Mercurial > repos > iuc > suite_bcftools_1_3

changeset 5:b82632f0e1fe draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 9d03fe38504a35d11660dadb44cb1beee32fcf4e
author iuc
date Thu, 13 Apr 2017 17:48:12 -0400
parents 95f75ff4dbbc
children da5f64745d44
files repository_dependencies.xml
diffstat 1 files changed, 30 insertions(+), 29 deletions(-) [+]
line wrap: on
line diff
--- a/repository_dependencies.xml	Sat Mar 11 18:06:11 2017 -0500
+++ b/repository_dependencies.xml	Thu Apr 13 17:48:12 2017 -0400
@@ -1,33 +1,34 @@
 <?xml version="1.0"?>
-<repositories description="A suite of Galaxy tools designed to work with version 1.3 of the bcftools package.">  <repository changeset_revision="7b10a015526e" name="bcftools_annotate" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="0a564427739d" name="bcftools_call" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="801a440c28cc" name="bcftools_cnv" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="3b318cfab085" name="bcftools_concat" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="5410e1408bce" name="bcftools_consensus" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="8714c1caa3ee" name="bcftools_convert_from_vcf" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="19167fd970a3" name="bcftools_convert_to_vcf" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="f06ccd8eb3f6" name="bcftools_filter" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="d8c55ac67d89" name="bcftools_gtcheck" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="71747e4a4aa1" name="bcftools_isec" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="df40d7f9737c" name="bcftools_merge" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="660f8eec689d" name="bcftools_norm" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+<repositories description="A suite of Galaxy tools designed to work with version 1.3 of the bcftools package.">  <repository changeset_revision="741a08398a04" name="bcftools_view" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="12f7c5315f7f" name="bcftools_mpileup" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="7b50ab23976c" name="bcftools_convert_to_vcf" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="f0747a281247" name="bcftools_plugin_mendelian" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="45091d60320f" name="bcftools_roh" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
   <repository changeset_revision="71186bb66ca2" name="bcftools_plugin_color_chrs" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="902fd5bfb7f6" name="bcftools_plugin_counts" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="1a946c8cbbf1" name="bcftools_plugin_dosage" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="0124b2fa5f59" name="bcftools_plugin_fill_an_ac" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="b365f9164cdf" name="bcftools_plugin_fill_tags" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="b7dc6f8084ce" name="bcftools_plugin_fixploidy" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="cfd95c205d55" name="bcftools_filter" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="114d43c4a41f" name="bcftools_plugin_tag2tag" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="e49eeb4059e0" name="bcftools_norm" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="3296c3680d96" name="bcftools_call" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="3afcc6474c79" name="bcftools_stats" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="e703028148e2" name="bcftools_plugin_dosage" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="9d243d49870f" name="bcftools_gtcheck" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
   <repository changeset_revision="96d2000977ab" name="bcftools_plugin_frameshifts" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="c6071203aaa0" name="bcftools_plugin_impute_info" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="31f2ab4d1cac" name="bcftools_plugin_mendelian" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="64b2f65980ea" name="bcftools_plugin_missing2ref" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="03e354151925" name="bcftools_plugin_setgt" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="09533c5972fb" name="bcftools_plugin_tag2tag" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="cef5eb208e29" name="bcftools_plugin_vcf2sex" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="5476360ed9db" name="bcftools_query" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="5272100dd270" name="bcftools_query_list_samples" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="4e8e8fa7f39e" name="bcftools_reheader" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="33454033cdf6" name="bcftools_roh" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="5129a2b2f316" name="bcftools_stats" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="993ed534cc38" name="bcftools_view" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="2c5a7bd98c81" name="bcftools_convert_from_vcf" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="40174941cbda" name="bcftools_concat" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="eb782a60fc53" name="bcftools_annotate" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="062bd8cf085e" name="bcftools_cnv" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="24ff7b989329" name="bcftools_query" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="d87ee398707f" name="bcftools_plugin_fill_tags" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="aec8cc772e0c" name="bcftools_plugin_fixploidy" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="a15210afaf1d" name="bcftools_plugin_impute_info" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="cfc3a6940b18" name="bcftools_isec" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="858a3580dc70" name="bcftools_consensus" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="17e1e452297b" name="bcftools_plugin_missing2ref" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="5bae20e2d7c8" name="bcftools_plugin_counts" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="53a667173f9c" name="bcftools_query_list_samples" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="e587eb7d99a3" name="bcftools_reheader" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="2a6c13f8cc5a" name="bcftools_csq" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="39d2fa47f557" name="bcftools_plugin_setgt" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="c5c61f2f8757" name="bcftools_merge" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="8e1fbf8baef9" name="bcftools_plugin_fill_an_ac" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
 </repositories>