tooldistillator: test-data/quast/quast

annotate test-data/quast/quast_report.html @ 0:6e868bf6c38e draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2

author	iuc
date	Tue, 30 Apr 2024 08:42:33 +0000
parents
children

rev	line source
0 6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1 <!DOCTYPE html>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2 <html lang="en">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3 <head>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4 <meta http-equiv="Content-Type" content="text/html;charset=utf-8" >
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	5
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	6 <style rel="stylesheet">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	7 /*!
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	8 * Bootstrap v2.0.4
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	9 *
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	10 * Copyright 2012 Twitter, Inc
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	11 * Licensed under the Apache License v2.0
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	12 * http://www.apache.org/licenses/LICENSE-2.0
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	13 *
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	14 * Designed and built with all the love in the world @twitter by @mdo and @fat.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	15 */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	16 .clearfix{*zoom:1;}.clearfix:before,.clearfix:after{display:table;content:"";}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	17 .clearfix:after{clear:both;}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	18 .hide-text{font:0/0 a;color:transparent;text-shadow:none;background-color:transparent;border:0;}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	19 .input-block-level{display:block;width:100%;min-height:28px;-webkit-box-sizing:border-box;-moz-box-sizing:border-box;-ms-box-sizing:border-box;box-sizing:border-box;}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	20 .tooltip{position:absolute;z-index:1020;display:block;visibility:visible;padding:5px;font-size:11px;opacity:0;filter:alpha(opacity=0);}.tooltip.in{opacity:0.8;filter:alpha(opacity=80);}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	21 .tooltip.top{margin-top:-2px;}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	22 .tooltip.right{margin-left:2px;}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	23 .tooltip.bottom{margin-top:2px;}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	24 .tooltip.left{margin-left:-2px;}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	25 .tooltip.top .tooltip-arrow{bottom:0;left:50%;margin-left:-5px;border-left:5px solid transparent;border-right:5px solid transparent;border-top:5px solid #000000;}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	26 .tooltip.left .tooltip-arrow{top:50%;right:0;margin-top:-5px;border-top:5px solid transparent;border-bottom:5px solid transparent;border-left:5px solid #000000;}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	27 .tooltip.bottom .tooltip-arrow{top:0;left:50%;margin-left:-5px;border-left:5px solid transparent;border-right:5px solid transparent;border-bottom:5px solid #000000;}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	28 .tooltip.right .tooltip-arrow{top:50%;left:0;margin-top:-5px;border-top:5px solid transparent;border-bottom:5px solid transparent;border-right:5px solid #000000;}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	29 .tooltip-inner{max-width:200px;padding:3px 8px;color:#ffffff;text-align:center;text-decoration:none;background-color:#000000;-webkit-border-radius:4px;-moz-border-radius:4px;border-radius:4px;}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	30 .tooltip-arrow{position:absolute;width:0;height:0;}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	31
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	32 </style>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	33
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	34 <style rel="stylesheet">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	35 /* Main things */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	36 html, body, div, span, h1, h3, h4, h5, h6, blockquote, pre,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	37 em, sub, sup, dl, dt, dd, ol, ul, li,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	38 fieldset, form, label,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	39 table, caption, tbody, tfoot, thead,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	40 article, aside, canvas, details, figure, figcaption, footer, header, hgroup,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	41 menu, nav, output, section, time {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	42 margin: 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	43 padding: 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	44 border: 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	45 font-size: 100%;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	46 font: inherit;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	47 vertical-align: baseline;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	48 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	49 body {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	50 margin: 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	51 font-family: Lucida Grande, Verdana, Arial, sans-serif;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	52 font-size: 12px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	53 color: black;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	54 padding-bottom: 30px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	55 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	56 a {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	57 text-decoration: none;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	58 /color: #0c4f72;/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	59 color: #0077B5;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	60 border-bottom: 1px solid #487b95;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	61 border-color: #487b95; /* #487b95 */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	62 border-color: rgba(12, 79, 114, 0.2); /* #0c4f72; / / #a0d2eb; / /rgba(0, 88, cc, 0.3);*/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	63 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	64 a:visited {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	65 text-decoration: none;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	66 color: #8C66B2;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	67 border-bottom: 1px solid #8c66b2;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	68 border-color: #8c66b2;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	69 border-color: rgba(102, 51, 153, 0.2);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	70 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	71 a:hover {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	72 text-decoration: none;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	73 color: #b33; /* #0088cc; */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	74 border-bottom: 1px solid #ffcccc;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	75 border-color: #ffcccc;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	76 border-color: rgba(255, 0, 0, 0.2); /* #55b2e0; / /#005580;*/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	77 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	78 a.dark_bg_link {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	79 color: white; /* #0088cc; */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	80 border-bottom: 1px solid #cccccc;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	81 border-color: #cccccc;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	82 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	83 a.dark_bg_link:hover {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	84 color: white; /* #0088cc; */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	85 border-bottom: 1px solid white;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	86 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	87
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	88 .leading_link_dot {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	89 border-bottom: white solid 1px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	90 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	91
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	92 a.header_link, a.header_link:hover, a.header_link:visited {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	93 color: black;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	94 border-bottom: 1px solid #bbb;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	95 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	96
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	97
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	98 .dotted-link {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	99 cursor: pointer;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	100 text-decoration: none;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	101 /color: #0c4f72;/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	102 color: #0077B5;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	103 border-bottom: 1px dashed #487b95;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	104 border-color: #487b95; /* #487b95 */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	105 border-color: rgba(12, 79, 114, 0.2);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	106 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	107 .dotted-link:hover {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	108 text-decoration: none;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	109 color: #b33 !important;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	110 border-bottom: 1px dashed #b33 !important;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	111 border-color: rgba(255, 0, 0, 0.2) !important;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	112 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	113 .js:visited {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	114 color: #0077B5;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	115 border-bottom: 1px dashed #487b95;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	116 border-color: #487b95;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	117 border-color: rgba(12, 79, 114, 0.2);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	118 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	119
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	120 .selected-switch {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	121 background-color: #fafad2;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	122 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	123
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	124 .json-code {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	125 display: none;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	126 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	127 .smallcapitals {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	128 font-size: .875em;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	129 letter-spacing: .15em;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	130 margin-right: -.15em;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	131 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	132 .highlight {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	133 background-color:#FFF9B5;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	134 padding: 0 3px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	135 margin-left: -3px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	136 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	137
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	138 ul.list {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	139 list-style-type: none;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	140 padding: 0 0 0 2em;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	141 margin: -0.5em 0 0 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	142 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	143 ul.list li {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	144 margin-bottom: 0.7em;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	145 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	146
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	147 ul.mdash {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	148 margin: -1em 0 0 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	149 padding: 0 0 0 2em;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	150 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	151 ul.mdash li {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	152 margin-bottom: 0.7em;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	153 list-style-type: none;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	154 text-indent: -1.3em;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	155 behavior: expression(!this.before ? this.before = this.innerHTML = '— ' + this.innerHTML : '');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	156 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	157 ul.mdash li:before {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	158 content: '\2014\a0';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	159 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	160
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	161 .small_line_indent {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	162 height: 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	163 margin-top: -7px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	164 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	165 /************/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	166
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	167 /* Tooltips */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	168 .tooltip {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	169 font-size: 0.9em;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	170 margin-bottom: 5px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	171 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	172 .tooltip.in {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	173 opacity: 1;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	174 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	175 .tooltip-inner {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	176 text-align: left;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	177 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	178 .tooltip-link,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	179 .tooltip-link:visited {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	180 text-decoration: none;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	181 color: #000;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	182 border-bottom: 1px dashed #bbb;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	183 cursor: hand;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	184 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	185 .tooltip-link:hover {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	186 text-decoration: none;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	187 color: #b33;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	188 border-bottom: 1px dashed #b33;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	189 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	190 /************/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	191
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	192 /*********/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	193
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	194 .hs {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	195 /* Полупробел для
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	196 разделения разрядов чисел:
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	197 10<span class="hs"></span>000 */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	198 margin-left: .2em;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	199 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	200
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	201 .rhs {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	202 /* Полупробел на случай,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	203 если реальный пробел важен,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	204 например между ценой и валютой:
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	205 1<span class="rhs"> </span>$ */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	206 font-size: 50%;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	207 line-height: 1;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	208 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	209
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	210 /9490<span class="rhs"> </span>€<br/>/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	211 /12<span class="hs"></span>650<span class="rhs"> </span>$<br/>/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	212 /379<span class="hs"></span>000<span/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	213 /class="rhs"> </span><span class="b-rub">Р</span><br/>/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	214 /100<span class="hs"></span>500<span class="rhs"> </span>+/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	215
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	216 /* for wrapping long words with no spaces */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	217 /* http://stackoverflow.com/questions/3247358/css-how-do-i-wrap-text-with-no-whitespace-inside-a-td */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	218 .wrapword {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	219 white-space: -moz-pre-wrap !important; /* Mozilla, since 1999 */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	220 white-space: -pre-wrap; /* Opera 4-6 */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	221 white-space: -o-pre-wrap; /* Opera 7 */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	222 white-space: pre-wrap; /* css-3 */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	223 word-wrap: break-word; /* Internet Explorer 5.5+ */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	224 word-break: break-all;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	225 white-space: normal;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	226 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	227
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	228
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	229 .space_1px {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	230 height: 1px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	231 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	232 .space_2px {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	233 height: 2px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	234 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	235 .space_3px {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	236 height: 3px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	237 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	238 .space_4px {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	239 height: 4px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	240 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	241 .space_5px {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	242 height: 5px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	243 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	244 .space_6px {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	245 height: 6px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	246 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	247 .space_7px {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	248 height: 7px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	249 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	250 .space_8px {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	251 height: 8px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	252 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	253 .space_9px {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	254 height: 9px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	255 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	256 .space_10px {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	257 height: 10px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	258 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	259 .layout-table {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	260 width: 99%;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	261 border-spacing: 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	262 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	263
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	264 .layout-table td.layout-table-td {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	265 vertical-align: top;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	266 padding: 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	267 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	268 .layout-table td.layout-table-fst-td {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	269 min-width: 400px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	270 padding-right: 50px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	271 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	272 .layout-table td.layout-table-snd-td {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	273 min-width: 200px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	274 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	275 .layout-table td.layout-table-trd-td {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	276 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	277
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	278 .top-panel {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	279 background-color: #444;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	280 color: white;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	281 min-width: 650px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	282 padding: 8px 10px 0 147px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	283 min-height: 70px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	284 text-shadow: -1px -1px 0 #111;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	285 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	286 .top-panel span {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	287 color: white;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	288 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	289 .top-panel a {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	290 color: white;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	291 border-bottom: 1px solid white;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	292 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	293 #to_main_menu_button a {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	294 border-bottom: none;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	295 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	296 .page_title {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	297 margin-top: -3px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	298 margin-bottom: -3px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	299 color: white;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	300 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	301 .page_subtitle {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	302 line-height: 100%;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	303 white-space: nowrap;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	304 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	305 .content {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	306 margin-left: 147px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	307 width: 90%;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	308 /padding-top: 20px;/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	309 margin-bottom: 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	310 /padding-bottom: 50px;/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	311 /{# padding-right: 20px;#}/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	312 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	313 .p_after_content {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	314 margin-left: 147px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	315 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	316 .links_after_content{
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	317 font-size: 14px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	318 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	319
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	320 p {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	321 display: block;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	322 font-size: 12px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	323 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	324
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	325 h1 {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	326 display: block;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	327 font-size: 26px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	328 padding: 0 -3px 0 5px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	329 -webkit-margin-before: 5px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	330 -webkit-margin-after: 0px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	331 -webkit-margin-start: 0px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	332 -webkit-margin-end: 0px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	333 font-weight: bold;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	334 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	335
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	336 #header {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	337 display: block;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	338 width: 100%;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	339 margin-bottom: 10px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	340 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	341
