view test-data/sample_refseq.fasta @ 0:28e95c6a944d draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc commit 665d364fb51576608b0eb66a4f89d92159925ccc
author iuc
date Wed, 16 Jan 2019 08:30:47 -0500
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children d9662c76b6d5
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>YP_009026408.1 Coat Protein [Arhar cryptic virus-II]
MNQGDRVPPHADTPSAPVETPPPIQGPTTNDLSRATEFLVKSTRLCWLQTNHEKYRSYVTLNRNELYSTLVELYTHFFAS
EWTTLRRYVEPYTTETIAHQQRFAARNYISGWFIDLYVSNREAVKKLTPLAYNEYYSTDKARHHPEYDNFLTLLSSAIRP
THIMDTPEDTLYIPLIRRQRQLGTENNPFNITDFVYSYPFVCGLIQTLQARKCWKRSPLSDNTMGRATWLFDWHGDKMVA
PFPATGNYTKDDVTMAYILGVPCTPLIGCVDVDDWQFIPPNVDINTVNPNTLVRIDDPRFPGAYSVRVIETQEEYYLPIS
SEGAMEIASRLGRPQRPSKKRKTASASTSKDPTTPASSTMVEYSDDPVDFNAPGSVSKIIVITDYLFCR
>YP_009137150.1 neurovirulence protein ICP34.5 [Human alphaherpesvirus 2]
MSRRRGPRRRGPRRRPRPGAPAVPRPGAPAVPRPGALPTADSQMVPAYDSGTAVESAPAASSLLRRWLLVPQADDSDDAD
YAGNDDAEWANSPPSEGGGKAPEAPHAAPAAACPPPPPRKERGPQRPLPPHLALRLRTTTEYLARLSLRRRRPPASPPAD
APRGKVCFSPRVQVRHLVAWETAARLARRGSWARERADRDRFRRRVAAAEAVIGPCLEPEARARARARARAHEDGGPAEE
EEAAAAARGSSAAAGPGRRAV
>YP_009137151.1 ubiquitin E3 ligase ICP0 [Human alphaherpesvirus 2]
MEPRPGTSSRADPGPERPPRQTPGTQPAAPHAWGMLNDMQWLASSDSEEETEVGISDDDLHRDSTSEAGSTDTEMFEAGL
MDAATPPARPPAERQGSPTPADAQGSCGGGPVGEEEAEAGGGGDVCAVCTDEIAPPLRCQSFPCLHPFCIPCMKTWIPLR
NTCPLCNTPVAYLIVGVTASGSFSTIPIVNDPRTRVEAEAAVRAGTAVDFIWTGNQRTAPRSLSLGGHTVRALSPTPPWP
GTDDEDDDLADVDYVPPAPRRAPRRGGGGAGATRGTSQPAATRPAPPGAPRSSSSGGAPLRAGVGSGSGGGPAVAAVVPR
VASLPPAAGGGRAQARRVGEDAAAAEGRTPPAGQPRAAQEPPIVISDSPPPSPRRPAGPGPLSFFSSSSAQVSSGPGGGG
LPQSSGRAARPRAAVAPRVRSPPRAAAAPVVSASADAAGPAPPAVPVDAHRAPRSRMTQAQTDTQAQSLGRAGATDARGS
GGPGAEGGPGVPRGTNTPGAAPHAAEGAAARPRKRRGSDSGPAASSSASSSAAPRSPLAPQGVGAKRAAPRRAPDSDSGD
RGHGPLAPASAGAAPPSASPSSQAAVAAAASSSSSAASSSSSAASSSSSAASSSSSAASSSSAASSSSSSSSASSSAGGA
GGSVASASGAGERRETSLGPRAAAPRGPRKCARKTRHAEGGPEPGARDPAPGLTRYLPIAGVSSVVALAPYVNKTVTGDC
LPVLDMETGHIGAYVVLVDQTGNVADLLRAAAPAWSRRTLLPEHARNCVRPPDYPTPPASEWNSLWMTPVGNMLFDQGTL
VGALDFHGLRSRHPWSREQGAPAPAGDAPAGHGE
>YP_009137152.1 envelope glycoprotein L [Human alphaherpesvirus 2]
