CCAAGGC-UUGACA-UA------------U-ACCGG------A-AA-G-C-AUCA-GAGA-U-GG-U-GCCC---------CC-----------------------------------------CUUGU---------------------------------------------------------------GG---------UC-GGU-A-UA--------------------------------------------------CAGGU-GGUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-UU--CUGUG---U-U-GC-C-AG-CA--U--GCC---------------------------UUCGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GG---UGAUGGG-GACU-C-A-CAG-GAGAC-U-GCCG-GG-G-U-CAA-CUC-G--GAGG-A-AGG-U-GGGG-ACGACGUC--AAGUCAUCAU-G-CC-CCUUAUG--UC-U-U-GGGCUGCACACGUGCUACAAUGG-CCGGUA--C-AAU-GAGC-U-GC-G-A-U-G-CG-CG-AGGC-G-----------GA-G-CGAA-UCU-CA-A-AAAGCCG-GUC-UCAGUUCGGA-UUGGGGUC-U-GCAACUC-GACCCCA-UGAAGUCGGAGU-UGCUAGUA-AUCGC-AGA-UC-AGCAUU-GCUGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACG--UCACGAAA-GUCGGUAACACCC-GAAG-CCGG-UGG-C-CC-AA-CCC---------------------------------CUU-GU------------------------------------GGGAGG-G-AGCUGU-CGAAGGUGGGACUGG-CG-AUU-GGGACG-AAGUCGUAACAAGGUAGCCGUACCGGAAGGUG-CGGC-UGGAUCACCUCCUUUCU--------------------------------------------------------------------------------------
+>CloSp Clostridium sp
+---------------------------------UUGUUGGAGAGUUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-CUAACACAU-GCAAGU-CGA-GCGG-UC---CGG---CACUCAACUAA-------------------------------GUGCUUA-CUUAAGGGG---AAGGAAGUAUAGUAGAAGAAGAAGGUAAUAAAAGUGAAG----------CAAAGUAAGGUAAGCACGGAGUUGAGUG-------------------------------------CCG--GA--UAG-CGG-C-GG--A-CGGGUGAGU---AAC-GCGUGGG-CAA--CCU-AC-CCUUAAGA-CC--GGGAU-AA-CACCU-C-GAAA-GGG-GCG-CUAAUACU-G-GAU-AA---G-C-UCC-U--U-GU--AGG---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------CCU--A-U--G--AG-GAG-GGAA--GG-U-AG-C----------------GGAA----------------GCUA-CC-G--C----------UU----------AAGG---AUG-G-GCCCGCGU-CCC--A------UC-A-G-CU-A-G---UUGGUA-GG-G-UAAC-GG-CCUACCAA-GGCG-ACG-ACGGGUAGCCGGCCU-G-AG-------------A-GGGU-GGUC-GGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUCUUGCG--------------------CAAU-GGGC-GAAA-GCCUGAC--AGCGACGCUGCG-UGA-GC-GA-AGAA-GGCC--UU-CG-GG-UCGUAAA------------------------GCUCGAUA-GU-GUGG-GAA-G--A---A--------------------------U-AG-A----------------------U-GA-CGGU-A-C-CA--C-A-----------CG-AAAGC-CCC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAG-AC-GUAG-GGGGCG-A-GCG-UUGUC-CGGAAUUACUGGGCGUAAAGGGCGCG-UAG-G-CGGCCA-CUUAAG-UCAG-GUGUA-AAA-AA-CCCGGG-CUC-AA-CCCGGG-GGA-U-------------------------------------------GC-A-C----------------------------------------------AUGA-AAC-UGGGU-GGC-U-A-G-AG-GG-----CAGGAG-AGGGG-AGU-GGAAUU-CCC--------------------GGU-GUA-GCG-GUGAAA-UG-C-GUAGAU-AUCGGGAGG-AAU-A-CCAG--U-G-GCGAAGGCGA--CUCUCUG------GACUG--------------------------------------------------------------ACC-CU--GACG-----CUGA-GG--CGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-GGUA-CUAGGUG-UGGGAUGC------GGAA----------------------------------G-CAUUCCG-UGCC-GUA-GUUAACGCAA-UAA-GUAC-CCCGCCUG-GGGAGUACGGCC-GCAA-GGUU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCAGGGC-UUGACA-UG------------C-AGGUA-----GU-AG-C-G-AGCC-GAAA-G-GU-G-AGCG-ACCCGG-CACUCAAGUGGGCAUGAUAG-------------------AGAAGGUAGUAAGAGGGAGA------------------------------------AUGAAGUGCCUACUUGAGUGCCGGG---AG-CCU-G-CA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-CU--UCUAG---U-U-GC-C-AG-UC--C--GUCACUCACCUGAACAUGUUAGGAAAGAGUAGAGAGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGGAUAGCGUGUUCAGUUGAGUGA---C-GGAGG-CACU-C-U-AGA-GGGAC-U-GCCG-UG-G-A-CAA-CAC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CUAUAUG--CC-C-U-GGGCCACACACGUGCUACAAUGG-CCGGUA--C-AGA-GGGA-G-GC-G-A-A-GCCG-CG-AGGC-G-----------GA-G-CGGA-ACC-CA-A-AAAGCCG-GUC-CAAGUUCGGA-UUGCAGGC-U-GCAACUC-GCCUGCA-UGAAGUCGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCACGAGA-GUCUGCAACACCC-GAAG-CCGG-UGA-C-CC-AA-CCCGGCACUCAAGUGGGCAUG---UUAG-AAACGUGAUGAAGAGAAAAAAA---------CGUGCCCACUUGAGUGCCGGGGGG-G-AGCCGU-CGAAGGUGGGGCAGA-UG-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAUCGGAAGGUG-CGGC-UGGAUCACCUCCUUU----------------------------------------------------------------------------------------
+>ThmTher4 Thermus thermophilus 3
+---------------------------------UUGUUGGAGAGUUU-GAU-CCUGGCUCAGGGUGAAC-GC-UGGC-GGC-G-UG--C-CUAAGACAU-GCAAGU-CGU-GCGG-GC---CGC-----------------------------------------------GGGGU----------------------------------UUU-----------------------------------ACUCC--------------------------------------------------GUG--GU--CAG-CGG-C-GG--A-CGGGUGAGU---AAC-GCGUGGG-UGA--CCU-AC-CCGGAAGA-GG--GGGAC-AA-CCCGG-G-GAAA-CUC-GGG-CUAAUCCC-C-CAU-GU---G-G-ACC-C--G-----CCC---------------------------------------------------------------------------------------------C-UUG------------------------------------------------------------------------------------GGG-------U--GU-GUC-CAAA--GG-G-C-------------------UUU-------------------GC-CC-G--C----------UU----------CCGG---AUG-G-GCCCGCGU-CCC--A------UC-A-G-CU-A-G---UUGGUG-GG-G-UAAU-GG-CCCACCAA-GGCG-ACG-ACGGGUAGCCGGUCU-G-AG-------------A-GGAU-GGCC-GGCCACAGGGGCA-CUGA-GA-CACG-GGCCCCA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UUAGG-AAUCUUCCG--------------------CAA-UGGGC-GCAA-GCCUGACGGAGCGACGCCGCU-UGG-AG-GA-AGAA-GCCC--UU-CG-GG-GUGUAAA------------------------CUCCUGAA--C-CCGG-GAC-G--A-A-AC---CC-CC-----------------G-AC-GA-------------GG-GGA-CU-GA-CGGU-A-C-CG--G-GGU---------AA-U-AGC-GCC-GGCCAAC-UCCGU---GCCAGCAGCCG-CGGUAAU-AC-GGAG-GGCGCG-A-GCG-UUACC-CGGAUUCACUGGGCGUAAAGGGCGUG-UAG-G-CGGCCU-GGGGCG-UCCC-AUGUG-AAA-GA-CCACGG-CUC-AA-CCGUGG-GGG-A-------------------------------------------GC-G-U----------------------------------------------GGGA-UAC-GCUCA-GGC-U-A-G-AC-GG-----UGGGAG-AGGGU-GGU-GGAAUU-CCC--------------------GGA-GUA-GCG-GUGAAA-UG-C-GCAGAU-ACCGGGAGG-AAC-G-CCGA--U-G-GCGAAGGCAG--CCACCUG------GUCCA--------------------------------------------------------------CCC-GU--GACG-----CUGA-GG--CGCGAAA-G-C-GUGGG-GAGC-AAACCGG-AUUAGAUAC-----CCGGGUAG-UCCAC-GCCCUAAACGAUG-CGCG-CUAGGUC-UCUGGG--------UCU--------------------------------------CCUGGG-GGCC-GAA-GCUAACGCGU-UAA-GCGC-GCCGCCUG-GGGAGUACGGCC-GCAA-GGCU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCAGGCC-UUGACA-UG------------C-UAGGG------A-AC-C-C-GGGU-GAAA-G-CC-U-GGGG--UGCC---C------------------------------------------GCGA-----------------------------------------------------------------G--GGAG---CC-CUA-G-CA--------------------------------------------------CAGGU-GCUGCAUGGCCGUCGUCA-GCUCGUGCC-GUGA-GGUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CCCG-CC--GUUAG---U-U-GC-C-AG-CG--G--U-----------------------------UCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-CCGGG-CACU-C-U-AAC-GGGAC-U-GCCC-GC-G-A--AA-GCG-G--GAGG-A-AGG-A-GGGG-ACGACGUC--UGGUCAGCAU-G-GC-CCUUACG--GC-C-U-GGGCGACACACGUGCUACAAUGC-C--CUA--C-AAA-GCGA-U-GC-C-A-C-CCGG-CA-ACGG-G-----------GA-G-CUAA-UCG-CA-A-AAAGGUG-GGC-CCAGUUCGGA-UUGGGGUC-U-GCAACCC-GACCCCA-UGAAGCCGGAAU-CGCUAGUA-AUCGC-GGA-UC-AGCCAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACG--CCAUGGGA-GCGGGCUCUACCC-GAAG-UCGC-CGG-G----AG-CC----------------------------------UAC-G--------------------------------------GG----C-AGGCGC-CGAGGGUAGGGCCCG-UG-ACU-GGGGCG-AAGUCGUAACAAGGUAGCUGUACCGGAAGGUG-CGGC-UGGAUCACCUCCUUU----------------------------------------------------------------------------------------
+>ZooRami7 Zoogloea ramigera
+----------------------------------------AGAGUUU-GAU-NNUGGCUCAGAACGAAC-GC-UGGC-GGC-A-GG--C-UUAACACAU-GCAAGU-CGA-ACGC-CC---------------------------------------------------------C----------------------------------GCAA----------------------------------G-----------------------------------------------------------GG--GAG-UGG-C-AG--A-CGGGUGAGU---AAC-GCGUGGG-A-A--UCU-AC-CCAACUCU-AC--GGAAU-AA-CUCAG-G-GAAA-CUU-GUG-CUAAUACC-G-UAU-AC---G----------------CCC---------------------------------------------------------------------------------------------U-UCG------------------------------------------------------------------------------------GGG-----------------GAAA--GA-----------------------UUUA---------------------UC-G--G----------AG----------UUGG---AUG-A-GCCCGCGU-UGG--A------UU-A-G-CU-A-G---UUGGUG-GG-G-UAAA-GG-CCUACCAA-GGCG-ACG-AUCCAUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACAUUGGGA-CUGA-GA-CACG-GCCCAAA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGGC-GCAA-GCCUGAUCCAGCCAUGCCGCG-UGA-GU-GA-UGAA-GGCC--CU-AG-GG-UUGUAAA------------------------GCUCUUUC-AC-CGGU-GAA-G------A--------------------------U-AA------------------------U-GA-CGGU-A-A-CC--G-GAG---------AA-GAAGC-CCC-GGCUAAC-UUCGU---GCCAGCAGCCG-CGGUAAU-AC-GAAG-GGGGCU-A-GCG-UUGUU-CGGAAUUACUGGGCGUAAAGCGCACG-UAG-G-CGGGUA-UUUAAG-UCAG-GGGUG-AAA-UC-CCGGAG-CUC-AA-CUCCGG-AAC-U-------------------------------------------GC-C-U----------------------------------------------UUGA-UAC-UGGGU-ACC-U-A-G-AG-UA-----UGGAAG-AGGUA-AGU-GGAAUU-CCG--------------------AGU-GUA-GAG-GUGAAA-UU-C-GUAGAU-AUUCGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGG--CUUACUG------GUCCA--------------------------------------------------------------UUA-CU--GACG-----CUGA-GG--UGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AAUG-UUAGCCG-UCGGCAUG------CAUG----------------------------------C-AUGUCGG-UGGC-GCA-GCUAACGCAU-UAA-ACAU-UCCGCCUG-GGGAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGCAG-AA-CCUUA-CCAGCCC-UUGACA-UG-------------UCGGUC------G-CG-G-AUUACA-GAGA-U-GU-UUUCCU-UCA-----GU------------------------------------------UAG----------------------------------------------------------------GC----UG---GA-CCGAA-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUCG-CC--CUUAG---U-U-GC-C-AG-CA--U--------------------------------UCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AAG-GGGAC-U-GCCG-GU-G-A-UAA-GCC-GA-GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUACG--GG-C-U-GGGCUACACACGUGCUACAAUGG-UGGUGA--C-AGU-GGGC-A-GC-G-A-G-ACAG-CG-AUGU-C-----------GA-G-CUAA-UCU-CC---AAAAGCC-AUC-UCAGUUCGGA-UUGCACUC-U-GCAACUC-GAGUGCA-UGAAGUUGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUUGGUUUUACCC-GAAG-GCGA-UGC-G-CU-AA-CC----------------------------------GCA-A--------------------------------------GGAGG-C-AGUCGA-CCACGGUAGGGUCAG-CG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCCUU-----------------------------------------------------------------------------------------
+>PsuFlave Pseudomonas flavescens
+---------------------------------------GAGAGUUU-GAU-CCUGGCUCAGAUUGAAC-GC-UGGC-GGC-A-GG--C-CUAACACAU-GCAAGU-CGA-GCG--GUUG-AGG------------------------------------------------GGAG----------------------------------CUUG----------------------------------CUCCC--------------------------------------------------UGA--UU--CAG-CGG-C-GG--A-CGGGUGAGU---AAU-GCCUAGG-A-A--UCU-GC-CUAUUAGU-GG--GGGAC-AA-CGUUU-C-GAAA-GGA-ACG-CUAAUACC-G-CAU-AC---G----------------UUU---------------------------------------------------------------------------------------------U-ACG------------------------------------------------------------------------------------GGA-----------------GAAA--GU-A-GG-G-GA-C-C---------UUCG-----------GG---CCUU-GC-G--C----------UA----------AUAG---AUG-A-GCCUAGGU-CGG--A------UU-A-G-UU-A-G---UUGGUG-GG-G-UAAA-GG-CUCACCAA-GGCG-ACG-AUCCGUAACUGGUCU-G-AG-------------A-GGAU-GAUC-AGUCACACUGGAA-CUGA-GA-CACG-GUCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGGC-GAAA-GCCUGAUCCAGCCAUGCCGCG-UGU-GU-GA-AGAA-GGUC--UU-CG-GA-UUGUAAA------------------------GCACUUUA-AG-UUGG-GAG-G------AA-GGGC-AGUAAG-------C-----G-AA-UA----C---CU-UGCU-GUU-UU-GA-CGUU-A-C-CG--A-CAG---------AA-UAAGC-ACC-GGCUAAC-UCUGU---GCCAGCAGCCG-CGGUAAU-AC-AGAG-GGUGCA-A-GCG-UUAAU-CGGAAUUACUGGGCGUAAAGCGCGCG-UAG-G-UGGUUU-GUUAAG-UUGG-AUGUG-AAA-GC-CCCGGG-CUC-AA-CCUGGG-AAC-U-------------------------------------------GC-A-U----------------------------------------------CCAA-AAC-UGGCA-AGC-U-A-G-AG-UA-----CGGUAG-AGGGU-GGU-GGAAUU-UCC--------------------UGU-GUA-GCG-GUGAAA-UG-C-GUAGAU-AUAGGAAGG-AAC-A-CCAG--U-G-GCGAAGGCGA--CCACCUG------GACUG--------------------------------------------------------------AUA-CU--GACA-----CUGA-GG--UGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-UCAA-CUAGCCG-UUGGAAUC-----CUUGA----------------------------------G-AUUUUAG-UGGC-GCA-GCUAACGCAU-UAA-GUUG-ACCGCCUG-GGGAGUACGGCC-GCAA-GGUU-AAA-ACUC-AAA-UGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCUGGCC-UUGACA-UG--------------CUGAG------A-AC-U-U-UCCA-GAGA-U-GG-A-UUGG--UG-----CC-----------------------------------------UUCG----------------------------------------------------------------GG----AA---CU-CAG-A-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGUAAC-GAGCGCAACC-CUUG-UC--CUUAG---U-U-AC-C-AG-CA--C-------------------------------GUUAUG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUGGG-AACU-C-U-AAG-GAGAC-U-GCCG-GU-G-A-CAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCAUCAU-G-GC-CCUUACG--GC-C-AGGGGCUACACACGUGCUACAAUGG-UCGGUA--C-AAA-GGGU-U-GC-C-A-A-GCCG-CG-AGGU-G-----------GA-G-CUAA-UCC-CA-U-AAAACCG-AUC-GUAGUCCGGA-UCGCAGUC-U-GCAACUC-GACUGCG-UGAAGUCGGAAU-CGCUAGUA-AUCGU-GAA-UC-AG-AAU-GUCACGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUGGGUUGCACCA-GAAG-UAGC-UAG-U-CU-AA-CC----------------------------------UUC-G--------------------------------------GGGGG-A-CGGUUA-CCACGGUGUGAUUCA-UG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCCU------------------------------------------------------------------------------------------
+>VibFurn2 Vibrio furnisii
+----------------------------------------AGAGUUU-GAU-NNUGGCUCAGAUUGAAC-GC-UGGC-GGC-A-GG--C-CUAACACAU-GCAAGU-CGA-GCG--GCAG-CGA---------CAACA-------------------------------UUGAACC----------------------------------UUCG----------------------------------GGGGAUUUGUUG-----------------------------------------G-GCG--GC--GAG-CGG-C-GG--A-CGGGUGAGU---AAU-GCCUGGG-A-A--AUU-GC-CCUGAUGU-GG--GGGAU-AA-CCAUU-G-GAAA-CGA-UGG-CUAAUACC-G-CAU-GA---U----------------AGC---------------------------------------------------------------------------------------------U-UCG------------------------------------------------------------------------------------GCU-----------------CAAA--GA-G-GG-G-GA-C-C---------UUCG-----------GG---CCUC-UC-G--C----------GU----------CAGG---AUA-U-GCCCAGGU-GGG--A------UU-A-G-CU-A-G---UUGGUG-AG-G-UAAG-GG-CUCACCAA-GGCG-ACG-AUCCCUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACACUGGAA-CUGA-GA-CACG-GUCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCA--------------------CAAU-GGGC-GCAA-GCCUGAUGCAGCCAUGCCGCG-UGU-AU-GA-AGAA-GGCC--UU-CG-GG-UUGUAAA------------------------GUACUUUC-AG-CAGU-GAG-G------AA-GGGG-AUAUCG-------U-----U-AA-UA----G---CG-GUAU-UCU-UU-GA-CGUU-A-G-CU--G-CAG---------AA-GAAGC-ACC-GGCUAAC-UCCGU---GCCAGCAGCCG-CGGUAAU-AC-GGAG-GGUGCG-A-GCG-UUAAU-CGGAAUUACUGGGCGUAAAGCGCAUG-CAG-G-UGGUUU-GUUAAG-UCAG-AUGUG-AAA-GC-CCGGGG-CUC-AA-CCUCGG-AAU-U-------------------------------------------GC-A-U----------------------------------------------UUGA-AAC-UGGCA-GGC-U-A-G-AG-UA-----CUGUAG-AGGGG-GGU-AGAAUU-UCA--------------------GGU-GUA-GCG-GUGAAA-UG-C-GUAGAG-AUCUGAAGG-AAU-A-CCGG--U-G-GCGAAGGCGG--CCCCCUG------GACAG--------------------------------------------------------------AUA-CU--GACA-----CUCA-GA--UGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-UCUA-CUUGGAG-GUUGUGGC-----CUUGA----------------------------------G-CCGUGGC-UUUC-GGA-GCUAACGCGU-UAA-GUAG-ACCGCCUG-GGGAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-UGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AUGCAACG-CGAAG-AA-CCUUA-CCUACUC-UUGACA-UC--------------CAGAG------A-AC-U-U-AGCA-GAGA-U-GC-U-UUGG--UG-----CC-----------------------------------------UUCG----------------------------------------------------------------GG----AA---CU-CUG-A-GA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUU-GUGA-AAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUA-UC--CUUGU---U-U-GC-C-AG-CG--A-------------------------------GUAAUG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCGGG-AACU-C-C-AGG-GAGAC-U-GCCG-GU-G-A-UAA-ACC-G--GAGG-A-AGG-U-GGGG-ACGACGUC--AAGUCAUCAU-G-GC-CCUUACG--AG-U-A-GGGCUACACACGUGCUACAAUGG-CGCAUA--C-AGA-GGGC-A-GC-C-A-A-CUUG-CG-AAAG-U-----------GA-G-CGAA-UCC-CA-A-AAAGUGC-GUC-GUAGUCCGGA-UUGGAGUC-U-GCAACUC-GACUCCA-UGAAGUCGGAAU-CGCUAGUA-AUCGU-GGA-UC-AG-AAU-GCCACGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUGGGCUGCAAAA-GAAG-CAGG-UAG-U-UU-AA-CC----------------------------------UUC-G--------------------------------------GGAGG-A-CGCUUG-CCACUUUGUGGUUCA-UG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCGCUAGGGGAACCUG-GCGC-UGGAUCACCUCCUUU----------------------------------------------------------------------------------------
+>ParDenit Paracoccus denitrificans
+----------------------------------------AGAGUUU-GAU-NNUGGCUCAGAACGAAC-GC-UGGC-GGC-A-GG--C-CUAACACAU-GCAAGU-CGA-GCGC-AC--------------------------------------------------------CC----------------------------------UUCG----------------------------------GG----------------------------------------------------------GU--GAG-CGG-C-GG--A-CGGGUGAGU---AAC-GCGUGGG-A-A--UAU-GC-CCUUUGGU-AC--GGAAU-AG-UCCUG-G-GAAA-CUG-GGG-GUAAUACC-G-UAU-GC---G----------------CCC---------------------------------------------------------------------------------------------U-UCG------------------------------------------------------------------------------------GGG-----------------GAAA--GA-----------------------UUUA---------------------UC-G--C----------CA----------AAGG---AUU-A-GCCCGCGU-UGG--A------UU-A-G-GU-A-G---UUGGUG-GG-G-UAAU-GG-CCUACCAA-GCCG-ACG-AUCCAUAGCUGGUUU-G-AG-------------A-GGAU-GAUC-AGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUCUUAGA--------------------CAAU-GGGG-GCAA-CCCUGAUCUAGCCAUGCCGCG-UGA-GU-GA-UGAA-GGCC--CU-AG-GG-UUGUAAA------------------------GCUCUUUC-AG-CUGG-GAA-G------A--------------------------U-AA------------------------U-GA-CGGU-A-C-CA--G-CAG---------AA-GAAGC-CCC-GGCUAAC-UCCGU---GCCAGCAGCCG-CGGUAAU-AC-GGAG-GGGGCU-A-GCG-UUGUU-CGGAAUUACUGGGCGUAAAGCGCACG-UAG-G-CGGACC-GGAAAG-UUGG-GGGUG-AAA-UC-CCGGGG-CUC-AA-CCCCGG-AAC-U-------------------------------------------GC-C-U----------------------------------------------UCAA-AAC-UAUCG-GUC-U-G-G-AG-UU-----CGAGAG-AGGUG-AGU-GGAAUU-CCG--------------------AGU-GUA-GAG-GUGAAA-UU-C-GUAGAU-AUUCGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGG--CUCACUG------GCUCG--------------------------------------------------------------AUA-CU--GACG-----CUGA-GG--UGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AAUG-CCAGUCG-UCGGGCAG------CAUG----------------------------------C-UGUUCGG-UGAC-ACA-CCUAACGGAU-UAA-GCAU-UCCGCCUG-GGGAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGCAG-AA-CCUUA-CCAACCC-UUGACA-UC--------------CCAGG------A-CC-G-G-CCCG-GAGA-C-GG-G-UCUU--UC-----AC-----------------------------------------UUCG----------------------------------------------------------------GU----GA---CC-UGG-A-GA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UCGG-UUAA-GU-CCGGCAAC-GAGCGCAACC-CACA-CU--CUUAG---U-U-GC-C-AG-CA--U--------------------------------UUGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AAG-AGAAC-U-GCCG-AU-G-A-UAA-GUC-G--GAGG-A-AGG-U-GUGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUACG--GG-U-U-GGGCUACACACGUGCUACAAUGG-UGGUGA--C-AGU-GGGU-------------------------------------------UAA-UCC-CC---AAAAGCC-AUC-UCAGUUCGGA-UUGGGGUC-U-GCAACUC-GACCCCA-UGAAGUUGGAAU-CGCUAGUA-AUCGC-GGA-AC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUUGGGUCUACCC-GACG-GCCG-U-GCG-CU-AA-CCA---------------------------------GCA-A-------------------------------------UGGGGG-C-AGCGGA-CCACGGUAGGCUCAG-CG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCCUUNNN--------------------------------------------------------------------------------------
+>HelPyl22 Helicobacter pylori
+----------AAAAGAGCUUUAGGACAAACACUUUUAUGGAGAGUUU-GAU-CCUGGCUCAGAGUGAAC-GC-UGGC-GGC-G-UG--C-CUAAUACAU-GCAAGU-CGA-ACGA-UG---AAG-------------C--------------------------------UUCUAG----------------------------------CUUG----------------------------------CUAGAAUG-----------------------------------------------CUG--AU--UAG-UGG-C-GC--A-CGGGUGAGU---AAC-GCAUAGG-UUA--UGU-GC-CUCUUAGU-UU--GGGAU-AG-CCAUU-G-GAAA-CGA-UGA-UUAAUACC-A-GAU-AC---U----------------CCC---------------------------------------------------------------------------------------------U-ACG------------------------------------------------------------------------------------GGG-----------------GAAA--GA-----------------------UUUA---------------------UC-G--C----------UA----------AGAG---AUC-A-GCCUAUGU-CCU--A------UC-A-G-CU-U-G---UUGGUA-AG-G-UAAU-GG-CUUACCAA-GGCU-AUG-ACGGGUAUCCGGCCU-G-AG-------------A-GGGU-GAAC-GGACACACUGGAA-CUGA-GA-CACG-GUCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UAGGG-AAUAUUGCU--------------------CAAU-GGGG-GAAA-CCCUGAAGCAGCAACGCCGCG-UGG-AG-GA-UGAA-GGUU--UU-AG-GA-UUGUAAA------------------------CUCCUUUU-GU-UAGA-GAA-G------A--------------------------U-AA------------------------U-GA-CGGU-A-U-CU--A-ACG---------AA-UAAGC-ACC-GGCUAAC-UCCGU---GCCAGCAGCCG-CGGUAAU-AC-GGAG-GGUGCA-A-GCG-UUACU-CGGAAUCACUGGGCGUAAAGAGCGCG-UAG-G-CGGGAU-AGUCAG-UCAG-GUGUG-AAA-UC-CUAUGG-CUU-AA-CCAUAG-AAC-U-------------------------------------------GC-A-U----------------------------------------------UUGA-AAC-UACUA-UUC-U-A-G-AG-UG-----UGGGAG-AGGUA-GGU-GGAAUU-CUU--------------------GGU-GUA-GGG-GUAAAA-UC-C-GUAGAG-AUCAAGAGG-AAU-A-CUCA--U-U-GCGAAGGCGA--CCUGCUG------GAACA--------------------------------------------------------------UUA-CU--GACG-----CUGAUUG--CGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCCUAAACGAUG-GAUG-CUAGUUG-UUGGAGGG-----CUUAG-U--------------------------------C-UCUCCAG-UAAU-GCA-GCUAACGCAU-UAA-GCAU-CCCGCCUG-GGGAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUAG-ACGGGGA-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGAUACA-CGAAG-AA-CCUUA-CCUAGGC-UUGACA-UU--------------GAGAG------A-AU-C-C-GCUA-GAAA-U-AG-U-GGAG-UGUCU---GG-----------------------------------------CUUG----------------------------------------------------------------CC--AGAC---CU-UGA-A-AA--------------------------------------------------CAGGU-GCUGCACGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CCCU-UU--CUUAG---U-U-GC-U-AA-CA--G-------------------------------GUCAUG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CUGAG-AACU-C-U-AAG-GAUAC-U-GCCU-CC-G---UAA-GGA-G--GAGG-A-AGG-U-GGGG-ACGACGUC--AAGUCAUCAU-G-GC-CCUUACG--CC-U-A-GGGCUACACACGUGCUACAAUGG-GGUGCA--C-AAA-GAGA-A-GC-A-A-U-ACUG-CG-AAGU-G-----------GA-G-CCAA-UCU-UC---AAAACAC-CUC-UCAGUUCGGA-UUGUAGGC-U-GCAACUC-GCCUGCA-UGAAGCUGGAAU-CGCUAGUA-AUCGC-AAA-UC-AGCCAU-GUUGCGGUG-AAU-ACGUU-CCCGGGUCUUGUA----CUCACCGCCCGUC-ACA--CCAUGGGA-GUUGUGUUUGCCU-UAAG-UCAG-GAU-G-CU-AA-------------------------------------AUU-------------------------------------------AG-C-UACUGC-CCACGGCACACACAG-CG-ACU-GGGGUG-AAGUCGUAACAAGGUAACCGUAGUGACACCUG-CGGU-UGGAUCACCUCCUUUCU--------------------------------------------------------------------------------------