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	342 .logo_img {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	343 height: 40px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	344 margin-bottom: -10px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	345 margin-left: -6px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	346 margin-right: -7px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	347 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	348 </style>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	349
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	350 <style rel="stylesheet">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	351 .report-and-plots {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	352 margin-top: 15px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	353 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	354
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	355 /****************/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	356 /* REPORT TABLE */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	357 .report {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	358 margin: 0 100px 50px 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	359 float: left;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	360 font-size: 1em;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	361 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	362
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	363 #main_report {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	364 /min-width: 600px;/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	365 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	366
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	367 /#extended_link {/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	368 /margin-top: 5px;/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	369 /}/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	370
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	371 #ref_report {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	372 /min-width: 300px;/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	373 margin-right: 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	374 margin-bottom: 20px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	375 /margin-right: 200px;/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	376 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	377
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	378 .report td {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	379 margin: 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	380 padding: 2px 0.6em 0 14px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	381 /min-width: 100px;/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	382 max-width: 400px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	383 white-space: nowrap;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	384 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	385 .report td.number {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	386 text-align: right;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	387 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	388
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	389 .report tr.top_row_tr td,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	390 .report tr.group_header td {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	391 font-weight: bold;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	392 border-bottom: 1px solid #ddd;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	393 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	394 .report tr.group_header td {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	395 height: 20px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	396 vertical-align: bottom;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	397 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	398
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	399 #ref_report tr.top_row_tr td,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	400 #ref_report tr.group_header td {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	401 font-weight: normal;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	402 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	403
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	404 .report tr td:first-child {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	405 padding-left: 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	406 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	407 .report tr td:last-child {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	408 padding-right: 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	409 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	410
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	411 .report tr.row_hidden, tr.group_empty {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	412 display: none;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	413 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	414
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	415 .report tr.secondary_hidden {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	416 display: none;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	417 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	418
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	419 /.report td.secondary_td {/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	420 /padding-left: 10px !important;/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	421 /}/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	422
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	423 span.heatmap_legend {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	424 font-size: 11px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	425 display: inline-block;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	426 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	427
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	428 #heatmap_header {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	429 margin-right: 30px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	430 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	431
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	432 #combined_reference_length {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	433 padding-top: 1px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	434 padding-bottom: 15px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	435 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	436
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	437 span.metric-name.expandable {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	438 margin-left: -13px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	439 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	440
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	441 span.metric-name.secondary {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	442 margin-left: 13px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	443 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	444
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	445 span.metric-name.expandable.collapsed::before {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	446 content: '+ ';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	447 color: #CCC;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	448 cursor: pointer;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	449 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	450
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	451 span.metric-name.expandable.expanded::before {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	452 content: '\2212\a0'; /* &minus&nbsp */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	453 color: #CCC;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	454 cursor: pointer;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	455 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	456
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	457 .report_legend {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	458 padding-left: 15px; /* compensate drag handles */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	459 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	460
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	461 #contigs_are_ordered {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	462 z-index: 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	463 position: relative;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	464 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	465
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	466
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	467 /*.report .report-table-header {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	468 font-weight: bold;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	469 }*/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	470
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	471 /*.report thead td {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	472 border-bottom: 1px solid #bbb;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	473 }*/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	474
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	475
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	476 /*************/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	477 /* Draggable */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	478 table.moving_table {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	479 box-shadow: -0px 0px 5px 1px #888888;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	480 -moz-box-shadow: -0px 0px 5px 1px #888888;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	481 -webkit-box-shadow: -0px 0px 5px 1px #888888;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	482 /outline: 1px solid #888888;/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	483 background-color: white;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	484 z-index: 3 !important;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	485 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	486
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	487 table.draggable .drag_handle {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	488 padding: 2px 1px 0 1px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	489 margin: 0 2px 0 1px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	490
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	491 cursor: grab;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	492 cursor: -moz-grab;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	493 cursor: -webkit-grab;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	494 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	495
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	496 table.draggable .drag_handle .drag_image {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	497 height: 9px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	498 width: 9px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	499 display: inline-block;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	500 background: url("data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAkAAAAJCAIAAABv85FHAAAACXBIWXMAAAsTAAALEwEAmpwYAAAAiElEQVQImV2OsQ3FIAxEz2AhCAukyATZf5ZMQI8okZUjhfWj6F/pd09n6b1f1wUgxkgSAACS53lqSmnfdxHBLyJCMucsc877vv201nobKSUl2VoLIeATksdxKEmf+UqOxczGGDHGP7Ztm5qZmfmkYx8upehaq/fu4P2WZK1VAdRaAbjqXghBVR9BvlQcgtQsKgAAAABJRU5ErkJggg==") no-repeat;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	501 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	502
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	503 table.draggable .drag_handle:active,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	504 table.draggable td.cell_of_moving_table .drag_handle {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	505 cursor: grabbing !important;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	506 cursor: -moz-grabbing !important;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	507 cursor: -webkit-grabbing !important;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	508 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	509
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	510 /* Override the styles for the first and the last columns of the table.report.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	511 The cloned table contains a single column which is both first and last,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	512 and we don't need it to inherit those styles. */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	513 table.draggable td.cell_of_moving_table {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	514 padding-left: 14px !important;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	515 padding-right: 0.6em !important;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	516 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	517
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	518 table.draggable td.hovered_column_td {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	519 background-color: #cccccc;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	520 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	521
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	522 table.draggable td.second_through_last_col_headers_td {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	523 padding-left: 0 !important; /* compensate handle images */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	524 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	525
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	526 table.draggable td.cell_of_empty_space * {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	527 visibility: hidden;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	528 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	529
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	530 table.draggable td.cell_of_empty_space {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	531 border: none !important;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	532 /*border-left: 1px solid #888888;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	533 border-right: 1px solid #888888;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	534 margin-right: -1px !important;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	535 margin-left: -1px !important; */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	536 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	537
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	538 /*table.draggable td.bottom_cell_of_empty_space {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	539 border-bottom: 1px solid #888888 !important;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	540 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	541
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	542 table.draggable td.top_cell_of_empty_space {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	543 border-top: 1px solid #888888 !important;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	544 /*margin-top: -1px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	545 }*/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	546
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	547 table.draggable td.top_cell_of_empty_space {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	548 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	549
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	550 table.draggable td.left_to_cell_of_empty_space {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	551 /outline-left: 1px solid #888888;/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	552 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	553
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	554 table.draggable td.right_to_cell_of_empty_space {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	555 /outline-right: 1px solid #888888;/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	556 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	557
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	558 /********/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	559 /* META */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	560 #main_ref_genome {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	561
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	562 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	563
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	564 table#refgenome td.last_row {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	565 border-top: 1px solid #ddd;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	566 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	567
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	568 /************/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	569 /* PLOTTING */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	570 .plot-switch {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	571 margin-left: 10px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	572 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	573
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	574 .plot-mis-type-switch {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	575 margin-left: 23px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	576 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	577
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	578 .plot-wrapper {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	579 padding-right: 80px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	580 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	581
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	582 .plot-header {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	583 margin-left: 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	584 font-weight: bold;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	585 height: 1.5em;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	586 display: block;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	587 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	588
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	589 .plots {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	590 margin-left: -30px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	591 margin-right: 70px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	592 margin-top: 2px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	593 margin-bottom: 50px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	594 float: left;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	595 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	596 .plots td {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	597 vertical-align: top;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	598 white-space: nowrap;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	599 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	600
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	601 .plots div#plots-switches, tr#plots-into-tr p {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	602 padding-left: 30px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	603 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	604
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	605 #legend-placeholder {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	606 min-width: 80px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	607 margin-top: -2px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	608 margin-left: -5px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	609 position: relative;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	610 z-index: 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	611 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	612
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	613 .legendColorBox div {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	614 display: none;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	615 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	616
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	617 #legend-placeholder td {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	618 vertical-align: top;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	619 white-space: nowrap;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	620 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	621
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	622 #plot-placeholder {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	623 width: 986px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	624 height: 600px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	625
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	626 /* for auto sizing plots when resizing the page
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	627 min-width: 500px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	628 min-height: 500px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	629 width: 100%;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	630 min-height: 400px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	631 height: 50%; */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	632
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	633 margin-left: -55px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	634 margin-right: 20px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	635 float: left;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	636
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	637 z-index: 2;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	638 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	639
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	640 #change-assembly {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	641 white-space: nowrap;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	642 width: 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	643 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	644
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	645 /*************/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	646 /* Plot tips */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	647 #plot_tip {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	648 position: absolute;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	649 opacity: 1;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	650 padding: 2px 5px 2px 5px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	651
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	652 z-index: 1;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	653 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	654
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	655 #plot_tip_vertical_rule, #plot_tip_horizontal_rule {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	656 position: absolute;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	657 border: 1px solid #BBB;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	658 z-index: -2;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	659 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	660
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	661 #plot_tip_vertical_rule {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	662 border-left: 1px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	663 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	664
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	665 #plot_tip_horizontal_rule {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	666 border-top: 1px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	667 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	668
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	669 .white_stroked {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	670 color: black;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	671 background-color: white;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	672 text-shadow:
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	673 -3px -3px 0 white,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	674 3px -3px 0 white,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	675 -3px 3px 0 white,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	676 3px 3px 0 white;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	677 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	678
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	679 img.icon_plot {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	680 width: 14px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	681 height: 12px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	682 display: inline-block;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	683 content: '';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	684 background: 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6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	685 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	686
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	687 #sortRefsBtn label {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	688 display: block;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	689 margin-left: 20px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	690 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	691 #sortRefsBtn input {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	692 float: left;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	693 margin-left: -20px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	694 margin-right: 7px;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	695 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	696
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	697 #mincontig {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	698 margin-bottom: 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	699 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	700 </style>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	701
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	702
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	703 <script type="text/javascript">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	704 /! jQuery v1.8.2 jquery.com \| jquery.org/license /
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6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	706 </script>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	707
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6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	714 </script>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	715
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	716 <script type="text/javascript">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	717 /*