MGFVCLFGLVVMGAWGAWGGSQATEYVLRSVIAKEVGDILRVPCMRTPADDVSWRYEAPSVIDYARIDGIFLRYHCPGLD
TFLWDRHAQRAYLVNPFLFAAGFLEDLSHSVFPADTQETTTRRALYKEIRDALGSRKQAVSHAPVRAGCVNFDYSRTRRC
VGRRDLRPANTTSTWEPPVSSDDEASSQSKPLATQPPVLALSNAPPRRVSPTRGRRRHTRLRRN
>YP_009173773.1 putative ATP-dependent DNA helicase [Mycoplasma phage phiMFV1]
MNKMPWESEEVEYKKSTSELKEAIISLTAMLNKKGTGTVYFGVKDDRTVVGLEIGNKTMRDISQAISNNVKPEIMPRISI
EFIDNQNVIKVEAEGEQKPYSAYDKYYIRIGEEDKKLNRDKLVDFVQKSVSKINICEIENKDQDLTFNSFLLYANIKNLT
VNKDTFEKNFDLKTKNNKYNLMSYLLADNNDISIKVNTFKDNDKSVLLKRNEYGNKCLFYAIESVLNYVGSINDTYVDLS
TATRSEQKLFNFECFREAWLNACIHNRWDEKYPPQVNIFKDYIQIESNGGIPRNMTKEKFFKGVSRPVNEKLQKIFMQLD
LVEQTGHGVPLIVKKYGEEAFEIDENTIWVKIPFNRKGFKRINEKENKNNLNDNQIKVIKTIEKESNITINQLSSTLSLS
EGYIKKIINQLKNKNLIERNGLRKNGNWTIISYNL
>YP_044791.1 RepB [Mycoplasma phage phiMFV1]
MLLTTKQLQEFYKIEMENIAKNKSLLTNFNIIDNYANGLKPKQLYFLAARPGVGKTSFALNIIFNALENLKEDECIVLFS
LEMDSIEIYSKLLALANSCSLKEVETNSKKIDFEDLNKKNLFIFDRYRNNFNNEKLSEVTPDIIYKSLNSIGLKIKAVFI
DYFQLLDNQKYSSEREKLSQCSKQLKELSKIFNCNFFVLSQLSREYEKKTNNEPSFSDLKGTGSIEQDADLIMFLYNSSN
NFNVGTLIPNKKTILNLSIAKNRNGELVKTNIDFIPHLAKFIES
>YP_044792.1 hypothetical protein [Mycoplasma phage phiMFV1]
MLNNKCDFCHKRFQPKKERYFWGNLVVCSEECLEQVSCYASEIDLNCEGENNE
>YP_044793.1 hypothetical protein [Mycoplasma phage phiMFV1]
MNKEKLIKFLIDLTEKENTKLKSDVKILKSKLKKIKKEYEEQEKAFDDLLKKL
>YP_044794.1 hypothetical protein [Mycoplasma phage phiMFV1]
MDIFKKMEIAEKDKIEKLLLNIDKFIWDCNSKGWTKSKNKKVISLYKKTLEEIKKNEKYDWLYVPIKSQIYKFADHDLKS
DIFLWFSHTKILCGYTYLKDKWNF
>YP_044795.1 MarRP [Mycoplasma phage phiMFV1]
MKFLKEPPVFTEEQFKELVHYTDLEDNPTFEAYKSNAFFKIYSGAKGVSKSFSRMIETVYRLVNEKNFNSFWCRNQYNHI
KGTLKPLLEKVLSFLAAKGLDYRPYISIYNTEAYWDYDDGGKGRAIFFGNWKNVQSFQGVTLSQKDFAWGELVIDEPIEK
ELTEELEEIYKIQASNLEILIANTVLRSKNIEGFKTNVTFLYNIFTIDHFLIKDFHNPILPLYSGTDFLKKINLNLAKEL
IENTYLQKEDLAFKEGMGIIVTMFSKYFVPKNELSDLQLKQFEALKTKDYKLWMITVAGFAFEEPPERYDYFMKSVLLNK
KGNWDRKKCKIINIKQLETKLENEEICGLFYGFDYGLTDNCALVVVLLLSGARIIVLDIFEDIKKLLPKNKRRENKAIYN
KVALIVKKWNEYFDKYNFKFYISWLLGNFDSFLYGDNVHSLQWMTEVFINNGINTKLLPASRFKGKKGFGIIDRQVWQKN
IFENGLVELLPKAKSLLTLLCQQVIDKEDPKNPNQRNERINKKIYDVINAFEMANTLQNCEYRNYLFNKELKEKNEQNNY