+>SarLytic Sarcobium lyticum
+----------------------------------------AGAGUUU-GAU-NNUGGCUCAGAUUGAAC-GC-UGGC-GGC-A-UG--C-UUAACACAU-GCAAGU-CGA-ACG--GCAG-CAC---------------------------------------------AGUCUAG----------------------------------CUUG----------------------------------CUAGACG----------------------------------------------G-GUG--GC--GAG-UGG-C-GA--A-CGGGUGAGU---AAC-GCGUAGG-A-A--UAU-AC-CUUGAAGA-GG--GGGAC-AA-CUUGG-G-GAAA-CUC-AAG-CUAAUACC-G-CAU-AA---U----------------GUC---------------------------------------------------------------------------------------------U-GAG------------------------------------------------------------------------------------GAC-----------------GAAA--GC-C-GG-G-GA-C-C---------GUAA-----------GG---CCUG-GC-G--C----------UU----------UAAG---AUU-A-GCCUGCGU-CCG--A------UU-A-G-CU-A-G---UUGGUA-GG-G-UAAA-GG-CCUACCAA-GGCG-ACG-AUCGGUAGCUGGUCU-G-AG-------------A-GGAU-GACC-AGCCACACUGGAA-CUGA-GA-CACG-GUCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGGG-GCAA-CCCUGAUCCAGCAAUGCCGCG-UGU-GU-GA-AGAA-GGCC--UG-AG-GG-UUGUAAA------------------------GCACUUUC-AG-UGGG-GAG-G------AG-GCUU-GUUAGG-------U-----U-AA-GA----G---CU-AGAU-AAG-UG-GA-CGUU-A-C-CC--A-CAG---------AA-GAAGC-ACC-GGCUAAC-UCCGU---GCCAGCAGCCG-CGGUAAU-AC-GGAG-GGUGCA-A-GCG-UUAAU-CGGAAUUACUGGGCGUAAAGAGUGCG-UAG-G-UGGUUU-GGUAAG-UUAU-CUGUG-AAA-UC-CCUGGG-CUC-AA-CCUGGG-CAG-G-------------------------------------------UC-A-G----------------------------------------------AUAA-UAC-UGCUG-AAC-U-C-G-AG-UA-----UGGGAC-AGGGU-AGU-GGAAUU-UCC--------------------GGU-GUA-GCG-GUGAAA-UG-C-GUAGAG-AUCGGAAGG-AAC-A-CCAG--U-G-GCGAAGGCGG--CUACCUG------GCCUA--------------------------------------------------------------AUA-CU--GACA-----CUGA-GG--CACGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-UCAA-CUAGCUG-UUGGUUAU-----AUGAA-U--------------------------------A-UAAUUAG-UGGC-GCA-GCAAACGCGA-UAA-GUUG-ACCGCCUG-GGGAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AUGCAACG-CGAAG-AA-CCUUA-CCUACCC-UUGACA-UA--------------CAGUG------A-AC-U-U-UGCA-GAGA-U-GC-A-UUGG--UG-----CC-----------------------------------------UUCG----------------------------------------------------------------GG----AA---CA-CUG-A-UA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGUAAC-GAGCGCAACC-CUUA-UU--GUUAG---U-U-GC-C-AG-CG--C--G-----------------------------UAAU--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-GCGGG-AACU-C-U-AAU-GAGAC-U-GCCG-GU-G-A-CAA-ACC-G--GAGG-A-AGG-C-GGGG-ACGACGUC--AAGUCAUCAU-G-GC-C-UUACG--GG-U-A-GGGCUACACACGUGCUACAAUGG-UUGAUA--C-AGA-GGGA-A-GC-G-A-A-GGAG-CG-AUCU-G-----------GA-G-CCAA-UCU-UA-C-AAAGUCA-AUC-GUAGUCCGGA-UUGGAGUC-U-GCAACUC-GACUCCA-UGAAGUCGGAAU-CGCUAGUA-AUCGC-GAA-UC-AG-CAU-GUCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUGGGCUGCACCA-GAAG-UAGA-UAG-U-CU-AA-CC----------------------------------GCA-A--------------------------------------GGGGG-A-CGUUUA-CCACGGUGUGGUUCA-UG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCCUNN----------------------------------------------------------------------------------------
+>PsuAeru5 Pseudomonas aeruginosa 2
+---------------------------------GAACUGAAGAGUUU-GAU-CAUGGCUCAGAUUGAAC-GC-UGGC-AGC-AGGG-CCUUCAACACAU-GCAAGU-CGA-GCU--UAU--GAA-----------------------------------------------GGGAG----------------------------------CUUG----------------------------------C-CU-------------------------------------------------U-GGA--UU--CAG-CGG-C-GG--A-CGGGUGAGU---AAU-GCCUAGG-A-A--UCU-GC-CUGGUAGU-GG--GGGAU-AA-CGUCC-G-GAAA-CGG-CCG-CUAAUACC-G-CAU-AC---G----------------UCC---------------------------------------------------------------------------------------------U-GAG------------------------------------------------------------------------------------GGA-----------------GAAA--GU-C-GG-G-GA-U-C---------UUCG-----------GA---CCUC-AC-G--C----------UA----------UCAG---AUG-A-GCCUAGGU-CGG--A------UU-A-G-CU-A-G---UUGGUG-GG-G-UAAA-GG-CCUACCAA-GGCG-ACG-AUCCGUAACUGGUCU-G-AG-------------A-GGAU-GAUC-AGUCACACUGGAA-CUGA-GA-CACG-GUCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGGC-GCAA-GCCUGAUCCAGCCAUGCCGCG-UGU-GU-GA-AGAA-GGUC--UU-CG-GA-UUGUAAA------------------------GCACUUUA-AG-UUGG-GAG-G------AA-GGGC-AGUAAG-------U-----U-AA-UA----C---CU-UGCU-GU--UU-GA-CGUU-A-C-CA--A-CAG---------AA-UAAGC-ACC-GGCUAAC-UUCGU---GCCAGCAGCCG-CGGUAAU-AC-GAAG-GGUGCA-A-GCG-UUAAU-CGGAAUUACUGGGCGUAAAGCGCGCG-UAA-G-UGGUUC-AGCAAG-CUUG-AUGUG-AAA-UC-CCCGGG-CUC-AA-CCUGGG-AAC-U-------------------------------------------GC-A-U----------------------------------------------CCAA-AAC-UACUG-AGC-U-A-G-AG-UA-----CGGUAG-AGG-U-GGU-AGAAUU-UCC--------------------UGU-GUA-GCG-GUGAAA-UG-C-GUAGAU-AUAGGAAGG-AAC-A-CCAG--U-G-GCGAAGGCGA--CCACCUG------GACUG---------------------------------------------------------------UA-CU--GACA-----CUGA-GG--UGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-UCGA-CUAGCCG-UUGGGAUC-----CUUGA----------------------------------G-AUCUUAG-UGGC-GCA-CGUAACGCGA-UAA-GUCG-ACCGCCUG-GGGAGUACGGCC-GCAA-GGUU-AAA-ACUC-AAA-UGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCUGGCC-UUGACA-UG--------------CUGAG------A-AC-U-U-UCCA-GAGA-U-GG-A-UUGG--UG-----CC-----------------------------------------UUCG----------------------------------------------------------------GG----AA---CA-GAG-A-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGUAAC-GAGCGCAACC-CUUG-UC--CUUAG---U-U-AC-C-AG-CA--C--C-----------------------------UCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-GUGGG-CACU-C-U-AAG-GAGAC-U-GCCG-GU-G-A-CAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCAUCAU-G-GC-CCUUACG--GC-C-A-GGGCUACACACGUGCUACAAUGG-UCGGUA--C-AAA-GGGU-U-GC-C-A-A-GCCG-CG-AGUG-G-----------GA-G-CUAA-UCC-CA-U-AAAACCG-AUC-GUAGUCCGGA-UCGCAGUC-U-GCAACUC-GACUGCG-UGAAGUCGGAAU-CGCUAGUA-AUCGU-GAA-UC-AG-AAU-GUCACGGUG-AAU-ACGUC-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUGGGUUGCUCCA-GAAG-UAGC-UAG-U-CU-AA-CC----------------------------------GCA-A--------------------------------------GGGGG-A-CGGUUA-CCACGGAGUGAUUCA-UG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCCUUA----------------------------------------------------------------------------------------
+>PriModes Propionigenium modestum
+-----------------------------------AAUGAAGAGUUU-GAU-CCUGGCUCAGGAUGAAC-GC-UGAC-AGA-A-UG--C-UUAACACAU-GCAAGU-CG--ACUG-GA---AUU------------------------------------------------CACC----------------------------------UUCG----------------------------------GGUG-------------------------------------------------A-UAG--UA--CGG-UGG-C-GG--A-CGGGUGAGU---AAC-GCGUAAA-GAA--CUU-GC-CCUCUAGA-CU--GGGAC-AA-CUGUU-G-GAAA-CGA-CAG-CUAAUACC-G-GAU-AU---U-A-UGG-A--C-CC--CUG---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------CUG--G-G--G--AC-UAU-GAAA-GGC-U---------------------AUA--------------------U-GC-G--C----------UA----------GAGG---AGA-G-CUUUGCGU-CCC--A------UU-A-G-CU-A-G---UUGGUA-GG-G-UAAU-GG-CCUACCAA-GGCG-ACG-AUGGGUAGCCGGCCU-G-AG-------------A-GGGU-GAUC-GGCCACAAGGGGA-CUGA-GA-CACG-GCCCUUA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGACCAAAA-GUCUGAUCCAGCAAUUCUGUG-UGC-AC-GA-UGAA-GGUC--UU-CG-GA-UUGUAAA------------------------GUGCUUUC-AG-CAGG-GAA-G--A---A--------------------------G-CA-AG---------------------U-GA-CGGU-A-C-CU--G-CAG---------AA-GAAGC-GAC-GGCUAAA-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAU-GUCGCA-A-GCG-UUAUC-CGGAAUUAUUGGGCGUAAAGCGCGUC-UAG-G-CGGCCU-AUUAAG-UCUG-AUGUU-AAA-AU-GCGGGG-CUC-AA-CUCCGU-AU--U-------------------------------------------GC-G-U----------------------------------------------UGGA-AAC-UGGUA-GGC-U-A-G-AG-UA-----UCAGAG-AGGUG-GGC-GGAACU-ACA--------------------AGU-GUA-GAG-GUGAAA-UU-C-GUAGAU-AUUUGUAGG-AAU-G-CCGA--U-G-GGGAAGCCAG--CUCACUG------GAUGA--------------------------------------------------------------AUA-CU--GAGC-----CUGA-AG--CGCGAAA-G-C-GUGGG-GAGC-AAACGGG-AUUAGAUAC-----CCCGGUAG-UCCAC-GCCGUAAACGAUG-AUCA-CUAAGUG-UGGGGGG-------UCGA------------------------------------ACCUCCG-UGCU-CAA-CGUAACGCGA-UAA-GUGA-UCCGCCUG-GGGAGUACGUAC-GCAA-GUAU-GAA-ACUC-AAA-GGAAUUG-ACGGGGA-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-ACGCAACG-CGAGG-AA-CCUUA-CCAGCCC-UUGACA-UC--------------CCAAG------A-AC-U-U-AGCA-GAGA-U-GC-U-UUGG--UGCC---U------------------------------------------UUCG----------------------------------------------------------------GG--GGAA---CU-UGG-U-GA--------------------------------------------------CAGGU-GGUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CCUA-UC--GUAUG---U-U-AC-C-AU-CA--U--------------------------------UAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-GACU-C-A-UGC-GAGAC-U-GCCU-GC-G-A-CGA-GCA-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCAUCAU-G-CC-CCUUAUG--GG-C-U-GGGCUACACACGUGCUACAAUGG-ACAGUA--C-AGA-GAGU-C-GC-G-A-U-CCCG-CG-AGGG-G-----------GA-G-CCAA-UCU-CA-G-AAAGCUG-UUC-UUAGUUCGGA-UCGCAGUC-U-GCAACUC-GACUGCG-UGAAGUUGGAAU-CGCUAGUA-AUCGC-GAA-UC-AGCAAU-GUCGCG-UG-AAU-ACGUU-CUCGGGUCUUGUA----CACACCGCCCGUC-ACA--CCACGAGA-GUUGGUUGCACCU-GAAG-UAGC-AGG-C-CU-AA-CCC---------------------------------UUC-G-------------------------------------GGGAGG-G-AUGUUC-CUAAGGUGUGAUUAG-CG-AUU-GGGGUG-AAGUCGUAACAAGGUAUCCGUACGGGAACGUG-CGGA-UGGAUCACCUCCUUUCU--------------------------------------------------------------------------------------
+>BodBron2 Bordetella bronchiseptica
+--------------------------------UGAACUGAAGAGUUU-GAU-CCUGGCUCAGAUUGAAC-GC-UGGC-GGG-A-UG--C-UUUACACAU-GCAAGU-CGG-ACG--GCAG-CAC------------------------------------------------GGGC----------------------------------UUCG----------------------------------GCCU-------------------------------------------------G-GUG--GC--GAG-UGG-C-GA--A-CGGGUGAGU---AAU-GUAUCGG-A-A--CGU-GC-CCAGUAGC-GG--GGGAU-AA-CUACG-C-GAAA-GCG-UGG-CUAAUACC-G-CAU-AC---G----------------CCC---------------------------------------------------------------------------------------------U-ACG------------------------------------------------------------------------------------GGG-----------------GAAA--GC-G-GG-G-GA-C-C---------UUCG-----------GG---CCUC-GC-A--C----------UA----------UUGG---AGC-G-GCCGAUAU-CGG--A------UU-A-G-CU-A-G---UUGGUG-GG-G-UAAC-GG-CCUACCAA-GGCG-ACG-AUCCGUAGCUGGUUU-G-AG-------------A-GGAC-GACC-AGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUUUUGGA--------------------CAAU-GGGG-GCAA-CCCUGAUCCAGCCAUCCCGCG-UGU-GC-GA-UGAA-GGCC--UU-CG-GG-UUGUAAA------------------------GCACUUUU-GG-CAGG-AAA-G------AA-ACGG-CACGGG-------C-----U-AA-UA----U---CC-UGUG-CAA-CU-GA-CGGU-A-C-CU--G-CAG---------AA-UAAGC-ACC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GGUGCA-A-GCG-UUAAU-CGGAAUUACUGGGCGUAAAGCGUGCG-CAG-G-CGGUUC-GGAAAG-AAAG-AUGUG-AAA-UC-CCAGGG-CUU-AA-CCUUGG-AAC-U-------------------------------------------GC-A-U----------------------------------------------UUUU-AAC-UACCG-GGC-U-A-G-AG-UG-----UGUCAG-AGGGA-GGU-GGAAUU-CCG--------------------CGU-GUA-GCA-GUGAAA-UG-C-GUAGAU-AUGCGGAGG-AAC-A-CCGA--U-G-GCGAAGGCAG--CCUCCUG------GGAUA--------------------------------------------------------------ACA-CU--GACG-----CUCA-UG--CACGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCCUAAACGAUG-UCAA-CUAGCUG-UUGGGGCC------UUCG----------------------------------G-GCCUUGG-UAGC-GCA-GCUAACGCGU-GAA-GUUG-ACCGCCUG-GGGAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGA-CCC--GC-A--CA-A-GCG-GUGGAU-GA-UGUGGA-UUAAUUC-G-AUGCAACG-CGAAA-AA-CCUUA-CCUACCC-UUGACA-UG--------------UCUGG------A-AU-C-C-CGAA-GAGA-U-UU-G-GGAG--UGC----UC-----------------------------------------GCAA----------------------------------------------------------------GA---GAA---CC-GGA-A-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-UC--AUUAG---U-U-GC-U-A--C------------------------------------GAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGG-CACU-C-U-AAU-GAGAC-U-GCCG-GU-G-A-CAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUAUG--GG-U-A-GGGCUUCACACGUCAUACAAUGG-UCGGGA--C-AGA-GGGU-C-GC-C-A-A-CCCG-CG-AGGG-G-----------GA-G-CCAA-UCC-CA-G-AAACCCG-AUC-GUAGUCCGGA-UCGCAGUC-U-GCAACUC-GACUGCG-UGAAGUCGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GUCGCGGUG-AAU-ACGUU-CCCGGGUCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUGGGUUUUACCA-GAAG-UAGU-UAG-C-CU-AA-CC----------------------------------GCA-A--------------------------------------GGGGG-G-CGAUUA-CCACGGUAGGAUUCA-UG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAUCGGAAGGUG-CGGC-UGGAUCACCUCCUUU----------------------------------------------------------------------------------------
+>LatPonti Lactobacillus pontis
+----------------------------------------AGAGUUU-GAU-NNUGGCUCAGGAUGAAC-GC-CGGC-GGU-G-UG--C-CUAAUACAU-GCAAGU-CGA-GCGC-AC---UGG---CCCAACUGAUA-------------------------------UGACGUG----------------------------------CUUG----------------------------------CACUGAUUUGACGAUGGAU----------------------------------UACCA--GU--GAG-CGG-C-GG--A-CGGGUGAGU---AAC-ACGUGGG-CAA--CCU-GC-CCUGGAGC-GG--GGGAU-AA-CAUUU-G-GAAA-CAG-AUG-CUAAUACC-G-CAU-AA-----U-AAU-C--A-AA--ACC---------------------------------------------------------------------------------------------A-CAU------------------------------------------------------------------------------------GGU--U-U--U--GA-UUU-CAAA--GA-U-GG-C----------------UUCG----------------GCUA-UC-A--C----------UC----------CAGG---AUG-G-GCCCGCGG-UGC--A------UU-A-G-CU-A-G---UUGGUA-AG-G-UAAC-GG-CUUACCAA-GGCG-AUG-AUGCAUAGCCGAGUU-G-AG-------------A-GACU-GAUC-GGCCACAAUGGAA-CUGA-GA-CACG-GUCCAUA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UAGGG-AAUCUUCCA--------------------CAAU-GGGC-GCAA-GCCUGAUGGAGCAACACCGCG-UGA-GU-GA-AGAA-GGGU--UU-CG-GC-UCGUAAA------------------------ACUCUGUU-GU-UGAA-GAA-G--A---AC-GUGC-GUGAGA-------G-----U-AA-C-----U---GU-UCAC-GCA-GU-GA-CGGU-A-U-UC--A-ACC---------AG-AAAGU-CAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GUGGCA-A-GCG-UUAUC-CGGAUUUAUUGGGCGUAAAGCGAGCG-CAG-G-CGGUUA-CUUAAG-UCUG-AUGUG-AAA-CG-CUUCGG-CUU-AA-CCGAAG-AAG-U-------------------------------------------GC-A-U----------------------------------------------CGGA-AAC-UGGGU-GAC-U-U-G-AG-UG-----CAGAAG-AGGAC-AGU-GGAACU-CCA--------------------UGU-GAU-GCG-GUGGAA-UG-C-GUAGAU-AUAUGGAAG-AAC-A-CCAG--U-G-GCGAAGGCGG--CUGUCUG------GUCUG--------------------------------------------------------------CAA-CU--GACG-----CUGA-GG--CUCGAAA-G-C-AUGGG-UAGC-GAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAU-GCCGUAAACGAUG-AGUG-CUAGGUG-UUGGAGGG--U---UUCC---------------------------------GC-CCUUCAG-UGCC-GGA-GCUAACGCAU-UAA-GCAC-UCCGCCUG-GGGAGUACGACC-GCAA-GGUU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCUACG-CGAAG-AA-CCUUA-CCAGGUC-UUGACA-UC--------------UUGCG------C-UA-A-C-CUAA-GAGA-U-UA-G-GCGU--UC-----CC-----------------------------------------UUCG----------------------------------------------------------------GG----GA---CG-CAA-U-GA--------------------------------------------------CAGGU-GGUGCAUGGUCGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-UU--ACUAG---U-U-GC-C-AG-CA--U--------------------------------UCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AGU-GAGAC-U-GCCG-GU-G-A-CAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AGAUCAUCAU-G-CC-CCUUAUG--AC-C-U-GGGCUACACACGUGCUACAAUGG-UCGGUA--C-AAC-GAGU-C-GC-U-A-A-CCCG-CG-AGGG-C-----------AA-G-CUAA-UCU-CU-U-AAAGCCG-AUC-UCAGUUCGGA-CUGUAGGC-U-GCAACUC-GCCUACA-CGAAGUCGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGAA-GUUUGUAACGCCC-AAAG-UCGG-UGG-C-CU-AA-CC----------------------------------AUU-U--------------------------------------GGAGG-G-AGCCGC-CUAAGGCGGGACAGA-UG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGAGAACCUG-CGGC-UGGAUCACCUCCUUUNU--------------------------------------------------------------------------------------
+>EhrBovis Ehrlichia bovis
+-------------------------------GUCGACAACAGAGUUU-GAU-CCUGGCUCAGAACGAAC-GC-UGGC-GGC-A-AG--C-UUAACACAU-GCAAGU-CGA-ACGG-AU---UGU------------UC--------------------------------UCGUAG----------------------------------CUUG----------------------------------CUAUGA-GA----------------------------------------------ACA--AU--UAG-UGG-C-AG--A-CGGGUGAGU---AAU-GCAUAGG-A-A--UCU-AC-CUAGUAGU-AU--AGGAU-AG-CCACU-A-GAAG-UGG-UGG-GUAAUACU-G-UAU-AA---U----------------CCC---------------------------------------------------------------------------------------------U-GCG------------------------------------------------------------------------------------GGG-----------------GAAA--GA-----------------------UUUA---------------------UC-G--C----------UA----------CAUG---AUG-A-GCCUAUGU-UAG--A------UU-A-G-CU-A-G---UUGGUG-GG-G-UAAU-GG-CCUACCAA-GGCA-GUG-AUCUAUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACACUGGAA-CUGA-GA-CACG-GUCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGGC-GCAA-GCCUGAUCCAGCUAUGCCGCG-UGA-GU-GA-GGAA-GGCC--UU-AG-GG-UUGUAAA------------------------ACUCUUUC-AG-UGGG-GAA-G------A--------------------------U-AA------------------------U-GA-CGGU-A-C-CC--A-CAG---------AA-GAAGU-CCC-GGCAAAC-UCCGU---GCCAGCAGCCG-CGGUAAU-AC-GGAG-GGGGCA-A-GCG-UUGUU-CGGAAUUAUUGGGCGUAAAGGGCAUG-UAG-G-UGGUUU-GGUUAG-UUAA-AGGUG-AAA-UG-CCAGGG-CUU-AA-CCCUGG-AGC-U-------------------------------------------GC-U-U----------------------------------------------UUAA-UAC-UGCCA-GAC-U-G-G-AG-UC-----CGGGAG-AGGAU-AGC-GGAAUU-CCU--------------------AGU-GUA-GAG-GUGAAA-UU-C-GUAGAU-AUUAGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGG--CUAUCUG------GUCCG--------------------------------------------------------------GUA-CU--GACA-----CUGA-GG--UGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCUGUAAACGAUG-AGUG-CUGGAUG-UGGGGGU-------UUUU------------------------------------ACCUCCG-UGUU-GUA-GCUAACGCGU-UAA-GCAC-UCCGCCUG-GGGACUACGGUC-GCAA-GACU-AAA-ACUC-AAA-GGAAUUG-ACGGGGA-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AUGCAACG-CGAAA-AA-CCUUA-CCACUCC-UUGACA-UG-------------AAGAUU----A-G-AU-C-C-UCCU-UAAC-A-GG-A-GGGC--GC-----AG-----------------------------------------UUCGG---------------------------------------------------------------CU----G----GG-UCUUG-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGUAACC-CUCA-CC--CUUAG---U-U-GC-C-AG-CG--G-------------------------------GUAAUG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGGG-GACU-U-U-AAG-GGAAC-U-GCCA-GU-G-G-UAA-GCU-G--GAGG-A-AGG-U-GGGG-AUGAUGUC--AAGUCAGCAU-G-GC-CCUUAUG--GG-G-U-GGGCUACACACGUGCUACAAUGG-UGACUA--C-AAU-AGGU-U-GC-A-A-U-GUCG-UA-AGGC-U-----------GA-G-CUAA-UCC-G--UCAAAAGUC-AUC-UUAGUUCGGA-UUGUCCUC-U-GCAACUC-GAGGGCA-UGAAGCAGGAAU-CGCUAGUA-AUCGU-GGA-UC-AG-CAU-GCCACGGUG-AAU-ACGUU-CUCGGGUCUUGUA----CACACUGCCCGUC-ACG--CCAUGGGA-AUUGGCUUAACUC-GAAG-CUGG-UGC-G-CC-AA-CC----------------------------------GUA-A--------------------------------------GGAGG-C-AGCCAU-UUAAGGUUGGGUCAG-UG-ACU-AGGGUG-AAGUCGUAACAAGGUAGCUGUAGGUGAACCUG-CAGA-AGGAUCAAGC--UUGGAUCC-----------------------------------------------------------------------------------
+>SteSali2 Streptococcus salivarius subsp thermophilus
+----------------------------------------AGAGUUU-GAU-CCUGGCUCAGGACGAAC-GG-UGGC-GGC-G-UG--C-CUAAUACAU-GCAAGU-AGA-ACGC-UG---AAG---------------------------------------------AGAGGAG----------------------------------CUUG----------------------------------CUCUUCU------------------------------------------------UGG--AU--GAG-UUG-C-GA--A-CGGGUGAGU---AAC-GCGUAGG-UAA--CCU-GC-CUNGUAGC-GG--GGGAU-AA-CUAUU-G-GAAA-CGA-UAG-CUAAUACC-G-CAU-AA-----C-AAU-G--G-AU--GAC---------------------------------------------------------------------------------------------A-CAU------------------------------------------------------------------------------------GUC--A-U--U--UA-UUU-GAAA--GG-G-GC------------------AAUU-----------------GCU-CC-A--C----------UA----------CAAG---AUG-G-ACCUGCGU-UGU--A------UU-A-G-CU-A-G---UAGGUG-AG-G-UAAU-GG-CUUACCUA-GGCG-ACG-AUACAUAGCCGACCU-G-AG-------------A-GGGU-GAUC-GGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UAGGG-AAUCUUCGG--------------------CAAU-GGGG-GCAA-CCCUGACCGAGCAACGCCGCG-UGA-CU-GA-AGAA-GGUU--UU-CG-GA-UCGUAAA------------------------GCUCUGUU-GU-AAGU-CAA-G--A---AC-GGGU-GUGAGA-------G-----U-GG-AA----A---GU-UCAC-ACA-GU-GA-CGGU-A-G-CU--U-ACC---------AG-AAAGG-GAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GUCCCG-A-GCG-UUGUC-CGGAUUUAUUGGGCGUAAAGCGAGCG-CAG-G-CGGUUU-GAUAAG-UCUG-AAGUU-AAA-GG-CUGUGG-CUC-AA-CCAUAG-UUC---------------------------------------------GC-U-U----------------------------------------------UGGA-AAC-UGUCA-AAC-U-U-G-AG-UG-----CAGAAG-GGGAG-AGU-GGAAUU-CCA--------------------UGU-GUA-GCG-GUGAAA-UG-C-GUAGAU-AUAUGGAGG-AAC-A-CCGG--U-G-GCGAAAGCGG--CUCUCUG------GUCUG--------------------------------------------------------------UAA-CU--GACG-----CUGA-GG--CUCGAAA-G-C-GUGGG-GAGC-GAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AGUG-CUAGGUG-UUGGAUCC--U---UUCC---------------------------------GG-GAUUCAG-UGCC-GCA-GCUAACGCAU-UAA-GCAC-UCCGCCUG-GGGAGUACGACC-GGAA-GGUU-GAA-ACUC-AAA-GGAAUUG-ACGGGGC-CC---GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCACCUC-UUGACA-UC-------------CCGAUG------C-UA-U-U-UCUA-GAGA-U-AG-A-AAGU--U------AC-----------------------------------------UUUG----------------------------------------------------------------GU-----A---CA-UCGGU-GA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CCUA-UU--GUUAG---U-U-GC-C-AU-CA--U--------------------------------UCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AGC-GAGAC-U-GCCG-GU-A-A-UAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--AC-C-U-GGGCUACACACGUGCUACAAUGG-UUGGUA--C-AAC-GAGU-U-GC-G-A-G-UCGG-UG-ACGG-C-----------GA-G-CUAA-UCU-CU-U-AAAGCCA-AUC-UCAGUUCGGA-UUGUAGGC-U-GCAACUC-GCCUACA-UGAAGUCGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAC-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCACGAGA-GUUUGUAACACCC-GAAG-UCGG-UGA-G-GU-AA-CC----------------------------------UUU-U--------------------------------------GGAGC-C-AGCCGC-CUAAGGUGGGACAGA-UG-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGAUCCGGAAGGUG-CGGC-UGGAUCACCUCCUUUNN--------------------------------------------------------------------------------------
+>PsuTesto Comamonas testosteroni