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	718 * jQuery.flot.dashes
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	719 *
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	720 * options = {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	721 * series: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	722 * dashes: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	723 *
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	724 * // show
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	725 * // default: false
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	726 * // Whether to show dashes for the series.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	727 * show: <boolean>,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	728 *
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	729 * // lineWidth
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	730 * // default: 2
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	731 * // The width of the dashed line in pixels.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	732 * lineWidth: <number>,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	733 *
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	734 * // dashLength
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	735 * // default: 10
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	736 * // Controls the length of the individual dashes and the amount of
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	737 * // space between them.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	738 * // If this is a number, the dashes and spaces will have that length.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	739 * // If this is an array, it is read as [ dashLength, spaceLength ]
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	740 * dashLength: <number> or <array[2]>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	741 * }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	742 * }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	743 * }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	744 */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	745 (function($){
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	746
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	747 function init(plot) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	748
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	749 plot.hooks.processDatapoints.push(function(plot, series, datapoints) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	750
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	751 if (!series.dashes.show) return;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	752
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	753 plot.hooks.draw.push(function(plot, ctx) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	754
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	755 var plotOffset = plot.getPlotOffset(),
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	756 axisx = series.xaxis,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	757 axisy = series.yaxis;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	758
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	759 function plotDashes(xoffset, yoffset) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	760
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	761 var points = datapoints.points,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	762 ps = datapoints.pointsize,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	763 prevx = null,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	764 prevy = null,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	765 dashRemainder = 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	766 dashOn = true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	767 dashOnLength,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	768 dashOffLength;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	769
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	770 if (series.dashes.dashLength[0]) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	771 dashOnLength = series.dashes.dashLength[0];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	772 if (series.dashes.dashLength[1]) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	773 dashOffLength = series.dashes.dashLength[1];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	774 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	775 dashOffLength = dashOnLength;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	776 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	777 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	778 dashOffLength = dashOnLength = series.dashes.dashLength;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	779 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	780
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	781 ctx.beginPath();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	782
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	783 for (var i = ps; i < points.length; i += ps) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	784
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	785 var x1 = points[i - ps],
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	786 y1 = points[i - ps + 1],
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	787 x2 = points[i],
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	788 y2 = points[i + 1];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	789
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	790 if (x1 == null \|\| x2 == null) continue;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	791
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	792 // clip with ymin
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	793 if (y1 <= y2 && y1 < axisy.min) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	794 if (y2 < axisy.min) continue; // line segment is outside
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	795 // compute new intersection point
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	796 x1 = (axisy.min - y1) / (y2 - y1) * (x2 - x1) + x1;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	797 y1 = axisy.min;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	798 } else if (y2 <= y1 && y2 < axisy.min) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	799 if (y1 < axisy.min) continue;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	800 x2 = (axisy.min - y1) / (y2 - y1) * (x2 - x1) + x1;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	801 y2 = axisy.min;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	802 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	803
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	804 // clip with ymax
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	805 if (y1 >= y2 && y1 > axisy.max) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	806 if (y2 > axisy.max) continue;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	807 x1 = (axisy.max - y1) / (y2 - y1) * (x2 - x1) + x1;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	808 y1 = axisy.max;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	809 } else if (y2 >= y1 && y2 > axisy.max) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	810 if (y1 > axisy.max) continue;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	811 x2 = (axisy.max - y1) / (y2 - y1) * (x2 - x1) + x1;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	812 y2 = axisy.max;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	813 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	814
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	815 // clip with xmin
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	816 if (x1 <= x2 && x1 < axisx.min) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	817 if (x2 < axisx.min) continue;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	818 y1 = (axisx.min - x1) / (x2 - x1) * (y2 - y1) + y1;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	819 x1 = axisx.min;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	820 } else if (x2 <= x1 && x2 < axisx.min) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	821 if (x1 < axisx.min) continue;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	822 y2 = (axisx.min - x1) / (x2 - x1) * (y2 - y1) + y1;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	823 x2 = axisx.min;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	824 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	825
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	826 // clip with xmax
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	827 if (x1 >= x2 && x1 > axisx.max) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	828 if (x2 > axisx.max) continue;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	829 y1 = (axisx.max - x1) / (x2 - x1) * (y2 - y1) + y1;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	830 x1 = axisx.max;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	831 } else if (x2 >= x1 && x2 > axisx.max) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	832 if (x1 > axisx.max) continue;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	833 y2 = (axisx.max - x1) / (x2 - x1) * (y2 - y1) + y1;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	834 x2 = axisx.max;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	835 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	836
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	837 if (x1 != prevx \|\| y1 != prevy) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	838 ctx.moveTo(axisx.p2c(x1) + xoffset, axisy.p2c(y1) + yoffset);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	839 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	840
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	841 var ax1 = axisx.p2c(x1) + xoffset,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	842 ay1 = axisy.p2c(y1) + yoffset,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	843 ax2 = axisx.p2c(x2) + xoffset,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	844 ay2 = axisy.p2c(y2) + yoffset,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	845 dashOffset;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	846
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	847 function lineSegmentOffset(segmentLength) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	848
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	849 var c = Math.sqrt(Math.pow(ax2 - ax1, 2) + Math.pow(ay2 - ay1, 2));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	850
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	851 if (c <= segmentLength) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	852 return {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	853 deltaX: ax2 - ax1,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	854 deltaY: ay2 - ay1,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	855 distance: c,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	856 remainder: segmentLength - c
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	857 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	858 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	859 var xsign = ax2 > ax1 ? 1 : -1,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	860 ysign = ay2 > ay1 ? 1 : -1;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	861 return {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	862 deltaX: xsign * Math.sqrt(Math.pow(segmentLength, 2) / (1 + Math.pow((ay2 - ay1)/(ax2 - ax1), 2))),
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	863 deltaY: ysign * Math.sqrt(Math.pow(segmentLength, 2) - Math.pow(segmentLength, 2) / (1 + Math.pow((ay2 - ay1)/(ax2 - ax1), 2))),
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	864 distance: segmentLength,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	865 remainder: 0
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	866 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	867 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	868 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	869 //-end lineSegmentOffset
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	870
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	871 do {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	872
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	873 dashOffset = lineSegmentOffset(
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	874 dashRemainder > 0 ? dashRemainder :
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	875 dashOn ? dashOnLength : dashOffLength);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	876
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	877 if (dashOffset.deltaX != 0 \|\| dashOffset.deltaY != 0) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	878 if (dashOn) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	879 ctx.lineTo(ax1 + dashOffset.deltaX, ay1 + dashOffset.deltaY);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	880 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	881 ctx.moveTo(ax1 + dashOffset.deltaX, ay1 + dashOffset.deltaY);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	882 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	883 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	884
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	885 dashOn = !dashOn;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	886 dashRemainder = dashOffset.remainder;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	887 ax1 += dashOffset.deltaX;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	888 ay1 += dashOffset.deltaY;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	889
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	890 } while (dashOffset.distance > 0);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	891
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	892 prevx = x2;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	893 prevy = y2;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	894 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	895
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	896 ctx.stroke();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	897 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	898 //-end plotDashes
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	899
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	900 ctx.save();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	901 ctx.translate(plotOffset.left, plotOffset.top);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	902 ctx.lineJoin = 'round';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	903
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	904 var lw = series.dashes.lineWidth,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	905 sw = series.shadowSize;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	906
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	907 // FIXME: consider another form of shadow when filling is turned on
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	908 if (lw > 0 && sw > 0) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	909 // draw shadow as a thick and thin line with transparency
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	910 ctx.lineWidth = sw;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	911 ctx.strokeStyle = "rgba(0,0,0,0.1)";
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	912 // position shadow at angle from the mid of line
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	913 var angle = Math.PI/18;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	914 plotDashes(Math.sin(angle) * (lw/2 + sw/2), Math.cos(angle) * (lw/2 + sw/2));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	915 ctx.lineWidth = sw/2;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	916 plotDashes(Math.sin(angle) * (lw/2 + sw/4), Math.cos(angle) * (lw/2 + sw/4));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	917 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	918
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	919 ctx.lineWidth = lw;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	920 ctx.strokeStyle = series.color;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	921
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	922 if (lw > 0) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	923 plotDashes(0, 0);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	924 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	925
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	926 ctx.restore();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	927
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	928 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	929 //-end draw hook
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	930
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	931 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	932 //-end processDatapoints hook
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	933
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	934 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	935 //-end init
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	936
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	937 $.plot.plugins.push({
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	938 init: init,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	939 options: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	940 series: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	941 dashes: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	942 show: false,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	943 lineWidth: 2,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	944 dashLength: 10
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	945 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	946 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	947 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	948 name: 'dashes',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	949 version: '0.1'
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	950 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	951
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	952 })(jQuery)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	953
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	954
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	955 </script>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	956
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	957 <script type="text/javascript">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	958
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	959 var cumulative = {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	960 isInitialized: false,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	961
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	962 maxX: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	963 maxY: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	964 maxYTick: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	965 series: null,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	966 showWithData: null,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	967 colors: [],
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	968
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	969 draw: function(name, title, colors, filenames, listsOfLengths, refLengths, tickX,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	970 placeholder, legendPlaceholder, glossary, order, scalePlaceholder) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	971
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	972 $(scalePlaceholder).empty();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	973
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	974 if (!this.isInitialized) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	975 // div.html(
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	976 // "<span class='plot-header'>" + addTooltipIfDefinitionExists(glossary, title) + "</span>" +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	977 // "<div class='plot-placeholder' id='cumulative-plot-placeholder'></div>"
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	978 // );
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	979 cumulative.series = [];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	980 var plotsN = filenames.length;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	981 var refLength = 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	982 if (refLengths) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	983 for (var i = 0, size = refLengths.length; i < size; i++)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	984 refLength += refLengths[i];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	985 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	986 if (refLength) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	987 cumulative.maxY = refLength;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	988 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	989
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	990 cumulative.colors = colors;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	991
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	992 function addCumulativeLenData(label, index, color, lengths, isRef) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	993 if (!(lengths instanceof Array))
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	994 lengths = [lengths];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	995 var size = lengths.length;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	996 var points = {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	997 data: new Array(size + 1),
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	998 label: label,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	999 number: index,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1000 color: color
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1001 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1002
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1003 points.data[0] = [0, 0];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1004
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1005 var y = 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1006 for (var j = 0; j < size; j++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1007 y += lengths[j];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1008 points.data[j+1] = [j+1, y];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1009 if (y > cumulative.maxY) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1010 cumulative.maxY = y;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1011 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1012 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1013
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1014 if (size > cumulative.maxX) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1015 cumulative.maxX = size;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1016 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1017 if (isRef){
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1018 points.isReference = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1019 points.dashes = {show: true, lineWidth: 1};
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1020 if (size < cumulative.maxX) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1021 points.data[size + 1] = [cumulative.maxX, y];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1022 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1023 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1024 return points;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1025 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1026
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1027 for (var i = 0; i < plotsN; i++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1028 var lengths = listsOfLengths[order[i]];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1029 var asm_name = filenames[order[i]];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1030 var color = colors[order[i]];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1031 cumulative.series[i] = addCumulativeLenData(asm_name, i, color, lengths);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1032 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1033
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1034 // var lineColors = [];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1035 //
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1036 // for (i = 0; i < colors.length; i++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1037 // lineColors.push(changeColor(colors[i], 0.9, false));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1038 // }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1039
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1040 for (i = 0; i < plotsN; i++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1041 if (typeof broken_scaffolds_labels !== undefined && $.inArray(filenames[order[i]], broken_scaffolds_labels) != -1) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1042 cumulative.series[i].dashes = {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1043 show: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1044 lineWidth: 1
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1045 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1046 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1047 else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1048 cumulative.series[i].lines = {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1049 show: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1050 lineWidth: 1
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1051 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1052 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1053 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1054
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1055 for (i = 0; i < plotsN; i++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1056 cumulative.colors.push(cumulative.series[i].color);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1057 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1058
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1059 //cumulative.maxYTick = getMaxDecimalTick(cumulative.maxY);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1060
