Mercurial > repos > iuc > taxonomy_filter_refseq
comparison test-data/sample_refseq.fasta @ 0:28e95c6a944d draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc commit 665d364fb51576608b0eb66a4f89d92159925ccc
| author | iuc |
|---|---|
| date | Wed, 16 Jan 2019 08:30:47 -0500 |
| parents | |
| children | d9662c76b6d5 |
comparison
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| -1:000000000000 | 0:28e95c6a944d |
|---|---|
| 1 >YP_009026408.1 Coat Protein [Arhar cryptic virus-II] | |
| 2 MNQGDRVPPHADTPSAPVETPPPIQGPTTNDLSRATEFLVKSTRLCWLQTNHEKYRSYVTLNRNELYSTLVELYTHFFAS | |
| 3 EWTTLRRYVEPYTTETIAHQQRFAARNYISGWFIDLYVSNREAVKKLTPLAYNEYYSTDKARHHPEYDNFLTLLSSAIRP | |
| 4 THIMDTPEDTLYIPLIRRQRQLGTENNPFNITDFVYSYPFVCGLIQTLQARKCWKRSPLSDNTMGRATWLFDWHGDKMVA | |
| 5 PFPATGNYTKDDVTMAYILGVPCTPLIGCVDVDDWQFIPPNVDINTVNPNTLVRIDDPRFPGAYSVRVIETQEEYYLPIS | |
| 6 SEGAMEIASRLGRPQRPSKKRKTASASTSKDPTTPASSTMVEYSDDPVDFNAPGSVSKIIVITDYLFCR | |
| 7 >YP_009137150.1 neurovirulence protein ICP34.5 [Human alphaherpesvirus 2] | |
| 8 MSRRRGPRRRGPRRRPRPGAPAVPRPGAPAVPRPGALPTADSQMVPAYDSGTAVESAPAASSLLRRWLLVPQADDSDDAD | |
| 9 YAGNDDAEWANSPPSEGGGKAPEAPHAAPAAACPPPPPRKERGPQRPLPPHLALRLRTTTEYLARLSLRRRRPPASPPAD | |
| 10 APRGKVCFSPRVQVRHLVAWETAARLARRGSWARERADRDRFRRRVAAAEAVIGPCLEPEARARARARARAHEDGGPAEE | |
| 11 EEAAAAARGSSAAAGPGRRAV | |
| 12 >YP_009137151.1 ubiquitin E3 ligase ICP0 [Human alphaherpesvirus 2] | |
| 13 MEPRPGTSSRADPGPERPPRQTPGTQPAAPHAWGMLNDMQWLASSDSEEETEVGISDDDLHRDSTSEAGSTDTEMFEAGL | |
| 14 MDAATPPARPPAERQGSPTPADAQGSCGGGPVGEEEAEAGGGGDVCAVCTDEIAPPLRCQSFPCLHPFCIPCMKTWIPLR | |
| 15 NTCPLCNTPVAYLIVGVTASGSFSTIPIVNDPRTRVEAEAAVRAGTAVDFIWTGNQRTAPRSLSLGGHTVRALSPTPPWP | |
| 16 GTDDEDDDLADVDYVPPAPRRAPRRGGGGAGATRGTSQPAATRPAPPGAPRSSSSGGAPLRAGVGSGSGGGPAVAAVVPR | |
| 17 VASLPPAAGGGRAQARRVGEDAAAAEGRTPPAGQPRAAQEPPIVISDSPPPSPRRPAGPGPLSFFSSSSAQVSSGPGGGG | |
| 18 LPQSSGRAARPRAAVAPRVRSPPRAAAAPVVSASADAAGPAPPAVPVDAHRAPRSRMTQAQTDTQAQSLGRAGATDARGS | |
| 19 GGPGAEGGPGVPRGTNTPGAAPHAAEGAAARPRKRRGSDSGPAASSSASSSAAPRSPLAPQGVGAKRAAPRRAPDSDSGD | |
| 20 RGHGPLAPASAGAAPPSASPSSQAAVAAAASSSSSAASSSSSAASSSSSAASSSSSAASSSSAASSSSSSSSASSSAGGA | |
| 21 GGSVASASGAGERRETSLGPRAAAPRGPRKCARKTRHAEGGPEPGARDPAPGLTRYLPIAGVSSVVALAPYVNKTVTGDC | |
| 22 LPVLDMETGHIGAYVVLVDQTGNVADLLRAAAPAWSRRTLLPEHARNCVRPPDYPTPPASEWNSLWMTPVGNMLFDQGTL | |
| 23 VGALDFHGLRSRHPWSREQGAPAPAGDAPAGHGE | |
| 24 >YP_009137152.1 envelope glycoprotein L [Human alphaherpesvirus 2] | |