+--------------------------------CGAACUAUAGAGUUU-GAU-CCUGGCUCAGAUUGAAC-GC-UGGC-GGC-A-UG--C-UUUACACAU-GCAAGU-CGA-ACG--GUAA-CAG-------------------------------------------------GUC----------------------------------UUCG----------------------------------GAU--------------------------------------------------G-CUG--AC--GAG-UGG-C-GA--A-CGGGUGAGU---AAU-ACAUCGG-A-A--CGU-GC-CUAGUAGU-GG--GGGAU-AA-CUACU-C-GAAA-GAG-UAG-CUAAUACC-G-CAU-GA---G----------------AUC---------------------------------------------------------------------------------------------U-ACG------------------------------------------------------------------------------------GAU-----------------GAAA--GC-A-GG-G-GA-C-C---------UUCG-----------GG---CCUU-GU-G--C----------UA----------CUAG---AGC-G-GCUGAUGG-CAG--A------UU-A-G-GU-A-G---UUGGUG-GG-G-UAAA-GG-CUUACCAA-GCCU-GCG-AUCUGUAGCUGGUCU-G-AG-------------A-GGAC-GACC-AGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUUUUGGA--------------------CAAU-GGGC-GAAA-GCCUGAUCCAGCAAUGCCGCG-UGC-AG-GA-UGAA-GGCC--CU-CG-GG-UUGUAAA------------------------CUGCUUUU-GU-ACGG-AAC-G------AA-AAGC-CUGGGG-------C-----U-AA-UA----U---CC-CCGG-GUC-AU-GA-CGGU-A-C-CG--U-AAG---------AA-UAAGC-ACC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GGUGCA-A-GCG-UUAAU-CGGAAUUACUGGGCGUAAAGCGUGCG-CAG-G-CGGUUU-UGUAAG-ACAG-UGGUG-AAA-UC-CCCGGG-CUC-AA-CCUGGG-AAC-U-------------------------------------------GC-C-A----------------------------------------------UUGU-GAC-UGCAA-GGC-U-A-G-AG-UG-----CGGCAG-AGGGG-GAU-GGAAUU-CCG--------------------CGU-GUA-GCA-GUGAAA-UG-C-GUAGAU-AUGCGGAGG-AAC-A-CCGA--U-G-GCGAAGGCAA--UCCCCUG------GGCCU--------------------------------------------------------------GCA-CU--GACG-----CUCA-UG--CACGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCCUAAACGAUG-UCAA-CUGGUUG-UUGGGUCU------UAAC----------------------------------U-GACUCAG-UAAC-GAA-GCUAACGCGU-GAA-GUUG-ACCGCCUG-GGGAGUACGGCC-GCAA-GGUU-GAA-ACUC-AAA-GGAAUUG-ACGGGGA-CCC--GC-A--CA-A-GCG-GUGGAU-GA-UGUGGU-UUAAUUC-G-AUGCAACG-CGAAA-AA-CCUUA-CCCACCU-UUGACA-UG--------------GCAGG------A-AC-U-U-ACCA-GAGA-U-GG-U-UUGG--UGC----UC-----------------------------------------GAAA----------------------------------------------------------------GA---GAA---CC-UGC-A-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-CC--AUUAG---U-U-GC-U-A--CA--U--------------------------------UCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGAG-CACU-C-U-AAU-GGGAC-U-GCCG-GU-G-A-CAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUAUA--GG-U-G-GGGCUACACACGUCAUACAAUGG-CUGGUA--C-AAA-GGGU-U-GC-C-A-A-CCCG-CG-AGGG-G-----------GA-G-CUAA-UCC-CA-U-AAAGCCA-GUC-GUAGUCCGGA-UCGCAGUC-U-GCAACUC-GACUGCG-UGAAGUCGGAAU-CGCUAGUA-AUCGU-GGA-UC-AG-AAU-GUCACGGUG-AAU-ACGUU-CCCGGGUCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GCGGGUCUCGCCA-GAAG-UAGG-UAG-C-CU-AA-CC----------------------------------GUA-A--------------------------------------GGAGG-G-CGCUUA-CCACGGCGGGGUUCG-UG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAUCGGAAGGUG-CGGC-UGGAUCACCUCCUUUCU--------------------------------------------------------------------------------------
+>AciPleu4 Actinobacillus pleuropneumoniae
+----------------GAGCGAUUAAACUUUUUGAAUUGAAGAGUUU-GAU-CAUGGCUCAGAUUGAAC-GC-UGGC-GGC-A-GG--C-UUAACACAU-GCAAGU-CGA-ACG--GUAA-CGG-------------G-------------------------------AAGGGAG----------------------------------CUUG----------------------------------CUUUCUUU---------------------------------------------G-CCG--AC--GAG-UGG-C-GG--A-CGGGUGAGU---AAU-GCUUGGG-A-A--UCU-GG-CUUAUGGA-GG--GGGAU-AA-CUACG-G-GAAA-CUG-UAG-CUAAUACC-G-CGU-AA---U----------------AUC---------------------------------------------------------------------------------------------U-AUG------------------------------------------------------------------------------------GAU-----------------UAAA--GG-G-UG-G-GA-C-U---------UUCG-----------GG---CCAC-CU-G--C----------CA----------UAAG---AUG-A-GCCCAAGU-GGG--A------UU-A-G-GU-A-G---UUGGUU-AG-G-UAAA-GG-CUGACCAA-GCCG-ACG-AUCUCUAGCUGGUCU-G-AG-------------A-GGAU-GACC-AGCCACACUGGAA-CUGA-GA-CACG-GUCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCA--------------------CAAU-GGGG-GGAA-CCCUGAUGCAGCCAUGCCGCG-UGA-AU-GA-AGAA-GGCC--UU-CG-GG-UUGUAAA------------------------GUUCUUUC-GG-UAGC-GAG-G------AA-GGUA-UCAAAU-------U-----U-AA-UA----G---AU-UUGG-UAA-UU-GA-CGUU-A-A-CU--A-CAG---------AA-GAAGC-ACC-GGCUAAC-UCCGU---GCCAGCAGCCG-CGGUAAU-AC-GGAG-GGUGCG-A-GCG-UUAAU-CGGAAUAACUGGGCGUAAAGGGCACG-CAG-G-CGGUUG-AUUAAG-UGAG-AUGUG-AAA-GC-CCCGGG-CUU-AA-CCUGGG-AAU-U-------------------------------------------GC-A-U----------------------------------------------UUCA-UAC-UGGUC-AAC-U-A-G-AG-UA-----CUUUAG-GGAGG-GGU-AGAAUU-CCA--------------------CGU-GUA-GCG-GUGAAA-UG-C-GUAGAG-AUGUGGAGG-AAU-A-CCGA--A-G-GCGAAGGCAG--CCCCUUG------GGAAU--------------------------------------------------------------GUA-CU--GACG-----CUCA-UG--UGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCUGUAAACGCUG-UCGA-UUUGGGG-AUUGGGCU------UUA-----------------------------------A-GUCUGGU-GCCC-GAA-GCUAACGUGA-UAA-AUCG-ACCGCCUG-GGGAGUACGGCC-GCAA-GGUU-AAA-ACUC-AAA-UGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AUGCAACG-CGAAG-AA-CCUUA-CCUACUC-UUGACA-UC--------------CAUGG------A-AU-C-U-UAUA-GAGA-U-AC-G-AGAG--UG-----CC-----------------------------------------UUCG----------------------------------------------------------------GG----AA---CC-AUG-A-GA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUU-GUGA-AAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUA-UC--CUUUG---U-U-GC-C-AG-CG--A--U-----------------------------UAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-UCGGG-AACU-C-A-AAG-GAGAC-U-GCCG-GU-G-A-UAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCAUCAU-G-GC-CCUUACG--AG-U-A-GGGCUACACACGUGCUACAAUGG-CGUAUA--C-AGA-GGGA-A-GC-A-A-G-AUGG-CG-ACAU-G-----------GA-G-CAAA-UCU-CA-C-AAAGUAC-GUC-UAAGUCCGGA-UUGGAGUC-U-GCAACUC-GACUCCA-UGAAGUCGGAAU-CGCUAGUA-AUCGC-AAA-UC-AG-AAU-GUUGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUGGGUUGUACCA-GAAG-UAGA-UAG-C-UU-AA-CC----------------------------------GAA-A--------------------------------------GGGGG-G-CGUUUA-CCACGGUAUGAUUCA-UG-ACU-GGGGUG-AAGUCGUAGCAAGGUAACCGUAGGGGAACCUG-CGGU-UGGAUCACCUCCUUACCAGAAAUUGAGCGACAGCGA-------------------------------------------------------------------
+>CloBotu4 Clostridium botulinum
+---------------------------------NNNNNNNAGAGUUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-CUAACACAU-GCAA-U-CGA-GCG--AU---GAA----------------------------------------------GCUUCC----------------------------------UUCG----------------------------------GGAAGU-------------------------------------------------GGA--UU---AG-CGG-C-GG--A-CGGGUGAGU---AAC-ACGUGGG-UAA--CCU-GC-CUCAUAGA-GG--GGAAU-AG-CCUCC-C-GAAA-GGG-AGA-UUAAUACC-G-CAU-AA---A-G-UAU-G--A-AG--GUC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GAC--U-UCAU--UA-UAC-CAAA--GG-A---------------------GUAA-------------------U-CC-G--C----------UA----------UGAG---AUG-G-ACCCGCGG-CGC--A------UU-A-G-CU-A-G---UUGGUG-AG-G-UAAG-GG-CUCACCAA-GGCA-ACG-AUGCGUAGCCGACCU-G-AG-------------A-GGGU-GAUC-GGCCACAUUGGAA-CUGA-GA-CACG-GUCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCG--------------------CAAU-GGGG-GAAA-CCCUGACGCAGCAACGCCGCG-UGA-AU-GA-AGAA-GGCC--UU-AG-GG-UUGUAAA------------------------GUUCUGUC-AU-AUGG-GAA-G------A--------------------------U-AA------------------------U-GA-CGGU-A-C-CA--U-AUG---------AG-GAAGC-CAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GUGGCA-A-GCG-UUGUC-CGGAUUUACUGGGCGUAAAGGAUGCG-UAG-G-CGGACA-UUUAAG-UCAG-AUGUG-AAA-UA-CCCGGG-CUC-AA-CUUGGG-UGC-U-------------------------------------------GC-A-U----------------------------------------------UUGA-AAC-UGGGU-GUC-U-A-G-AG-UG-----CAGGAG-AGGAA-AGC-GGAAUU-CCU--------------------AGU-GUA-GCG-GUGAAA-UG-C-GUAGAG-AUUAGGAAG-AAC-A-CCAG--U-G-GCGAAGGCGG--CUUUCUG------GACUG--------------------------------------------------------------UAA-CU--GACG-----CUGA-GG--CAUGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AAUA-CUAGGUG-UAGGAGG-----UAUCGA-CC---------------------------------CCUUCUG-UGCC-GCA-GUUAACACAA-UAA-GUAU-UCCGCCUG-GGGAGUACGAUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCA-GCGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCUAGAC-UUGACA-UC--------------CCCUG------A-AU-U-A-CCUG-UAAU-G-AG-G-GAAG--C------CC-----------------------------------------UUCG----------------------------------------------------------------GG-----G---CA-GGG-A-GA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUA-UC--AUUAG---U-U-GC-U-AC-CA--U--------------------------------UAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGAG-CACU-C-U-AGU-GAGAC-U-GCCC-GG-G-U-UAA-CCG-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--UC-U-A-GGGCUACACACGUGCUACAAUGG-UUGGUA--C-AAC-AAGA-U-GC-A-A-G-ACCG-CG-AGGU-G-----------GA-G-CUAA-ACU-UA---AAAAACC-AAC-CCAGUUCGGA-UUGUAGGC-U-GAAACUC-GCCUACA-UGAAGCCGGAGU-UGCUAGUA-AUCGC-GAA-UC-AG-CAU-GUCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGAGA-GCUGGUAACACCC-GAAG-UCCG-UGA-G-GU-AA-CC----------------------------------GUA-A--------------------------------------GGAGC-C-AGCGGC-CGAAGGUGGGAUUAG-UG-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGAGAACCUG-CGGU-UGGAUCACCUCCUU-----------------------------------------------------------------------------------------
+>DihNodos Dichelobacter nodosus
+----------------------------------AACUGAAGAGUUU-GAU-UCUGGCUCAGAUUGAAC-GC-UGGC-GGC-A-UG--C-UUAACACAU-GCAAGU-CGA-ACG--GGGU-UAU------------------------------------------------GUAG----------------------------------CUUG----------------------------------CUAU-------------------------------------------------G-UAA--CC--UAG-UGG-C-GG--A-CGGGUGAGU---AAU-AUAUAGG-A-A--UCU-GC-CUUAUGGU-GG--GGGAC-AA-CGUAU-G-GAAA-CGU-ACG-CUAAUACC-G-CAU-AA---G----------------AUU---------------------------------------------------------------------------------------------G-AAG------------------------------------------------------------------------------------AAU-----------------GAAA--GC-G-GG-G-GC-U-C---------GAAA-----------GA---CCUC-GC-G--C----------CG----------UAAG---AUG-A-GCCUAUAU-CGG--A------UU-A-G-CU-A-G---UUGGUG-GG-G-UAAG-AG-CCUACCAA-GGCG-ACG-AUCCGUAGCUGGUUU-G-AG-------------A-GAAU-GAUC-AGCCACAUCGGGA-CUGA-GA-CACG-GCCCNAA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CNAU-GGGG-GGAA-CCCUGAUCCAGCAAUGCCGCG-UGU-GU-GA-AGAA-GGCC--UU-CG-GG-UUGUAAA------------------------GCACUUUU-AU-UAGU-GAA-G------AA-CGGU-GCAUGG-------U-----U-AA-UA----C---CC-AUGC-AA--UU-GA-CAUU-A-G-CU--A-AGG---------AA-AAAGC-ACC-GGCUNAC-UCCGU---GCCAGCAGCCG-CGGUAAU-AC-GGAG-GGUGCA-A-GCG-UUAUU-CGGAAUGACUGGGCGUAAAGCGCACG-CAG-G-UGGUUU-UAUAAG-UCAG-GUGUG-AAA-UC-CCUGGG-CUC-AA-CCUAGG-AAU-U-------------------------------------------GC-A-U----------------------------------------------UUGA-AAC-CGUAA-GAC-U-A-G-AG-UA-----UGUCAG-AGGAA-GGC-GGAAUU-UCC--------------------AGU-GUA-GCA-GUGAAA-UG-C-GUAGAU-AUUGGAAGG-AAC-A-CCGA--U-G-GCGAAGGCAG--CCUUCUG------GGGCA--------------------------------------------------------------AUA-CU--GACA-----CUCA-UG--UGCGAAA-G-C-GUGGG-UAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCCUAAACGAUG-UCAA-CUAGGUG-UUGGGUA-------GAAA------------------------------------UACUCGG-UACC-GAA-GCUAACGCAA-UAA-GUUG-ACCGCCUG-GGGAGUACGGCC-GCAA-GGUU-GAA-ACUC-AAA-GAAAUUG-ACGGGGA-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AUGCAACG-CGAAG-AA-CCUUA-CCAGGCU-UUGACA-UC--------------CAGAG------A-AU-U-C-UACA-GAGA-U-GU-G-GGAG--UG-----CC-----------------------------------------UUCG----------------------------------------------------------------GG----AA---CU-CUG-A-GA--------------------------------------------------CAGGU-GUUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUA-UC--CUUAC---U-U-GC-C-AG-CA--C-------------------------------GUAAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUGGG-AACU-A-U-AAG-GAGAC-U-GCCG-GU-G-A-CAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCAUCAU-G-GC-CCUUACA--GC-C-U-GGGCUACACACGUGCUACAAUGG-GCGGUA--C-AGA-CGGU-A-GC-C-A-A-CCCG-CG-AGGG-G-----------GA-G-CCAA-UCU-GA-G-AAAACCG-UUC-GUAGUCCGGA-UUGCAGUC-U-GCAACUC-GACUGCA-UGAAGUCGGAAU-CGCUAGUA-AUCGC-GAA-UC-AG-CAC-GUCGCGGUG-AAU-ACGUU-CCCGGGUCUUGUA----CACACUGCCCGUC-ACA--CCAUGGGA-GUUUGUUGCACCA-GAAG-UAGG-UAG-C-UU-AA-CC----------------------------------GUA-A--------------------------------------GGAGG-G-CGCUUA-CCACGGUGUGGCCGA-UG-ACU-GGGGUG-AAGUCGUAACAAGGUAACCGUAGGGGAACCUG-CGGU-UGGAUCACCUCCUUU----------------------------------------------------------------------------------------
+>ThnCellu "Thermoanaerobacter cellulolyticus"
+--------------------------------------------UUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-CUAACGCAU-GCAAGU-CGA-GCGG-GG---AUG--------GUGGUU-------------------------------GAAGGUG----------------------------------AUG-----------------------------------AGCUGGAGGCUGC------------------------------------------UAC--CU--UAG-CGG-C-GG--A-CGGGUGAGU---AAC-ACGUGAG-UAA--CCU-AC-CCCCAGCA-CG--GGGAU-AA-CAGCU-C-GAAA-GGG-CUG-CUAAUACC-C-GAU-GG---G-A-CCA-C--G-GC--AUC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GAU--G-C--U--GU-GGU-GAAA--GG-G-UA-G----C-CG--------GUG---------A--GG---CUAUUCC-G--G----------CU----------GGGG---AUG-G-GCUCGCGG-CCC--A------UC-A-G-CU-A-G---UUGGUG-GG-G-UAAU-GG-CCCACCAA-GGCU-ACG-ACGGGUAGCCGGCCU-G-AG-------------A-GGGU-GGUC-GGCCACAGUGGGA-CUGA-GA-CACG-GCCCACA-CUC-C-UACG--GGAG-GC-A-GC-A-G-CGGGG-AAUCUUGCG--------------------CAAU-GGGC-GAAA-GCCUGACGCAGCGACGCCGCG-UGA-GG-GA-UGGA-AGCC--UU-CG-GG-GUGUAAA------------------------CCUCUUUG-GA-CGGG-GA--G--A---A--------------------------G-UA-GG---------------------A-GA-UAGU-A-C-CC--G-UUU---------AA-AAAGC-CAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GUGGCG-A-GCG-UUGUC-CGGAAUUACUGGGCGUAAAGGGUGCG-UAG-G-CGGCUG-GGUAAG-UUAA-GCGUG-AAA-UC-UUGGGG-CUC-AA-CCCCAA-GGC-U-------------------------------------------GC-G-C----------------------------------------------UUAA-UAC-UGCUC-GGC-U-A-G-AG-UA-----CGGGAG-AGGAC-GGC-GGAAUU-CCC--------------------GGU-GUA-GCG-GUGAAA-UG-C-GUAGAU-AUCGGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGG--CCGUCUG------GACCG--------------------------------------------------------------UUA-CU--GACG-----CUGA-GG--CACGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCUGUAAACGAUG-GAUG-CUAGGUG-UGGGGGAG-----AAGGA----------------------------------C-UCCUCCG-UGCC-GUA-GUUAACACAU-UAA-GCAU-CCCGCCUG-GGGAGUACGGCC-GCAA-GGUU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCAGGGC-UUGACA-UG--------------CCGGG------A-AC-C-C-UGCC-GAAA-G-GU-G-GGGG--UGCCU-GCGCG---------------------------------------AUG---------------------------------------------------------------AGUGCAGGAG---CC-CGG-A-CA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CCUG-CC--CUUAG---U-U-GC-C-AG-CG--G-------------------------------GUAAUG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGGG-CACU-C-U-AAG-GGGAC-U-GCCG-UC-G-A-UGA-GGC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--CC-C-U-GGGCUACACACGUGCUACAAUGG-GUGCUA--C-AGA-GGGU-U-GC-G-A-A-GGCG-CG-AGCC-G-----------GA-G-CUAA-UCC-CA-A-AAAAGCA-CCC-CCAGUUCGGA-UUGCAGGC-U-GCAACUC-GCCUGCA-UGAAGCCGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGAGA-GUCAGCAACACCU-GAAG-ACAC-GCU---------------------------------------------GUG-A----------------------------------------------GCGUGU-UGAAGGUGGGGCUGA-UG-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUACGGGAACGUG-CGGC-UGGAUCACCUCCU------------------------------------------------------------------------------------------
+>LatSanf2 Lactobacillus sanfrancisco
+----------------------------------------AGAGUUU-GAU-NNUGGCUCAGGACGAAC-GU-UGGC-GGC-G-UG--C-CUAAUACAU-GCAAGU-CGA-ACGA-AG---UCG---CCCAAUUGAUU-------------------------------CUUAGUG----------------------------------CUUG----------------------------------CACUAAGAUGAUUUUGGA-----------------------------------UCCGA--CU--GAG-UGG-C-GA--A-CUGGUGAGU---AAC-ACGUGGG-UAA--CCU-GC-CCAGAAGA-AG--GGGAU-AA-CACCU-G-GAAA-CAG-AUG-CUAAUACC-G-UAU-AA-----C-AAC-A--A-GA--ACC---------------------------------------------------------------------------------------------A-CAU------------------------------------------------------------------------------------GGU--U-C--U--UG-UUU-GAAA--GC-U-GG-C---------------CUUUGU---------------GCUA-GU-G--C----------UU----------CUGG---AUG-G-ACCCGCGG-CGU--A------UU-A-G-CU-A-G---UUGGUG-AG-A-UAAU-AG-CUCACCAA-GGCA-AUG-AUACGUAGCAGACCU-G-AG-------------A-GGGU-AAUC-UGCCACAAUGGGA-CUGA-GA-CACG-GCCCAUA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UAGGG-AAUCUUCCA--------------------CAAU-GGAC-GAAA-GUCUGAUGGAGCAACGCCGCG-UGA-GU-GA-AGAA-GGGU--UU-CG-GC-UCGUAAA------------------------ACUCUGUU-GU-UAGA-GAA-G--A---AC-AGCC-GUGAGA-------G-----C-AA-C-----U---GC-UCAC-GGU-AU-GA-CGGU-A-U-CU--A-ACC---------AG-AAAGU-CAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GUGGCA-A-ACG-UUGUC-CGGAUUUAUUGGGCGUAAAGGGAGCG-CAG-G-CGGUUU-AUUAAG-GCUG-AUGUG-AAA-CG-CUUCGG-CUU-AA-CCGGAG-AAG-U-------------------------------------------GC-A-U----------------------------------------------CGGA-AAC-UGAUA-AAC-U-U-G-AG-UG-----CAGAAA-AGGAU-AGU-GGAACU-UCA--------------------UGU-GUA-GCG-GUGAAA-UG-C-GUAGAU-AUAUGAAGG-AAC-A-CCAG--U-G-GCGAAGGCGG--CUAUCUG------GUCUG--------------------------------------------------------------UAA-CU--GACG-----CUGA-GG--CUCGAAA-G-C-AUGGG-UAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAU-GCCGUAAACGAUG-AAUG-CUAGGUG-UUGGAAGG--U---UUCC---------------------------------GC-CUUUCAG-UGCC-GCA-GCUAACGCAU-UAA-GCAU-UCCGCCUG-GGGAGUACGACC-GCAA-GGUU-GAA-ACUC-AAA-GGAAUUG-ACGGGGA-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AUGCUACG-CGAAG-AA-CCUUA-CCAGGAC-UUGACA-UC--------------UUCUG------C-CA-A-U-CUAA-GAGA-U-UA-G-ACGU--U------CC-----------------------------------------UUCG----------------------------------------------------------------GG----GA---CA-GAA-U-GA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-UC--UUUAG---U-U-GC-C-AG-CA--U--------------------------------UAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AGA-GAGAC-U-GCCG-GU-G-A-UAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--UC-C-U-GGGCUACACACGUGCUACAAUGG-GCGAUA--C-AAC-GAGU-U-GC-G-A-A-ACCG-CG-AGGU-C-----------AA-G-CUAA-UCU-CU-U-AAAGUCG-UUC-UCAGUUCGGA-UUGCAGUC-U-GCAACUC-GACUGCA-UGAAGUUGGAAU-CGCUAGUA-AUCGU-GGA-UC-AG-CAU-GCCACGGUG-AAU-ACGUU-CCCGGGUCUUGUA----CACACCGCCCGUC-ACA--CCAUGAGA-GUUUGUAACACCC-AAAG-UCGG-UUG-G-AU-AA-CCU---------------------------------UUU-U-------------------------------------AGGAGU-C-CGCCGC-CUAAGGUGGGACAGA-UG-AUU-AGGGUG-AAGUCGUAACAAGGUAGCCGUAGGAGAACCUG-CGGC-UGGAUCACCUCCUUUNU--------------------------------------------------------------------------------------
+>HafDenit Haloferax denitrificans
+--------------------------------------AUUCCGGUU-GAU-CCUGCCGGAGGUC-AUU-GC-UAUU-GGG-GUCC--GAUUUAGCCAU-GCUAGU-UGC-ACGA-GU--------------------------------------------------------------------------------------------UCAU----------------------------------------------------------------------------------------------GU--UCG-UGG-C-GA--A-AAGCUCAGU---AAC-ACGUGGC-CAA--ACU-AC-CCUACAGA-GA--ACGAU-AA-CCUCG-G-GAAA-CUG-AGG-CUAAUAGU-U-CAU-A------C-GGG-A--G-UC-AUGC--------------------------------------------------------------------------------------------UG-GAAU-----------------------------------------------------------------------------------GCC--G-A--C--UC-CCC-GAAA-CGC-----------------------UCAG---------------------GC-G--C----------UG----------UAGG---AUG-U-GGCUGCGG-CCG--A------UU-A-G-GU-A-G---ACGGUG-GG-G-UAAC-GG-CCCACCGU-GCCG-AUA-AUCGGUACGGGUUGU-G-AG-------------A-GCAA-GAGC-CCGGAGACGGAAU-CUGA-GA-CAAG-AUUCCGG-GCC-C-UACG--GGGC-GC-A-GC-A-G-GCGCG-AAACCUUUA--------------------CACU-GCAC-GAAA-GUCGAUUAAGGGGACCCCAAG-UGC-GA-G-----G-GC----AUAUA----GUC--C-------------------------UCGCUUUU-CU-CGAC-U-------------------------------G-----U-AA-GG----C--------------------------G-G-UC--G-AGG---------AA-UAAGA-GCUGGGCAAGA-CCGGU---GCCAGCCGCCG-CGGUAAU-AC-CGG-CAGCUCA-A-GUG-AUGAC-CGAUAUUAUUGGGCCUAAAGCGUCCG-UAG-C-CGGCCA-CGAAGG-UUCA-UCGGG-AAA-UC-CGCCAG-CUC-AA-CUGGCG-GGCGU-------------------------------------------CC-G-G----------------------------------------------UGAA-AAC-CACGU-GGC-U-U-G-GG-AC-----CGGAAG-GCUCG-AGG-GGUACG-UCC--------------------GGG-GUA-GGA-GUGAAA-UC-C-UGUAAU-CCUGGACGG-ACC-A-CCGA--U-G-GCGAAAGCAC--CUCGAGA------AGACG--------------------------------------------------------------GAU-CC--GACGG-----UGA-GG--GACGAAA-G-C-UAGGG-UCUC-GAACCGG-AUUAGAUAC-----CCGGGUAG-UCCUA-GCUGUAAACGAUG-CUCG-CUAGGUG-UGGCACAG--GC-UACGA--------------------------------GCC-UGUGU-G-UGCC-GUA-GG-AAGCCGA-GAA-GCGA-GCCGCCUG-GGAAGUACGUCC-GCAA-GGAU-GAA-ACUU-AAN-GGGNUUG-GCGGGGG-AGC--ACUA--CA-A-CCG-GAGGAG-CC-UGCGGU-UUAAUUG-G-ACUCAACG-CCGGA-CA-UCUCA-CCAGCUC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACUACAGUGAUGACGAUCAGGUUGAUGACCUUAUCACGACGCUGUAGAGAGGA-GGUGCAUGGCCGCCGUCA-GCUCGUACC-GUGA-GGCGU-CCUG-UUAA-GU-CAGGCAAC-GAGCGAGACC-CGCA-CU--UCUAA---U-U-GC-C-AG-CA--G--CAGU--------------------------UUCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACU---GGCUGGG-UACA-U-U-AGA-AGGAC-U-GCCG-CU-G-C-UAA-AGC-G--GAGG-A-AGG-A-ACGG-GCAACGGU--AGGUCAGUAU-G-CC-CCGAAUG--AG-C-U-GGGCUACACGCGGGCUACAAUGG-UCGAGA--C-AAU-GGGU-U-GC-U-A-U-CUCG-AA-AGAG-A-----------AC-G-CUAA-UCU-CC-U-AAACUCG-AUC-GUAGUUCGGA-UUGAGGGC-U-GAAACUC-GCCCUCA-UGAAGCUGGAUU-CGGUAGUA-AUCGC-AUU-UC-AA-UAG-AGUGCGGUG-AAU-ACGUC-CCUGCUCCUUGCA----CACACCGCCCGUC-AAA--GCACCCGA-GUGAGGUCCGGAU-GA-G-GCCA-C-A----------------------------------------------CA-C----------------------------------------------GGUGGU-CGAAUCUGG-CUUCG-CA-AGG-GGGCUU-AAGUCGUAACAAGGUAGCCGUAGGGGAAUCUG-CGGC-UGGAUCACCUCCU------------------------------------------------------------------------------------------
+>PrtVulg2 Proteus vulgaris 2