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1061 if (refLengths) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1062 size = refLengths.length;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1063 var ref_label = 'reference, ' + toPrettyString(refLength, 'bp');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1064 cumulative.series.push(addCumulativeLenData(ref_label, i, '#000000', refLengths, true));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1065 cumulative.colors.push('#000000');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1066 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1067
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1068
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1069 // if (referenceLength) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1070 // yaxes.push({
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1071 // ticks: [referenceLength],
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1072 // min: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1073 // max: maxYTick,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1074 // position: 'right',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1075 //// labelWidth: 50,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1076 // reserveSpace: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1077 // tickFormatter: function (val, axis) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1078 // return '<div style="">' + toPrettyStringWithDimension(referenceLength, 'bp') +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1079 // ' <span style="margin-left: -0.2em;">(reference)</span></div>';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1080 // },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1081 // minTickSize: 1,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1082 // });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1083 // }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1084 var yaxis = {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1085 min: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1086 //max: cumulative.maxYTick,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1087 labelWidth: 120,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1088 reserveSpace: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1089 lineWidth: 0.5,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1090 color: '#000000',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1091 tickFormatter: getBpTickFormatter(cumulative.maxY),
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1092 minTickSize: 1
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1093 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1094 var yaxes = [yaxis];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1095
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1096 cumulative.showWithData = function(series, colors) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1097 var plot = $.plot(placeholder, series, {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1098 shadowSize: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1099 colors: cumulative.colors,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1100 legend: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1101 container: $('useless-invisible-element-that-does-not-even-exist'),
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1102 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1103 // legend: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1104 // container: legendPlaceholder,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1105 // position: 'se',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1106 // labelBoxBorderColor: '#FFF',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1107 // labelFormatter: labelFormatter,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1108 // },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1109 grid: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1110 borderWidth: 1,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1111 hoverable: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1112 autoHighlight: false,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1113 mouseActiveRadius: 1000
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1114 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1115 yaxes: yaxes,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1116 xaxis: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1117 min: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1118 max: cumulative.maxX,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1119 lineWidth: 0.5,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1120 color: '#000',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1121 tickFormatter: getContigNumberTickFormatter(cumulative.maxX, tickX),
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1122 minTickSize: tickX
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1123 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1124 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1125
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1126 bindTip(placeholder, series, plot, ordinalNumberToPrettyString, tickX, 'contig', 'bottom right');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1127 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1128
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1129 cumulative.isInitialized = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1130 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1131
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1132 addLegendClickEvents(cumulative, filenames.length, showPlotWithInfo, refLengths);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1133
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1134 showPlotWithInfo(cumulative);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1135
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1136 $('#contigs_are_ordered').show();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1137 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1138 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1139
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1140 </script>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1141
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1142 <script type="text/javascript">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1143
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1144 var nx = {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1145 nx: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1146 isInitialized: false,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1147 maxY: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1148 maxYTick: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1149 series: null,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1150 showWithData: null
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1151 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1152
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1153 nax: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1154 isInitialized: false,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1155 maxY: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1156 maxYTick: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1157 series: null,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1158 showWithData: null
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1159 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1160
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1161 ngx: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1162 isInitialized: false,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1163 maxY: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1164 maxYTick: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1165 series: null,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1166 showWithData: null
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1167 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1168
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1169 ngax: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1170 isInitialized: false,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1171 maxY: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1172 maxYTick: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1173 series: null,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1174 showWithData: null
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1175 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1176
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1177 draw: function (name, title, colors, filenames, data, refPlotValue, tickX,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1178 placeholder, legendPlaceholder, glossary, order, scalePlaceholder) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1179
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1180 $(scalePlaceholder).empty();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1181
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1182 var coordX = data.coord_x;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1183 var coordY = data.coord_y;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1184
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1185 var cur_filenames = data.filenames;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1186 var info = nx[name];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1187
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1188 if (!info.isInitialized) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1189 var plotsN = cur_filenames.length;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1190 info.series = new Array(plotsN);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1191
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1192 for (var i = 0; i < plotsN; i++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1193 var index = $.inArray(cur_filenames[order[i]], filenames);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1194 var plot_coordX = coordX[order[i]];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1195 var plot_coordY = coordY[order[i]];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1196 var size = plot_coordX.length;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1197
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1198 info.series[i] = {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1199 data: [],
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1200 label: filenames[index],
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1201 number: index,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1202 color: colors[index]
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1203 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1204 info.series[i].data.push([0.0, plot_coordY[0]]);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1205 var currentLen = 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1206 var x = 0.0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1207
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1208 for (var k = 0; k < size; k++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1209 info.series[i].data.push([plot_coordX[k], plot_coordY[k]]);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1210 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1211
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1212 if (info.series[i].data[0][1] > info.maxY) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1213 info.maxY = info.series[i].data[0][1];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1214 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1215
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1216 var lastPt = info.series[i].data[info.series[i].data.length-1];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1217 info.series[i].data.push([lastPt[0], 0]);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1218 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1219
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1220 for (i = 0; i < plotsN; i++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1221 if (typeof broken_scaffolds_labels !== undefined && $.inArray(filenames[order[i]], broken_scaffolds_labels) != -1) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1222 info.series[i].dashes = {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1223 show: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1224 lineWidth: 1
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1225 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1226 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1227 else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1228 info.series[i].lines = {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1229 show: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1230 lineWidth: 1
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1231 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1232 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1233 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1234
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1235 // for (i = 0; i < plotsN; i++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1236 // plotsData[i].points = {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1237 // show: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1238 // radius: 1,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1239 // fill: 1,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1240 // fillColor: false,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1241 // }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1242 // }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1243
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1244 info.showWithData = function(series, colors) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1245 var plot = $.plot(placeholder, series, {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1246 shadowSize: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1247 colors: colors,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1248 legend: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1249 container: $('useless-invisible-element-that-does-not-even-exist'),
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1250 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1251 grid: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1252 borderWidth: 1,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1253 hoverable: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1254 autoHighlight: false,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1255 mouseActiveRadius: 1000
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1256 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1257 yaxis: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1258 min: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1259 // max: info.maxY,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1260 labelWidth: 120,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1261 reserveSpace: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1262 lineWidth: 0.5,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1263 color: '#000',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1264 tickFormatter: getBpTickFormatter(info.maxY),
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1265 minTickSize: 1
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1266 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1267 xaxis: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1268 min: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1269 max: 100,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1270 lineWidth: 0.5,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1271 color: '#000',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1272 tickFormatter: function (val, axis) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1273 if (val == 100) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1274 return ' x<span class="rhs"> </span>=<span class="rhs"> </span>100%'
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1275 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1276 return val;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1277 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1278 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1279 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1280 minTickSize: tickX
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1281 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1282 );
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1283
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1284 var firstLabel = $('.yAxis .tickLabel').last();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1285 firstLabel.prepend(title + '<span class="rhs"> </span>=<span class="rhs"> </span>');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1286
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1287 bindTip(placeholder, series, plot, toPrettyString, 1, '%', 'top right');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1288
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1289 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1290
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1291 info.isInitialized = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1292 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1293
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1294 addLegendClickEvents(info, filenames.length, showPlotWithInfo);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1295 showPlotWithInfo(info);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1296 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1297 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1298
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1299
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1300
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1301 </script>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1302
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1303 <script type="text/javascript">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1304
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1305 var normal_scale_span =
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1306 "<span class='selected-switch'>" +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1307 'Normal' +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1308 "</span>";
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1309 var normal_scale_a =
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1310 "<a class='dotted-link' onClick='setNormalScale()'>" +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1311 'Normal' +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1312 "</a>";
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1313 var log_scale_span =
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1314 "<span class='selected-switch'>" +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1315 'logarithmic' +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1316 "</span>";
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1317 var log_scale_a =
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1318 "<a class='dotted-link' onClick='setLogScale()'>" +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1319 'logarithmic' +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1320 "</a>";
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1321
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1322 var show_all_span =
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1323 "<span class='selected-switch gc'>" +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1324 'Back to overview' +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1325 "</span>";
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1326 var show_all_a =
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1327 "   <a class='dotted-link' onClick='showAll()'>" +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1328 'Back to overview' +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1329 "</a>";
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1330
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1331 var gc = {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1332 isInitialized: false,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1333
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1334 maxY: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1335 plot: null,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1336 series: null,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1337 showWithData: null,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1338 minPow: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1339 ticks: null,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1340 placeholder: null,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1341 legendPlaceholder: null,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1342 colors: null,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1343 yAxisLabeled: false,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1344
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1345 show_all_el: show_all_span,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1346 reference: false,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1347
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1348 normal_scale_el: null,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1349 log_scale_el: null,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1350
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1351 draw: function(name, title, colors, filenames, gcInfos, reflen, tickX,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1352 placeholder, legendPlaceholder, glossary, order, scalePlaceholder) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1353 gc.normal_scale_el = normal_scale_span;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1354 gc.log_scale_el = log_scale_a;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1355 $(scalePlaceholder).html(
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1356 "<div id='change-scale' style='margin-right: 3px; visibility: hidden;'>" +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1357 "<span id='normal_scale_label'>" +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1358 gc.normal_scale_el +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1359 "</span> / " +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1360 "<span id='log_scale_label'>" +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1361 gc.log_scale_el +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1362 "</span> scale" +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1363 "</div>"
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1364 );
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1365
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1366 var refIndex = gcInfos.reference_index;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1367 if (!gc.isInitialized) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1368 gc.legendPlaceholder = legendPlaceholder;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1369 gc.placeholder = placeholder;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1370 gc.colors = colors;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1371 gc.filenames = filenames;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1372
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1373 var bin_size = 1.0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1374 var plotsN = filenames.length;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1375 gc.series = new Array(plotsN + 1);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1376 gc.series[0] = new Array(plotsN);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1377
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1378 gc.maxY = 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1379 var minY = Number.MAX_VALUE;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1380
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1381 function updateMinY(y) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1382 if (y < minY && y != 0) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1383 minY = y;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1384 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1385 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1386 function updateMaxY(y) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1387 if (y > gc.maxY) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1388 gc.maxY = y;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1389 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1390 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1391
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1392 for (var i = 0; i < plotsN; i++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1393 gc.series[0][i] = {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1394 data: [],
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1395 label: filenames[order[i]],
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1396 number: order[i],
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1397 color: colors[order[i]]
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1398 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1399 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1400
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1401 function makeSeriesFromDistributions(distributionsXandY, series_i, plot_i) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1402 var distributionsX = distributionsXandY[0];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1403 var distributionsY = distributionsXandY[1];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1404
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1405 for (var j = 0; j < distributionsX.length; j++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1406 var x = distributionsX[j];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1407 var y = distributionsY[j];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1408 gc.series[series_i][plot_i].data.push([x, y]);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1409 updateMinY(y);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1410 updateMaxY(y);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1411 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1412 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1413
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1414 function makeSeries(listsOfGCInfo, listOfGcDistributions, seriesIdx) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1415 for (var i = 0; i < plotsN; i++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1416 if (listsOfGCInfo) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1417 makeSeriesFromInfo(listsOfGCInfo[order[i]], seriesIdx, i);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1418 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1419 makeSeriesFromDistributions(listOfGcDistributions[order[i]], seriesIdx, i);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1420 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1421 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1422 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1423
