Mercurial > repos > iuc > staramr

changeset 2:d0a2e0a9c853 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/staramr commit 9688e265b7b8407c3732b96318b56b2482a9cd98
author iuc
date Thu, 27 Feb 2025 16:29:20 +0000
parents 9e8cf8dd6955
children 59d308975e63
files staramr_search.xml
diffstat 1 files changed, 3 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/staramr_search.xml	Mon Feb 10 19:23:20 2025 +0000
+++ b/staramr_search.xml	Thu Feb 27 16:29:20 2025 +0000
@@ -2,7 +2,7 @@
     <description>Scans genome assemblies against the ResFinder, PlasmidFinder, and PointFinder databases searching for AMR genes</description>
     <macros>
         <token name="@TOOL_VERSION@">0.11.0</token>
-        <token name="@VERSION_SUFFIX@">0</token>
+        <token name="@VERSION_SUFFIX@">1</token>
         <token name="@PROFILE@">22.05</token>
         <xml name="element_assert" token_name="" token_text="">
             <element name="@NAME@">
@@ -98,9 +98,9 @@
     --pointfinder-organism '${pointfinder_organism}'
 #end if
 
-$named_genomes &&
+$named_genomes
 #if str($hide_db_build) == 'true':
-    rm -r resfinder_d1e607b_pointfinder_694919f_plasmidfinder_3e77502
+    && rm -r resfinder_d1e607b_pointfinder_694919f_plasmidfinder_3e77502
 #end if
     ]]></command>
     <inputs>