+-------------CUUUGAGCAUCAAACACUUUUAAUUGAAGAGUUU-GAU-CAUGGCUCAGAUUGAAC-GC-UGGC-GGC-A-GG--C-CUAACACAU-GCAAGU-CGA-GCG--GUAA-CAG---------------------------------------------GAGAAAG----------------------------------CUUG----------------------------------CUUUCUU----------------------------------------------G-CUG--AC--GAG-CGG-C-GG--A-CGGGUGAGU---AAU-GUAUGGG-G-A--UCU-GC-CCGAUAGA-GG--GGGAU-AA-CUACU-G-GAAA-CGG-UGG-CUAAUACC-G-CAU-GA---C----------------GUC---------------------------------------------------------------------------------------------U-ACG------------------------------------------------------------------------------------GAC-----------------CAAA--GC-A-GG-G-GC-U-C---------UUCG-----------GA---CCUU-GC-G--C----------UA----------UCGG---AUG-A-ACCCAUAU-GGG--A------UU-A-G-CU-A-G---UAGGUG-AG-G-UAAU-GG-CUCACCUA-GGCA-ACG-AUCUCUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCA--------------------CAAU-GGGC-GCAA-GCCUGAUGCAGCCAUGCCGCG-UGU-AU-GA-AGAA-GGCC--UU-AG-GG-UUGUAAA------------------------GUACUUUC-AG-CGGG-GAG-G------AA-GGUG-AUAAAG-------U-----U-AA-UA----C---CU-UUAU-CAA-UU-GA-CGUU-A-C-CC--G-CAG---------AA-GAAGC-ACC-GGCUAAC-UCCGU---GCCAGCAGCCG-CGGUAAU-AC-GGAG-GGUGCA-A-GCG-UUAAU-CGGAAUUACUGGGCGUAAAGCGCACG-CAG-G-CGGUCA-AUUAAG-UCAG-AUGUG-AAA-GC-CCCGAG-CUU-AA-CUUGGG-AAU-U-------------------------------------------GC-A-U----------------------------------------------CUGA-AAC-UGGUU-GGC-U-A-G-AG-UC-----UUGUAG-AGGGG-GGU-AGAAUU-CCA--------------------CGU-GUA-GCG-GUGAAA-UG-C-GUAGAG-AUGUGGAGG-AAU-A-CCGG--U-G-GCGAAGGCGG--CCCCCUG------GACAA--------------------------------------------------------------AGA-CU--GACG-----CUCA-GG--UGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCUGUAAACGAUG-UCGA-UUUAGAG-GUUGUGGU-----CUUGA----------------------------------A-CUGUGGC-UUCU-GGA-GCUAACGCGU-UAA-AUCG-ACCGCCUG-GGGAGUACGGCC-GCAA-GGUU-AAA-ACUC-AAA-UGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AUGCAACG-CGAAG-AA-CCUUA-CCUACUC-UUGACA-UC--------------CAGCG------A-AU-C-C-UUUA-GAGA-U-AG-A-GGAG--UG-----CC-----------------------------------------UUCG----------------------------------------------------------------GG----AA---CG-CUG-A-GA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUU-GUGA-AAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUA-UC--CUUUG---U-U-GC-C-AG-CG--C--G-----------------------------UAAU--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-GCGGG-AACU-C-A-AAG-GAGAC-U-GCCG-GU-G-A-UAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCAUCAU-G-GC-CCUUACG--AG-U-A-GGGCUACACACGUGCUACAAUGG-CAGAUA--C-AAA-GAGA-A-GC-G-A-C-CUCG-CG-AGAG-C-----------AA-G-CGGA-ACU-CA-U-AAAGUCU-GUC-GUAGUCCGGA-UUGGAGUC-U-GCAACUC-GACUCCA-UGAAGUCGGAAU-CGCUAGUA-AUCGU-AGA-UC-AG-AAU-GCUACGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUGGGUUGCAAAA-GAAG-UAGG-UAG-C-UU-AA-CC----------------------------------UUC-G--------------------------------------GGAGG-G-CGCUUA-CCACUUUGUGAUUCA-UG-ACU-GGGGUG-AAGUCGUAACAAGGUAACCGUAGGGGAACCUG-CGGU-UGGAUCACCUCCUUACCUAAGAGAUACGUGUU-----------------------------------------------------------------------
+>LatFruct Lactobacillus fructivorans
+----------------------------------------AGAGUUU-GAU-NNUGGCUCAGGACGAAC-GC-UGGC-GGC-A-UG--C-CUAAUACAU-GCAAGU-CGA-ACGA-GC---UGC---GCCUAAUGAUA-------------------------------GUUGAUG----------------------------------CUUG----------------------------------CAUUAGCUUGACUUAAGU-----------------------------------UAGCA--GC--GAG-UGG-C-GA--A-CUGGUGAGU---AAC-ACGUGGA-UAA--CCU-GC-CCAGAAGA-AG--GGGAU-AA-CACCU-G-GAAA-CAG-AUG-CUAAUACC-G-UAU-AA-----C-AAC-G--A-AA--ACC---------------------------------------------------------------------------------------------A-CAU------------------------------------------------------------------------------------GGU--U-U--U--CG-UUU-GAAA--GA-U-GG-C---------------CUUUGU---------------GCUA-UC-G--C----------UU----------UUGG---AUG-G-AUCCGCGG-CGC--A------UU-A-G-CU-A-G---UUGGUG-AG-A-UAAA-GG-CUCACCAA-GGCA-AUG-AUGCGUAGCCGACCU-G-AG-------------A-GGGU-AAUC-GGCCACAUUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UAGGG-AAUCUUCCA--------------------CAAU-GGAC-GAAA-GUCUGAUGGAGCAAUGCCGCG-UGA-GU-GA-AGAA-GGGU--UU-CG-GC-UCGUAAA------------------------ACUCUGUU-GU-UAGA-GAA-G--A---AC-GGGC-GUGAGA-------G-----U-AA-C-----U---GC-UCAC-GUC-GC-GA-CGGU-A-U-CU--A-ACC---------AG-AAAGU-CAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GUGGCA-A-GCG-UUGUC-CGGAUUUAUUGGGCGUAAAGCGAGCG-CAG-G-CGGUCU-UCUAAG-UCUG-AUGUG-AAA-CG-CUUCGG-CUU-AA-CCGGAG-AAG-U-------------------------------------------GC-A-U----------------------------------------------CGGA-AAC-UGGGA-AAC-U-U-G-AG-UG-----CAGAAG-AGGAC-AGU-GGAACU-CCA--------------------UGU-GUA-GCG-GUGAAA-UG-C-GUAGAU-AUAUGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGG--CUGUCUA------GUCUG--------------------------------------------------------------UAA-CU--GACG-----CUGA-GG--CUCGAAA-G-C-AUGGG-UAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAU-GCCGUAAACGAUG-AGUG-CUAGGUG-UUGGAGGG--U---UUCC---------------------------------GC-CCUUCAG-UGCC-GCA-GCUAACGCAU-UAA-GCAC-UCCGCCUG-GGGAGUACGACC-GCAA-GGUU-GAA-ACUC-AAA-GGAAUUG-ACGGGGA-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AUGCUACG-CGAAG-AA-CCUUA-CCAGGAC-UUGACA-UC--------------UUCUG------C-CA-A-U-CUAA-GAGA-U-UA-G-ACGU--U------CC-----------------------------------------UUCG----------------------------------------------------------------GG----GA---CA-GAA-U-GA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-UC--AUUAG---U-U-GC-C-AG-CA--U--------------------------------UAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AAU-GAGAC-U-GCCG-GU-G-A-CAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--AC-C-U-GGGCUACACACGUGCUACAAUGG-ACGGUA--C-AAC-GAGU-U-GC-G-A-A-ACCG-CG-AGGU-C-----------AA-G-CUAA-UCU-CU-U-AAAGCCG-UUC-UCAGUUCGGA-UUGCAGGC-U-GCAACUC-GCCUGCA-UGAAGUUGGAAU-CGCUAGUA-AUCGU-GGA-UC-AG-CAU-GCCACGGUG-AAU-ACGUU-CCCGGGUCUUGUA----CACACCGCCCGUC-ACA--CCAUGAGA-GUUUGUAACACCC-AAAG-UCGG-UUA-G-GU-AA-CC----------------------------------UUU-U--------------------------------------GGAGC-C-UGCCGC-CUAAGGUGGGACAGA-UG-AUU-AGGGUG-AAGUCGUAACAAGGUAGCCGUAGGAGAACCUG-CGGC-UGGAUCACCUCCUUUNU--------------------------------------------------------------------------------------
+>RhiFred2 Rhizobium fredii 4
+----------------------------------AACUUGAGAGUUU-GAU-CCUGGCUCAGAACGAAC-GC-UGGC-GGC-A-GG--C-UUAACACAU-GCAAGU-CGA-GCGC-CC---------------------------------------------------------C----------------------------------GCAA----------------------------------G-----------------------------------------------------------NN--NAG-CGG-C-AG--A-CGGGUGAGU---AAC-GCGUGGG-A-A--UCU-AC-CCUUUUCU-AC--GGAAU-AA-CGCAG-G-GAAA-CUU-GUG-CUAAUACC-G-UAU-GA---G----------------CCC---------------------------------------------------------------------------------------------U-UCG------------------------------------------------------------------------------------GGG-----------------GAAA--GA-----------------------UUUA---------------------UC-G--G----------GA----------AAGG---AUG-A-GCCCGCGU-UGG--A------UU-A-G-CU-A-G---UUGGUG-GG-G-UAAA-GG-CCUACCAA-GGCG-ACG-AUCCAUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACAUUGGGA-CUGA-GA-CACG-GCCCAAA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGGC-GCAA-GCCUGAUCCAGCCAUGCCGCG-UGA-GU-GA-UGAA-GGCC--CU-AG-GG-UUGUAAA------------------------GCUCUUUC-AC-CGGU-GAA-G------A--------------------------U-AA------------------------U-GA-CGGU-A-A-CC--G-GAG---------AA-GAAGC-CCC-GGCUAAC-UUCGU---GCCAGCAGCCG-CGGUAAU-AC-GAAG-GGGGCU-A-GCG-UUGUU-CGGAAUUACUGGGCGUAAAGCGCACG-UAG-G-CGGACA-UUUAAG-UCAG-GGGUG-AAA-UC-CCGGGG-CUC-AA-CCCCGG-AAC-U-------------------------------------------GC-C-U----------------------------------------------UUGA-UAC-UGGGU-GUC-U-A-G-AG-UC-----CGGAAG-AGGUG-AGU-GGAAUU-CCG--------------------AGU-GUA-GAG-GUGAAA-UU-C-GUAGAU-AUUCGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGG--CUCACUG------GUCCG--------------------------------------------------------------GUA-CU--GACG-----CUGA-GG--UGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AAUG-UUAGCCG-UCGGGCAG------UUUA----------------------------------C-UGUUCGG-UGGC-GCA-CGUAACGCAU-UAA-ACAU-UCCGCCUG-GGGAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGCAG-AA-CCUUA-CCAGCCC-UUGACA-UC-------------CCGAUC------G-CG-G-AUACGA-GAGA-U-CG-UAUCCU--UC-----AG-----------------------------------------UUCGG---------------------------------------------------------------CU----G----GA-UCGGA-GA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUCG-CC--CUUAG---U-U-GC-C-AG-CA--U--------------------------------UUAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AAG-GGGAC-U-GCCG-GU-G-A-UAA-GCC-GA-GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUACG--GG-C-U-GGGCUACACACGUGCUACAAUGG-UGGUGA--C-AGU-GGGC-A-GC-G-A-G-ACCG-CG-AGGU-C-----------GA-G-CUAA-UCU-CC---AAAAGCC-AUC-UCAGUUCGGA-UUGCACUC-U-GCAACUC-GAGUGCA-UGAAGUUGGAAU-CGCUAGUA-AUCGC-AGA-UC-AG-CAU-GCUGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUUGGUUCUACCC-GAAG-GUAG-UGC-G-CU-AA-CC----------------------------------GCA-A--------------------------------------GGAGG-C-AGCUAA-CCACGGUAGGGUCAG-CG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCC-------------------------------------------------------------------------------------------
+>LatAcid3 Lactobacillus acidophilus subsp johnsonii
+----------------------------------------AGAGUUU-GAU-NNUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-CUAAUACAU-GCAAGU-CGA-GCGA-GC---UUG----CCUAGAUGAU-------------------------------UUUAGUG----------------------------------CUUG----------------------------------CACUAAAUGAAACUAGAU-----------------------------------A-CAA--GC--GAG-CGG-C-GG--A-CGGGUGAGU---AAC-ACGUGGG-UAA--CCU-GC-CCAAGAGA-CU--GGGAU-AA-CACCU-G-GAAA-CAG-AUG-CUAAUACC-G-GAU-AA-----C-AAC-A--C-UA--GAC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GUC--U-A--G--AG-UUU-GAAA--GA-U-GG-U----------------UCU-----------------GCUA-UC-A--C----------UC----------UUGG---AUG-G-ACCUGCGG-UGC--A------UU-A-G-CU-A-G---UUGGUA-AG-G-UAAC-GG-CUUACCAA-GGCA-AUG-AUGCAUAGCCGAGUU-G-AG-------------A-GACU-GAUC-GGCCACAUUGGGA-CUGA-GA-CACG-GCCCAAA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UAGGG-AAUCUUCCA--------------------CAAU-GGAC-GAAA-GUCUGAUGGAGCAACGCCGCG-UGA-GU-GA-AGAA-GGGU--UU-CG-GC-UCGUAAA------------------------GCUCUGUU-GG-UAGU-GAA-G--A---AA-GAUA-GAGGUA-------G-----U-AA-C-----U---GG-CCUU-UAU-UU-GA-CGGU-A-A-UU--A-CUU---------AG-AAAGU-CAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GUGGCA-A-GCG-UUGUC-CGGAUUUAUUGGGCGUAAAGCGAGUG-CAG-G-CGGUUC-AAUAAG-UCUG-AUGUG-AAA-CG-CUUCGG-CUC-AA-CCGGAG-AAU-U-------------------------------------------GC-A-U----------------------------------------------CAGA-AAC-UGUUG-AAC-U-U-G-AG-UG-----CAGAAG-AGGAG-AGU-GGAACU-CCA--------------------UGU-GUA-GCG-GUGGAA-UG-C-GUAGAU-AUAUGGAAG-AAC-A-CCAG--U-G-GCGAAGGCGG--CUCUCUG------GUCUG--------------------------------------------------------------CAA-CU--GACG-----CUGA-GG--CUCGAAA-G-C-AUGGG-UAGC-GAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAU-GCCGUAAACGAUG-AGUG-CUAAGUG-UUGGGAGG--U---UUCC---------------------------------GC-CUCUCAG-UGCU-GCA-GCUAACGCAU-UAA-GCAC-UCCGCCUG-GGGAGUACGACC-GCAA-GGUU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCAGGUC-UUGACA-UC--------------CAGUG------C-AA-A-C-CUAA-GAGA-U-UA-G-GUGU--UC-----CC-----------------------------------------UUCG----------------------------------------------------------------GG----GA---CG-CUG-A-GA--------------------------------------------------CAGGU-GGUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-UC--AUUAG---U-U-GC-C-AU-CA--U--------------------------------UAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AAU-GAGAC-U-GCCG-GU-G-A-CAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCAUCAU-G-CC-CCUUAUG--AC-C-U-GGGCUACACACGUGCUACAAUGG-ACGGUA--C-AAC-GAGA-A-GC-G-A-A-CCUG-CG-AAGG-C-----------AA-G-CGGA-UCU-CU-U-AAAGCCG-UUC-UCAGUUCGGA-CUGUAGGC-U-GCAACUC-GCCUACA-CGAAGCUGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAC-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGAGA-GUCUGUAACACCC-AAAG-CCGG-UGG-G-AU-AA-CCU---------------------------------UUA-U-------------------------------------AGGAGU-C-AGCCGU-CUAAGGUAGGACAGA-UG-AUU-AGGGUG-AAGUCGUAACAAGGUAGCCGUAGGAGAACCUG-CGGC-UGGAUCACCUCCUUUAU--------------------------------------------------------------------------------------
+>LacLact4 Lactococcus lactis
+--------------------------------UUUAUUUGAGAGUUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-CUAAUACAU-GCAAGU-UGA-GCGC-UG---AAG---------------------------------------------GUUGGUA----------------------------------CUUG----------------------------------UACCGAC------------------------------------------------UGG--AU--GAG-CAG-C-GA--A-CGGGUGAGU---AAC-GCGUGGG-GAA--UCU-GC-CUUUGAGC-GG--GGGAC-AA-CAUUU-G-GAAA-CGA-AUG-CUAAUACC-G-CAU-AA-----A-AAC-U--U-UA--AAC---------------------------------------------------------------------------------------------A-CAA------------------------------------------------------------------------------------GUU--U-U--A--AG-UUU-GAAA--GA-U-GC------------------AAUU-----------------GCA-UC-A--C----------UC----------AAAG---AUG-A-UCCCGCGU-UGU--A------UU-A-G-CU-A-G---UUGGUG-AG-G-UAAA-GG-CUCACCAA-GGCG-AUG-AUACAUAGCCGACCU-G-AG-------------A-GGGU-GAUC-GGCCACAUUGGGA-CUGA-GA-CACG-GCCCAAA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UAGGG-AAUCUUCGG--------------------CAAU-GGAC-GAAA-GUCUGACCGAGCAACGCCGCG-UGA-GU-GA-AGAA-GGUU--UU-CG-GA-UCGUAAA------------------------ACUCUGUU-GG-UAGA-GAA-G--A---AC-GUUG-GUGAGA-------G-----U-GG-AA----A---GC-UCAU-CAA-GU-GA-CGGU-A-A-CU--A-CCC---------AG-AAAGG-GAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GUCCCG-A-GCG-UUGUC-CGGAUUUAUUGGGCGUAAAGCGAGCG-CAG-G-UGGUUU-AUUAAG-UCUG-GUGUA-AAA-GG-CAGUGG-CUC-AA-CCAUUG-UAU---------------------------------------------GC-A-U----------------------------------------------UGGA-AAC-UGGUA-GAC-U-U-G-AG-UG-----CAGGAG-AGGAG-AGU-GGAAUU-CCA--------------------UGU-GUA-GCG-GUGAAA-UG-C-GUAGAU-AUAUGGAGG-AAC-A-CCGG--U-G-GCGAAAGCGG--CUCUCUG------GCCUG--------------------------------------------------------------UAA-CU--GACA-----CUGA-GG--CUCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AGUG-CUAGAUG-UAGGGAGC--U---AUA----------------------------------AG-UUCUCUG-UAUC-GCA-GCUAACGCAA-UAA-GCAC-UCCGCCUG-GGGAGUACGACC-GCAA-GGUU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCAGGUC-UUGACA-UA-------------CUCGUG------C-UA-U-U-CCUA-GAGA-U-AG-G-AAGU--U------CC-----------------------------------------UUCG----------------------------------------------------------------GG-----A---CA-CGGGA-UA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CCUA-UU--GUUAG---U-U-GC-C-AU-CA--U--------------------------------UAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AAC-GAGAC-U-GCCG-GU-G-A-UAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--AC-C-U-GGGCUACACACGUGCUACAAUGG-AUGGUA--C-AAC-GAGU-C-GC-G-A-G-ACAG-UG-AUGU-U-----------UA-G-CUAA-UCU-CU-U-AAAACCA-UUC-UCAGUUCGGA-UUGUAGGC-U-GCAACUC-GCCUACA-UGAAGUCGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAC-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCACGGGA-GUUGGGAGUACCC-GAAG-UAGG-UUG-C-CU-AA-CC----------------------------------GCA-A--------------------------------------GGAGG-G-CGCUUC-CUAAGGUAAGACCGA-UG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAUCGGAAGGUG-CGGC-UGGAUCACCUCCUUU----------------------------------------------------------------------------------------
+>CabAlter Carnobacterium alterfunditum
+---------------------------------------AAGAGUUU-GAU-CCUGGCUCAGGACGAAN-GC-UGGC-GGC-A-UG--C-CUAAUACAU-GCAAGU-CGA-ACGC-UU---UGA---------CUUCA-------------------------------CCGGGUG----------------------------------CUUG----------------------------------CACCCACCGAAG-------------------------------------------UCA--AG--GAG-UGG-C-GG--A-CGGGUGAGU---AAC-ACGUGGG-UAA--CCU-GC-CCAUAAGA-GG--GGGAU-AA-CAUUC-G-GAAA-CGG-AUG-CUAAUACC-G-CAU-AU-----U-UCU-A--A-AC--GUC---------------------------------------------------------------------------------------------A-CAU------------------------------------------------------------------------------------GAC--G-A--A--UA-GAA-GAAA--GG-U-GG-C----------------UUCG----------------GCUA-CC-G--C----------UU----------AUGG---AUG-G-ACCCGCGG-CGU--A------UU-A-G-CU-A-G---UUGGUG-AG-G-UAAU-GG-CUCACCAA-GGCG-AUG-AUACGUAGCCGACCU-G-AG-------------A-GGGU-GAUC-GGCCACACUGGGA-CUGA-GA-CNCG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UAGGG-AAUCUUCCG--------------------CAAU-GGAC-GAAA-GUCUGACGGAGCAAUGCCGCG-UGA-GU-GA-AGAA-GGUU--UU-CG-GA-UCGUAAA------------------------ACUCUGUU-GU-UAGA-GAA-G--A---AC-AAGG-AUGAGA-------G-----U-AA-C-----U---GC-UCAU-CCC-CU-GA-CGGU-A-U-CU--A-ACC---------AG-AAAGC-CAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GUGGCA-A-GCG-UUGUC-CGGAUUUAUUGGGCGUAAAGCGAGCG-CAG-G-CGGUUC-UUUAAG-UCUG-AUGUG-AAA-GC-CCCCGG-CUC-AA-CCGGGG-AAG-G-------------------------------------------UC-A-U----------------------------------------------UGGA-AAC-UGGGG-AAC-U-U-G-AG-UG-----CAGAAG-AGGAG-AGU-GGAAUU-CCA--------------------CGU-GUA-GCG-GUGAAA-UG-C-GUAGAU-AUGUGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGA--CUCUCUG------GUCUG--------------------------------------------------------------UAA-CU--GACG-----CUGA-GG--CUCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AGUG-CUAAGUG-UUGGAGGG--U---UUCC---------------------------------GC-CCUUCAG-UGCU-GCA-GCUAACGCAU-UAA-GCAC-UCCGCCUG-GGGAGUACGACC-GCAA-GGUU-GAA-ACUC-AAA-GGAAUUG-ACGGGGA-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCAGGUC-UUGACA-UC--------------CUUUG------A-CA-A-C-CCUA-GAGA-U-AG-G-GCUU--UC-----CC-----------------------------------------UUCG----------------------------------------------------------------GG----GA---CA-AAG-U-GA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-CU-CCCGCAAC-GAGCGCAACC-CCUA-UU--AUUAG---U-U-GC-C-AG-CA--U--------------------------------UCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AGU-GAGAC-U-GCCG-GU-G-A-UAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--AC-C-U-GGGCUACACACGUGCUACAAUGG-AUGGUA--C-AAC-GAGU-C-GC-A-A-A-GUCG-CG-AGGC-U-----------AA-G-CUAA-UCU-CU-U-AAAGCCA-UUC-UCAGUUCGGA-UUGUAGGC-U-GCAACUC-GCCUGCA-UGAAGCCGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAC-GCCGCGGUG-AAU-ACGUU-CCCGGGUCUUGUA----CACACCGCCCGUC-ACA--CCACGAGA-GUUNGUGGCACCC-GAAG-UCGG-UGA-G-GU-AA-CCC---------------------------------UUU-U-------------------------------------GGGAGC-C-AGCCGC-CUAAGGUGGGACAGA-UA-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAUCGGAAGGUG-CGGC-UGGAUCACCUC--------------------------------------------------------------------------------------------
+>StaAure4 Staphylococcus aureus
+--------------------------------UUUUAUGGAGAGUUU-GAU-CCUGGCUCAGGAUGAAC-GC-UGGC-GGC-G-UG--C-CUAAUACAU-GCAAGU-CGA-GCGA-AC---GGA---------------------------------------------CGAGAAG----------------------------------CUUG----------------------------------CUUCUCU------------------------------------------------GAU--GU--UAG-CGG-C-GG--A-CGGGUGAGU---AAC-ACGUGGA-UAA--CCU-AC-CUAUAAGA-CU--GGGAU-AA-CUUCG-G-GAAA-CCG-GAG-CUAAUACC-G-GAU-AA---U-A-UUU-U--G-A---ACC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GGU----U--C--AA-AAGUGAAA--GA-C-GG-U----------------CUU-----------------GCUG-UC-A--C----------UU----------AUAG---AUG-G-AUCCGCGC-UGC--A------UU-A-G-CU-A-G---UUGGUA-AG-G-UAAC-GG-CUUACCAA-GGCA-ACG-AUACGUAGCCGACCU-G-AG-------------A-GGGU-GAUC-GGCCACACUGGAA-CUGA-GA-CACG-GUCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UAGGG-AAUCUUCCG--------------------CAAU-GGGC-GAAA-GCCUGACGGAGCAACGCCGCG-UGA-GU-GA-UGAA-GGUC--UU-CG-GA-UCGUAAA------------------------ACUCUGUU-AU-UAGG-GAA-G--A---AC-AUAU-GUGUAA-------G-----U-AA-C-----U---GU-GCAC-AUC-UU-GA-CGGU-A-C-CU--A-AUC---------AG-AAAGC-CAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GUGGCA-A-GCG-UUAUC-CGGAAUUAUUGGGCGUAAAGCGCGCG-UAG-G-CGGUUU-UUUAAG-UCUG-AUGUG-AAA-GC-CCACGG-CUC-AA-CCGUGG-AGG-G-------------------------------------------UC-A-U----------------------------------------------UGGA-AAC-UGGAA-AAC-U-U-G-AG-UG-----CAGAAG-AGGAA-AGU-GGAAUU-CCA--------------------UGU-GUA-GCG-GUGAAA-UG-C-GCAGAG-AUAUGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGA--CUUUCUG------GUCUG--------------------------------------------------------------UAA-CU--GACG-----CUGA-UG--UGCGAAA-G-C-GUGGG-GAUC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AGUG-CUAAGUG-UUAGGGGG--U---UUCC---------------------------------GC-CCCUUAG-UGCU-GCA-GCUAACGCAU-UAA-GCAC-UCCGCCUG-GGGAGUACGACC-GCAA-GGUU-GAA-ACUC-AAA-GGAAUUG-ACGGGGA-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCAAAUC-UUGACA-UC--------------CUUUG------A-CA-A-C-UCUA-GAGA-U-AG-A-GCCU--UCC----CC-----------------------------------------UUCG----------------------------------------------------------------GG---GGA---CA-AAG-U-GA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUA-AG--CUUAG---U-U-GC-C-AU-CA--U--------------------------------UAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AAG-UUGAC-U-GCCG-GU-G-A-CAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--AU-U-U-GGGCUACACACGUGCUACAAUGG-ACAAUA--C-AAA-GGGC-A-GC-G-A-A-ACCG-CG-AGGU-C-----------AA-G-CAAA-UCC-CA-U-AAAGUUG-UUC-UCAGUUCGGA-UUGUAGUC-U-GCAACUC-GACUACA-UGAAGCUGGAAU-CGCUAGUA-AUCGU-AGA-UC-AG-CAU-GCUACGGUG-AAU-ACGUU-CCCGGGUAUUGUA----CACACCGCCCGUC-ACA--CCACGAGA-GUUUGUAACACCC-GAAG-CCGG-UGG-A-GU-AA-CCU---------------------------------UUU---------------------------------------AGGAGC-U-AGCCGU-CGAAGGUGGGACAAA-UG-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAUCGGAAGGUG-CGGC-UGGAUCACCUCCUUUCU--------------------------------------------------------------------------------------
+>BaiStea2 Bacillus stearothermophilus
+---------------------------------------NAGAGUUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-CUAAUACAU-GCAAGU-CGA-GCG--GA---CCA-------------A-------------------------------AAUCGAG----------------------------------CUUG----------------------------------CUCUGAUU-----------------------------------------------UGG--UC---AG-CGG-C-GG--A-CGGGUGAGU---AAC-ACGUGGG-CAA--CCU-GC-CCGCAAGA-CC--GGGAU-AA-CUCCG-G-GAAA-CCG-GAG-CUAAUACC-G-GAU-AA---C-A-CCG-A--A-G---ACC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GGU----C--U--UU-GGUUGAAA--GG-C-GG-C----------------UUUG----------------GCUG-UC-A--C----------UU----------GCGG---AUG-G-GCCCGCGG-CGC--A------UU-A-G-CU-A-G---UUGGUG-AG-G-UAAC-GG-CUCACCAA-GGCG-ACG-AUGCGUAGCCGGCCU-G-AG-------------A-GGGU-GACC-GGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UAGGG-AAUCUUCCG--------------------CAAU-GG-C-GAAA-G-CUGACGGAGCGACGCCGCG-UGA-GC-GA-AGAA-GGCC--UU-CG-GG-UCGUAAA------------------------GCUCUGUU-GU-GAGG-GAC-G--A---AG-GGGC-GCCGUU-------C-----G-AA-GA----G---GG-CGGC-GCC-UU-GA-CGGU-A-C-CU--C-ACG---------AG-GAAGC-CCC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GGGGCG-A-GCG-UUGUC-CGGAAUUAUUGGGCGUAAAGCGCGCG-CAG-G-CGGUCC-CUUAAG-UCUG-AUGUG-AAA-GC-CCACGG-CUC-AA-CCGUGG-AGG-G-------------------------------------------UC-A-U----------------------------------------------UGGA-AAC-UGGGG-GAC-U-U-G-AG-UG-----CAGGAG-AGGAG-AGC-GGAAUU-CCA--------------------CGU-GUA-GCG-GUGAAA-UG-C-GUAGAG-AUGUGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGG--CUCUCUG------GCCUG--------------------------------------------------------------CAA-CU--GACG-----CUGA-GG--CGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AGUG-CUAAGUG-UUAGAGGG--G---UCAC---------------------------------AC-CCUUUAG-UGCU-GCA-GCUAACGCGA-UAA-GCAC-UCCGCCUG-GGGAGUACGGCC-GCAA-GGCU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCAGGUC-UUGACA-UC--------------CCCUG------A-CA-A-C-CCAA-GAGA-U-UG-G-GCGU--UC-----CC-----------------------------------------UUCG----------------------------------------------------------------GG---GGG---CA-CGG-U-GA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-CC--UCUAG---U-U-GC-C-AG-CA--U--------------------------------UCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AGA-GGGAC-U-GCCG-GC-G-A-CAA-GUC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--AC-C-U-GGGCUACACACGUGCUACAAUGG-GCGGUA--C-AAA-GGGU-U-GC-G-A-A-CCCG-CG-AGGG-G-----------GA-G-CGAA-UCC-CA-A-AAAGCCG-CUC-UCAGUUCGGA-UUGCAGGC-U-GCAACUC-GCCUGCA-UGAAGCUGGAAU-CGCUAGUA-AUCNC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCACGAGA-GCUUGCAACACCC-GAAG-UCGG-UGA-G-GC-AA-CCC---------------------------------GCA-A--------------------------------------GGAGC-C-AGCCGC-CGAAGGUGGGGCAAG-UG-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUACCGGAAGGUG-CGGC-UGGAUCACCUCCUUUCU--------------------------------------------------------------------------------------