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1424 var listsOfGCInfo = gcInfos.lists_of_gc_info;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1425 var listOfGcDistributions = gcInfos.list_of_GC_distributions;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1426 makeSeries(listsOfGCInfo, listOfGcDistributions, 0);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1427
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1428 function makeSeriesFromInfo(GC_info, series_i, i) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1429 var cur_bin = 0.0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1430
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1431 var x = cur_bin;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1432 var y = filterAndSumGcInfo(GC_info, function(GC_percent) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1433 return GC_percent == cur_bin;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1434 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1435 gc.series[series_i][i].data.push([x, y]);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1436
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1437 updateMinY(y);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1438 updateMaxY(y);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1439
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1440 while (cur_bin < 100.0 - bin_size) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1441 cur_bin += bin_size;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1442
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1443 x = cur_bin;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1444 y = filterAndSumGcInfo(GC_info, function(GC_percent) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1445 return GC_percent > (cur_bin - bin_size) && GC_percent <= cur_bin;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1446 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1447 gc.series[series_i][i].data.push([x, y]);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1448
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1449 updateMinY(y);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1450 updateMaxY(y);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1451 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1452
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1453 x = 100.0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1454 y = filterAndSumGcInfo(GC_info, function(GC_percent) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1455 return GC_percent > cur_bin && GC_percent <= 100.0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1456 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1457
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1458 gc.series[series_i][i].data.push([x, y]);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1459
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1460 updateMinY(y);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1461 updateMaxY(y);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1462 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1463
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1464 for (i = 0; i < plotsN; i++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1465 if (typeof broken_scaffolds_labels !== undefined && $.inArray(filenames[order[i]], broken_scaffolds_labels) != -1) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1466 gc.series[0][i].dashes = {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1467 show: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1468 lineWidth: 1
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1469 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1470 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1471 else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1472 gc.series[0][i].lines = {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1473 show: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1474 lineWidth: 1
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1475 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1476 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1477 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1478
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1479 if (refIndex) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1480 gc.reference = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1481 gc.series[0].push({
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1482 data: [],
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1483 label: 'reference',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1484 isReference: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1485 number: filenames.length,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1486 lines: {},
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1487 dashes: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1488 show: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1489 lineWidth: 1
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1490 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1491 color: '#000000'
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1492 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1493 if (listsOfGCInfo) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1494 makeSeriesFromInfo(listsOfGCInfo[refIndex], 0, refIndex);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1495 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1496 makeSeriesFromDistributions(listOfGcDistributions[refIndex], 0, refIndex);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1497 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1498 gc.colors.push('#000000')
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1499 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1500
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1501 if (gcInfos.list_of_GC_contigs_distributions) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1502 listOfGcDistributions = gcInfos.list_of_GC_contigs_distributions;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1503 var maxY = 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1504 for (var file_n = 0; file_n < filenames.length; file_n++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1505 gc.series[file_n + 1] = new Array(1);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1506 gc.series[file_n + 1][0] = {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1507 data: [],
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1508 label: filenames[order[file_n]],
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1509 number: order[file_n],
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1510 color: colors[order[file_n]],
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1511 bars: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1512 show: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1513 lineWidth: 0.6,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1514 fill: 0.6,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1515 barWidth: 5
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1516 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1517 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1518
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1519 var distributionsX = listOfGcDistributions[file_n][0];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1520 var distributionsY = listOfGcDistributions[file_n][1];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1521
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1522 for (var j = 0; j < distributionsX.length; j++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1523 var x = distributionsX[j];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1524 var y = distributionsY[j];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1525 gc.series[file_n + 1][0].data.push([x, y]);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1526 maxY = Math.max(maxY, y);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1527 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1528 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1529 for (var file_n = 0; file_n < filenames.length; file_n++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1530 gc.series[file_n + 1][0].maxY = maxY;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1531 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1532 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1533 // Calculate the minimum possible non-zero Y to clip useless bottoms
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1534 // of logarithmic plots.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1535 var maxYTick = getMaxDecimalTick(gc.maxY);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1536 gc.minPow = Math.round(Math.log(minY) / Math.log(10));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1537 gc.ticks = [];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1538 for (var pow = gc.minPow; Math.pow(10, pow) < maxYTick; pow++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1539 gc.ticks.push(Math.pow(10, pow));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1540 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1541 gc.ticks.push(Math.pow(10, pow));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1542
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1543 gc.isInitialized = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1544 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1545
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1546 gc.showWithData = showInNormalScaleWithData;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1547 if (gcInfos.list_of_GC_contigs_distributions) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1548 createLegend(gc.filenames, gc.colors, 0, gc.reference);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1549 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1550 addLegendClickEvents(gc, filenames.length, showPlotWithInfo, false, 0);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1551
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1552 showPlotWithInfo(gc, 0);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1553
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1554 $('#change-scale').css('visibility', 'visible');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1555 $('#gc_info').show();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1556 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1557 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1558
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1559 function showAll() {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1560 $('#change-scale').show();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1561 $('#gc_info').show();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1562 $('#gc_contigs_info').hide();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1563 createLegend(gc.filenames, gc.colors, 0, gc.reference);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1564
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1565 gc.show_all_el = show_all_span;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1566 gc.showWithData = gc.log_scale_el == log_scale_a ? showInNormalScaleWithData : showInLogarithmicScaleWithData;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1567
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1568 $('#show_all_label').html(gc.show_all_el);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1569 showPlotWithInfo(gc, 0);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1570 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1571
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1572 function showPlot(index) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1573 $('#change-scale').hide();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1574 $('#gc_info').hide();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1575 $('#gc_contigs_info').show();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1576 createLegend([gc.filenames[index - 1]], [gc.colors[index - 1]], index);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1577
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1578 gc.show_all_el = show_all_a;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1579 gc.showWithData = showOneAssembly;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1580
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1581 $('#show_all_label').html(gc.show_all_el);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1582 showPlotWithInfo(gc, index);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1583 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1584
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1585 function showOneAssembly(series, colors) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1586 if (series == null) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1587 return;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1588 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1589
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1590 gc.plot = $.plot(gc.placeholder, series, {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1591 shadowSize: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1592 colors: colors,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1593 legend: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1594 container: $('useless-invisible-element-that-does-not-even-exist')
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1595 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1596 grid: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1597 hoverable: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1598 borderWidth: 1,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1599 autoHighlight: false,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1600 mouseActiveRadius: 1000
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1601 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1602 yaxis: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1603 min: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1604 max: series[0].maxY * 1.1,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1605 labelWidth: 120,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1606 reserveSpace: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1607 lineWidth: 0.5,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1608 color: '#000',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1609 tickFormatter: getJustNumberTickFormatter(gc.maxY),
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1610 minTickSize: 1
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1611 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1612 xaxis: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1613 min: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1614 max: 100,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1615 lineWidth: 0.5,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1616 color: '#000',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1617 tickFormatter: function (val, axis) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1618 if (val == 100) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1619 return ' 100% GC'
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1620 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1621 return val;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1622 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1623 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1624 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1625 minTickSize: 1
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1626 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1627 );
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1628
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1629 var firstLabel = $('.yAxis .tickLabel').last();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1630 firstLabel.append(' contigs');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1631 unBindTips(gc.placeholder);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1632 bindTip(gc.placeholder, series, gc.plot, getIntervalToPrettyString(5), 1, '%<span class="rhs"> </span>GC', 'top right');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1633 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1634
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1635 function showInNormalScaleWithData(series, colors) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1636 if (series == null \|\| gc.maxY == null)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1637 return;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1638
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1639 gc.yAxisLabeled = false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1640
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1641 gc.plot = $.plot(gc.placeholder, series, {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1642 shadowSize: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1643 colors: colors,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1644 legend: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1645 container: $('useless-invisible-element-that-does-not-even-exist'),
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1646 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1647 grid: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1648 borderWidth: 1,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1649 hoverable: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1650 autoHighlight: false,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1651 mouseActiveRadius: 1000,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1652 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1653 yaxis: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1654 min: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1655 // max: gc.maxY + 0.1 * gc.maxY,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1656 labelWidth: 120,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1657 reserveSpace: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1658 lineWidth: 0.5,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1659 color: '#000',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1660 tickFormatter: windowsTickFormatter,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1661 minTickSize: 1
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1662 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1663 xaxis: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1664 min: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1665 max: 100,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1666 lineWidth: 0.5,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1667 color: '#000',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1668 tickFormatter: function (val, axis) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1669 if (val == 100) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1670 return ' 100% GC'
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1671 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1672 return val;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1673 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1674 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1675 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1676 minTickSize: 1
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1677 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1678 );
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1679
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1680 var firstLabel = $('.yAxis .tickLabel').last();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1681 firstLabel.append(' windows');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1682 bindTip(gc.placeholder, series, gc.plot, toPrettyString, 1, '%<span class="rhs"> </span>GC', 'top right');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1683 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1684
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1685
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1686 function showInLogarithmicScaleWithData(series, colors) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1687 if (series == null \|\| gc.maxY == null \|\| gc.minPow == null) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1688 return;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1689 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1690
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1691 gc.yAxisLabeled = false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1692
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1693 gc.plot = $.plot(gc.placeholder, series, {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1694 shadowSize: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1695 colors: colors,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1696 legend: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1697 container: $('useless-invisible-element-that-does-not-even-exist'),
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1698 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1699 grid: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1700 hoverable: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1701 borderWidth: 1,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1702 autoHighlight: false,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1703 mouseActiveRadius: 1000
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1704 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1705 yaxis: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1706 min: Math.pow(10, gc.minPow),
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1707 // max: gc.maxY,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1708 labelWidth: 120,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1709 reserveSpace: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1710 lineWidth: 0.5,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1711 color: '#000',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1712 tickFormatter: windowsTickFormatter,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1713 minTickSize: 1,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1714 ticks: gc.ticks,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1715
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1716 transform: function(v) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1717 return Math.log(v + 0.0001)/move away from zero/ / Math.log(10);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1718 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1719 inverseTransform: function(v) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1720 return Math.pow(v, 10);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1721 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1722 tickDecimals: 3
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1723 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1724 xaxis: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1725 min: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1726 max: 100,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1727 lineWidth: 0.5,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1728 color: '#000',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1729 tickFormatter: function (val, axis) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1730 if (val == 100) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1731 return ' 100%<span class="rhs"> </span>GC'
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1732 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1733 return val;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1734 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1735 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1736 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1737 minTickSize: 1
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1738 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1739 );
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1740
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1741 var firstLabel = $('.yAxis .tickLabel').last();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1742 firstLabel.append(' windows');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1743 bindTip(gc.placeholder, series, gc.plot, toPrettyString, 1, '% GC', 'top right');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1744 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1745
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1746
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1747 function setLogScale() {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1748 gc.normal_scale_el = normal_scale_a;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1749 gc.log_scale_el = log_scale_span;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1750 gc.showWithData = showInLogarithmicScaleWithData;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1751
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1752 $('#normal_scale_label').html(gc.normal_scale_el);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1753 $('#log_scale_label').html(gc.log_scale_el);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1754 showPlotWithInfo(gc, 0);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1755 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1756
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1757
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1758 function setNormalScale() {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1759 gc.normal_scale_el = normal_scale_span;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1760 gc.log_scale_el = log_scale_a;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1761 gc.showWithData = showInNormalScaleWithData;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1762
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1763 $('#normal_scale_label').html(gc.normal_scale_el);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1764 $('#log_scale_label').html(gc.log_scale_el);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1765 showPlotWithInfo(gc, 0);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1766 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1767
