Mercurial > repos > iuc > sra_tools

changeset 34:e407b9da183a draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sra-tools commit 656986ea053baebf194b5311715d7d50a1ac0991
author iuc
date Fri, 17 Nov 2023 10:28:20 +0000
parents 6591f049cf7e
children de0f7e0a3896
files macros.xml
diffstat 1 files changed, 6 insertions(+), 6 deletions(-) [+]
line wrap: on
line diff
--- a/macros.xml	Wed Oct 25 20:02:46 2023 +0000
+++ b/macros.xml	Fri Nov 17 10:28:20 2023 +0000
@@ -1,6 +1,6 @@
 <macros>
     <token name="@TOOL_VERSION@">3.0.8</token>
-    <token name="@VERSION_SUFFIX@">0</token>
+    <token name="@VERSION_SUFFIX@">1</token>
     <token name="@PROFILE@">22.01</token>
     <xml name="edam_ontology">
         <edam_topics>
@@ -36,11 +36,6 @@
     <token name="@COPY_CONFIGFILE@"><![CDATA[
         mkdir -p ~/.ncbi &&
         cp '$user_settings_mkfg' ~/.ncbi/user-settings.mkfg &&
-        vdb-config -s "/repository/user/main/public/root=\$PWD" &&
-        vdb-config -s "/repository/user/ad/public/root=\$PWD" &&
-        vdb-config -s "/repository/user/default-path=\$PWD" &&
-        vdb-config -s "/repository/user/main/public/root=\$PWD" &&
-        vdb-config -s /http/timeout/read=10000 &&
     ]]></token>
     <token name="@SET_ACCESSIONS@"><![CDATA[
         #if $input.input_select == "sra_file":
@@ -69,6 +64,11 @@
 /config/default = "false"
 /libs/temp_cache = "."
 /tools/prefetch/download_to_cache = "false"
+/http/timeout/read = "1000"
+/repository/user/main/public/root = "."
+/repository/user/ad/public/root = "."
+/repository/user/default-path = "."
+/repository/user/main/public/root = "."
             ]]></configfile>
         </configfiles>
     </macro>