+>HafMedi2 Haloferax mediterranei
+--------------------------------------AUUCCGGUU-GAU-CCUGCCGGAGGUC-AUU-GC-UAUU-GGG-GUCC--GAUUUAGCCAU-GCUAGU-UGC-ACGA-GU--------------------------------------------------------------------------------------------UCAC----------------------------------------------------------------------------------------------AC--UCG-UGG-C-GA--A-AAGCUCAGU---AAC-ACGUGGC-CAA--ACU-AC-CCUACAGA-GA--ACGAU-AA-CCUCG-G-GAAA-CUG-AGG-CUAAUAGU-U-CAU-A------C-GGG-A--G-UC-AUGC--------------------------------------------------------------------------------------------UU-GAAU-----------------------------------------------------------------------------------GCC--G-A--C--UC-CCC-GAAA-CGC-----------------------UCCG---------------------GC-G--C----------UG----------UAGG---AUG-U-GGCUGCGG-CCG--A------UU-A-G-GU-A-G---ACGGUG-GG-G-UAAC-GG-CCCACCGU-GCCA-AUA-AUCGGUACGGGUUGU-G-AG-------------A-ACAA-GAGC-CCGGAGACGGAAU-CUGA-GA-CAAG-AUUCCGG-GCC-C-UACG--GGGC-GC-A-GC-A-G-GCGCG-AAACCUUUA--------------------CACU-GCAC-GCAA-GUGCGAUAAGGGGACCCCAAG-UGC-GA-G-----G-GC----AUAUA----GUC--C-------------------------UCGCUUUU-CU-CGAC-U-------------------------------G-----U-AA-GG----C--------------------------G-G-UC--G-AGG---------AA-UAAGA-GCUGGGCAAGA-CCGGU---GCCAGCCGCCG-CGGUAAU-AC-CGG-CAGCUCA-A-GUG-AUGAC-CGAUAUUAUUGGGCCUAAAGCGUCCG-UAG-C-CGGCCA-UGAAGG-UUCA-UCGGG-AAA-UC-CGCCAG-CUC-AA-CUGGCG-GGCGU-------------------------------------------CC-G-G----------------------------------------------UGAA-AAC-CACAU-GGC-U-U-G-GG-AC-----CGGAAG-GCUCG-AGG-GGUACG-UCU--------------------GGG-GUA-GGA-GUGAAA-UC-C-UGUAAU-CCUGGACGG-ACC-A-CCGA--U-G-GCGAAAGCAC--CUCGAGA------AGACG--------------------------------------------------------------GAU-CC--GACGG-----UGA-GG--GACGAAA-G-C-UAGGG-UCUC-GAACCGG-AUUAGAUAC-----CCGGGUAG-UCCUA-GCUGUAAACGAUG-CUCG-CUAGGUG-UGGCACAG--GC-UACGA--------------------------------GCC-UGUCUUG-UGCC-GUA-GGGAAGCCGU-GAA-GCGA-GCCGCCUG-GGAAGUACGUCC-GCAA-GGAU-GAA-ACUU-AAA-GGAAUUG-GCGGGGG-AGC--ACUA--CA-A-CCG-GAGGAG-CC-UGCGGU-UUAAUUG-G-ACUCAACG-CCGGA-CA-UCUCA-CCAGCUC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACUACAGUAAUGACGGUCAGGUUGAUGACCUUACCACGACGCUGUAGAGAGGA-GGUGCAUGGCCGCCGUCA-GCUCGUACC-GUGA-GGCGU-CCUG-UUAA-GU-CAGGCAAC-GAGCGAGACC-CGCA-CU--UCUAA---U-U-GC-C-AG-CA--A--CAGU--------------------------UUCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACU---GGUUGGG-UACA-U-U-AGA-AGGAC-U-GCCG-CU-G-C-UAA-AGC-G--GAGG-A-AGG-A-ACGG-GCAACGGU--AGGUCAGUAU-G-CC-CCGAAUG--AG-C-U-GGGCUACACGCGGGCUACAAUGG-UCAAGA--C-AAU-GGGU-U-GC-U-A-U-CUCG-AA-AGAG-A-----------AC-G-CUAA-UCU-CC-U-AAACUUG-AUC-GUAGUUCGGA-UUGAGGAC-U-GAAACUC-GUCCUCA-UGAAGCUGGAUU-CGGUAGUA-AUCGC-AUU-UC-ACA-AG-AGUGCGGUG-AAU-ACGUC-CCUGCUCCUUGCA----CACACCGCCCGUC-AAA--GCACCCGA-GUGAGGUCCGGAU-GA-G-GCCA-C-C---------------------------------------------ACA-C----------------------------------------------GGUGGU-CGAAUCUGG-CUUCG-CA-AGG-GGGCUU-AAGUCGUAACAAGGUAGCCGUAGGGGAAUCUG-CGGC-UGGAUCACCUCCU------------------------------------------------------------------------------------------
+>BorBur13 Borrelia burgdorferi
+---------------------------------AUAACGAAGAGUUU-GAU-CCUGGCUUAGAACUAAC-GC-UGGC-AGU-G-CG--U-CUUAAGCAU-GCAAGU-CAA-ACGG-GA---UGU---------------------------------------------------A----------------------------------GCAA----------------------------------U------------------------------------------------------ACA--UU--CAG-UGG-C-GA--A-CGGGUGAGU---AAC-GCGUGGA-UGA--UCU-AC-CUAUGAGA-UG--GGGAU-AA-CUAUU-A-GAAA-UAG-UAG-CUAAUACC-G-AAU-AA---G-G-UCA-G--U-----UAA---------------------------------------------------------------------------------------------U-UUG------------------------------------------------------------------------------------UUA-------A--UU-GAU-GAAA--GG-A-AG----------------CCUUUAAA--------------GCUC-UC-G--C----------UU----------GUAG---AUG-A-GUCUGCGU-CUU--A------UU-A-G-CU-A-G---UUGGUA-GG-G-UAAA-UG-CCUACCAA-GGCA-AUG-AUAAGUAACCGGCCU-G-AG-------------A-GGGU-GAAC-GGUCACACUGGAA-CUGA-GA-UACG-GUCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-CUAAG-AAUCUUCCG--------------------CAAU-GGGC-GGAA-GCCUGACGGAGCGACACUGCG-UGA-AU-GA-AGAA-GGUC--GA-AA-GA-UUGUAAA------------------------AUUCUUUU-AU-AAAU-GAG-G--A---AU-AAGC-UUUGUA-------G-----G-AA-A-----U---GA-CAAA-GUG-AU-GA-CGUU-A-A-UU--U-AUG---------AA-UAAGC-CCC-GGCUAAU-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAA-GGGGCG-A-GCG-UUGUU-CGGGAUUAUUGGGCGUAAAGGGUGAG-UAG-G-CGGAUA-UAUAAG-UCUAUGCAUA-AAA-UA-CCACAG-CUC-AA-CUGUGG-ACC-U-------------------------------------------AU-G-U----------------------------------------------UGGA-AAC-UAUAU-GUC-U-A-G-AG-UC-----UGAUAG-AGGAA-GUU-AGAAUU-UCU--------------------GGU-GUA-AGG-GUGGAA-UC-U-GUUGAU-AUCAGAAAG-AAU-A-CCGG--A-G-GCGAAGGCGA--ACUUCUG------GGUCA--------------------------------------------------------------AGA-CU--GACG-----CUGA-GU--CACGAAA-G-C-GUAGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCUAC-GCUGUAAACGAUG-CACA-CUUGGUG-UUAACU--------AAA--------------------------------------AGUUAG-UACC-GAA-GCUAACGUGU-UAA-GUGU-GCCGCCUG-GGGAGUAUGCUC-GCAA-GAGU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AUGAUACG-CGAGG-AA-CCUUA-CCAGGGC-UUGACA-UA------------U-AUAGG------A-UA-U-A-GUUA-GAGA-U-AA-U-UAUU--CC-----CC-----------------------------------------GUUU----------------------------------------------------------------GG----GG---UC-UAU-A-UA--------------------------------------------------CAGGU-GCUGCAUGGUUGUCGUCA-GCUCGUGCU-GUGA-GGUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-UU--AUCUG---U-U-AC-C-AG-CA--U-------------------------------GUAAUG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUGGG-GACU-C-A-GAU-AAGAC-U-GCCG-GU-G-A-UAA-GUC-G--GAGG-A-AGG-U-GAGG-AUGACGUC--AAAUCAUCAU-G-GC-CCUUAUG--UC-C-U-GGGCUACACACGUGCUACAAUGG-CCUGUA--C-AAA-GCGA-A-GC-G-A-A-ACAG-UG-AUGU-G-----------AA-G-CAAA-ACG-CA-U-AAAGCAG-GUC-UCAGUCCGGA-UUGAAGUC-U-GAAACUC-GACUUCA-UGAAGUUGGAAU-CGCUAGUA-AUCGU-AUA-UC-AG-AAU-GAUACGGUG-AAU-ACGUU-CUCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCACCCGA-GUUGAGGAUACCC-GAAG-CUAU-UAU-U-CU-AA-CCC---------------------------------GUA-A-------------------------------------GGGAGG-A-AGGUAU-UUAAGGUAUGUUUAG-UG-AGG-GGGGUG-AAGUCGUAACAAGGUAGCCGUACUGGAAAGUG-CGGC-UGGAUCACCUCCUUU----------------------------------------------------------------------------------------
+>StaHaem3 Staphylococcus haemolyticus
+----------------------------------------AGAGUUU-GAU-U--GGCUCAGGAUGAAC-GC-UGGC-GGC-G-UG--C-CUAAUACAU-GCAAGU-CGA-GCGA-AC---AGA---------------------------------------------CAAGGAG----------------------------------CUUG----------------------------------CUCCUUU------------------------------------------------GAC--GU--UAG-CGG-C-GG--A-CGGGUGAGU---AAC-ACGUGGG-UAA--CCU-AC-CUAUAAGA-CU--GGGAU-AA-CUUCG-G-GAAA-CCG-GAG-CUAAUACC-G-GAU-AA---U-A-UUU-C--G-A---ACC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GGU----U--C--GA-UAGUGAAA--GA-U-GG-U----------------UUU-----------------GCUA-UC-A--C----------UU----------AUAG---AUG-G-ACCCGCGC-CGU--A------UU-A-G-CU-A-G---UUGGUA-AG-G-UAAC-GG-CUUACCAA-GGCG-ACG-AUACGUAGCCGACCU-G-AG-------------A-GGGU-GAUC-GGCCACACUGGAA-CUGA-GA-CACG-GUCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UAGGG-AAUCUUCCG--------------------CAAU-GGGC-GAAA-GCCUGACGGAGCAACGCCGCG-UGA-GU-GA-UGAA-GGUC--UU-CG-GA-UCGUAAA------------------------ACUCUGUU-AU-UAGG-GAA-G--A---AC-AUAC-GUGUAA-------G-----U-AA-C-----U---AU-GCAC-GUC-UU-GA-CGGU-A-C-CU--A-AUC---------AG-AAAGC-CAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GUGGCA-A-GCG-UUAUC-CGGAAUUAUUGGGCGUAAAGCGCGCG-UAG-G-CGGUUU-UUUAAG-UCUG-AUGUG-AAA-GC-CCACGG-CUC-AA-CCGUGG-AGG-G-------------------------------------------UC-A-U----------------------------------------------UGGA-AAC-UGUAA-AAC-U-U-G-AG-UG-----CAGAAG-AGGAA-AGU-GGAAUU-CCA--------------------UGU-GUA-GCG-GUGAAA-UG-C-GCAGAG-AUAUGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGA--CUUUCUG------GUCUC--------------------------------------------------------------UAA-CU--GACG-----CUGA-UG--UGCGAAA-G-C-GUGGG-GAUC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AGUG-CUAAGUG-UUAGGGGG--U---UUCC---------------------------------GC-CCCUUAG-UGCU-GCA-GCUAACGCAU-UAA-GCAC-UCCGCCUG-GGGAGUACGACC-GCAA-GGUU-GAA-ACUC-AAA-GGAAUUG-ACGGGGA-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAAGU-GUAAG-AA-CCUUA-CCAAAUC-UUGACA-UC--------------CUUUG------A-CA-A-C-UCUA-GAGA-U-AG-A-GCC---UU-----CC-----------------------------------------UUCG----------------------------------------------------------------GG---GGA---CA-AAG-U-GA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUA-AG--CUUAG---U-U-GC-C-AU-CA--U--------------------------------UAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AAG-UUGAC-U-GCCG-GU-G-A-CAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--AU-U-U-GGGCUACACACGUGCUACAAUGG-ACAAUA--C-AAA-GGGC-A-GC-G-A-A-ACCG-CG-AGGU-C-----------AA-G-CAAA-UCC-CA-U-AAAGUUG-UUC-UCAGUUCGGA-UUGUAGUC-U-GCAACUC-GACUACA-UGAAGCUGGAAU-CGCUAGUA-AUCGU-AGA-UC-AG-CAU-GCUACGGUG-AAU-ACGUU-CCCGGGUCUUGUA----CACACCGCCCGUC-ACA--CCACGAGA-GUUUGUAACACCC-GAAG-CCGG-UGG-A-GU-AA-CCA---------------------------------UU----------------------------------------UGGAGC-U-AGCCGU-CGAAGGUGGGACAAA-UG-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAUCGGAAGGUG-CGGC-UGGAUCACCUCCUUUCU--------------------------------------------------------------------------------------
+>SaaTher2 Saccharococcus thermophilus
+----------------------------------------AGAGUUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-CUAAUACAU-GCAAGU-CGA-GCGG-AC---CGA----------------------------------------------U-AGAG----------------------------------CUUG----------------------------------CUCUUGU------------------------------------------------UCG--UU---AG-CGG-C-GG--A-CGGGUGAGU---AAC-ACGUGGG-CAA--CCU-AC-CCGUAAGA-CC--GGGAU-AA-CUCCG-G-GAAA-CCG-GAG-CUAAUACC-G-GAU-AA---C-A-CCG-A--G-----ACC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GUC-------U--UC-GGU-GAAA--GG-C-GG-C----------------UUNG----------------UCUG-UC-A--C----------UU----------ACGG---AUG-G-GCCCGCGG-CGC--A------UU-A-G-CU-A-G---UUGGUG-AG-G-UAAC-GG-CUCACCAA-GGCG-ACG-AUGCGUAGCCGGCCU-G-AG-------------A-GGGU-GACC-GGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UAGGG-AAUCUUCCG--------------------CAAU-GGAC-GAAA-GUCUGACGGAGCGACGCCGCG-UGA-GC-GA-AGAA-GGUC--UU-CG-GA-UCGUAAA------------------------GC-CUGUU-GU-UAGG-GAA-G--A---AC-AAGU-ACCGUU-------C-----G-AA-UA----G---GG-CGGU-ACC-GU-GA-CGGU-A-C-CU--A-ACG---------AG-AAAGC-CCC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GGGGCG-A-GCG-UUGUC-CGGAAUUAUUGGGCGUAAAGCGCGCG-CAG-G-CGGUCC-CUUAAG-UCUG-AUGUG-AAA-GC-CCACGG-CUC-AA-CCGUGG-AGG-G-------------------------------------------UC-A-U----------------------------------------------UGGA-AAC-UGGGG-GAC-U-U-G-AG-UG-----CAGAAG-AGGAG-AGC-GGAAUU-CCA--------------------CGU-GUA-GCG-GUGAAA-UG-C-GUAGAG-AUGUGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGG--CUCUCUG------GUCUG--------------------------------------------------------------CAA-CU--GACG-----CUGA-GG--CGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AGUG-CUAAGUG-UUAGAGGG------UCAA----------------------------------C-CCUUUAG-UGCU-GCA-GCUAACGCGU-UAA-GCAC-UCCGCCUG-GGGAGUACGGCC-GCAA-GGCU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCAGGUC-UUGACA-UC--------------CCCUG------A-CA-A-C-CCUA-GAGA-U-AG-G-CGUU--CC-----CC-----------------------------------------UUCG----------------------------------------------------------------GG----GG---AC-AGG-U-GA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUCG-AC--CUUAG---U-U-GC-C-AG-CA--U--------------------------------UCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AAG-GUGAC-U-GCCG-GU-G-A-CAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--AC-C-U-GGGCUACACACGUGCUACAAUGG-GCGGUA--C-AAA-GGGC-U-GC-G-A-A-ACCG-CG-AGGG-G-----------GA-G-CCAA-UCC-CA---AAAGCCG-CUC-UCAGUUCGGA-UUGCAGGC-U-GCAACUC-GCCUGCA-UGAAGCCGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUN-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCACGAGA-GCUUGCAACACCC-GAAG-UCGG-UGA-G-GU-AA-CCU---------------------------------UUC-U--------------------------------------GGAGC-C-AGCCGC-CGAAGGUGGGGCAGA-UG-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUACCGGAAGGUG-CGGC-UGGAUGACCUCCUUUCU--------------------------------------------------------------------------------------
+>MyoTuber Mycobacterium tuberculosis 3
+-------------------------------UUUGUUUGGAGAGUUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-UUAACACAU-GCAAGU-CGA-ACG--GAAA-G-G------------------------------------------------UCUC----------------------------------UUCG----------------------------------GAGA---------------------------------------------------UAC--UC--GAG-UGG-C-GA--A-CGGGUGAGU---AAC-ACGUGGG-UGA--UCU-GC-CCUGCACU-UC--GGGAU-AA-GCCUG-G-GAAA-CUG-GGU-CUAAUACC-G-GAU-AG---G-A-CCA-C--G-G---GAU---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GUC----U--U--GU-GGUGGAAA--GC-G---------------------CUUU-------------------A-GC-G--G----------UG----------UGGG---AUG-A-GCCCGCGG-CCU--A------UC-A-G-CU-U-G---UUGGUG-GG-G-UGAC-GG-CCUACCAA-GGCG-ACG-ACGGGUAGCCGGCCU-G-AG-------------A-GGGU-GUCC-GGCCACACUGGGA-CUGA-GA-UACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCA--------------------CAAU-GGGC-GCAA-GCCUGAUGCAGCGACGCCGCG-UGG-GG-GA-UGAC-GGCC--UU-CG-GG-UUGUAAA------------------------CCUCUUUC-AC-CAUC-GAC-G--A-A-GG--UCC-GGG----------------U-UC-U-------------CUC-GGA-UU-GA-CGGU-A-G-GU--G-GAG---------AA-GAAGC-ACC-GGCCAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GGUGCG-A-GCG-UUGUC-CGGAAUUACUGGGCGUAAAGAGCUCG-UAG-G-UGGUUU-GUCGCG-UUGU-UCGUG-AAA-UC-UCACGG-CUU-AA-CUGUGA-GCG-U-------------------------------------------GC-G-G----------------------------------------------GCGA-UAC-GGGCA-GAC-U-A-G-AG-UA-----CUGCAG-GGGAG-ACU-GGAAUU-CCU--------------------GGU-GUA-GCG-GUGGAA-UG-C-GCAGAU-AUCAGGAGG-AAC-A-CCGG--U-G-GCGAAGGCGG--GUCUCUG------GGCAG--------------------------------------------------------------UAA-CU--GACG-----CUGA-GG--AGCGAAA-G-C-GUGGG-GAGC-GAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGGUG-GGUA-CUAGGUG-UGGGUUUC----CUUCCU-U--------------------------------G-GGAUCCG-UGCC-GUA-GCUAACGCAU-UAA-GUAC-CCCGCCUG-GGGAGUACGGCC-GCAA-GGCU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GCGGAG-CA-UGUGGA-UUAAUUC-G-AUGCAACG-CGAAG-AA-CCUUA-CCUGGGU-UUGACA-UG------------C-ACAGG------A-CG-C-G-UCUA-GAGA-U-AG-G-CGUU--C------CC-----------------------------------------UUGU----------------------------------------------------------------GG---------CC-UGU-G-UG--------------------------------------------------CAGGU-GGUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-UC--UCAUG---U-U-GC-C-AG-CA--C-------------------------------GUAAUG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUGGG-GACU-C-G-UGA-GAGAC-U-GCCG-GG-G-U-CAA-CUC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCAUCAU-G-CC-CCUUAUG--UC-C-A-GGGCUUCACACAUGCUACAAUGG-CCGGUA--C-AAA-GGGC-U-GC-G-A-U-GCCG-CG-AGGU-U-----------AA-G-CGAA-UCC-UU-A-AAAGCCG-GUC-UCAGUUCGGA-UCGGGGUC-U-GCAACUC-GACCCCG-UGAAGUCGGAGU-CGCUAGUA-AUCGC-AGA-UC-AGCAAC-GCUGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACG--UCAUGAAA-GUCGGUAACACCC-GAAG-CCAG-UGG-C-CU-AA-CC----------------------------------CUC-G--------------------------------------GGAGG-G-AGCUGU-CGAAGGUGGGAUCGG-CG-AUU-GGGACG-AAGUCGUAACAAGGUAGCCGUACCGGAAGGUG-CGGC-UGGAUCACCUCCUUUCU--------------------------------------------------------------------------------------
+>LaoTherm Lactobacter thermoamylovorans
+----------------------------------------AGAGUUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-CUAAUACAU-GCAAGU-CGA-GCGA-AC---CAA---------------------------------------------UAAGAAG----------------------------------CUUG----------------------------------CUUUUUG------------------------------------------------UUG--GU--UAA-CGG-C-GG--A-CGGGUGAGU---AAC-ACGUGGG-UAA--CCU-GC-CUGUAAGA-CC--GGGAU-AA-CUCCG-G-GAAA-CCG-GUG-CUAAUACC-G-GAU-AG---A-U-UAU-C--U-U---UCC---------------------------------------------------------------------------------------------G-CCU------------------------------------------------------------------------------------GGA--G-A--G--AU-AAG-GAAA--GA-U-GG-C----------------UUUU----------------GCCA-UC-A--C----------UU----------ACAG---AUG-G-GCCCGCGG-CGC--A------UU-A-G-CU-A-G---UUGGUG-AG-G-UAAU-GG-CUCACCAA-GGCG-ACG-AUGCGUAGCCGACCU-G-AG-------------A-GGGU-GAUC-GGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UAGGG-AAUCUUCCG--------------------CAAU-GGAC-GAAA-GUCUGACGGAGCAACGCCGCG-UGA-GC-GA-AGAA-GGUC--UU-CG-GA-UCGUAAA------------------------GCUCUGUU-GU-UAGG-GAA-G--A---AC-AAGU-AUCGGA-------G-----G-AA-A-----U---GC-CGGU-ACC-UU-GA-CGGU-A-C-CU--G-ACG---------AG-AAAGC-CAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GGUGCA-A-GCG-UUGUC-CGGAUUUAUUGGGCGUAAAGCGCGCG-CAG-G-CGGUCC-UUUAAG-UCUG-AUGUG-AAA-UC-UUGCGG-CUC-AA-CCGCAA-GCG-G-------------------------------------------UC-A-U----------------------------------------------UGGA-AAC-UGGGG-GAC-U-U-G-AG-UG-----CAGAAG-AGGAA-AGC-GGAAUU-CCA--------------------CGU-GUA-GCG-GUGAAA-UG-C-GUAGAG-AUGUGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGG--CUUUCUG------GUCUG--------------------------------------------------------------UAA-CU--GACG-----CUGA-GG--CGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AGUG-CUAAGUG-UUGGAGGG--U---UUCC---------------------------------GC-CCUUCAG-UGCU-GCA-GCUAACGCAU-UAA-GCAC-UCCGCCUG-GGGAGUACGGNN-GCAA-GCCU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCAGGUC-UUGACA-UC--------------UCCUG------A-CC-C-C-CCUG-GAGA-C-AG-G-GUCU--UC-----CC-----------------------------------------UUCG----------------------------------------------------------------GG----GA---CA-GGA-U-GA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-GU--UCUAG---U-U-GC-C-AG-CA--U--------------------------------UCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CUGGG-CACU-C-U-AGA-GCGAC-U-GCCG-GC-G-A-CAA-GUC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--AC-C-U-GGGCUACACACGUGCUACAAUGG-AUGGUA--C-AAA-GGGC-A-GC-G-A-A-GCGG-CG-ACGCAU-----------GA-G-CGAA-UCC-CA-G-AAAACCA-UUC-UCAGUUCGGA-UUGCAGGC-U-GCAACUC-GCCUGCA-UGAAGCCGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCACGAGA-GUUUGUAACACCC-GAAG-UCGG-UGA-G-GU-AA-CC----------------------------------GUA-A--------------------------------------GGAGC-C-AGCCGC-CGAAGGUGGGACAGA-UG-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAUCGGAAGGUG-CGGC-UGGAUCACCUCCUUA----------------------------------------------------------------------------------------
+>KieCrith Kinetoplast crithidii
+--------------------------------UGUAAUCCAGAGUUU-GAU-CCUGGCUCAGAUUGAAC-GC-UAGC-GGA-A-UG--C-UUUACACAU-GCAAGU-CGA-ACG--GCAG-CAC------------------------------------------------GAAC----------------------------------UUCG----------------------------------GUUU-------------------------------------------------G-GUG--GC--GAG-UGG-C-GG--A-CGGGUGAGU---AAU-AUAUCGG-A-A--CGU-GC-CCAGUAGA-GG--GGGAU-AA-CUACG-C-GAAA-GCG-U-G-CUAAUACC-G-CAU-AU---U----------------CCC---------------------------------------------------------------------------------------------U-AAG------------------------------------------------------------------------------------GGG-----------------GAAA--GC-G-GG-G-GA-U-C---------UUCG-----------GA---CCUC-GC-G--C----------UA----------UUGG---AUC-G-GCCGAUAU-CGG--A------UU-A-G-CU-A-G---UUGGUG-AG-G-UAAU-GG-CUCACCAA-GGCG-ACG-AUCCGUAGCUGGUCU-G-AG-------------A-GGAC-GACC-AGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUUUUGGA--------------------CAAU-GGGG-GAAA-CCCUGAUCCAGCCAUUCCGCG-UGU-GC-GA-UGAA-GGCC--UU-AG-GG-UUGUAAA------------------------GCACUUUU-GG-CAGG-GAA-G------AA-AUAG-CAUUGG-------C-----U-AA-UA----U---CU-GAUG-UGA-AU-GA-CGGU-A-C-CU--G-CAG---------AA-UAAGC-ACC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GGUGCG-A-GCG-UUAAU-CGGAAUUACUGGGCGUAAAGAGUGCG-CAG-G-CGGUUC-GGAAAG-AAAG-AUGUG-AAA-UC-CCAGGG-CUU-AA-CCUUGG-AAC-U-------------------------------------------GC-A-U----------------------------------------------UUUU-GAC-UACCG-AAC-U-A-G-AG-UG-----UACCAG-AGGGA-GGU-AGAAUU-CCG--------------------CAU-GUA-GCA-GUGAAA-UG-C-GUAGAU-AUGCGGAGG-AAC-A-CCUA--U-G-GCGAAGGCAG--CCUCCUG------GGGUA--------------------------------------------------------------ACA-CU--GACG-----CUCA-UG--CACGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCCUAAACGAUG-UCAA-CUAGCUG-UUGGGAUC------UUCG----------------------------------G-AUCUUAG-UAGC-GCA-GCUAACGCGU-GAA-GUUG-ACCGCCUG-GGGAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGA-CCC--GC-A--CA-A-GCG-GUGGAU-GA-UGUGGA-UUAAUUC-G-AUGCAACG-CGAAA-AA-CCUUA-CCUACCC-UUGACA-UG--------------UCUAG------A-AU-C-C-CGAA-GAGA-U-UU-G-GGAG--UGC----UU-----------------------------------------GCAA----------------------------------------------------------------AA---GAA---CU-AGA-A-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-UC--AUUAG---U-U-GC-U-A--C------------------------------------GAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGG-CACU-C-U-AAU-GAGAC-U-GCCG-GU-G-A-CAA-ACC-G--CAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUAUG--GG-U-A-GGGCUUCACACGUCAUACAAUGG-UCGGGA--C-AGA-GGGC-U-GC-C-A-A-CCCG-CG-AGGG-G-----------GA-G-CUAA-UCC-CA-C-AAACCCG-AUC-GUAGUCCGGA-UCGUAGUC-U-GCAACUC-GACUACG-UGAAGUCGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GUCGCGGUG-AAU-ACGUU-CUCGGGUCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUGGGUUUUACCA-GAAG-UAGU-UAG-C-CU-AA-CC----------------------------------GCA-A--------------------------------------GGAGG-G-CGAUUA-CCACGGUAGGAUUCA-UG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAUCGGAAGGUG-CGGC-UGGAUCACCUCCUUUAAGAGCAUAUGA----------------------------------------------------------------------------
+>BaiMetha Bacillus methanolicus
+---------------------------------UUUUUGGAGAGUUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-CUAAUACAU-GCAAGU-CGA-ACGG-AC---UGA----------------------------------------------UGGGAG----------------------------------CUUG----------------------------------CUCCCU-------------------------------------------------GAA--GU--CAG-CGG-C-GG--A-CGGGUGAGU---AAC-ACGUGGG-CAA--CCU-GC-CUGUAAGA-CC--GGGAU-AA-CUUCG-G-GAAA-CCG-GAG-CUAAUACC-G-GAU-AA---U-C-CUC-U--U-U---CCC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GGG----A--A--AG-AGCUGAAA--GA-U-GG-C----------------UUCG----------------GCUA-UC-A--C----------UU----------ACAG---AUG-G-GCCCGCGG-CGC--A------UU-A-G-CU-A-G---UUGGUG-AG-G-UAAC-GG-CUCACCAA-GGCG-ACG-AUGCGUAGCCGACCU-G-AG-------------A-GGGU-GAUC-GGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UAGGG-AAUCUUCCG--------------------CAAU-GGAC-GAAA-GUCUGACGGAGCAACGCCGCG-UGA-GC-GA-AGAA-GGCC--UU-CG-GG-UCGUAAA------------------------GCUCUGUU-GU-CAGG-GAA-G--A---AC-AAGU-ACCGUU-------C-----G-AA-UA----G---GG-CGGU-ACU-UU-GA-CGGU-A-C-CU--A-ACC---------AG-AAAGC-CAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GUGGCA-A-GCG-UUGUC-CGGAAUUAUUGGGCGUAAAGCGCGCG-CAG-G-CGGUUC-CUUAAG-UCUG-AUGUG-AAA-GC-CCACGG-CUC-AA-CCGUGG-AGG-G-------------------------------------------UC-A-U----------------------------------------------UGGA-AAC-UGGGG-AAC-U-U-G-AG-UG-----CAGAAG-AGGAG-AGC-GGAAUU-CCA--------------------CGU-GUA-GCG-GUGAAA-UG-C-GUAGAG-AUGUGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGG--CUCUCUG------GUCUG--------------------------------------------------------------UAA-CU--GACG-----CUGA-GG--CGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AGUG-CUAAGUG-UUAGAGGG--U---UUCC---------------------------------GC-CCUUUAG-UGCU-GCA-GCUAACGCAU-UAA-GCAC-UCCGCCUG-GGGAGUACGGCC-GCAA-GGCU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCAGGUC-UUGACA-UC--------------CUCUG------A-CA-A-U-CCUG-GAGA-C-AG-G-ACGU---------UC-----------------------------------------UUCG----------------------------------------------------------------GG---GGA---CA-GAG-U-GA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-AC--CUUAG---U-U-GC-C-AG-CA--U--------------------------------UCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AAG-GUGAC-U-GCCG-GU-G-A-CAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--AC-C-U-GGGCUACACACGUGCUACAAUGG-AUGGUA--C-AAA-GGGC-U-GC-G-A-G-ACCG-CG-AGGU-U-----------GA-G-CCAA-UCC-CA-A-AAAACCA-UUC-UCAGUUCGGA-UUGCAGGC-U-GCAACUC-GCCUGCA-UGAAGCCGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCACGAGA-GUUUGUAACACCC-GAAG-UCGG-UGA-G-GU-AA-CC----------------------------------GUA-A--------------------------------------GGAGC-C-AGCCGC-CUAAGGUGGGACAGA-UG-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAUCGGAAGGUG-CGGC-UGGAUCACCUCCUUUCU--------------------------------------------------------------------------------------
+>CloThe10 Clostridium thermoautotrophicum
+-------------------------------------------GUUU-GAU-CCUGGCUCAGGACAAAC-GC-UGGC-GGC-G-UG--C-CUAACACAU-GCAAGU-CGA-GCGG-UC---UUU--------AAUUGG-------------------------------GGAAAUC----------------------------------UUCG----------------------------------GAUGGAACCGAUU------------------------------------------AAA--GA--UAC-CGC-C-GG--A-CGGGUGAGU---AAC-GCGUGGG-UAA--UCU-AC-CCUUCAGA-CU--GGGAU-AA-CACCG-G-GAAA-CUG-GUG-CUAAUACC-G-GAU-AC---G-G-UCU-A--C-GG--GAG---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------CUU--C-U--G--UA-GAA-GAAA--GG-U-GG-C----------------GCAA----------------GCUA-CC-G--C----------UG----------AAGG---AUG-A-GCCCGCGU-CCC--A------UU-A-G-CU-A-G---UUGGUG-AG-G-UAAU-GG-CUCACCAA-GGCG-ACG-AUGGGUAGCCGGCCU-G-AG-------------A-GGGU-GGUC-GGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUCUUGCG--------------------CAAU-GGGC-GAAA-GCCUGACGCAGCAACCCCGCG-UGA-GC-GA-UGAA-GGCC--UU-CG-GG-UUGUAAA------------------------GCUCUGUC-AU-CAGG-GAC-G--A---AG-UCUU-AAAGGC-------G-------AA-U-----A---GC-CUUU-AAG-GU-GA-CGGU-A-C-CU--G-AGG---------AG-GAAGC-CCC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAA-AC-GUAG-GGGGCG-A-GCG-UUGUC-CGGAAUUACUGGGCGUAAAGGGCGUG-UAG-G-CGGCCU-GGCAAG-UCAG-AUGUG-AAA-AA-CCCCGG-CUU-AA-CCGGGG-GCA-U-------------------------------------------GC-A-U----------------------------------------------UUGA-AAC-UGCCG-GGC-U-U-G-AG-GG-----CAGGAG-AGGAG-AGU-GGAAUU-CCC--------------------GGU-GUA-GCG-GUGAAA-UG-C-GUAGAU-AUCGGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGA--CUCUCUG------GCCUG--------------------------------------------------------------GCC-CU--GACG-----CUGA-GG--CGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-GGUA-CUAGGUG-UAGGAGG-----UAUCGA-CC---------------------------------CCUUGUG-UGCC-GCA-GUAAACACAA-UAA-GUAC-CCCGCCUG-GGGAGUACGGCC-GCAA-GGCU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-ACGCAACG-CGAAG-AA-CCUUA-CCGGGGU-UUGACA-UC--------------CUGCG------A-AC-C-U-GGUG-GAAA-C-AC-U-GGGG--UG-----CC-----------------------------------------UUCG----------------------------------------------------------------GG---GAA---CG-CAG-A-GA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CCUA-CC--UUUAG---U-U-GC-C-AG-CG--G-------------------------------GUAAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGGG-CACU-C-U-AAA-GGGAC-U-GCCG-GU-G-A-CAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUA--UC-C-C-GGGCUACACACGUGCUACAAUGG-CCUGUA--C-AAA-GGGG-U-GC-G-A-A-GGAG-CG-AUCC-G-----------GA-G-CGAA-UCC-CA-A-AAAGCAG-GUC-UCAGUUCGGA-UUGCAGGC-U-GCAACUC-GCCUGCA-UGAAGUCGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCACGAAA-GCUGGCAACACCC-GAAG-CCGG-UGA-C-CU-AA-CCC---------------------------------GCG-A--------------------------------------GGAAG-G-AGCCGU-CUAAGGUGGGGCUGG-UG-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAUCGGAAGGUG-CGGC-UGGAUCACCUCC-------------------------------------------------------------------------------------------
+>FusNecro Fusobacterium necrophorum
+----------------------------------------AAGGUUU-GAU-CAUGGCUCA-GAUGAAC-GC-UGAC-AGA-A-UGG-C-UUAACACAU-GCAAGU-CG--ACUC-GA---GUC--------------------------------------------------------------------------------------UUC------------------------------------------------------------------------------------------GAC--UU--GGG-UGG-A-GC--A-CGGGUGAGU---AAC-GCGUAAA-GAA--CUU-GC-CUCUUAGA-CC--GGGAC-AA-CAUCU-G-GAAA-CGG-AUG-CUAAUACC-G-GAU-AU---U-A-UGG-U--U-UU--UUC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GGA--G-G--A--AU-CAU-GAAA--GC-U---------------------AGA--------------------U-GC-G--C----------UA----------AGAG---AGA-G-CUUUGCGU-CCC--A------UU-A-G-CU-A-G---UUGGUG-AG-G-UAAC-GG-CCCACCAA-GGCA-AUG-AUGGGUAGCCGGCCU-G-AG-------------A-GGGU-GAAC-GGCCACAAGGGGA-CUGA-GA-CACG-GCCCUUA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGACCACAA-GUCUGAUCCAGCAAUUCUGUG-UGC-AC-GA-UGAC-GUUU--UU-CG-GA-AUGUAAA------------------------GUGCUUUC-AG-UCGG-GAA-G--A---A--------------------------G-UC-AG---------------------U-GA-CGGU-A-C-CG--A-CAG---------AA-GAAGC-GAC-GGCUAAA-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAU-GUCGCA-A-GCG-UUAUC-CGGAUUUAUUGGGCGUAAAGCACGUC-UAG-G-CGGCAA-GGAAAG-UCUG-AUGUG-AAA-AU-GCGGAG-CUUCAA-CUCCGU-AU--G-------------------------------------------GC-G-U----------------------------------------------UGGA-AAC-UGCCU-UAC-U-A-G-AG-UA-----CUGGAG-AGGUA-GGC-GGAACU-ACA--------------------AGU-GUA-GAG-GUGAAA-UU-C-GUAGAU-AUUUGUAGG-AAU-G-CCGA--U-G-GGGAAGCCAG--CCUACUG------GACAG--------------------------------------------------------------AUA-CU--GACG-----CUAA-AG--CGCGAAA-G-C-GUGGG-UAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCUGUAAACGAUG-AUUA-CUAGGUG-UUGGGGG-------UCAAA-----------------------------------CCUCAAGCCGCC-CAA-GCUAACGCGA-UAA-GUAA-UCCGCCUGGG--AGUACGUAC-GCAA-GUAU-GAA-ACUC-AAA-GGAAUUG-ACGGGGACC----GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-ACGCAACG-CGAGG-AA-CCUUA-CCAGCGU-UUGACA-UC--------------CUACG------A-AC-G-G-AGCA-GAGA-U-GC-G-CCGG--UGCC---CU-----------------------------------------UUCG----------------------------------------------------------------GG--GGAA---CG-UAG-U-GA--------------------------------------------------CAGGU-GGUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUA--GU--CCGCAAC-GAGCGCAACC-CCUA-UC--GUAUG---U-U-AC-C-AU-CC--U--------------------------------UCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-GACU-C-A-UGG-GAUAC-U-GCCU-GC-U-A-CGA-GCA----GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCAUCAU-G-CC-CCUUAUA--CG-C-U-GGGCUACACACGUGCUACAAUGG-GUAGUA--C-AGA-GAGC-A-GC-A-A-A-CCCG-CG-AGGG-G-----------GA-G-CAAA-UCU-CA-G-AAAACUA-UUC-UUAGUUCGGA-UUGUACUC-U-GCAACUC-GAGUACA-UGAAGUUGGAAU-CGCUAGUA-AUCGC-AAA-UC-AGCAAU-GUUGCGGUG-AAU-ACGUU-CUCGGGUCUUGUA----CACACCGCCCGUC-ACA--CCACGAGA-GUUGGUUGCACCU-GAAG-UAGC-AGG-C-CU-AA-CC----------------------------------UUA-G--------------------------------------GGAAG-G-AUGCUC-CGAGGGUGUGGUUAG-CG-AUU-GGGGUG-AAGUCGUAACAAGGUAUCCGUACGGGAACGUGUCGUGCUGGAUCACCUCCUU-----------------------------------------------------------------------------------------
+>MetTherm Methanobacterium thermoautotrophicum
+-------------------------------------AAGUCCGUUU-GAU-CCUGGCGGAGGCU-ACU-GC-UAUU-GGG-GUUC--GAUUAAGCCAU-GCAAGU-CGA-ACGA-AC--------------------------------------------------------------------------------------------CUUGU---------------------------------------------------------------------------------------------GU--UCG-UGG-C-GA--A-CGGCUCAGU---AAC-ACGUGGA-UAA--CCU-GC-CCUUGGGA-CU--GGGAU-AA-CCCCG-G-GAAA-CUG-GGG-AUAAACCU-G-GAU-A------G-GUG-A--U-GC-GGCC--------------------------------------------------------------------------------------------UG-GAAU-----------------------------------------------------------------------------------GGU--G-C--U--UC-ACC-GAAA-CAC-C---------------------UUCGG------------------G-GU-G--C----------CC----------AAGG---AUG-G-GUCUGCGG-CCG--A------UU-A-G-GU-A-G---UUGGUA-GG-G-UAAC-GG-CCUACCAA-GCCC-AUC-AUCGGUACGGGUUGU-G-AG-------------A-GCAA-GAGC-CCGGAGAUGGAAC-CUGA-GA-CAAG-GUUCCAG-GCC-C-UACG--GGGC-GC-A-GC-A-G-GCGCG-AAACCUCCG--------------------CAAU-GCAC-GCAA-GUGCGACGGGGGAACCCCAAG-UGC-CA-C-----U-CU----UA-AC----GGG--G-------------------------UGGCUUUU-CA-GAAG-U-------------------------------G-----U-AA-AA----A--------------------------G-C-UU--C-UGG---------AA-UAAGG-GCUGGGCAAGA-CCGGU---GCCAGCCGCCG-CGGUAAC-AC-CGG-CAGCUCA-A-GUG-GUAGC-CGCUUUUAUUGGGCCUAAAGCGUCCG-UAG-C-CGGUCU-GAUAAG-UCUC-UGGUG-AAA-UC-CCGCAG-CUU-AA-CUGUGG-GAAUU-------------------------------------------GC-U-G----------------------------------------------GAGA-UAC-UAUCAUGAC-U-C-G-AG-GU-----CGGGAG-AGGCU-GGA-GGUACU-CCC--------------------AGG-GUA-GGG-GUGAAA-UC-C-UGUAAU-CCUGGGAGG-ACC-A-CCUG--U-G-GCGAAGGCGU--CCAGCUG------GAACG--------------------------------------------------------------AAC-CU--GACGG-----UGA-GG--GACGAAA-G-C-UAGGG-GCGC-GAACCGG-AUUAGAUAC-----CCGGGUAG-UCCUG-GCCGUAAACGAUG-UGGA-CUUGGUG-UUGGGAUG--GC-UUCGA--------------------------------GCU-GCCCCAG-UGCC-GAA-GGGAAGCUGU-UAA-GUCC-ACCGCCUG-GGAAGUACGGCC-GCAA-GGCU-GAA-ACUU-AAA-GGAAUUG-GCGGGGG-AGC--ACCA--CA-A-CGC-GUGGAG-CC-UGCGGU-UUAAUUG-G-AUUCAACG-CCGGA-CA-UCUCA-CCAGGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACAGC-AGUAUGAUGGCCAGGUUGAUGACCUUGCC-UGA-CGAGCUGAGAGGA-GGUGCAUGGCCGCCGUCA-GCUCGUACC-GUGA-GGCGU-CCUG-UUAA-GU-CAGGCAAC-GAGCGAGACC-CACG-CC--CUUAG---U-U-AC-C-AG-CG--G--GACCC-------------------------UUUG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGU---UGCCGGG-CACA-C-U-AAG-GGGAC-C-GCCA-GU-G-A-UAA-ACU-G--GAGG-A-AGG-A-GUGG-ACGACGGU--AGGUCCGUAU-G-CC-CCGAAUC--CC-C-U-GGGCAACACGCGGGCUACAAUGG-CCUGGA--C-AAU-GGGU-U-CC-G-A-C-ACUG-AA-AGGU-G-----------GA-G-GUAA-UCC-CC-U-AAACCAG-GUC-GUAGUUCGGA-UCGAGGGC-U-GUAACUC-GCCCUCG-UGAAGCUGGAAU-GCGUAGUA-AUCGC-GUG-UC-AU-UAU-CGCGCGGUG-AAU-ACGUC-CCUGCUCCUUGCA----CACACCGCCCGUC-ACG--CCACCCAA-AAAGGGCUUGGAU-GA-G-GCCA-C-A-G-UA----------------------------------------UUU-------------------------------------------UG-C-UGUGGU-CGAAUCUGGGUUCUU-UG-AGG-AGGGCG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCCU------------------------------------------------------------------------------------------
+>CloTeta4 Clostridium tetani
+---------------------------------------GAGAGUUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-UUAACACAU-GCAAGU-CGA-GCGA-UG---AAG-----------------------------------------------CUUCC----------------------------------UUCG----------------------------------GGAAG--------------------------------------------------UGG--AU--UAG-CGG-C-GG--A-CGGGUGAGU---AACACAGUGGG-CAA--CCU-GC-CUCAAAGA-GG--GGAAU-AG-CCCUC-C-GAAA-GGA-GGA-UUAAUACC-G-CAU-AA---A-G-UUA-A--G-GU--UUC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GAA--A-C--U--UU-AAC-CAAA--GG-A---------------------GUAA-------------------U-CU-G--C----------UU----------UGAG---AUG-G-GCCCGCGC-CCC--A------UU-A-G-CU-A-U---UUGGUA-AG-G-UAAU-GG-CUUACCAA-GGCG-ACG-UAGGGUAGCCGACCU-G-AG-------------A-GGGU-GAUC-GGCCACAUUGGAA-CUGA-GA-CACG-GUCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCG--------------------CAAU-GGGG-GAAA-CCCUGACGCAGCAACGCCGCG-UGG-GU-GA-UGAA-GGUU--UU-CG-GA-UCGUAAA------------------------ACCCUGUU-UU-CUGG-GAC-G------A--------------------------U-AA------------------------U-GA-CGGU-A-C-CA--G-AGG---------AG-GAAGC-CAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GUGGCA-A-GCG-UUGUC-CGGAUUUACUGGGCGUAAAGGGUGCG-UAG-G-CGGAUG-CUUAAG-UGAG-AUGUG-AAA-UA-CCUAAG-CUU-AA-CUUAGG-GGC-U-------------------------------------------GC-A-U----------------------------------------------UUCA-AAC-UGGGC-AUC-U-A-G-AG-UA-----CAGGAG-AGGGA-AAC-GGAAUU-CCU--------------------AGU-GUA-GCG-GUGAAA-UG-C-GUAGAGGAUUAGGAAG-AAC-A-CCAG--U-G-GCGAAGGCGG--UUUCCUG------GACUG--------------------------------------------------------------UAA-CU--GACG-----CAGA-GG--CACGAAA-G-C-GUGGG-UAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AAUA-CUAGGUG-UAGGAGGG------UCCA----------------------------------A-CCUUCUG-UGCC-GCA-GUUAACACAU-UAA-GUAU-UCCGCCUG-GGGAGUACGGUC-GCAA-GACU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCA-GCGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCUAGAC-UUGACCAUC--------------CUUCU------G-AC-C-U-CUCU-UAAC-U-GA-G-GAAG--UC-----CC-----------------------------------------UUCG----------------------------------------------------------------GG----GA---CA-GGG-A-UA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUA-UU--AUUAG---U-U-GC-U-AC-CA--U--------------------------------UAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGAG-CACU-C-U-AAU-GAGAC-U-GCCU-GG-G-U-GAA-CCA-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUGC-UC-U-A-GGGCUACACACGUGCUACAAUGG-UCGGUA--C-AGA-GAGA-C-GC-A-A-G-ACCG-CG-AGGU-G-----------GA-G-CAAA-UCU-CA---AAAACCG-AUC-CCAGUUCGGA-UUGCAGGC-U-GAAACUC-GCCUGCA-UGAAGCCGGAGU-UGCUAGUA-AUCGC-AAA-UC-AG-AAU-GUUGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGAGA-GUUGGCAACACCC-GAAG-UCCG-UGA-G-GU-AA-CC----------------------------------GUA-A--------------------------------------GGAGC-C-AGCGGC-CGAAGGUGGGGUUAA-UG-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGAGAACCUG-CGGC-UGGAUCACCUCC-------------------------------------------------------------------------------------------
+>SulShiba Sulfolobus shibatae
+--------------------------------------AAUCCGGUU-GAU-CCUGCCGGACCCG-ACC-GC-UAUC-GGG-GUGG--GGCUAAGCCAU-GGGAGU-CGU-ACGC-UC-------------------------------------------------------CCG----------------------------------GGCA----------------------------------AGG---------------------------------------------------------GA--GCG-UGG-C-GG--A-CGGCUGAGU---AAC-ACGUGGC-UAA--CCU-AC-CCUGAGGA-GG--GAGAU-AA-CCCCG-G-GAAA-CUG-GGG-AUAAUCUC-C-CAU-A------G-GCG-A--G-GA--GUC-------------------------------------------------------------------------------------------CUG-GAAC-----------------------------------------------------------------------------------GGU--U-C--C--UC-GCU-GAAA-GGU-U-CA-U----G-GGC-----UAUUUCCC-----GC--UC---AUGA-GC-G--C----------CU----------CAGG---AUG-G-GGCUGCGG-CCC--A------UC-A-G-GU-A-G---UUGGGG-GG-G-UAAG-GG-CCCCCCAA-GCCU-AUA-ACGGGUAGGGGCCGU-G-AG-------------A-GCGG-GAGC-CCCCAGUUGGGCA-CUGA-GA-CAAG-GGCCCAG-GCC---UACG--GGGC-GC-A-CC-A-G-GCGCG-AAACGUCCC--------------------CAAU-GCGC-GGAA-GCGUGAGGGCGCCACCCCGAG-UGC-UC-C-----C-------GU-AA------G--G-------------------------GAGCUUUU-CC-CCGC-U-------------------------------C-----U-AC-AA----A--------------------------G-G-CG--G-GGG---------AA-UAAGC-GGGGGGCAAGU-CUGGU---GUCAGCCGCCG-CGGUAAU-AC-CAG-CCCCGCG-A-GUG-GUCGG-GACUCUUACUGGGCCUAAAGCGCCCG-UAG-C-CGGCCC-GACAAG-UCAC-UCCUU-AAA-GA-CCUCGG-CUC-AA-CCGGGG-GAA-U-------------------------------------------GG-G-G----------------------------------------------GUGA-UAC-UGUCG-GGC-U-A-G-GG-GG-----CGGGAG-AGGCC-AGC-GGUACU-CCC--------------------GGA-GUA-GGG-GCGAAA-UC-C-UCAGAU-CUCGGGAGG-ACC-A-CCAG--U-G-GCGAAAGCGG--CUGGCUA------GAACG--------------------------------------------------------------CGC-CC--GACGG-----UGA-GG--GGCGAAA-G-C-CGGGG-CAGC-AAAAGGG-AUUAGAUAC-----CCCUGUAG-UCCCG-GCUGUAAACGAUG-CAGG-CUAGGUG-UCACAUGG--GC-UUAGA--------------------------------GCC-CAUGUGG-UGCC-GCA-GGGAAGCCGU-UAA-GCCU-GCCGCCUG-GGGAGUACGGUC-GCAA-GACU-GAA-ACUU-AAA-GGAAUUG-GCGGGGG-AGC--ACCA--CA-A-GGG-GUGGAA-CC-UGCGGC-UCAAUUG-G-AGUCAACG-CCUGG-AA-UCUUA-CUAGGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACCGC-AGGAUGACGGCCAGGCUAACGACCUUGCC-UGA-CUCGCGGAGAGGA-GGUGCAUGGCCGUCGCCA-GCUCGUGUU-GUGA-AAUGU-CCUG-UUAA-GU-CAGGCAAC-GAGCGAGACC-CCCA-CC--AUUAG---U-U-GG-U-AU-CC--U--GGUC--------------------------UCCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGC---C-GGGAC-CACA-C-U-AGU-GGGAC-U-GCCG-GC-G---UAA-GCC-G--GAGG-A-AGG-A-GGGG-GCCACGGC--AGGUCAGCAU-G-CC-CCGAAAC--CC-C-U-GGGCCGCACGCGGGUUACAAUGG-CAGGGA--C-AGC-GGGA-UUCC-G-A-C-CCCG-AA-AGGG-G-----------AA-G-GUAA-UCC-CU-U-AAACCCU-GCC-GCAGUUGGGA-UCGAGGGC-U-GAAACUC-GCCCUCG-UGAACGAGGAAU-CCCUAGUA-ACCGC-AGA-UC-AAC-AA-UCUGCGGUG-AAU-ACGUC-CCUGCUCCUUGCA----CACACCGCCCGUC-GCU--CCACCCGA-GUAGGAGAGGGGU-GA-G-GCCC-C-U-U-GC----C-----------------------------------UUU-A---------------------------------------G-GU-G-GGGGGU-CGAGCUUCUCUCCUG-CA-AGG-GGGGAG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCA-------------------------------------------------------------------------------------------
+>CloBifer Clostridium bifermentans
+---------------------------------------GAGAGUUU-GAU-CCUGGCUCAGGAUGAAC-GC-UGGC-GGC-G-UG--C-CUAACACAU-GCAAGU-CGA-GCGA-UC--------------------------------------------------------UC----------------------------------UUCG----------------------------------GA----------------------------------------------------------GA--GAG-CGG-C-GG--A-CGGGUGAGU---AAC-GCGUGGG-UAA--CCU-GC-CCUGUACA-CA--CGGAU-AA-CUAAC-C-GAAA-GGU-AUA-CUAAUACG-G-GAU-AA---C-A-UAU-G--A-AA--GUC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GGC--U-U--U--UGAUAU-CAAA--GC-----------------------UCCG---------------------GC-G--G----------UA----------CAGG---AUG-G-ACCCGC---GUG--A------UU-A-G-CU-A-G---UUGGUA-AG-G-UAAU-GG-CUUACCAA-GGCA-ACG-AUCAGUAGCCGACCU-G-AG-------------A-GGGU-GAUC-GGCCACACUGGAA-CUGA-GA-CACG-GUCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCA--------------------CAAU-GGGC-GAAA-GCCUGAUGCAGCAACGCCGCG-UGA-GC-GA-UGAA-GGCC--UU-CG-GG-UCGUAAA------------------------GCUCUGUC-CU-CAAG-GAA-G------A--------------------------U-AA------------------------U-GA-CGGU-A-C-UU--G-AGG---------AG-GAAGC-CCC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GGGGCU-A-GCG-UUAUC-CGGAAUUACUGGGCGUAAAGGGUGCG-UAG-G-UGGUUU-UUUAAG-UCAG-AAGUG-AAA-GG-CUACGG-CUC-AA-CCGUAG-UA--A-------------------------------------------GC-U-U----------------------------------------------UUCA-AAC-UAGAG-AAC-U-U-G-AG-UG-----CAGGAG-AGGAG-AGU-AGAAUU-CCU--------------------AGU-GUA-GCG-GUGAAA-UG-C-GUAGAU-AUUAGGAGG-AAU-A-CCAG--U-A-GCGAAGGCGG--CUCUCUG------GACUG--------------------------------------------------------------UAA-CU--GACA-----CUGA-GG--CACGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AGUA-CUAGGUG-UCGGGG-------UUACC-CC----------------------------------CCUCGG-UGCC-GCA-GCUAACGCAU-UAA-GUAC-UCCGCCUG-GGAAGUACGAUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGA-CCC--GC-A--CA-A-GUA-GCGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCUAAGC-UUGACA-UC-------------CCACUG------A-CC-U-C-UCCC-UAAU-C-GG-A-GAUU--U------CC-----------------------------------------UUCG----------------------------------------------------------------GG----GA---CA-GUGGU-GA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-CC--UUUAG---U-U-GC-C-AG-CA--U--------------------------------UAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AGA-GGGAC-U-GCCG-AG-G-A-UAA-CUC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--CU-U-A-GGGCUACACACGUGCUACAAUGG-GUGGUA--C-AGA-GGGU-U-GC-C-A-A-GCCG-CG-AGGU-G-----------GA-G-CUAA-UCC-CU-U-AAAGCCA-UUC-UCAGUUCGGA-UUGUAGGC-U-GAAACUC-GCCUACA-UGAAGCUGGAGU-UACUAGUA-AUCGC-AGA-UC-AG-AAU-GCUGCGGUG-AAU-GCGUU-CCCGGGUCUUGUA----CACACCGCCCGUC-ACA--CCAUGGAA-GUUGGGGGCGCCC-GAAG-CCGG-UUA-G-CU-AA-CCU---------------------------------UUU---------------------------------------AGGAAG-C-GGCCGU-CGAAGGUGAAACCAA-UG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAUCGGAAGGUG-CGGC-UGGAUCACCUCCUU-----------------------------------------------------------------------------------------
+>MexSoehn Methanothrix soehngenii
+-------------GGAAUUAACAAAAACUUCCUAGAGAAUUCUGGUU-GAU-CCUGCCAGAGGUU-ACU-GC-UAUC-GAG-GUUC--GACUAAGCCAU-GCGAGU-CGA-AUGU-A---------------------------------------------------------------------------------------------GCAA-----------------------------------------------------------------------------------------------U--ACA-UGG-C-GA--A-CUGCUCAGU---AAC-ACGUGGA-CAA--CCU-GC-CCUUAGGU-UG--GGUAU-AA-ACCCG-G-GAAA-CUG-GGU-AUAAUACC-C-GAU-A------G-GUC-U--C-GA-UUGC--------------------------------------------------------------------------------------------UG-GAAU-----------------------------------------------------------------------------------GCA--U-C--G--AG-AUU-UAAA--GC-----------------------UCCG---------------------GC-G--C----------CU----------AAGG---AUG-G-GUCUGCGG-CCU--A------UC-A-G-GU-A-G---UAGUGG-GU-G-UAGC-GU-ACCUACUA-GCCU-ACG-ACGGGUACGGGUUGU-G-AG-------------A-GCAA-GAGC-CCGGAGAUGGAUU-CUGA-GA-CACG-AAUCCAG-GCC-C-UACG--GGGU-GC-A-GC-A-G-GCGCG-AAAACUUUA--------------------CAAU-GCUG-GCAA-CAGCGAUAAGGGAACCUCGAG-UGC-CA-G-----G-UU----AC-A-----AAU--C-------------------------UGGCUGUC-GA-GAUG-C-------------------------------C-----U-AA-AA----A--------------------------G-C-AU--U-UCA-------U-AG-CAAGG-GCCGGGCAAGA-CCGGU---GCCAGCCGCCG-CGGUAAC-AC-CGG-CGGCUCG-A-GUG-GUAAC-CGUUAUUAUUGGGUCUAAAGGGUCUG-UAG-C-CGGCCG-GAUAAG-UCUC-UUGAG-AAA-UC-UGGCAG-CUU-AA-CUGUCA-GGCUU-------------------------------------------UC-A-G----------------------------------------------GAGA-UAC-UGUCU-GGC-U-C-G-AG-GC-----CGGGAG-AGGUG-AGA-GGUACU-UCA--------------------GGG-GUA-GGG-GUGAAA-UC-U-UGUAAU-CCUUGAAGG-ACC-A-CCAG--U-G-GCGAAGGCGU--CUCACCA------GAACG--------------------------------------------------------------GAC-CU--GACGG-----CAA-GG--GACGAAA-G-C-UAGGG-GCAC-GAACCGG-AUUAGAUAC-----CCGGGUAG-UCCUA-GCCGUAAACGAUA-CUCG-CUAGGUG-UCGGCCAC--GG-UGCGA--------------------------------CCG-UUGUCGG-UGCC-GUA-GGGAAGCCGU-GAA-GCGA-GCCACCUG-GGAAGUACGGCC-GCAA-GGCU-GAA-ACUU-AAA-GGAAUUG-GCGGGGG-AGC--ACCA--CA-A-CGG-GUGGAG-CU-UGCGGU-UUAAUUG-G-AUUCAACG-CCGGA-AA-UCUUA-CCGGGAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACAGC-AAUAUGAAGGCCAGGCUGAAGACUUUGCC-GGA-UUAGCUGAGAGGU-GGUGCAUGGCCGUCGUCA-GUUCGUACU-GUGA-AGCAU-CCUG-UUAA-GU-CAGGCAAC-GAGCGAGACC-CACG-CC--CACAG---U-U-GC-C-AG-CG--U--ACUC--------------------------UCUG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAG---UGACGGG-UACA-C-U-GUG-GGGAC-C-GCCG-CU-G-C-UAA-AGC-G--GAGG-A-AGG-A-AUGG-GCAACGGU--AGGUCAGUAU-G-CC-CCGAAUA--UC-C-C-GGGCUACACGCGAGCUACAAUGG-UUGGUA--C-AAU-GGGU-A-UC-U-A-C-CCCG-AA-AGGG-G-----------AC-G-GGAA-UCU-CC-U-AAAACCA-AUC-UUAGUUCGGA-UUGAGGGC-U-GCAACUC-GCCCUCA-UGAAGCUGGAAU-CCGUAGUA-AUCGC-GUU-UC-AAC-AG-AACGCGGUG-AAU-ACGUC-CCUGCUCCUUGCA----CACACCGCCCGUC-AAA--CCACCCGA-GUAGGGUCUGAAU-GA-G-AGCG-C-U-U-U-----------------------------------------CUU-U------------------------------------------GGA-GGCGUU-CGAAUUUGGGCUUUG-CA-AGG-GGGGUU-AAGUCGUAACAAGGUAGCCGUAGGGGAAUCUG-CGGC-UGGAUCACCUCCUAACGUUACGAGCAUGCAAAACAGC------------------------------------------------------------------