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1768
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1769
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1770 function filterAndSumGcInfo(GC_info, condition) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1771 var contigs_lengths_cur_bin = [];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1772 for (var j = 0; j < GC_info.length; j++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1773 var GC = GC_info[j];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1774 var contig_length = GC[0];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1775 var GC_percent = GC[1];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1776
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1777 if (condition(GC_percent) == true) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1778 contigs_lengths_cur_bin.push(contig_length);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1779 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1780 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1781 var val_bp = 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1782 for (var j = 0; j < contigs_lengths_cur_bin.length; j++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1783 val_bp += contigs_lengths_cur_bin[j];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1784 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1785 return val_bp;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1786 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1787
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1788 function createLegend(labels, colors, index, reference) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1789 var selectedAssemblies = getSelectedAssemblies(labels);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1790 $('#legend-placeholder').empty();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1791 var selectors = "";
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1792
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1793 labels.forEach(function(label, i) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1794 var link = index ? '' : '<span id="' + labels[i] + '-switch"' + "class='plot-gc-type-switch dotted-link'>by contigs<br></span><br>";
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1795 var assemblyIdx = gc.filenames.indexOf(label);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1796 addLabelToLegend(assemblyIdx, label, selectedAssemblies, colors, link);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1797 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1798 if (reference) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1799 isChecked = (selectedAssemblies.length > 0 && selectedAssemblies.indexOf(gc.filenames.length.toString())) != -1 ? 'checked="checked"' : "";
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1800 $('#legend-placeholder').append(
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1801 '<div id="reference-label">' +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1802 '<label for="reference" style="color: #000000;">' +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1803 '<input type="checkbox" name="' + gc.filenames.length +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1804 '" checked="' + isChecked + '" id="reference"> ' + 'reference' +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1805 '</label>' +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1806 '</div>'
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1807 );
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1808 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1809 if (index > 0) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1810 for (var filenames_n = 0; filenames_n < gc.filenames.length; filenames_n++){
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1811 selectors += '<br><span id="' + gc.filenames[filenames_n] + '-switch" ' +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1812 "class='plot-switch dotted-link'>" +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1813 gc.filenames[filenames_n] + "</span>";
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1814 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1815 $('#legend-placeholder').append(
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1816 "<br><br><div id='change-assembly' style='margin-right: 3px;'>" +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1817 "<span id='show_all_label'>" +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1818 gc.show_all_el +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1819 "</span><br>" + selectors +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1820 "</div>"
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1821 );
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1822 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1823 addLinksToSwitches(index - 1);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1824 addLegendClickEvents(gc, gc.series.length, showPlotWithInfo, false, index);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1825 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1826
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1827 function addLinksToSwitches(index) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1828 var filenames = gc.filenames;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1829 for (filenames_n = 0; filenames_n < filenames.length; filenames_n++){
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1830 var switchSpan = document.getElementById(filenames[filenames_n] + "-switch");
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1831 $(switchSpan).click(getToggleSwitchFunction(filenames_n + 1));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1832 if (filenames_n == index) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1833 switchSpan.className = 'plot-switch selected-switch gc';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1834 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1835 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1836 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1837
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1838 function getToggleSwitchFunction(index) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1839 return function() {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1840 if (index > 0) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1841 showPlot(index);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1842 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1843 else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1844 showAll();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1845 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1846 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1847 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1848 </script>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1849
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1850 <script type="text/javascript">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1851
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1852 var frc = {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1853 genes: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1854 isInitialized: false,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1855
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1856 maxY: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1857 maxYTick: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1858 series: null,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1859 showWithData: null,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1860
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1861 yAxisLabeled: false
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1862 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1863
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1864 operons: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1865 isInitialized: false,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1866
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1867 maxY: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1868 maxYTick: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1869 series: null,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1870 showWithData: null,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1871
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1872 yAxisLabeled: false
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1873 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1874
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1875 misassemblies: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1876 isInitialized: false,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1877
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1878 maxY: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1879 maxYTick: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1880 series: null,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1881 showWithData: null,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1882
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1883 yAxisLabeled: false
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1884 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1885
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1886 draw: function (name, title, colors, filenames, data, refGenesNumber, tickX,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1887 placeholder, legendPlaceholder, glossary, order, scalePlaceholder) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1888 // div.html(
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1889 // "<span class='plot-header'>" + kind[0].toUpperCase() + kind.slice(1) + "s covered</span>" +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1890 // "<div class='plot-placeholder' id='" + kind + "s-plot-placeholder'></div>"
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1891 // );
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1892 $(scalePlaceholder).empty();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1893
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1894 var info = frc[name];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1895 var coordX = data.coord_x;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1896 var coordY = data.coord_y;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1897
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1898 info.yAxisLabeled = false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1899 var cur_filenames = data.filenames;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1900 if (!info.isInitialized) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1901 var plotsN = cur_filenames.length;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1902 info.series = new Array(plotsN);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1903
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1904 info.maxY = 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1905 info.maxX = 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1906
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1907 for (var i = 0; i < plotsN; i++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1908 var index = $.inArray(cur_filenames[order[i]], filenames);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1909 var plot_coordX = coordX[order[i]];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1910 var plot_coordY = coordY[order[i]];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1911 var featureSpace = plot_coordX[plot_coordX.length - 1];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1912 var maxY = plot_coordY[plot_coordY.length - 1];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1913
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1914 info.series[i] = {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1915 data: [],
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1916 label: filenames[index],
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1917 number: index,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1918 color: colors[index]
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1919 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1920
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1921 info.series[i].data.push([0.0, plot_coordY[0]]);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1922
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1923 if (featureSpace > info.maxX) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1924 info.maxX = featureSpace;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1925 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1926 for (var k = 0; k < plot_coordX.length; k++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1927 info.series[i].data.push([plot_coordX[k], plot_coordY[k]]);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1928 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1929
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1930 if (maxY > info.maxY) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1931 info.maxY = maxY;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1932 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1933 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1934
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1935 for (i = 0; i < plotsN; i++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1936 if (typeof broken_scaffolds_labels !== undefined && $.inArray(filenames[order[i]], broken_scaffolds_labels) != -1) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1937 info.series[i].dashes = {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1938 show: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1939 lineWidth: 1
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1940 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1941 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1942 else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1943 info.series[i].lines = {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1944 show: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1945 lineWidth: 1
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1946 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1947 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1948 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1949
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1950 info.showWithData = function(series, colors) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1951 var plot = $.plot(placeholder, series, {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1952 shadowSize: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1953 colors: colors,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1954 legend: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1955 container: $('useless-invisible-element-that-does-not-even-exist')
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1956 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1957 grid: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1958 borderWidth: 1,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1959 hoverable: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1960 autoHighlight: false,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1961 mouseActiveRadius: 1000,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1962 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1963 yaxis: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1964 min: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1965 max: Math.max(100, info.maxY),
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1966 labelWidth: 145,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1967 reserveSpace: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1968 lineWidth: 0.5,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1969 color: '#000',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1970 tickFormatter: getPercentTickFormatter(Math.max(100, info.maxY)),
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1971 minTickSize: 1
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1972 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1973 xaxis: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1974 min: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1975 max: info.maxX,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1976 lineWidth: 0.5,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1977 color: '#000',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1978 tickFormatter: getJustNumberTickFormatter(info.maxX, ' ' + name),
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1979 minTickSize: tickX
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1980 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1981 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1982
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1983 var firstLabel = $('.yAxis .tickLabel').last();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1984 firstLabel.prepend('Genome coverage<span class="rhs"> </span>=<span class="rhs"> </span>');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1985
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1986 bindTip(placeholder, series, plot, frcNumberToPrettyString, tickX, name, 'bottom right', false, '%');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1987 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1988
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1989 info.isInitialized = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1990 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1991
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1992 addLegendClickEvents(info, filenames.length, showPlotWithInfo, refGenesNumber);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1993 showPlotWithInfo(info);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1994 $('#frc_info').show();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1995 $('.frc_plot_name').html(name);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1996 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1997 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1998
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	1999
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2000
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2001 </script>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2002
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2003 <script type="text/javascript">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2004
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2005 /**********/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2006 /* COLORS */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2007
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2008 // var colors = ["#FF5900", "#008FFF", "#168A16", "#7C00FF", "#00B7FF", "#FF0080", "#7AE01B", "#782400", "#E01B6A"];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2009 var standard_colors = [
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2010 '#FF0000', //red
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2011 '#0000FF', //blue
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2012 '#008000', //green
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2013 '#FFA500', //orange
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2014 '#FF00FF', //fushua
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2015 '#CCCC00', //yellow
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2016 '#800000', //maroon
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2017 '#00CCCC', //aqua
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2018 '#808080', //gray
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2019 '#800080', //purple
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2020 '#808000', //olive
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2021 '#000080', //navy
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2022 '#008080', //team
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2023 '#00FF00', //lime
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2024 ];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2025
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2026 function distinctColors(count) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2027 var colors = [];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2028 for(var hue = 0; hue < 360; hue += 360 / count) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2029 var color = hsvToRgb(hue, 100, 100);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2030 var colorStr = '#' + color[0].toString(16) + color[1].toString(16) + color[2].toString(16);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2031 colors.push();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2032 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2033 return colors;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2034 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2035
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2036 /**************/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2037 /* FORMATTING */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2038 function isIntegral(num) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2039 return num % 1 === 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2040 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2041
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2042 function isFractional(num) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2043 return !isIntegral(num);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2044 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2045
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2046 function getIntervalToPrettyString(interval) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2047 return function(num, unit) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2048 return intervalToPrettyString(interval, num, unit);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2049 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2050 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2051
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2052 function intervalToPrettyString(interval, num, unit) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2053 if (typeof num === 'number') {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2054 var str = toPrettyString(num);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2055 str += '-' + toPrettyString(num + interval);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2056 str += (unit ? '<span class="rhs"> </span>' + unit : '');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2057 return str;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2058 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2059 return num;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2060 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2061 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2062
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2063 function toPrettyString(num, unit) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2064 if (typeof num === 'number') {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2065 var str;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2066 if (num <= 9999) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2067 if (isFractional(num)) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2068 if (isIntegral(num * 10)) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2069 str = num.toFixed(1);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2070 } else if (isIntegral(num * 100) \|\| num >= 100) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2071 str = num.toFixed(2);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2072 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2073 str = num.toFixed(3);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2074 if (str.slice(-1) == '0')
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2075 str = str.slice(0, -1);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2076 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2077 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2078 str = num.toFixed(0);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2079 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2080 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2081 str = num.toFixed(0).replace(/(\d)(?=(\d\d\d)+(?!\d))/g,'$1<span class="hs"></span>');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2082 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2083 str += (unit ? '<span class="rhs"> </span>' + unit : '');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2084 return str;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2085 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2086 return num;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2087 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2088 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2089
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2090 //elif isinstance(value, float):
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2091 // if value == 0.0:
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2092 // return '0'
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2093 // if human_readable:
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2094 // if unit == '%':
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2095 // value *= 100
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2096 // precision = 2
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2097 // for i in range(10, 1, -1):
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2098 // if abs(value) < 1./(10**i):
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2099 // precision = i + 1
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2100 // break
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2101 // return '{value:.{precision}f}{unit_str}'.format(**locals())
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2102 // else:
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2103 // return str(value)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2104
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2105
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2106 function refToPrettyString(num, refs) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2107 return refs[Math.round(num)-1];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2108 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2109
