Mercurial > repos > iuc > suite_bcftools

changeset 23:189e841b9cb7 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/bcftools commit f6efda26965eb73c9107d367fd5ffdf246ed0dbc
author iuc
date Tue, 02 Dec 2025 08:27:30 +0000
parents c004f4adc852
children
files repository_dependencies.xml
diffstat 1 files changed, 33 insertions(+), 33 deletions(-) [+]
line wrap: on
line diff
--- a/repository_dependencies.xml	Sun Aug 18 10:23:14 2024 +0000
+++ b/repository_dependencies.xml	Tue Dec 02 08:27:30 2025 +0000
@@ -1,36 +1,36 @@
 <?xml version="1.0" ?>
 <repositories description="A suite of Galaxy tools designed to work with version 1.9 of the bcftools package.">
-    <repository owner="iuc" name="bcftools_norm" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="271965b55437"/>
-    <repository owner="iuc" name="bcftools_annotate" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="2c372041ed8c"/>
-    <repository owner="iuc" name="bcftools_csq" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="d237eaef451f"/>
-    <repository owner="iuc" name="bcftools_plugin_fill_an_ac" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="a12844ca467a"/>
-    <repository owner="iuc" name="bcftools_mpileup" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="0a5dcc9a8ec2"/>
-    <repository owner="iuc" name="bcftools_gtcheck" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="7b4454382d39"/>
-    <repository owner="iuc" name="bcftools_query" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="31a1b89eab9b"/>
-    <repository owner="iuc" name="bcftools_plugin_split_vep" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="7b71281eb0ca"/>
-    <repository owner="iuc" name="bcftools_isec" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="39bca000353d"/>
-    <repository owner="iuc" name="bcftools_plugin_mendelian" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="8f5962c43868"/>
-    <repository owner="iuc" name="bcftools_plugin_color_chrs" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="7d9166ecd10f"/>
-    <repository owner="iuc" name="bcftools_cnv" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="ccb83bf54de0"/>
-    <repository owner="iuc" name="bcftools_plugin_tag2tag" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="3897eaadfbff"/>
-    <repository owner="iuc" name="bcftools_convert_to_vcf" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="cfd81f17580b"/>
-    <repository owner="iuc" name="bcftools_query_list_samples" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="2c80b0d6bde0"/>
-    <repository owner="iuc" name="bcftools_merge" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="5b006286a458"/>
-    <repository owner="iuc" name="bcftools_convert_from_vcf" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="012656fd329f"/>
-    <repository owner="iuc" name="bcftools_reheader" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="2331ddcbd5aa"/>
-    <repository owner="iuc" name="bcftools_plugin_impute_info" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="bc5332d47b1c"/>
-    <repository owner="iuc" name="bcftools_plugin_counts" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="dadbd61dc4cf"/>
-    <repository owner="iuc" name="bcftools_plugin_frameshifts" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="b03c0b3e67a6"/>
-    <repository owner="iuc" name="bcftools_stats" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="591cc8518033"/>
-    <repository owner="iuc" name="bcftools_plugin_setgt" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="a730269af659"/>
-    <repository owner="iuc" name="bcftools_plugin_fixploidy" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="dd72ff87cfd0"/>
-    <repository owner="iuc" name="bcftools_concat" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="05f317e50e61"/>
-    <repository owner="iuc" name="bcftools_plugin_fill_tags" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="b10d1510fa84"/>
-    <repository owner="iuc" name="bcftools_view" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="1a2ef636f48e"/>
-    <repository owner="iuc" name="bcftools_plugin_dosage" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="283911fe7e1a"/>
-    <repository owner="iuc" name="bcftools_filter" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="46fcafba49ec"/>
-    <repository owner="iuc" name="bcftools_call" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="07396b423218"/>
-    <repository owner="iuc" name="bcftools_roh" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="fa65af07ce7d"/>
-    <repository owner="iuc" name="bcftools_plugin_missing2ref" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="8b260d252ff4"/>
-    <repository owner="iuc" name="bcftools_consensus" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="8aa352093d73"/>
+    <repository owner="iuc" name="bcftools_call" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="c277260d3fab"/>
+    <repository owner="iuc" name="bcftools_plugin_missing2ref" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="793ae03deb13"/>
+    <repository owner="iuc" name="bcftools_merge" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="d3286f971e89"/>
+    <repository owner="iuc" name="bcftools_query" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="1dc6f1ac7f32"/>
+    <repository owner="iuc" name="bcftools_convert_from_vcf" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="a20d6492132d"/>
+    <repository owner="iuc" name="bcftools_plugin_tag2tag" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="9268b0ad92af"/>
+    <repository owner="iuc" name="bcftools_plugin_setgt" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="394dbf428c7b"/>
+    <repository owner="iuc" name="bcftools_plugin_counts" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="ade0d3c3ec1c"/>
+    <repository owner="iuc" name="bcftools_gtcheck" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="68d04cd5d35a"/>
+    <repository owner="iuc" name="bcftools_isec" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="3d21f507fc5d"/>
+    <repository owner="iuc" name="bcftools_plugin_fill_tags" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="fea209b23f19"/>
+    <repository owner="iuc" name="bcftools_plugin_frameshifts" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="3c6952a2b0e4"/>
+    <repository owner="iuc" name="bcftools_plugin_color_chrs" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="845a7025ba81"/>
+    <repository owner="iuc" name="bcftools_csq" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="9f69e7d58d03"/>
+    <repository owner="iuc" name="bcftools_concat" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="c3c930926708"/>
+    <repository owner="iuc" name="bcftools_plugin_mendelian" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="eed37e76acd1"/>
+    <repository owner="iuc" name="bcftools_view" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="2a7d7ee53975"/>
+    <repository owner="iuc" name="bcftools_plugin_fill_an_ac" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="69ad30be1a8b"/>
+    <repository owner="iuc" name="bcftools_cnv" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="61dfbc82ffc8"/>
+    <repository owner="iuc" name="bcftools_roh" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="acfd6984d130"/>
+    <repository owner="iuc" name="bcftools_plugin_fixploidy" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="f203ea355bc8"/>
+    <repository owner="iuc" name="bcftools_annotate" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="06eaadeffb7d"/>
+    <repository owner="iuc" name="bcftools_norm" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="5fa262ce95dd"/>
+    <repository owner="iuc" name="bcftools_filter" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="3502f0e1f0e4"/>
+    <repository owner="iuc" name="bcftools_plugin_dosage" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="0c50683a9c94"/>
+    <repository owner="iuc" name="bcftools_consensus" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="9a260f6fab93"/>
+    <repository owner="iuc" name="bcftools_reheader" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="a0b1c0bdfa5a"/>
+    <repository owner="iuc" name="bcftools_convert_to_vcf" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="68736d355615"/>
+    <repository owner="iuc" name="bcftools_query_list_samples" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="fb631fd605e8"/>
+    <repository owner="iuc" name="bcftools_mpileup" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="43f0efd586c4"/>
+    <repository owner="iuc" name="bcftools_plugin_impute_info" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="42345cc2c76e"/>
+    <repository owner="iuc" name="bcftools_plugin_split_vep" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="66682ee970c6"/>
+    <repository owner="iuc" name="bcftools_stats" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="fcf941c241cc"/>
 </repositories>
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