+>CaeCaryo Caedibacter caryophila
+----------------------------------------AGAGUUU-GAU-NNUGGCUCAGAACGAAC-GC-UGGC-GGC-A-CG--C-CUAACACAU-GCAAGU-CGA-ACGA-GG---GCA------------------------------------------------UUCU----------------------------------UUCG----------------------------------GGGA-------------------------------------------------U-GUU--CC--UAG-UGG-C-GG--A-CGGGUGAGU---AAC-GCGUGGG-A-A--UCU-GC-CUGAUAGU-GG--GGGAU-AA-CUGUU-G-GAAA-CGA-CAG-CUAAUACC-G-CAU-AC---G-C-UGG-AGAG-UAGAAAAGAGAAGCAGGAAAGGAAAGGUACCGAGGGAAAUCUUUUGGUAUUUCUGUUUUCUGAUUGGGUGAAGGAAAGGGCCUUGAAAACCUUUUCGUUUUCCUCAAGAGAGAAGUUGGGAAAGGGUGUCAAUUCUUUCCGGAUUUCUUCUGGGGGAGAGGUUUUGAAAACCUUUCUGCAUUGUUUCUUUUUUCU-C--CUCUC-CAG-GAAA--GA-----------------------UUUA---------------------UC-G--C----------UA----------UCAG---AUG-A-GCCCGCGU-CAG--A------UU-A-G-GU-A-G---UUGGUG-AG-G-UAAA-GG-CUCACCAA-GCCA-AUG-AUCUGUAGCUGGUCU-G-AG-------------A-GGAU-GACC-AGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGGG-GCAA-CCCUGAUCCAGCGAUGCCGCG-UGA-AU-GA-AGAA-GGCC--UU-AG-GG-UUGUAAA------------------------GUUCUUUC-AC-CCGU-GAC-G------A--------------------------U-AA------------------------U-GA-CGGU-A-G-CG--G-GAG---------AA-GAAGC-CCC-GGCUAAC-UCCGU---GCCAGCAGCCG-CGGUAAG-AC-GGAG-GGGGCU-A-GCG-UUGUU-CGGAAUGACUGGGCGUAAAGGGCGUG-UAG-G-CUGUUG-AUCAAG-UCAA-GCGUG-AAA-GC-CUCGGG-CUU-AA-CCCGAG-AAC-U-------------------------------------------GC-G-U----------------------------------------------UUGA-UAC-UGGUU-GAC-U-U-G-AG-GA-----CGAGAG-AGGAA-AGU-GGAAUU-CCG--------------------AGU-GUA-GAG-GUGAAA-UU-C-GUAGAU-AUUCGGAGG-AAC-A-UCAG--A-G-GCGAAGGCGG--CUUUCUG------GCUCG--------------------------------------------------------------UAU-CU--GACG-----CUGA-GG--CGCGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCUGUAAACGAUG-AGUG-CUAGACG-UUGGGGGG-------UUC----------------------------------C-CCUUCAG-UGUC-GCA-GCUAACGCAU-UAA-GCAC-UCCGCCUG-GGGAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGCAG-AA-CCUUA-CCAGCUC-UUGACA-UG--------------GGGAU----U-A-UG-G-AGAGGA-GAGA-U-UC-UUUCCU--UC-----AG-----------------------------------------UUCGG---------------------------------------------------------------CU----GG---AU-CCC-G-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUCA-UU--UUUAG---U-U-GC-C-AU-CA--G-------------------------------GUUUGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CUGGG-UACU-C-U-AAA-GAAAC-U-GCCG-GU-G-A-UAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUAUG--GG-C-U-GGGCUACACACGUGCUACAAUGG-CGGUGA--C-AGA-GAGG-A-GC-A-A-A-GGGG-CG-ACCU-G-----------GA-G-CGAA-UCU-UU---AAAAGCC-GUC-UCAGUUCGGA-UUGCACUC-U-GCAACUC-GAGUGCA-UGAAGUUGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CACGGGCCUUGUA----CACACCGCCCGUC-AUA--CCAUGGGA-GUUGAUUCAACCU-UAAG-GCGG-UGA-G-CU-AA-CC----------------------------------GAA-A--------------------------------------GGGAG-C-AGCCGA-CCACGGUGGGGUCAA-UG-ACU-GGGGUA-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCUCCUUUNN--------------------------------------------------------------------------------------
+>BaiSubti Bacillus subtilis
+--------------------------------UUUAUCGGAGAGUUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-CUAAUACAU-GCAAGU-CGA-GCGG-AC---AGG----------------------------------------------UGGGAG----------------------------------CUUG----------------------------------CUCC---------------------------------------------------GAU--GU--UAG-CGG-C-GG--A-CGGGUGAGU---AAC-ACGUGGG-UAA--CCU-GC-CUGUAAGA-CU--GGGAU-AA-CUCCG-G-GAAA-CCG-GGG-CUAAUACC-G-GAU-GG---U-U-GUU-U--G-A---ACC---------------------------------------------------------------------------------------------G-CAU------------------------------------------------------------------------------------GGU----U--C--AA-ACAUAAAA--GG-U-GG-C----------------UUCG----------------GCUA-CC-A--C----------UU----------ACAG---AUG-G-ACCCGCGG-CGC--A------UU-A-G-CU-A-G---UUGGUG-AG-G-UAAC-GG-CUCACCAA-GGCA-ACG-AUGCGUAGCCGACCU-G-AG-------------A-GGGU-GAUC-GGCCACACUGGGA-CUGA-GA-CACG-GCCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UAGGG-AAUCUUCCG--------------------CAAU-GGAC-GAAA-GUCUGACGGAGCAACGCCGCG-UGA-GU-GA-UGAA-GGUU--UU-CG-GA-UCGUAAA------------------------GCUCUGUU-GU-UAGG-GAA-G--A---AC-AAGU-ACCGUU-------C-----G-AA-CA----G---GG-CGGU-ACC-UU-GA-CGGU-A-C-CU--A-ACC---------AG-AAAGC-CAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GUGGCA-A-GCG-UUUUC-CGGAAUUAUUGGGCGUAAAGGGCUCG-CAG-G-CGGUUU-CUUAAG-UCUG-AUGUG-AAA-GC-CCCCGG-CUC-AA-CCGGGG-AGG-G-------------------------------------------UC-A-U----------------------------------------------UGGA-AAC-UGGGG-AAC-U-U-G-AG-UG-----CAGAAG-AGGAG-AGU-GGAAUU-CCA--------------------CGUUGUA-GCG-GUGAAA-UG-C-GUAGAG-AUGUGGAGG-AAC-A-CCAG--U-G-GCGAAGGCGA--CUCUCUG------GUCUG--------------------------------------------------------------UAA-CU--GACG-----CUGA-GG--AGCGAAA-G-C-GUGGG-GAGC-GAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AGUG-CUAAGUG-UUAGGGGG--U---UUCC---------------------------------GC-CCCUUAG-UGCU-GCA-GCUAACGCAU-UGA-GCAC-UCCGCCUG-GGGAGUACGGUC-GCAA-GACU-GAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CUAGGUC-UUGACA-UC--------------CUCUG------A-CA-A-U-CCUA-GAGA-U-AG-G-ACGU--CC-----CC-----------------------------------------UUCG----------------------------------------------------------------GG----G----CA-GAG-U-GA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-AU--CUUAG---U-U-GC-C-AG-CA--U--------------------------------UCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGGG-CACU-C-U-AAG-GUGAC-U-GCCG-GU-G-A-CAA-ACC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--AC-U-U-GGGCUACACACGUGCUACAAUGG-ACAGAA--C-AAA-GGGC-A-GC-G-A-A--CCG-CG-AGGU-U-----------AA-G-CCAA-UCC-CA-C-AAAUCUG-UUC-UCAGUUCGGA-UCGCAGUC-U-GCAACUC-GACUGCG-UGAAGCUGGAAU-CGCUAGUA-AUCGC-GGA-UC-AG-CAU-GCCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCACGAGA-GUUUGUAACACCC-GAAG-UCGG-UGA-G-GU-AA-CCU---------------------------------UUU---------------------------------------AGGAGC-C-AGCCGC-CGAAGGUGGGACAGA-UG-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAUCGGAAGGUG-CGGC-UGGAUCACCUCCUUUCU--------------------------------------------------------------------------------------
+>CloGhoni Clostridium ghoni
+---------------------------------NNNNNNGAGAGUUU-GAU-CCUGGCUCAGGAUGAAC-GC-UGGC-GGC-G-UG--C-CUAACACAU-GCAAGU-CGA-GCGA-AU-------------------------------------------------------UCC----------------------------------UUCG----------------------------------GG----------------------------------------------------------AA--GAG-CGG-C-GG--A-CGGGUGAGU---AAC-GCGUGGG-UAA--CCU-GC-CCUGUACA-CA--CGGAU-AA-CAUAC-C-GAAA-GGU-AUG-CUAAUACG-G-GAU-AA---CUA-UAU-G--A-AA--GUU---------------------------------------------------------------------------------------------G-CAUA-----------------------------------------------------------------------------------AGC--U-U--U--CA-UAU-CAAA--GC-----------------------UUUU---------------------GC-G--G----------UA----------CAGG---AUG-G-ACCCGCGU-CUG--A------UU-A-G-CU-A-G---UUGGUA-AG-G-UAAC-GG-CUUACCAA-GGCA-ACG-AUCAGUAGCCGACCU-G-AG-------------A-GGGU-GAUC-GGCCACACUGGAA-CUGA-GA-CACG-GUCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCA--------------------CAAU-GGGC-GAAA-GCCUGAUGCAGCAACGCCGCG-UGA-GC-GA-UGAA-GGCC--UU-CG-GG-UCGUAAA------------------------GCUCUGUC-CU-CAAG-GAA-G------A--------------------------U-AA------------------------U-GA-CGGU-A-C-UU--G-AGG---------AG-GAAGC-CCC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GGGGCU-A-GCG-UUAUC-CGGAAUUACUGGGCGUAAAGGGUGCG-UAG-G-CGGUCU-UUCAAG-CCAG-AAGUG-AAA-GG-CUACGG-CUC-AA-CCGUAG-UA--A-------------------------------------------GC-U-U----------------------------------------------UUGG-AAC-UGUAG-GAC-U-U-G-AG-UG-----CAGGAG-AGGAG-AGU-GGAAUU-CCU--------------------AGU-GUA-GCG-GUGAAA-UG-C-GUAGAU-AUUAGGAGG-AAC-A-CCAG--U-A-GCGAAGGCG---CUCUCUG------GACUG--------------------------------------------------------------UAA-CU--GACG-----CUGA-GG--CACGAAA-G-C-GUGGG-GAGC-GAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AGUA-CUAGGUG-UCGGGGG------UUACC-C----------------------------------CCCUCGG-UGCC-GCA-GCUAACGCAU-UAA-GUAC-UCCGCCUG-GGAAGUACGCUC-GCAA-GAGU-GAA-ACUC-AAA-GGAAUUG-ACGGGGA-CCC--GC-A--CA-A-GUA-GCGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCUAAGC-UUGACA-UCC------------CACUUG------A-CC-U-C-UCCC-UAAU-C-GG-A-GAUU--UC-----CC-----------------------------------------UUCG----------------------------------------------------------------GG----GA---CA-GUGGA-GA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CUUG-CC--UUUAG---U-U-GC-C-AG-CA--U--------------------------------GAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UG-G-CACU-C-U-AG--AGGAN-U-GCCG-AG-G-A-UAA-CUC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--CU-U-A-GGGCUACACACGUGCUACAAUGG-GUGGUA--C-AGA-GGGU-U-GC-C-A-A-GCCG-CG-AGGU-G-----------GA-G-CUAA-UCC-CU-U-AAAGCCA-UUC-UCAGUUCGGA-UUGUAGGC-U-GAAACUC-GCCUACA-UGAAGCUGGAGU-UACUAGUA-AUCGC-AGA-UC-AG-AAU-GCUGCGGUG-AAU-GCGUU-CCCGGGUCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUUGGGGGCGCCC-GAAG-CCGG-UUA-G-CU-AA-CCU---------------------------------UUU---------------------------------------AGGAAG-C-GGCCGU-CGAAGGUGAAACCAA-UG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGAGAACCUG-CGGN-UGGAUCACCUCCUU-----------------------------------------------------------------------------------------
+>BraJapon Bradyrhizobium japonicum 5
+---------------------------------AACUUGAAGAGUUU-GAU-CCUGGCUCAGAGCGAAC-GC-UGGC-GGC-A-GG--C-CUUACACAU-GCAAGU-CGA-GCGG-GC-------------------------------------------------------GUA----------------------------------GCAA----------------------------------UAC---------------------------------------------------------GU--CAG-CGG-C-AG--A-CGGGUGAGU---AAC-GCGUGGG-A-A--CGU-AC-CUUUUGGU-UC--GGAAU-AA-CACAG-G-GAAA-CUU-GUG-CUAAUACC-G-GAU-AA---G----------------CCC---------------------------------------------------------------------------------------------U-UAC------------------------------------------------------------------------------------GGG-----------------GAAA--GA-----------------------UUUA---------------------UC-G--C----------CG----------AAAG---AUC-G-GCCCGCGU-CUG--A------UU-A-G-CU-A-G---UUGGUG-AG-G-UAAU-GG-CUCACCAA-GGCG-ACG-AUCAGUAGCUGGUCU-G-AG-------------A-GGAU-GAUC-AGCCACAUUGGGA-CUGA-GA-CACG-GCCCAAA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGGA--------------------CAAU-GGGG-GCAA-CCCUGAUCCAGCCAUGCCGCG-UGA-GU-GA-UGAA-GGCC--CU-AG-GG-UUGUAAA------------------------GCUCUUUU-GU-GCGG-GAA-G------A--------------------------U-AA------------------------U-GA-CGGU-A-C-CG--C-AAG---------AA-UAAGC-CCC-GGCUAAG-UUCGU---GCCAGCAGCCG-CGGUAAU-AC-GAAG-GGGGCU-A-GCG-UUGCU-CGGAAUCACUGGGCGUAAAGGGUGCG-UAG-G-CCGGUC-UUUAAG-UCAG-GGGUG-AAA-UC-CUGGAG-CUC-AA-CUCCAG-AAC-U-------------------------------------------GC-C-U----------------------------------------------UUGA-UAC-UGAAG-AUC-U-U-G-AG-UU-----CGGGAG-AGGUG-AGU-GGAACU-GCG--------------------AGU-GUA-GAG-GUGAAA-UU-C-GUAGAU-AUUCGCAAG-AAC-A-CCAG--U-G-GCGAAGGCGG--CUCACUG------GCCCG--------------------------------------------------------------AUA-CU--GACG-----CUGA-GG--CACGAAA-G-C-GUGGG-GAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AAUG-CCAGCCG-UUAGUGGG------UUUA----------------------------------C-UCACUAG-UGGC-GCA-CGUAACGCUU-UAA-GCAU-UCCGCCUG-GGGAGUACGGUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCG-GUGGAG-CA-UGUGGU-UUAAUUC-G-ACGCAACG-CGCAG-AA-CCUUA-CCAGCCC-UUGACA-UG-------------UCCAGG----A-C-CG-G-U-CGCA-GAGA-U-GU-G-ACCU--UC-----UC-----------------------------------------UUCG----------------------------------------------------------------GA-----G---CC-UGGAG-CA--------------------------------------------------CAGGU-GCUGCAUGGCUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UGGG-UUAA-GU-CCCGCAAC-GAGCGCAACC-CCCG-UC--CUUAG---U-U-GC-U-AC-CA--U--------------------------------UUAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGAG-CACU-C-U-AAG-GAGAC-U-GCCG-GU-G-A-UAA-GCC-GC-GAGG-A-AGG-U-GGGG-AUGACGUC--AAGUCCUCAU-G-GC-CCUUACG--GG-C-U-GGGCUACACACGUGCUACAAUGG-CGGUGA--C-AAU-GGGA-U-GC-G-A-A-GGGG-CA-ACCC-U-----------UC-G-CAAA-UCU-CA---AAAAGCC-GUC-UCAGUUCGGA-UUGGGCUC-U-GCAACUC-GAGCCCA-UGAAGUUGGAAU-CGCUAGUA-AUCGU-GGA-UC-AG-CAC-GCCACGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGGGA-GUUGGCUUUACCU-GAAG-ACGG-UGC-G-CU-AA-CCC---------------------------------GCA-A-------------------------------------GGGAGG-C-AGCCGG-CCACGGUAGGGUCAG-CG-ACU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGGGAACCUG-CGGC-UGGAUCACCU---------------------------------------------------------------------------------------------
+>CloTyrob Clostridium tyrobutyricum
+-------------------------------UUUAAAUUGAGAGUUU-GAU-CCUGGCUCAGGACGAAC-GC-UGGC-GGC-G-UG--C-CUAACACAU-GCAAGU-CGA-GCGA-UG---AAA------------------------------------------------CCCC----------------------------------UUCG----------------------------------GGGG---------------------------------------------------UGG--AU--UAG-CGG-C-GG--A-CGGGUGAGU---AAC-ACGUGGG-UAA--CCU-GC-CUCAAAGU-GG--GGGAU-AG-CCUUC-C-GAAA-GGA-AGA-UUAAUACC-G-CAU-AA-----A-GCC-A--A-GU--UUC---------------------------------------------------------------------------------------------A-CAU------------------------------------------------------------------------------------GGA--A-U--U--UG-GAU-GAAA--GG-A---------------------GUAA-------------------U-UC-G--C----------UU----------UGAG---AUG-G-ACCCGCGG-CGC--A------UU-A-G-UU-A-G---UUGGUG-GG-G-UAAU-GG-CCUACCAA-GACA-GCG-AUGCGUAGCCGACCU-G-AG-------------A-GGGU-GAUC-GGCCACAUUGGAA-CUGA-GA-UACG-GUCCAGA-CUC-C-UACG--GGAG-GC-A-GC-A-G-UGGGG-AAUAUUGCA--------------------CAAU-GGGC-GAAA-GCCUGAUGCAGCAACGCCGCG-UGA-GU-GA-UGAA-GGUC--UU-CG-GA-UUGUAAA------------------------GCUCUGUC-UU-UUGG-GAC-G------A--------------------------U-AA------------------------U-GA-CGGU-A-C-CA--A-AGG---------AG-GAAGC-CAC-GGCUAAC-UACGU---GCCAGCAGCCG-CGGUAAU-AC-GUAG-GUGGCG-A-GCG-UUGUC-CGGAUUUACUGGGCGUAAAGGGUGCG-UAG-G-CGGAUG-UUUAAG-UGAG-AUGUG-AAA-UA-CCCGGG-CUU-AA-CUUGGG-UGC-U-------------------------------------------GC-A-U----------------------------------------------UUCA-AAC-UGGAU-AUC-U-A-G-AG-UG-----CAGGAG-AGGAG-AAU-GGAAUU-CCU--------------------AGU-GUA-GCG-GUGAAA-UG-C-GUAGAG-AUUAGGAAG-AAC-A-CCAG--U-G-GCGAAGGCGA--UUCUCUG------GACUG--------------------------------------------------------------UAA-CU--GACG-----CUGA-GG--CACGAAA-G-C-GUGGG-UAGC-AAACAGG-AUUAGAUAC-----CCUGGUAG-UCCAC-GCCGUAAACGAUG-AGUA-CUAGGUG-UAGGAGG-----UAUCGA-CC---------------------------------CCUUCUG-UGCC-GCA-GUAAACACAU-UAA-GUAC-UCCGCCUG-GGAAGUACGAUC-GCAA-GAUU-AAA-ACUC-AAA-GGAAUUG-ACGGGGG-CCC--GC-A--CA-A-GCA-GCGGAG-CA-UGUGGU-UUAAUUC-G-AAGCAACG-CGAAG-AA-CCUUA-CCUGGAC-UUGACA-UC--------------CCCUG------A-AU-A-A-CCUA-GAGA-U-AG-G-CGAAG-C------CC-----------------------------------------UUCG----------------------------------------------------------------GG-----G---CA-GGG-A-GA--------------------------------------------------CAGGU-GGUGCAUGGUUGUCGUCA-GCUCGUGUC-GUGA-GAUGU-UAGG-UUAA-GU-CCUGCAAC-GAGCGCAACC-CUUA-UU--GUUAG---U-U-GC-U-AA-CA--U--------------------------------UCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGAG-CACU-C-U-AAC-GAGAC-U-GCCG-CG-G-U-UAA-CGC-G--GAGG-A-AGG-U-GGGG-AUGACGUC--AAAUCAUCAU-G-CC-CCUUAUG--UC-C-A-GGGCAACACACGUGCUACAAUGG-GCAGAA--C-AAA-GAGA-A-GC-A-A-U-ACCG-CG-AGGU-G-----------GA-G-CCAA-ACU-CA---AAAACUG-CUC-UCAGUUCGGA-UUGCAGGC-U-GAAACUC-GCCUGCA-UGAAGCUGGAGU-UGCUAGUA-AUCGC-GAA-UC-AG-CAU-GUCGCGGUG-AAU-ACGUU-CCCGGGCCUUGUA----CACACCGCCCGUC-ACA--CCAUGAGA-GCUGGCAACACCC-GAAG-UCCG-UAG-U-CU-AA-C-----------------------------------GUA-A---------------------------------------GAGG-A-CGCGGC-CGAAGGUGGGGUUAG-UG-AUU-GGGGUG-AAGUCGUAACAAGGUAGCCGUAGGAGAACCUG-CGGC-UGGAUCACCUCCUUUCU--------------------------------------------------------------------------------------
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/sequence.fasta	Wed Oct 23 18:28:17 2019 -0400
@@ -0,0 +1,494 @@
+>ENTD10
+GGTTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC
+GCCCTCCCGAAGGTTAAGCTATCTACTTCTGGTACAACCCACTCCCATGG
+TGTGACGGGCGGTGTGTACAAGGCCCGGGAACGTATTCACCGCGACATTC
+TGATTCGCGATTACTAGCGATTCCGACTTCATGGAGTCGAGTTGCAGACT
+CCAATCCGGACTTAGACGCACTTTCTGAGATTCGCTCACTATCGCTAGCT
+TGCTGCCCTCTGTATGCGCCATTGTAGCACGTGTGTAGCCCTACTCGTAA
+GGGCCATGATGATTTGACGTCATCCCCACCTTCCTCCAGTTTATCACTGG
+CAGTCTCCTTTGAGTTCTCAGCATTACCTGCTAGCAACAAAGGATAGGGG
+TTGCGCTCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGA
+CAGCCATGCAGCACCTGTCTCATAGTTCCCGAAGGCACAGAAATGTCTCC
+ATTTCCTTCTATGGATGTCAAGAGTAGGTAAGGTTCTTCGCGTTGCATCG
+AATTAAACCACATGCTCCACCGCTTGTGCGGGCCCCCGTCAATTCATTTG
+AGTTTTAACCTTGCGGCCGTACTCCCCAGGCGGTCAATTTATCGCGGTAG
+CTACGGGCGCCAGGTTCAAGACCCAACCCCCAAATTGACATCGTTTACAG
+CGTGGACTACCAGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGCACC
+TCAGCGTCAGTCTCTCTCCAAGGGGCTGCCTTCGCCTTCGGTATTCCTCC
+ACATCTCTACGCATTTCACCGCTACACGTGGAATTCTACCCCTCCCTAGA
+GGACTCTAGCTGCCCAGTCTGAAATGCAATTCCCAAGTTAAGCTCGGGGC
+TTTCACATCTCACTTAGACAACCGCCTGCGTGCCCTTTACGCCCAGTTAT
+TCCGATTAACGCTCGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGT
+TAGCCGGTGCTTCTTCTGCGACTAACGTCAATTGCATCACCTATTAGATA
+ATGCACCTTCCTCATCGCTGAAAGAACTTTACAACCCGAAAGCCTTCTTC
+ATTCACGCGGCATGGCTGCATCAGGGTTTCCCCCATTGTGCAATATTCCC
+CACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGC
+TGGTCATCCTCTCAAACCAGCTAGAGATCGTAAGCTTGGTGAGCCTTTAC
+CTCACCAACTACCTAATCTCACTTGGGCTCATCTCATGGCGCATGGTCCG
+AAGATCCCATACTTTAGTCCGTAGACATTACGCGGTATTAGCTACAGTTT
+CCCGTAGTTATCCCCCTCCATAAGGCAGATTCCCAAGCATTACTCACCCG
+TCCGCCACTCGTCAGCAAGAAAGCAAGCTTCCTCCTGTTACCGTTCGACT
+TGCATGTGTTAAGCCTGCCGCCAGCGTTCAATCTGAGCCATAATCAAACC
+CTA
+>ENTG06
+GGGTTTGATCCTGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATGC
+AAGTCGAGGGGCAGCATGGTCTTAGCTTGCTAAGACTGATGGCGACCGGC
+GCACGGGTGCGTAACGCGTATGCAACTTACCTTATAGAGGGGGATAGCTC
+GTTTAACGACGAATTAATACCGCATATACAAGTAGCTCGGCATCGAGTAA
+CTTGGAAATGAATTTCGCTATAAGATAGGCATGCGTCCCATTAGCTTGTT
+GGTGAGGTAACGGCTCACCAAGGCAACGATGGGTAGGGGAACTGAGAGGT
+TTATCCCCCACACTGGTACTGAGACACGGACCAGACTCCTACGGGAGGCA
+GCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGAACCAGCCAAATCGC
+GTGAAGGATGACTGTCTTATGGATTGTAAACTTCTTTTATATGGGAATAA
+TCACAGGTACGTGTACCTGTTTGAATGTACCATATGAATAAGCATCGGCT
+AACTCCGTGCCGGCAGCCGCGGTAATACGGAGGATGCGAGCGTTATCCGG
+ATTTATTGGGTTTAAAGGGTGCGTAGGTGGTCTGATAAGTCAGCGGTGAA
+ATCTCCGAGCTCAACTCGGAAACTGCCGTTGAAACTGTTAGACTTGAGTG
+CAGATGAGGTAGGCGGAATGCGTGGTGTAGCGGTGAAATGCATAGATATC
+ACGCAGAACTCCAATTGCGAAGGCAGCTTACTAAGGTGCAACTGACACTG
+AAGCACGAAAGCGTGGGTATCAAACAGGATTAGATACCCTGGTAGTCCAC
+GCTGTAAACGATGATTACTGGGNCGTATGCGATATACAGTATGCTCCTAA
+GCGAAAGCGTTAAGTAATCCACCTGGGGAGTACGCCGGCAACGGTGAAAC
+TCAAAGGAATTGACGGGGGCCCGCACAAGCGGAGGAACATGTGGTTTAAT
+TCGATGATACGCGAGGAACCTTACCTGGGTTTAAACTTTAGCTGACCGCT
+CGAGAGATCGAGTTTCCCTTCGGGGCAGCTATTTAGGTGCTGCATGGTTG
+TCGTCAGCTCGTGCCGTGAGGTGTCGGCTTAAGTGCCATAACGAGCGCAA
+CCCCTGTCTACGGTTACCATCAGGTTAAGCTGGGGACTCCGTAGAGACTG
+CCGTCGTAAGGCGTGAGGAAGGTGGGGATGACGTCAAATCAGCACGGCCC
+TTACATCCAGGGCGACACACGTGTTACAATGGTGAGGACAAAGGGACGCT
+ACTAGGCGACTAGATGCAAATCTCAAAACCTCATCACAGTTCGGATCGGA
+GTCTGCAACTCGACTCCGTGAAGCTGGATTCGCTAGTAATCGCGCATCAG
+CCATGGCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCAAG
+CCATGGGAGTTCGGAGTACCTAAAGTCCGTACCTGCGAGGGTCGGCCTAG
+GGTAATACGAGTGACTGGGGCTAAGTCGTAACAAGGTAACCA
+>WH044-5C
+AGGGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG
+CAAGTCGAGCGATGAAGATGTAGCTTGCTACATTGGATTAGCGGCGGACG
+GGTGAGTAATATTTAGGAATCTACCTAGTAGTGGGGGATAGCCCGAGGAA
+ACTCGGATTAATACCGCATACGACCTACGGGAGAAAGGGGGCTTTTAGCT
+CTCGCTATTAGATGAGCCTAAACCGGATTAGCTAGTTGGTGGGGTAAAGG
+CCTACCAAGGCGACGATCTGTAGCTGGTCTGAGAGGATGATCAGCCACAC
+TGGGACTGAGACACGGCCCAGACCCCTACGGGAGGCAGCAGTGGGGAATA
+TTGGACAATGGGCGAAAGCCTGATCCAGCCATGCCGCGTGTGTGAAGAAG
+GCCTTTTGGTTGTAAAGCACTTTAAGCAGTGAGGAAGACTCTATGGTTAA
+TACCCATAGACGATGACGTTAACTGCAGAATAAGCACCGGCTAACTCTGT
+GCCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATTACTG
+GGCGTAAAGCGAGCGTAGGTGGTTATAAAAGTCAGATGTGAAATCCCTGG
+GCTCAACCTAGGAACTGCATCTGAAACTCTATAACTAGAGTAGGTGAGAA
+GGGAGTAGAATTTCAGGTGTAGCGGTGAAATGCGTAGATATCTGAAGGAA
+TACCGATGGCGAAAGGAGCTCCCTGGCATCATACTGACACTNAAGGTTCG
+AAAGCGTGGGTAGCAAACAGGATTAGATACCCTGGTATCCACGCCGTAAA
+CGATGTCTACTAGTCGTTGGGTTCCTTGAGGACTTAGTGACGCAGCTAAC
+GCAATAAGTAGACCGCCTGGGGAGTACGGCCGCAAGGTTAAAACTCAAAT
+GAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATG
+CAACGCGAAGAACCTTACCTGGTCTTGACATACAGAGAATCTTGTAGAGA
+TACGAGAGTGCCTTCGGGAATTCTGATACAGGTGCTGCATGGCTGTCGTC
+AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCT
+ATCCTTAGTTGCCAGCGGATGAAGCCGGGGACTCTAAGGAGACTGCCAGT
+GACAAACTGGAGGAAGGCGGGGACGACGTCAAGTCATCATGGCCCTTACG
+ACCAGGGCTACACACGTGCTACAATGGTAGGTACAAAGGGAAGCTACATA
+GCGATATGATGCCAATCTCAAAACGCCTATCTCAGTCCAGATTGGAGTCT
+GCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCGGATCAGAATG
+CCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCACG
+GGAGTTGATTGCACCAGAAGTGGGTAGCCTAACTTTGGAGGGCGCTCACC
+ACGGTGTGGTCGATGACTGGGGTGAAGTCGTAACAAGGTAACCA
+>WH044-7E
+AGGGTTTGATTATGGCTCAGAACGAACGCTGGCGGCAGGCCTAACACATG
+CAAGTCGAGCGCCACCTTCGGGTGGAGCGGCGGACGGGTTAGTAACGCGT
+GGGAACGTACCCAGATCTAAGGAATAGCCACTGGAAACGGTGAGTAATAC
+CTTATACGCCCTTCGGGGGAAAGATTTATCGGATTTGGATCGGCCCGCGT
+TAGATTAGTTAGTTGGTGGGGTAATGGCCTACCAAGACTACGATCTATAG
+CTGGTTTGAGAGGATGATCAGCAACACTGGGACTGAGACACGGCCCAGAC
+TCCTACGGGAGGCAGCAGTGGGGAATCTTAGACAATGGGCGCAAGCCTGA
+TCTAGCCATGCCGCGTGAGTGATGAAGGCCTTAGGGTCGTAAAGCTCTTT
+CGCCTGTGATGATAATGACAGTAGCAGGTAAAGAAACCCCGGCTAACTCC
+GTGCCAGCAGCCGCGGTAATACGGAGGGGGTTAGCGTTGTTCGGAATTAC
+TGGGCGTAAAGCGCGCGTAGGCGGACTAATCAGTCAGANGTGAAATCCCA