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2110 function ordinalNumberToPrettyString(num, unit, tickX) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2111 num = num * tickX;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2112 var numStr = num.toString();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2113 var lastDigit = numStr[numStr.length-1];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2114 var beforeLastDigit = numStr[numStr.length-2];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2115
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2116 var res = toPrettyString(num);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2117
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2118 if (lastDigit == '1' && beforeLastDigit != '1') {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2119 res += "st";
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2120 } else if (lastDigit == '2' && beforeLastDigit != '1') {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2121 res += "nd";
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2122 } else if (lastDigit == '3' && beforeLastDigit != '1') {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2123 res += "rd";
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2124 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2125 res += 'th';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2126 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2127
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2128 res += (unit ? '<span class="rhs"> </span>' + unit : '');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2129
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2130 return res;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2131 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2132
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2133 function frcNumberToPrettyString(num, unit, tickX, index) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2134 if (index % 2 == 0 && num > 0) num--;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2135 return toPrettyString(num) + ' ' + unit;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2136 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2137
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2138 function getMaxDecimalTick(maxY) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2139 var maxYTick = maxY;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2140 if (maxY <= 100000000000) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2141 maxYTick = Math.ceil((maxY+1)/10000000000)*10000000000;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2142 } if (maxY <= 10000000000) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2143 maxYTick = Math.ceil((maxY+1)/1000000000)*1000000000;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2144 } if (maxY <= 1000000000) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2145 maxYTick = Math.ceil((maxY+1)/100000000)*100000000;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2146 } if (maxY <= 100000000) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2147 maxYTick = Math.ceil((maxY+1)/10000000)*10000000;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2148 } if (maxY <= 10000000) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2149 maxYTick = Math.ceil((maxY+1)/1000000)*1000000;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2150 } if (maxY <= 1000000) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2151 maxYTick = Math.ceil((maxY+1)/100000)*100000;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2152 } if (maxY <= 100000) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2153 maxYTick = Math.ceil((maxY+1)/10000)*10000;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2154 } if (maxY <= 10000) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2155 maxYTick = Math.ceil((maxY+1)/1000)*1000;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2156 } if (maxY <= 1000) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2157 maxYTick = Math.ceil((maxY+1)/100)*100.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2158 } if (maxY <= 100) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2159 maxYTick = Math.ceil((maxY+1)/10)*10.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2160 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2161 return maxYTick;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2162 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2163
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2164 function getBpTickFormatter(maxY, additionalText) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2165 additionalText = additionalText \|\| '';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2166
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2167 return function(val, axis) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2168 var res;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2169 if (val == 0) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2170 res = 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2171
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2172 } else if (axis.max >= 1000000) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2173 res = val / 1000000;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2174
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2175 if (val > axis.max - 1 \|\| val + axis.tickSize >= 1000000000) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2176 res = additionalText + toPrettyString(res, 'Mbp');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2177 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2178 res = toPrettyString(res);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2179 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2180 } else if (axis.max >= 1000) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2181 res = val / 1000;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2182
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2183 if (val > axis.max - 1 \|\| val + axis.tickSize >= 1000000) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2184 res = additionalText + toPrettyString(res, 'kbp');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2185 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2186 res = toPrettyString(res);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2187 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2188 } else if (axis.max >= 1) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2189 res = val;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2190
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2191 if (val > axis.max - 1 \|\| val + axis.tickSize >= 1000) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2192 res = additionalText + toPrettyString(res, 'bp');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2193 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2194 res = toPrettyString(res);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2195 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2196 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2197 return res;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2198 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2199 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2200
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2201 function windowsTickFormatter(v, axis) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2202 return toPrettyString(v);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2203 // var val = v.toFixed(0);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2204 // if (!gc.yAxisLabeled && val > gc.maxY) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2205 // gc.yAxisLabeled = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2206 // var res = val + ' window';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2207 // if (val > 1) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2208 // res += 's'
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2209 // }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2210 // return res;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2211 // } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2212 // return val;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2213 // }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2214 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2215
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2216 function getBpLogTickFormatter(maxY) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2217 return getBpTickFormatter(maxY);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2218 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2219
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2220 function getContigNumberTickFormatter(maxX, tickX) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2221 return function (val, axis) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2222 if (typeof axis.tickSize == 'number' && val > maxX - axis.tickSize) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2223 return "       " + ordinalNumberToPrettyString(val, 'contig', tickX);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2224 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2225 return val * tickX;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2226 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2227 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2228 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2229
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2230 function getJustNumberTickFormatter(maxY, additionalText) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2231 return function (val, axis) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2232 additionalText = additionalText \|\| '';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2233 if (val > axis.max - axis.tickSize) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2234 res = toPrettyString(val) + additionalText;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2235 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2236 res = toPrettyString(val);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2237 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2238 return res;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2239 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2240 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2241
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2242 function getPercentTickFormatter(maxY, additionalText) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2243 return function (val, axis) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2244 additionalText = additionalText \|\| '';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2245 if (val > maxY + 1 \|\| val == 100) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2246 res = additionalText + toPrettyString(val, '%');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2247 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2248 res = toPrettyString(val);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2249 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2250 return res;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2251 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2252 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2253
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2254 function trim(str) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2255 return str.replace(/^\s+/g, '');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2256 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2257
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2258 function initial_spaces_to_nbsp(str, metricName) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2259 if (metricName.length > 0 && metricName[0] == ' ') {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2260 str = '   ' + str;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2261 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2262 return str;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2263 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2264
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2265 function containsObject(obj, list) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2266 var i;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2267 for (i = 0; i < list.length; i++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2268 if (list[i] === obj) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2269 return true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2270 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2271 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2272
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2273 return false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2274 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2275
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2276 function addLegendClickEvents(info, numLegendItems, showPlotWithInfo, showReference, index) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2277 if (showReference) numLegendItems++;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2278 for (var i = 0; i < numLegendItems; i++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2279 $('#legend-placeholder input[name=' + i + ']').click(function() {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2280 showPlotWithInfo(info, index);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2281 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2282 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2283 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2284
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2285 /*********************/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2286 /* GLOSSARY TOOLTIPS */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2287 function addTooltipIfDefinitionExists(glossary, metricName) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2288 metricName = trim(metricName);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2289
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2290 if (containsObject(metricName, Object.keys(glossary))) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2291 return '<a class="tooltip-link" rel="tooltip" title="' +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2292 metricName + ' ' + glossary[metricName] + '">' + metricName + '</a>';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2293 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2294 return metricName;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2295 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2296 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2297
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2298 /*************/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2299 /* PLOT TIPS */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2300 function bindTip(placeholder, series, plot, xToPrettyStringFunction, tickX, xUnit, position, summaryPlots, unitY) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2301 var prevPoint = null;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2302 var prevIndex = null;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2303
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2304 $(placeholder).bind("plothover", function(event, pos, item) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2305 if (dragTable && dragTable.isDragging)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2306 return;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2307
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2308 if (item) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2309 if (prevPoint != item.dataIndex \|\| (summaryPlots && item.seriesIndex != prevIndex)) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2310 prevPoint = item.dataIndex;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2311 prevIndex = item.seriesIndex;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2312 var x = item.datapoint[0];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2313
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2314 showTip(item.pageX, item.pageY, plot.offset(),
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2315 plot.width(), plot.height(),
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2316 series, item.seriesIndex, x, item.dataIndex,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2317 xToPrettyStringFunction(x, xUnit, tickX, item.dataIndex) + ':',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2318 position, summaryPlots, unitY);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2319 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2320 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2321 $('#plot_tip').hide();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2322 $('#plot_tip_vertical_rule').hide();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2323 $('#plot_tip_horizontal_rule').hide();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2324 prevPoint = null;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2325 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2326 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2327 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2328
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2329 function unBindTips(placeholder) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2330 $(placeholder).unbind("plothover");
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2331 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2332
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2333 var tipElementExists = false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2334 function showTip(pageX, pageY, offset, plotWidth, plotHeight,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2335 series, centralSeriesIndex, xPos, xIndex, xStr, position, summaryPlots, unitY) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2336 const LINE_HEIGHT = 16; // pixels
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2337
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2338 position = ((position != null) ? position : 'bottom right');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2339 // pageY -= LINE_HEIGHT * (centralSeriesIndex + 1.5);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2340
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2341 var directions = position.split(' ');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2342
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2343 if (!tipElementExists) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2344 $('<div id="plot_tip" class="white_stroked"></div>').appendTo('body');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2345
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2346 $('<div id="plot_tip_vertical_rule"></div>').css({
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2347 height: plotHeight,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2348 }).appendTo('body');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2349
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2350 $('<div id="plot_tip_horizontal_rule"></div>').css({
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2351 width: plotWidth,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2352 }).appendTo('body');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2353
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2354 tipElementExists = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2355 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2356
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2357 $('#plot_tip').html('').css({
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2358 top: pageY + 5 - ((directions[0] == 'top') ? LINE_HEIGHT * (series.length + 2) : 0),
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2359 left: pageX + 10,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2360 }).show();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2361
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2362 $('#plot_tip_vertical_rule').html('').css({
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2363 top: offset.top,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2364 left: pageX,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2365 }).show();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2366
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2367 $('#plot_tip_horizontal_rule').html('').css({
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2368 top: pageY,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2369 left: offset.left,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2370 }).show();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2371
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2372 $('<div>' + xStr + '</div>').css({
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2373 height: LINE_HEIGHT,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2374 }).appendTo('#plot_tip');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2375
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2376 var sortedYsAndColors = [];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2377 for (var i = 0; i < series.length; i++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2378 if (!summaryPlots \|\| (summaryPlots && series[i].data[xIndex] != undefined && series[i].data[xIndex][1] != null)) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2379 sortedYsAndColors.push({
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2380 y: summaryPlots ? series[i].data[xIndex][1] : (i == centralSeriesIndex ? (series[i].data[xIndex] \|\| series[i].data[series[i].data.length - 1])[1] :
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2381 findNearestPoint(series[i].data, xPos)),
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2382 color: series[i].color,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2383 label: (series[i].isReference ? 'Reference' : series[i].label),
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2384 isCurrent: i == centralSeriesIndex,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2385 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2386 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2387 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2388 sortedYsAndColors.sort(function(a, b) { return a.y < b.y;});
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2389
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2390 for (i = 0; i < sortedYsAndColors.length; i++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2391 var item = sortedYsAndColors[i];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2392
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2393 $('<div id="tip_line' + i + '">' + toPrettyString(item.y) + (unitY ? unitY : '') +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2394 ', <span style="color: ' + item.color + ';">' + item.label + '</span></div>').css({
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2395 height: LINE_HEIGHT,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2396 "font-weight": item.isCurrent ? "bold" : "normal",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2397 }).appendTo('#plot_tip');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2398 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2399 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2400
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2401 function findNearestPoint(points, x) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2402 for (var i = 0; i < points.length; i++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2403 if (points[i][0] >= x) return points[i][1];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2404 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2405 return points[points.length-1][1]
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2406 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2407
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2408 function addLabelToLegend(idx, label, selectedLabels, colors, link) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2409 var isChecked = (selectedLabels.length > 0 && selectedLabels.indexOf(idx.toString())) != -1 ? 'checked="checked"' : "";
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2410 $('#legend-placeholder').append('<div>' +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2411 '<label for="' + label + '" style="color: ' + colors[idx] + '">' +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2412 '<input type="checkbox" name="' + idx + '"' + isChecked + ' id="' + label + '"> ' + label + '</label>' +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2413 (link ? '<br>' + link : '') + '</div>');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2414 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2415
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2416 function getSelectedAssemblies(labels) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2417 var selectedAssemblies = [];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2418 var labelsMatch = false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2419 var legendLabels = [];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2420 $('#legend-placeholder input[type="checkbox"]').each(function() {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2421 legendLabels.push($(this).attr('id'));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2422 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2423 if (labels.every(function(label, i) { return ($.inArray(label, legendLabels) != -1 \|\| label == 'reference')}) ) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2424 labelsMatch = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2425 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2426 if (labelsMatch) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2427 $('#legend-placeholder input:checked[type="checkbox"]').each(function() {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2428 selectedAssemblies.push($(this).attr('name'));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2429 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2430 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2431 else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2432 selectedAssemblies = Array.apply(null, {length: labels}).map(Number.call, Number);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2433 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2434 return selectedAssemblies;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2435 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2436
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2437 // Cookie functions based on http://www.quirksmode.org/js/cookies.html
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2438 // Cookies won't work for local files.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2439