| 25 MGFVCLFGLVVMGAWGAWGGSQATEYVLRSVIAKEVGDILRVPCMRTPADDVSWRYEAPSVIDYARIDGIFLRYHCPGLD | |
| 26 TFLWDRHAQRAYLVNPFLFAAGFLEDLSHSVFPADTQETTTRRALYKEIRDALGSRKQAVSHAPVRAGCVNFDYSRTRRC | |
| 27 VGRRDLRPANTTSTWEPPVSSDDEASSQSKPLATQPPVLALSNAPPRRVSPTRGRRRHTRLRRN | |
| 28 >YP_009173773.1 putative ATP-dependent DNA helicase [Mycoplasma phage phiMFV1] | |
| 29 MNKMPWESEEVEYKKSTSELKEAIISLTAMLNKKGTGTVYFGVKDDRTVVGLEIGNKTMRDISQAISNNVKPEIMPRISI | |
| 30 EFIDNQNVIKVEAEGEQKPYSAYDKYYIRIGEEDKKLNRDKLVDFVQKSVSKINICEIENKDQDLTFNSFLLYANIKNLT | |
| 31 VNKDTFEKNFDLKTKNNKYNLMSYLLADNNDISIKVNTFKDNDKSVLLKRNEYGNKCLFYAIESVLNYVGSINDTYVDLS | |
| 32 TATRSEQKLFNFECFREAWLNACIHNRWDEKYPPQVNIFKDYIQIESNGGIPRNMTKEKFFKGVSRPVNEKLQKIFMQLD | |
| 33 LVEQTGHGVPLIVKKYGEEAFEIDENTIWVKIPFNRKGFKRINEKENKNNLNDNQIKVIKTIEKESNITINQLSSTLSLS | |
| 34 EGYIKKIINQLKNKNLIERNGLRKNGNWTIISYNL | |
| 35 >YP_044791.1 RepB [Mycoplasma phage phiMFV1] | |
| 36 MLLTTKQLQEFYKIEMENIAKNKSLLTNFNIIDNYANGLKPKQLYFLAARPGVGKTSFALNIIFNALENLKEDECIVLFS | |
| 37 LEMDSIEIYSKLLALANSCSLKEVETNSKKIDFEDLNKKNLFIFDRYRNNFNNEKLSEVTPDIIYKSLNSIGLKIKAVFI | |
| 38 DYFQLLDNQKYSSEREKLSQCSKQLKELSKIFNCNFFVLSQLSREYEKKTNNEPSFSDLKGTGSIEQDADLIMFLYNSSN | |
| 39 NFNVGTLIPNKKTILNLSIAKNRNGELVKTNIDFIPHLAKFIES | |
| 40 >YP_044792.1 hypothetical protein [Mycoplasma phage phiMFV1] | |
| 41 MLNNKCDFCHKRFQPKKERYFWGNLVVCSEECLEQVSCYASEIDLNCEGENNE | |
| 42 >YP_044793.1 hypothetical protein [Mycoplasma phage phiMFV1] | |
| 43 MNKEKLIKFLIDLTEKENTKLKSDVKILKSKLKKIKKEYEEQEKAFDDLLKKL | |
| 44 >YP_044794.1 hypothetical protein [Mycoplasma phage phiMFV1] | |
| 45 MDIFKKMEIAEKDKIEKLLLNIDKFIWDCNSKGWTKSKNKKVISLYKKTLEEIKKNEKYDWLYVPIKSQIYKFADHDLKS | |
| 46 DIFLWFSHTKILCGYTYLKDKWNF | |
| 47 >YP_044795.1 MarRP [Mycoplasma phage phiMFV1] | |
| 48 MKFLKEPPVFTEEQFKELVHYTDLEDNPTFEAYKSNAFFKIYSGAKGVSKSFSRMIETVYRLVNEKNFNSFWCRNQYNHI | |
| 49 KGTLKPLLEKVLSFLAAKGLDYRPYISIYNTEAYWDYDDGGKGRAIFFGNWKNVQSFQGVTLSQKDFAWGELVIDEPIEK | |
| 50 ELTEELEEIYKIQASNLEILIANTVLRSKNIEGFKTNVTFLYNIFTIDHFLIKDFHNPILPLYSGTDFLKKINLNLAKEL | |
| 51 IENTYLQKEDLAFKEGMGIIVTMFSKYFVPKNELSDLQLKQFEALKTKDYKLWMITVAGFAFEEPPERYDYFMKSVLLNK | |
| 52 KGNWDRKKCKIINIKQLETKLENEEICGLFYGFDYGLTDNCALVVVLLLSGARIIVLDIFEDIKKLLPKNKRRENKAIYN | |
| 53 KVALIVKKWNEYFDKYNFKFYISWLLGNFDSFLYGDNVHSLQWMTEVFINNGINTKLLPASRFKGKKGFGIIDRQVWQKN | |
| 54 IFENGLVELLPKAKSLLTLLCQQVIDKEDPKNPNQRNERINKKIYDVINAFEMANTLQNCEYRNYLFNKELKEKNEQNNY |