+GGGCTCAACCCTGGGACTGCCTTTGATACTGTTAGTCTTGAGTTCGAGAG
+AGGTGAGTGGAATTCCAAGTGTAGAGGTGAAATTCGTAGATATTTGGAGG
+AACACCAGTGGCGAAGGCGGCTCACTGGCTCGATACTGACGCTGAGGTGC
+GAAAGTGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACACCGTA
+AACGATGAATGCCAGTCGTTGGATAGTATACTATTCAGTGACACACCTAA
+CGGATTAAGCATTCCGCCTGGGGAGTATGGTCGCAAGATTAAAACTCAAA
+GGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAC
+GCAACGCGCAGAACCTTACCAACCCTTGACATCCTGTGCTACCCGAGAGA
+TCGGGCGTTCCCTTAGGGGACGCAGTGACAGGTGCTGCATGGCTGTCGTC
+AGCTCGTGTCGTGAGATGTTCGGTTAAGTCCGGCAACGAGCGCAACCCAC
+ATCTTTAGTTGCCAGCATTCAGTTGGGCACTCTAAAGAAACTGCCCGTGA
+TAAGCGGGAGGAAGGTGTGGATGACGTCAAGTCCTCATGGCCCTTACGGG
+TTGGGCTACACACGTGCTACAATGGTAGTGACAGTGAGTTAATCTCCAAA
+AACTATCTCAGTTCGGATTGGGGTCTGCAACTCGACCCCATGAAGTCGGA
+ATCGCTAGTAATCGCGTAACAGCATGACGCGGTGAATACGTTCCCGGGCC
+TTGTACACACCGCCCGTCACACCATGGGAGTTGGTTCTACCCGACGGCCG
+TGCGCTAACCTTTTGGAGGCAGCGGACCACGGTAGGATCAGCGACTGGGG
+TGAAGTCGTAACAAGGTAACCA
+>WH044-7F
+GGCTACCTTGTTACGACTTAGCCCTAGTTACCAGTTTTACCCTAGGCAGC
+TCCTTGCGGTCACCGACTTCAGGTACCCCCAGCTTCCATGGCTTGACGGG
+CGGTGTGTACAAGGCCCGGGAACGTATTCACCGGATCATGGCTGATATCC
+GATTACTAGCGATTCCAGCTTCACGGAGTCGAGTTGCAGACTCCGATCCG
+AACTGTGACCAGTTTTATAGATTCGCTCCTTGTTGCCAAGTGGCTGCTCG
+CTGTACTGGCCATTGTAGCACGTGTGTGGCCCAGGACGTAAGGGCCGTGA
+TGATTTGACGTCATCCCCACCTTCCTCGCGGTTTACACCGGCAGTCTTGT
+TAGAGTTCCCGACTTTACTCGATGGCAACTAACAATAGGGGTTGCGCTCG
+TTATAGGACTTAACCTGACACCTCACGGCACGAGCTGACGACAACCATGC
+AGCACCTTGTAAATTGCCCGAAGGAAAGTCTATCTCTAAACCTGTCAATC
+TACATTTAAGCCCTGGTAAGGTTCCTCGCGTATCATCGAATTAAACCACA
+TGCTCCACCGCTTGTGCGGGCCCCCGTCAATTCCTTTGAGTTTCACACTT
+GCGTGCGTACTCCCCAGGTGGGATACTTATCACTTTCGCTTAGCCACTCA
+AACCAAAGTTCAAACAGCTAGTATCCATCGTTTACGGCGTGGACTACCAG
+GGTATCTAATCCTGTTCGCTACCACGCTTTCGTCCATCAGCGTCAATATA
+GTGTTAGTAACCTGCCTTCGCAATCGGTATTCTATGTAATATCTATGCAT
+TTCACCGCTACACTACATATTCTAGTTACTTCACACTAATTCAAGATAAA
+CAGTATCAATGGCATTTTTCCAGTTGAGCTGAAAACTTTCACCACTGACT
+TATCTACCCGCNTACGGACCCTTTAAACCCAATGATTCCGGATAACGCTC
+GAATCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGATCCTTAT
+TCTTACAGTACCGTCAATTACCCTCGCAAGGGTAGGTTTCTTCCTGTATA
+AAAGTAGTTTACAATCCATAAGACATTCTTCCTACACGCGGCATGGCTGG
+TTCAGAGTTGCCTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGG
+AGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGATCTCCCTCTCAGGACC
+CCTACCCATCATCGCCTTGGTATGCCGTTACCATACCAACTAGCTAATGG
+GACGCATACTCATCTTAATCCGATAAATCTTTAATAACTAATCGATGCCA
+ATTAATCATCACATAAGGTATTAATCCAAATTTCTCTGGGCTATCCCTTT
+GATTAAGGTAGATTGTATACGCGTTACGCACCCGTGCGCCGGTCTCTATA
+TAGCAAGCTATATATACCCCTCGACTTGCATGTGTTAAGCCTGCCGCTAG
+CGTTCATCCTGAGCCAGAATCGAACCCTA
+>WH044-8C
+AGGGTTTGATTATGGCTCAGAACGAACGCTGGCGGCAGGCCTAACACATG
+CAAGTCGAGCGCCACCTTCGGGTGGAGCGGCGGACGGGTTAGTAACGCGT
+GGGAACGTACCCAGATCTAAGGAATAGCCACTGGAAACGGTGAGTAATAC
+CTTATACGCCCTTCGGGGGAAAGATTTATCGGATTTGGATCGGCCCGCGT
+TAGATTAGTTAGTTGGTGGGGTAATGGCCTACCAAGACTACGATCTATAG
+CTGGTTTGAGAGGATGTTCAGCAACACTGGGACTGAGACACGGCCCAGAC
+TCCTACGGGAGGCAGCAGTGGGGAATCTTAGACAATGGGCGCAAGCCTGA
+TCTAGCCATGCCGCGTGAGTGATGAAGGCCTTAGGGTCGTAAAGCTCTTT
+CGCCTGTGATGATAATGACAGTAGCAGGTAAAGAAACCCCGGCTAACTCC
+GTGCCAGCAGCCGCGGTAATACGGAGGGGGTTAGCGTTGTTCGGAATTAC
+TGGGCGTAAGGCGCGCGTAGGCGGACTAATCAGTCAGAGGTGAAATCCCA
+GGGCTCAACCCTGGAACTGCCTTTGATACTGTTAGTCTTGAGTTCGAGAG
+AGGTGAGTGGAATTCCAAGTGTAGAGGTGAAATTTGTAGATATTTGGAGG
+AACACCAGTGGCAAAGGCGGCTCACTGGCTCGATACTGACGCTGAGGTGC
+GAAAGTGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACACCGTA
+AACGATGAATGCCAGTCGTTGGATAGTATACTATTCAGTGACACACCTAA
+CGGATTAAGCATTCCGCCTGGGGAGTACGGTCGCAAGATTAAAACTCAAA
+GGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAC
+GCAACGCGCAGAACCTTACCAACCCTTGACATCCTGTGCTAACCCGAGAG
+ATCGGGCGTTCCCTTAGGGGACGCAGTGACAGGTGCTGCATGGCTGTCGT
+CAGCTCGTGTCGTGAGATGTTCGGTTAAGTCCGGCAACGAGCGCAACCCA
+CATCTTTAGTTGCCAGCATTTAGTTGGGCACTCTAAAGAAACTGCCCGTG
+ATAAGCGGGAGGAAGGTGTGGATGACGTCAAGTCCTCATGGCCCTTACGG
+GTTGGGCTACACACGTGCTACAATGGTAGTGACAGTGAGTTAATCTCCAA
+AAACTATCTCAGTTCGGATTGGGGTCTGCAACTCGACCCCATGAAGTCGG
+AATCGCTAGTAATCGCGTAACAGCATGACGCGGTGAATACGTTCCCGGGC
+CTTGTACACACCGCCCGTCACACCATGGGAGTTGGTTCTACCCGACGGCC
+GTGCGCTAACCTTTTGGAGGCAGCGGACCACGGTAGGATCAGCGACTGGG
+GTGAAGTCGTAACAAGGTAGCCA
+>WH044-8D
+AGGGTTCGATCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG
+CAAGTCGAGCGATGAAGGTATAGCTTGCTATACTGGATTAGCGGCGGACG
+GGTGCGTAATACTTAGGAATCTGCCCAGTAGTGGGGGACAACACGAGGAA
+ACTCGTGCTAATACCGCATACACCCTACGGGGAAAAGGGGGCAACTTGTT
+GCTCTCGCTATTGGATGAGCCTAAGCAAGATTAGCTAGTTGGTGGGGTAA
+GGGCCTACCAAGGCGACGATCTTTAGCTGGTCTGAGAGGATGATCAGCCA
+CACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGA
+ATATTGGACAATGGGGGAAACCCTGATCCAGCCATGCCGCGTGTGTGAAG
+AAGGCCTTTTGGTTGTAAAGCACTTTAAGCAGGGAGGAAAGCTCGTATGT
+TAATACCGTACGAGTGTGACGTTACCTGCAGAATAAGCACCGGCTAACTC
+TGTGCCAGCAGCCGCGGTAATACAGAGGGTGCGAGCGTTAATCGGAATTA
+CTGGGCGTAAAGCGCGCGTAGGCGGTTTGATCAGTCAGATGTGAAAGCCC
+AGGGCTTAACCTTGGAACTGCATCTGATACTGTCAGACTAGAGTATGGGA
+GAGGAAAGTAGAATTCCNGGTGTAGCGGTGAAATGCGTAGAGATCTGGAG
+GAATACCGATGGCGAAGGCAGCTTTCTGGCCCAATACTGACGCTGAGGTG
+CGAAAGCGTGGGTAGCAAACGGGATTAGATACCCCGGTATCCACGCCGTA
+AACGATGTCTACTAGCCGTTGGGGAACTTGATTCTTTAGTGGCGCAGCTA
+ACGCAATAAGTAGACCGCCTGGGGAGTACGGCCGCAAGGTTAAAACTCAA
+ATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGA
+AGCAACGCGAAGAACCTTACCTGGTCTTGACATATAGAGAACTTACTAGA
+GATAGTTTGGTGCCTTCGGGAACTCTAATACAGGTGCTGCATGGCTGTCG
+TCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCC
+TTTTCCTTAGTTACCAGCGGTTCGGCCGGGCACTTTAAGGATACTGCCAG
+TGACAAACTGGAGGAAGGCGGGGACGACGTCAAGTCATCATGGCCCTTAC
+GACCAGGGCTACACACGTGCTACAATGGTAAGTACAGAGGGTCGCTAGCC
+CGCGAGGGTATGCCAATCTCACAAAGCTTATCGTAGTCCGGATTGGAGTC
+TGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCGGATCAGAAT
+GTCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCAT
+GGGAGTCTATTGCACCAGAAGTGGTTAGCCTAACCTTTTAGGATGGCGAT
+CACCACGGTGTGGTCGATGACTGGGGTGAAGTCGTAACAAGGTAACCA
+>WH044-8G
+GGTTACCTTGTTACGACTTAGCCCTAGTTACCAGTTTTACCCTAGGCAGC
+TCCTTGCGGTCACCGACTTCAGGTACCCCCAGCTTCCATGGCTTGACGGG
+CGGTGTGTACAAGGCCCGGGAACGTATTCACCGGATCATGGCTGATATCC
+GATTACTAGCGATTCCAGCTTCACGGAGTCTAGTTGCAGACTCCGATCCG
+AACTGTGACCAGTTTTATAGATTCGCTCCTTGTTGCCAAGTGGCTGCTCG
+CTGTACTGGCCATTGTAGCACGTGTGTGGCCCAGGACGTAAGGGCCGTGA
+TGATTTGACGTCATCCCCACCTTCCTCGCGGTTTACACCGGCAGTCTTGT
+TAGAGTTCCCGACTTTACTCGATGGCAACTAACAATAGGGGTTGCGCTCG
+TTATAGGACTTAACCTGACACCTCACGGCACGAGCTGACGACAACCATGC
+AGCACCTTGTAAATTGCCCGAAGGAAAGTCTATCTCTAAACCTGTCAATC
+TACATTTAAGCCCTGGTAAGGTTCCTCGCGTATCATCGAATTAAACCACA
+TGCTCCACCGCTTGTGCGGGCCCCCGTCAATTCCTTTGAGTTTCACACTT
+GCGTGCGTACTCCCCAGGTGGGATACTTATCACTTTCGCTTAGCCACTCA
+AACCAAAGTTCAAACAGCTAGTATCCATCGTTTACGGCGTGGACTACCAG
+GGTATCTAATCCTGTTCGCTACCCACGCTTTCGTCCATCAGCGTCAATAT
+AGTGTTAGTAACCTGCCTTCGCAATCGGTATTCTATGTAATATCTATGCA
+TTTCACCGCTACACTACATATTCTAGTTACTTCACACTNAATTCAAGATA
+AACAGTATCAATGGCATTTTTCCAGTTGAGCTGAAAACTTTCACCACTGA
+CTTATCTACCCGCCTGCGGACCCTTTAAACCCAATGATTCCGGATAACGC
+TCGAATCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGATCCTT
+ATTCTTACAGTACCGTCAATTACCCTCGCAAGGGTAGGTTTCTTCCTGTA
+TAAAAGTAGTTTACAATCCATAAGACATTCTTCCTACACGCGGCATGGCT
+GGTTCAGAGTTGCCTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTA
+GGAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGATCTCCCTCTCAGGA
+CCCCTACCCATCATCGCCTTGGTATGCCGTTACCATACCAACTAGCTAAT
+GGGACGCATACTCATCTTAATCCGATAAATCTTTAATAACTAATCGATGC
+CAATTAATCATCACATAAGGTATTAATCCAAATTTCTCTGGGCTATCCCT
+TTGATTAAGGTAGATTGTATACGCGTTACGCACCCGTGCGCCGGTCTCTA
+TATAGCAAGCTATTTATACCCCTCGACTTGCATGTGTTAAGCCTGCCGCT
+AGCGTTCATCCTGAGCCAGAATCGAACCCTA
+>WH044-9B
+AGGGTTCGATTATGGCTCAGGATGAACGCTAGCGGCAGGCTTAACACATG
+CAAGTCGAGGGGTATATATAGCTTGCTATATAGAGACCGGCGCACGGGTG
+CGTAACGCGTATACAATCTACCTTAATCAAAGGGATAGCCCAGAGAAATT
+TGGATTAATACCTTATGTGATAATTAATTGGCATCGATTAGTTATTAAAG
+ATTTATCGGATTAAGATGAGTATGCGTCCCATTAGCTAGTTGGTATGGTA
+ACGGCATACCAAGGCGATGATGGGTAGGGGTCCTGAGAGGGAGATCCCCC
+ACACTGGTACTGAGACACGGACCAGACTCCTACGGGAGGCAGCAGTGAGG
+AATATTGGTCAATGGAGGCAACTCTGAACCAGCCATGCCGCGTGTAGGAA
+GAATGTCTTATGGATTGTAAACTACTTTTATACAGGAAGAAACCTACCCT
+TGCGAGGGTAATTGACGGTACTGTAAGAATAAGGATCGGCTAACTCCGTG
+CCAGCAGCCGCGGTAATACGGAGGATTCGAGCGTTATCCGGAATCATTGG
+GTTTAAAGGGTCCGTAGGCGGGTAGATAAGTCAGTGGTGAAAGTTTTCAG
+CTCAACTGGAAAAATGCCATTGATACTGTTTATCTTGAATTAGTGTGAAG
+TAACTAGAATATGTAGTGTAGCGGTGAAATGCATAGATATTACATAGAAT
+ACCGATTGCGAAGGCAGGTTACTAACACTATATTGACGCTGATGGACGAA
+AGCGTGGGTAGCGAGCAGGATTAGATACCCTGGTAGTCCACGCCGTAAAC
+GATGGATACTAGCTGTTTGAACTTTGGTTTGAGTGGCTAAGCGAAAGTGA
+TAAGTATCCCACCTGGGGAGTACGCACGCAAGTGTGAAACTCAAAGGAAT
+TGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGATAC
+GCGAGGAACCTTACCAGGGCTTAAATGTAGATTGACAGGTTTAGAGATAG
+ACTTTCCTTCGGGCAATTTACAAGGTGCTGCATGGTTGTCGTCAGCTCGT
+GCCGTGAGGTGTCAGGTTAAGTCCTATAACGAGCGCAACCCCTATTGTTA
+GTTGCCATCGAGTAAAGTCGGGAACTCTAACAAGACTGCCGGTGTAAACC
+GCGAGGAAGGTGGGGATGACGTCAAATCATCACGGCCCTTACGTCCTGGG
+CCACACACGTGCTACAATGGCCAGAACAGCGAGCAGCCACTTGGCAACAA
+GGAGCGAATCTATAAAACTGGTCACAGTTCGGATCGGAGTCTGCAACTCG
+ACTCCGTGAAGCTGGAATCGCTAGTAATCGGATATCAGCCATGATCCGGT
+GAATACGTTCCCGGGCCTTGTACACACCGCCCGTCAAGCCATGGAAGCTG
+GGGGTACCTGAAGTCGGTGACCGCAAGGAGCTGCCTAGGGTAAAACTGGT
+AACTAGGGCTAAGTCGTAACAAGGTAACCA
+>WH044-9D
+GGTTACCTTGTTACGACTTCACCCCAGTCATCGACCACACCGTGGTGAGC
+GCCCTCCAAAGTTAGGCTACCCACTTCTGGTGCAATCAACTCCCGTGGTG
+TGACGGGCGGTGTGTACAAGGCCCGGGAACGTATTCACCGCGGCATTCTG
+ATCCGCGATTACTAGCGATTCCGACTTCATGGAGCCGAGTTGCAGACTCC
+AATCTGGACTGAGATAGGCGTTTTGAGATTGGCATCATATCGCTATGTAG
+CTTCCCTTTGTACCTACCATTGTAGCACGTGTGTAGCCCTGGTCGTAAGG
+GCCATGATGACTTGACGTCGTCCCCGCCTTCCTCCAGTTTGTCACTGGCA
+GTCTCCTTAGAGTCCCCGGCATTATCCGCTGGCAACTAAGGNTAGGGGTT
+GCGCTCGTTGCGGGACTTAACCCAACATCTCACGACACGAGCTGACGACA
+GCCATGCAGCACCTGTATCAGAATTCCCGAAGGCACTCTCGTATCTCTAC
+AAGATTCTCTGTATGTCAAGACCAGGTGAGGTTCTTCGCGTTGCATCGAA
+TTAAACCACATGCTCCACCGCTTGTGCGGGCCCCCGTCAATTCATTTGAG
+TTTTAACCTTGCGGCCGTACTCCCCAGGCGGTCTACTTATTGCGTTAGCT
+GCGTCACTAAGTCCTCAAGGAACCCAACGACTAGTAGACATCGTTTACGG
+CGTGGACTACCAGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGACCT
+CAGTGTCAGTATGATGCCAGGGAGCTGCCTTCGCCATCGGTATTCCTTCA
+GATATCTACGCATTTCACCGCTACACCTGAAATTCTACTCCCCTCTCACN
+TACTCTAGTTATAGAGTTTCAGATGCAGTTCCTAGGTTGAGCCCAGGGAT
+TTCACATCTGACTTTTATAACCACCTACGCTCGCTTTACGCCCAGTAATT
+CCGATTAACGCTTGCACCCTCTGTATTACCGCGGCTGCTGGCACAGAGTT
+AGCCGGTGCTTATTCTGCAGTTAACGTCATCGTCTATGGGTATTAACCAT
+AGAGTCTTCCTCACTGCTTAAAGTGCTTTACAACCAAAAGGCCTTCTTCA
+CACACGCGGCATGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCC
+ACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCT
+GATCATCCTCTCAGACCAGCTACAGATCGTCGCCTTGGTAGGCCTTTACC
+CCACCAACTAGCTAATCCGGTTTAGGCTCATCTAATAGCGAGAGCTAAAA
+GCCCCCTTTCTCCCGTAGGTCGTATGCGGTATTAATCCGAGTTTCCTCGG
+GCTATCCCCCACTACTAGGTAGATTCCTAAATATTACTCACCCGTCCGCC
+GCTAATCCAATGTAGCAAGCTACATCTTCATCGCTCGACTTGCATGTGTT
+AAGCCTGCCGCCAGCGTTCAATCTGAGCCATAATCAAACCCTA
+>WH051A05
+AGGGTTTGATTATGGCTCAGAGTGAACGCTGGCGGCGTGCTTAACACATG
+CAAGTCGAACGAGAACGGGTTATAGCTTGCTATAATTGTCAGCTAAGTGG
+CGCACGGGTGAGTAATGTATAGGCAATATGCCTCTTACTAAGGGATAACA
+AATGGAAACGTTTGCTAATACCTTATACTCCTTATTAACAGAAGTTAATA
+AGGGAAAGATTTATTGGTAAGAGATTAGCCTGTATTGTATCAGTTAGTTG
+GTGGGGTAATGGCTTACCAAGACTATGACACGTAACTGGTTTGAGAGGAT
+GATCAGTCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAG
+CAGTGGGGAATATTGCACAATGGACGAAAGTCTGATGCAGCAACGCCGCG
+TGGAGGATGACACATTTCGGTGCGTAAACTCCTTTTATATGAGAAGATAA
+TGACGGTATTATATGAATAAGCACCGGCTAACTCCGTGCCAGCAGCCGCG
+GTAATACGGGGGGTGCAAGCGTTACTCGGAATCACTGGGCGTAAAGAGCA
+TGTAGGCGGATTAATAAGTTTGAAGTGAAATCCTATAGCTTAACTATANA
+ACTGCTTTGAAAACTGTTAATCTAGAATGTGGGAGAGGTAGATGGAATTT
+CTGGTGTAGGGGTAAATCCGTAGAGATCAGAAGGAATACCGATTGCGAAG
+GCGATCTACTGGAACATTATTGACGCTGAGATGCGAAAAGCGTGGGGAGC
+AAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTACACTAG
+TTGTTGTGAGACTTGATCTTGCAGTAATGCAGTTAACACATTAAGTGTAC
+CGCCTGGGGAGTACGGTCGCAAGATTAAAACTCAAAGGAATAGACGGGGA
+CCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGACGATACACGAAGAAC
+CTTACCTGGACTTGACATAGTAAGAACTTTCTAGAGATAGATTGGTGTCT
+GCTTGCAGAAACTTATATACAGGTGCTGCACGGCTGTCGTCAGCTCGTGT
+CGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGT
+TGCTAACAGTTCGGCTGAGAACTCTAGACAGACTGCCTACGCAAGTAGGA
+GGAAGGTGAGGACGACGTCAAGTCATCATGGCCCTTACGTCCAGGGCTAC
+ACACGTGCTACAATGGGATATACAAAGAGCGGCAATACGGTGACGTGGAG
+CAAATCTTATAAAATATCTCCCAGTTCGGATTGTAGTCTGCAACTCGACT
+ACATGAAGTTGGAATCGCTAGTAATCGTAGATCAGCTATGCTACGGTGAA
+TACGTTCCCGGGTCTTGTACTCACCGCCCGTCACACCATGGGAGTCGAAC
+TCATTCGAAGCGGGGATGCTAAAATAGCTACCTTCCACAGTGGATTTGGC
+GACTGGGGTGAAGTCGTAACAAGGTAACCA
+>WH051F03
+GGTTACCTTGTTACGACTTAGCCCTAGTTACCAGTTTTACCCTAGGCCGC
+TCCTCTCGGTGACGAACTTCAGGCACCCCCAGCTTCCATGGCTTGACGGG
+CGGTGTGCACAAGGCCCGGGAACGTATTCACCGGATCATGGCTGATATCC
+GATTACTAGCGATTCCAGCTTCACGGAGTCGAGTTGCAGACTCCGATCCG
+AACTGTGATATGGTTTATAGATTCGCTCCTATTCGCATAGTAGCTGCTCA
+TTGTCCATACCATTGTAGCACGTGTGTAGCCCAGGACGTAAGGGCCGTGA
+TGATTTGACGTCATCCCCACCTTCCTCACGGGTTGCACCGGCAGTCTTGC
+TAGAGTCCTCAGCATTACCTGCTAGCAACTAACAATAGGGGTTGCGCTCG
+TTATAGGACTTAACCTGACACCTCACGGCACGAGCTGACGACAACCATGC
+AGCACCTTGTAAATTGTCCGAAGAAAAATCTATCTCTAAACCTGTCAATC
+TACATTTAAGCCCTGGTAAGGTTCCTCGCGTATCATCGAATTAAACCACA
+TGCTCCACCGCTTGTGCGGGCCCCGTCAATTCCTTTGAGTTTCATTCTTG
+CGAACGTACTCCCCAGGNGGGATACTTATCACTTTCGCTTAGTCACTGAA
+ATAATCCAACAACTAGTATCCATCGTTTACGGCGTGGACTACCAGGGTAT
+CTAATCCTGTTCGCTCCCCACGCTTTCGTCCATGAGCGTCAGTACATACG
+TAGTAGACTGCCTTCGCAATCGGTATTCTAAGTAATCTCTAAGCATTTCA
+CCGCTACACTACTTATTCTATCTACTTCCATATGACTCAAGTCAACCAGT
+ATCAAAGGCAGTTCCATAGTTAAGCTATGGGATTTCACCTCTGACTTAAT
+TGACCGCCTGCGGACCCTTTAAACCCAATGATTCCGGATAACGCTTGCAC
+CCTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTATTCTT
+ACAGTACCGTCAGTACTCTACACGTAGAGCAGTTTCTTCCTGTATAAAAG
+CAGTTTACAACCCATAGGGCCGTCTTCCTGCACGCGGCATGGCTGGATCA
+GAGTTGCCTCCATTGTCCAATATTCCTCACTGCTGCCTCCCGTAGGAGTC
+TGGTCCGTGTCTCAGTACCAGTGTGGGGGATAATCCTCTCAGACCCCCTA
+CCTATCGATGCCATGGTAAGCCGTTACCTCACCATCTAACTAATAGGACG
+CATAGTCATCATGTACCAATAAATTTTTAATTACTAAATCATGCGATCCA
+ATAACATTATGGAGTGTTAATCTTCATTTCTAAAGGCTATCCTCCAGTAC
+ACGGTAGATTCTATACGCGTTACGCACCCGTCCGCCGGTCGACGCCTGAA
+GCAAGCTCCATCGTTTCCCCTCGACTTGCATGTGTTAAGCCTGCCGCTAG
+CGTTCATCCTGAGCCAGAATCGAACCCTA
+>WH051F10
+AGGGTTTGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG
+CAAGTCGAACGGTAACAGGTCTTCGGATGCTGACGAGTGGCGAACGGGTG
+AGTAATGTATCGGAACGTGCCCAGTAGTGGGGGATAACTACTCGAAAGAG
+TGGCTAATACCGCATGAGAACTGAGGTTGAAAGCGGGGGACCTTCGGGCC
+TCGCGCTACTGGAGCGGCCGATATCAGATTAGGTAGTTGGTGGGGTAAAG
+GCCTACCAAGCCGACGATCTGTAGCTGGTCTGAGAGGACGACCAGCCACA
+CTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAAT
+TTTGGACAATGGACGCAAGTCTGATCCAGCAATGCCGCGTGCAGGACGAA
+GGCCTTCGGGTTGTAAACTGCTTTTGTACAGAACGAAAGGGCTCTGGTTA
+ATACCTGGGGCAGATGACGGTACTGTAAGAATAAGCACCGGCTAACTACG
+TGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTACT
+GGGCGTAAAGCGTGCGCAGGCGGTTTTGTAAGACCGATGTGAAATCCCCG
+GGCTCAACCTGGGAACTGCATTGGTGACTGCAAGGCTGGAGTGCGGCAGA
+GGGGGATGGAATTCCGCGTGTAGCAGTGAAATGCGTAGATATGCGGAGGA
+ACACCGATGGCGAAGGCAATCCCCTGGGCCTGCACTGACGCTCATGCACG
+AAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAA
+ACGATGTCAACTGGTTGTTGGGTATTTGCTTACTCAGTAACGAAGCTAAC
+GCGTGAAGTTGACCGCCTGGGGAGTACGGCCGCAAGGTTGAAACTCAAAG
+GAATTGACGGGGACCCGCACAAGCGGTGGATGATGTGGTTTAATTCGATG
+CAACGCGAAAAACCTTACCCACCTTTGACATGGCAGGAATTCCGAAGAGA
+TTTGGAAGTGCTCGAAAGAGAACCTGCACACAGGTGCTGCATGGCTGTCG
+TCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCC
+TTGCCATTAGTTGCTACGAAAGGGCACTCTAATGGGACTGCCGGTGACAA
+ACCGGAGGAAGGTGGGGATGACGTCAAGTCCTCATGGCCCTTATAGGTGG
+GGCTACACACGTCATACAATGGCCGGTACAAAGGGTAGCCAACCCGCGAG
+GGGGAGCCAATCCCATAAAGCCGGTCGTAGTCCGGATCGCAGTCTGCAAC
+TCGACTGCGTGAAGTCGGAATCGCTAGTAATCGTGGATCAGCATGTCACG
+GTGAATACGTTCCCGGGTCTTGTACACACCGCCCGTCACACCATGGGAGC
+GGGTTCTGCCAGAAGTGGTTAGCCTAACCGTAAGGAGGGCGATCACCACG
+GCAGGGTTCGTGACTGGGGTGAAGTCGTAACAAGGTAACCA
+>EU543497.1
+AGGGTTTGATCATGGCTCAGATTGAACGCTGGCGGGATGCTTTACACATGCAAGTCGAACGGCAGCATAG
+AGAGCTTGCTCTCTGATGGCGAGTGGCGAACGGGTGAGTAATATATCGGAACGTGCCCAGTAATGGGGAA
+TAACTAGCCGAAAGGTTAGCTAATACCGCATACGACCTACGGGTGAAAGCAGGGGATCTTAGGACCTTGC
+GTTATTGGAGCGGCCGATATCTGATTAGCTTGTTGGTGGGGTAAAAGCCTACCAAGGCAACGATCAGTAG
+CTGGTCTGAGAGGACGATCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTG
+GGGAATTTTGGACAATGGGGGAAACCCTGATCCAGCCATCCCGCGTGAGTGAAGAAGGCCTTCGGGTTGT
+AAAGCTCTTTCGAAAGTGAAGAAAACTTATTTCGTAATATGTTATAAGTATGACGGTAACTTTAGAAGAA
+GCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGC
+GTAAAGCGTGCGCAGGCGGTTTTGTAAGTCAGATGTGAAATCCCCGAGCTTAACTTGGGAACTGCGTTTG
+AAACTACAAGACTAGAGTGTGTCAGAGGGGGGTAGAATTCCACGTGTAGCAGTGAAATGCGTAGAGATGT
+GGAGGAATACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGC
+GAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCAACTAGTTGTTGGTGGAGTAAGATCC
+ATGAGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAGTACGGTCGCAAGATTAAAACTCAAAGGA
+ATTGACGGGGGCCCGCACAAGCGGTGGATTATGTGGATTAATTCGATGCAACGCGAAAAACCTTACCTGG
+CCTTGACATGTACCGAATTTAGCAGAGATGCTTTAGTGCTCGTAAGAGAACGGTAACACAGGTGCTGCAT
+GGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGCCATTAATT
+GCCATCATTTAGTTGGGCACTTTAATGGGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAA
+GTCCTCATGGCCCTTATGGCCAGGGCTTCACACGTAATACAATGGTCGGTACAGAGGGCTGCTAACCCGC
+GAGGGGGTGCTAATCTCAGAAAACCGATCGTAGTCCGGATTGTTGTCTGCAACTCGACAGCATGAAGTCG
+GAATCGCTAGTAATCGCGGATCAGAATGTCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTC
+ACACCATGGGAGTGGGTTTTACCAGAAGTAGTTAGTCTGACCGTAAGGGGGACGATTACCACGGTAGGAT
+TCATGACTGGGGTGAAGTCGTAACAAGGTAACC
+>FJ203662.1
+GATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAGCGGAAACGGCAACATTGACTCTTCGGATGA
+TTTGTTGGACGTCGAGCGGCGGACGGGTGAGTAATGCTTAGGAATTTGCCCAGTCGAGGGGGATAACTAT
+TGGAAACGATAGCTAATACCGCATACGCCCTACGGGGGAAAAGAGGGGACCTTCGGGCCTTCTGCGATTG
+GATAAGCCTAAGTGAGATTAGCTAGTTGGTGAGGTAATGGCTCACCAAGGCGACGATCTCTAGCTGGTCT
+GAGAGGATGATCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATA
+TTGCACAATGGGCGCAAGCCTGATGCAGCCATGCCGCGTGTGTGAAGAAGGCCTTCGGGTTGTAAAGCAC
+TTTCAGCAGTGAGGAAGGTGGTAGTGTTAATAGCACTATCATTTGACGTTAGCTGCAGAAGAAGCACCGG
+CTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGC
+GCATGCAGGTGGTTTGTTAAGTCAGATGTGAAAGCCCTGGGCTCAACCCGGGAAGGTCATTTGAAACTGG
+CAAGCTAGAGTACTGTAGAGGGGGGTAGAATTTCAGGTGCAGCGGTGAAATGCGTAGAGATCTGAAGGAA
+TACCGGTGGCGAAAGGCGGCCCCCTGGACAGATACTGACACTCAGATGCGAAAGCGTGGGGAGCAAACAG
+GATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCTACTTGGAGGTTGTTCCCTTGAGGAGTGGCTT
+TCGGAGCTAACGCGTTAAGTAGACCGCCTGGGGAGTACGGTCGCAAGATTAAAACTCAAATGAATTGACG
+GGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTACTCTTGAC
+ATCCAGAGAATTTTCCAGAGATGGATTAGTGCCTTCGGGAACTCTGAGACAGGTGCTGCATGGCTGTCGT
+CAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTAATCCTTGATTGCCAGCACT
+TCGGGTGGGAACTTCAGGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGACGACGTCAAGTCATCAT
+GGCCCTTACGAGTAGGGCTACACACGTGCTACAATGGCGTATACAGAGGGCGGCGAACTCGCGAGAGTAA
+GCGAACCCCAAAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGGAGTCGGAATCGCT
+AGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATG
+GGAGTGGGCTGCAAAAGAAGTAGGTAGTTTAACCTTCGGGGGGTCCCTTACCACTTTGTGGTTCATGACT
+GGGGT
+>FJ203641.1
+GGATGAACGCTGGCGGTATGCTTAACACATGCAAGTTGAACGAAGGTTTTACCTTAGTGGCGGACGGGTG
+AGTAATACGTGAGAATCTACCTTTAGGAGGGGAATAACAGCTGGAAACGACTGCTAATGCCCCATATGCT
+TTATAGTGAAATGAATTTCGCCTGAAGATGAGCTCGCGCCTGATTAGCTTGTTGGTGGGGTAATGGCCTA
+CCAAGGCAACGATCAGTAGCTGATTTGAGAGGATGATCAGCCACACTGGAACTGAGACACGGTCCAGACT
+TCTACGGAAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGCAAGCCTGACGGAGCAATACCGCGTGAGGG
+ATGAATGCCTATGGGTTGTAAACCTCTTTTATTAGGGAAGAATTTTGACGGTACCTAATGAATAAGCATC
+GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGGGGATGCAAGCGTTATCCGGAATTATTGGGCGTAAA
+GAGTCTGTAGGTTGCGCTATAAGTCTACTGTTAAATATTAGAGCTCAACTTTAAACAAGCAGTAGAAACT
+ATTGTGCTTGAGTATGGTAGGGGTAAAGGGAATTCCCAGTGTAGCGGTGAAATGCGTAGATATTGGGAAG
+AACACCAGAAGCGAAAGCGCTTTACTGGGCCATTGCTGACACTGAGGGACGAAAGCTAGGGGAGCGAATG
+GGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGATGTTGTGCGTATCGATCCGTGCAG
+TATCGTAGCTAACGCGTTAAGTATCCCGCCTGGGAAGTACGCTCGCAAGAGTGAAACTCAAAGGAATTGA
+CGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACACGAAGAACCTTACCAGAACTCG
+ACATGTCGCAAATTTTTGTGAAAGCGAAAAGTGCCTTCGGGAATGCGAACACAGGTGGTGCATGGCTGTC
+GTCAGCTCGTGTCGTGAGATGCTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCTTTATTTGCCATCA
+TTGAGTTGGGTACTTTAAAGAGACTGCCGGTGACAAACCGGAGGAAGGTGAGGATGACGTCAAGTCAGCA
+TGCCCCTTACGTTCTGGGCTACACACGTGCTACAATGGTTATGACAAAAAGTTGCAAGTCTGTGAAGACA
+AGCTAATCTATAAACATAGCCTCAGTTCGGATTGTAGGCTGAAACTCGCCTACATGAAGGTGGAATCGCT
+AGTAATCGCCGGTCAGCTATACGGCGGTGAATCCGTTCCCGGGCCTTGTACACACCGCCCGTCACACCAT
+GGGAGCTGGCCATGCCCAAAGCTGTTACCTTAACTTTATTTAAGAGAGGTTCATCTAAGGTGGGGCTAGT
+GACTGGGGT
+>FJ203629.1
+ATGAACGCTAGCGGCAGGCCTCATACATGCAAGTCGAGGGGCAGCAGGACACTTCGGTGTTGCTGGCGAC
+CGGCGCACGGGTGCGTAACACGTATGCAATCTGCCTTGCACTGGAGCATAGCCCTCGGAAACGAAGATTA
+ATACTCCATACAGTCTTACTAGCGCATGCTAGTAAGATGAAAGCTCCGGCGGTACAAGATGAGCATGCAT
+CCCATTAGCTTGTTGGTGAGATAACAGCTCACCAAGGCTACGATGGGTAGGGGTTCTGAGAGGAAGATCC
+CCCACACTGGCACTGAGATACGGGCCAGACTCCTACGGGAGGCAGCAGTAGGGAATATTGGTCAATGGGC
+GCAAGCCTGAACCAGCCATGCCGCGTGCAGGATGAAGGCCTTCAGGGTTGTAAACTGCTTTTGTATGGGA
+ATAAAAAAGTCCTTGCGAGGACTCTTGAAGGTACCATAAGAATAAGCACCGGCTAACTCCGTGCCAGCAG
+CCGCGGTAATACGGAGGGTGCAGGCGTTATCCGGATTTACTGGGTTTAAAGAGTGCGTAGGCGGCTTCTT
+AAGTCAGTGGTGAAAGCTTAGCGCTTAACGCTAGAAGTGCCACTGATACTGGGAAGCTTGAGTCAAGAAG
+AGGTAAGCAGAATTCATAGTGTAGCAGTGAAATGCTTAGATACTATGAGGAATACCAACAGCGAAGGCAG
+CTTACTGGTCTTGTACTGACGTTGAGGCACGAAAGCGTGGGTAGCGAACAGGATTAGATACCCTGGTAGT
+CCACGCCGTAAACGATGATCACTCGATGTACACGCTAGTCGTGTGTGTCTAAGCAAAAGCATTAAGTGAT
+CCACCTGGGGAGTACGCTCGCAAGAGTGAAACTCAAAGGAATTGACGGGAGTCCGCACAAGCGGTGGAGC
+ATGTGGTTTAATTCGATAATACGCGAGGAACCTTACCTGGGCTCGAATGTCTCTGCTACCTCGAGAAATC
+GAGGGTTCCTTCGGGACAGAGTACAAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGT
+TAAGTCCTATAACGAGCGCAACCCCTTTACTTAGTTGCCAGCACATCATGGTGGGAACTCTAAGTAGACT
+GCCTGCGTAAGTAGGAGGAAGGAGGGGACGAGGTCAAGTCATCATGGCCCTTACGCCCAGGGCTACACAC
+GTGCTACAATGGCGTGTACAGAAGGACGCTACTTGGTAACAAGCGGCAAATCCTCAAAGCACGTCTCAGT
+TCGGATTGAGGTCTGCAACTCGACCTCATGAAGCTGGAATCGCTAGTAATCGCGCATCAGCAATGGCGCG
+GTGAATACGTTCCCGGACTTTGTACACACCGCCCGTCAAGCCATGGGAGTTGGTAGGACCTAAAGACAGT
+GGCCAATTAAGGAGCTGTTAAGGGTTAGATCAGCGACTGGGGCTA
+
+
\ No newline at end of file
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test_sina_references.loc	Wed Oct 23 18:28:17 2019 -0400
@@ -0,0 +1,1 @@
+testarb	testarb	${__HERE__}/reference.arb
\ No newline at end of file
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_data_table_conf.xml.sample	Wed Oct 23 18:28:17 2019 -0400
@@ -0,0 +1,7 @@
+<?xml version="1.0"?>
+<tables>
+    <table name="sina_references" comment_char="#" allow_duplicate_entries="false">
+        <columns>value, name, path</columns>
+        <file path="tool-data/sina_references.loc.sample"/>
+    </table>
+</tables>
\ No newline at end of file
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_data_table_conf.xml.test	Wed Oct 23 18:28:17 2019 -0400
@@ -0,0 +1,7 @@
+<?xml version="1.0"?>
+<tables>
+    <table name="sina_references" comment_char="#">
+        <columns>value, name, path</columns>
+        <file path="${__HERE__}/test-data/test_sina_references.loc" />
+    </table>
+</tables>