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2440 var createCookie = function(name, value, days) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2441 var expires = '';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2442 if (days) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2443 var date = new Date();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2444 date.setTime(date.getTime() + (days * 24 * 60 * 60 * 1000));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2445 expires = '; expires=' + date.toGMTString();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2446 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2447 var path = document.location.pathname;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2448 document.cookie = name + '=' + value + expires + '; path=' + path;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2449 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2450
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2451 var readCookie = function(name) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2452 var nameEQ = name + '=';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2453 var ca = document.cookie.split(';');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2454 for(var i = 0; i < ca.length; i++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2455 var c = ca[i];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2456 while (c.charAt(0) == ' ') {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2457 c = c.substring(1, c.length);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2458 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2459 if (c.indexOf(nameEQ) == 0) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2460 return c.substring(nameEQ.length, c.length);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2461 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2462 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2463 return null;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2464 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2465
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2466 var eraseCookie = function(name) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2467 createCookie(name, '', -1);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2468 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2469
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2470
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2471 // Dean's forEach: http://dean.edwards.name/base/forEach.js
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2472 /*forEach, version 1.0
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2473 Copyright 2006, Dean Edwards
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2474 License: http://www.opensource.org/licenses/mit-license.php */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2475
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2476 // array-like enumeration
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2477 if (!Array.forEach) { // mozilla already supports this
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2478 Array.forEach = function(array, block, context) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2479 for (var i = 0; i < array.length; i++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2480 block.call(context, array[i], i, array);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2481 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2482 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2483 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2484
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2485 // generic enumeration
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2486 Function.prototype.forEach = function(object, block, context) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2487 for (var key in object) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2488 if (typeof this.prototype[key] == "undefined") {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2489 block.call(context, object[key], key, object);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2490 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2491 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2492 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2493
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2494 // character enumeration
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2495 String.forEach = function(string, block, context) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2496 Array.forEach(string.split(""), function(chr, index) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2497 block.call(context, chr, index, string);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2498 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2499 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2500
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2501 // globally resolve forEach enumeration
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2502 var forEach = function(object, block, context) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2503 if (object) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2504 if (object instanceof Function) { // functions have a "length" property
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2505 Function.forEach(object, block, context);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2506
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2507 } else if (object.each instanceof Function) { // jQuery
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2508 object.each(function(i, elt) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2509 block(elt);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2510 }, context);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2511
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2512 } else if (object.forEach instanceof Function) { // the object implements a custom forEach method
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2513 object.forEach(block, context);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2514
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2515 } else if (typeof object == "string") { // a string
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2516 String.forEach(object, block, context);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2517
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2518 } else if (typeof object.length == "number") { // array-like object
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2519 Array.forEach(object, block, context);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2520
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2521 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2522 Object.forEach(object, block, context);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2523 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2524 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2525 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2526
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2527
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2528 jQuery.fn.exists = function(){
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2529 return jQuery(this).length > 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2530 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2531
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2532
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2533 function Range(from, to) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2534 var r = [];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2535 for (var i = from; i < to; i++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2536 r.push(i);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2537 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2538 return r;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2539 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2540
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2541
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2542
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2543 </script>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2544
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2545 <script type="text/javascript">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2546 /**
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2547 * HSV to RGB color conversion
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2548 *
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2549 * H runs from 0 to 360 degrees
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2550 * S and V run from 0 to 100
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2551 *
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2552 * Ported from the excellent java algorithm by Eugene Vishnevsky at:
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2553 * http://www.cs.rit.edu/~ncs/color/t_convert.html
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2554 */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2555 function hsvToRgb(h, s, v) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2556 var r, g, b;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2557 var i;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2558 var f, p, q, t;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2559
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2560 // Make sure our arguments stay in-range
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2561 h = Math.max(0, Math.min(360, h));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2562 s = Math.max(0, Math.min(100, s));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2563 v = Math.max(0, Math.min(100, v));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2564
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2565 // We accept saturation and value arguments from 0 to 100 because that's
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2566 // how Photoshop represents those values. Internally, however, the
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2567 // saturation and value are calculated from a range of 0 to 1. We make
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2568 // That conversion here.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2569 s /= 100;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2570 v /= 100;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2571
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2572 if(s == 0) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2573 // Achromatic (grey)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2574 r = g = b = v;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2575 return [Math.round(r * 255), Math.round(g * 255), Math.round(b * 255)];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2576 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2577
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2578 h /= 60; // sector 0 to 5
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2579 i = Math.floor(h);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2580 f = h - i; // factorial part of h
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2581 p = v * (1 - s);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2582 q = v * (1 - s * f);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2583 t = v * (1 - s * (1 - f));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2584
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2585 switch(i) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2586 case 0:
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2587 r = v;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2588 g = t;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2589 b = p;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2590 break;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2591
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2592 case 1:
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2593 r = q;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2594 g = v;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2595 b = p;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2596 break;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2597
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2598 case 2:
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2599 r = p;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2600 g = v;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2601 b = t;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2602 break;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2603
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2604 case 3:
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2605 r = p;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2606 g = q;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2607 b = v;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2608 break;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2609
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2610 case 4:
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2611 r = t;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2612 g = p;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2613 b = v;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2614 break;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2615
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2616 default: // case 5:
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2617 r = v;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2618 g = p;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2619 b = q;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2620 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2621
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2622 return [Math.round(r * 255), Math.round(g * 255), Math.round(b * 255)];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2623 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2624
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2625 function hslToRgb(h, s, l){
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2626 var r, g, b;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2627
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2628 if(s == 0) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2629 r = g = b = l; // achromatic
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2630 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2631 function hue2rgb(p, q, t){
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2632 if(t < 0) t += 1;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2633 if(t > 1) t -= 1;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2634 if(t < 1/6) return p + (q - p) * 6 * t;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2635 if(t < 1/2) return q;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2636 if(t < 2/3) return p + (q - p) * (2/3 - t) * 6;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2637 return p;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2638 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2639
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2640 var q = l < 0.5 ? l * (1 + s) : l + s - l * s;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2641 var p = 2 * l - q;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2642 r = hue2rgb(p, q, h + 1/3);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2643 g = hue2rgb(p, q, h);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2644 b = hue2rgb(p, q, h - 1/3);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2645 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2646
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2647 return [Math.round(r * 255), Math.round(g * 255), Math.round(b * 255)];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2648 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2649 </script>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2650
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2651 <script type="text/javascript">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2652
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2653 var gns = {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2654 features: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2655 isInitialized: false,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2656
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2657 maxY: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2658 maxYTick: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2659 series: null,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2660 showWithData: null,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2661
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2662 yAxisLabeled: false
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2663 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2664
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2665 operons: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2666 isInitialized: false,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2667
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2668 maxY: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2669 maxYTick: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2670 series: null,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2671 showWithData: null,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2672
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2673 yAxisLabeled: false
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2674 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2675
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2676 draw: function (name, title, colors, filenames, data, refFeaturesNumber, tickX,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2677 placeholder, legendPlaceholder, glossary, order, scalePlaceholder) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2678 // div.html(
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2679 // "<span class='plot-header'>" + kind[0].toUpperCase() + kind.slice(1) + "s covered</span>" +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2680 // "<div class='plot-placeholder' id='" + kind + "s-plot-placeholder'></div>"
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2681 // );
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2682 $(scalePlaceholder).empty();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2683
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2684 var info = gns[name];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2685
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2686 info.yAxisLabeled = false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2687 var cur_filenames = data.filenames;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2688 if (!info.isInitialized) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2689 var filesFeatureInContigs = data.filesFeatureInContigs;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2690 var kind = data.kind;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2691
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2692 var plotsN = cur_filenames.length;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2693 info.series = new Array(plotsN);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2694
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2695 info.maxY = 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2696 info.maxX = 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2697
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2698 if (refFeaturesNumber) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2699 info.maxY = refFeaturesNumber;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2700 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2701
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2702 for (var fi = 0; fi < plotsN; fi++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2703 var index = $.inArray(cur_filenames[order[fi]], filenames);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2704 var filename = filenames[index];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2705 var featureInContigs = filesFeatureInContigs[filename];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2706
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2707 info.series[fi] = {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2708 data: [[0, 0]],
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2709 label: filenames[index],
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2710 number: index,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2711 color: colors[index]
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2712 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2713
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2714 var contigNo = 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2715 var totalFull = 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2716
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2717 for (var k = 0; k < featureInContigs.length; k++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2718 contigNo += 1;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2719 totalFull += featureInContigs[k];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2720
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2721 info.series[fi].data.push([contigNo, totalFull]);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2722
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2723 if (info.series[fi].data[k][1] > info.maxY) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2724 info.maxY = info.series[fi].data[k][1];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2725 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2726 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2727
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2728 if (featureInContigs.length > info.maxX) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2729 info.maxX = featureInContigs.length;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2730 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2731 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2732
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2733 for (i = 0; i < plotsN; i++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2734 if (typeof broken_scaffolds_labels !== undefined && $.inArray(filenames[order[i]], broken_scaffolds_labels) != -1) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2735 info.series[i].dashes = {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2736 show: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2737 lineWidth: 1
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2738 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2739 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2740 else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2741 info.series[i].lines = {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2742 show: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2743 lineWidth: 1
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2744 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2745 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2746 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2747
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2748 // for (i = 0; i < plotsN; i++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2749 // plotsData[i].points = {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2750 // show: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2751 // radius: 1,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2752 // fill: 1,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2753 // fillColor: false,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2754 // }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2755 // }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2756
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2757 if (refFeaturesNumber) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2758 info.series.push({
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2759 data: [[0, refFeaturesNumber], [info.maxX, refFeaturesNumber]],
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2760 label: 'reference, ' + toPrettyString(refFeaturesNumber, 'features'),
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2761 isReference: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2762 dashes: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2763 show: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2764 lineWidth: 1
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2765 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2766 yaxis: 1,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2767 number: filenames.length,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2768 color: '#000000'
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2769 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2770
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2771 colors.push('#000000');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2772 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2773
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2774 info.showWithData = function(series, colors) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2775 var plot = $.plot(placeholder, series, {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2776 shadowSize: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2777 colors: colors,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2778 legend: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2779 container: $('useless-invisible-element-that-does-not-even-exist'),
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2780 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2781 grid: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2782 borderWidth: 1,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2783 hoverable: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2784 autoHighlight: false,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2785 mouseActiveRadius: 1000,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2786 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2787 yaxis: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2788 min: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2789 // max: info.maxY,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2790 labelWidth: 120,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2791 reserveSpace: true,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2792 lineWidth: 0.5,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2793 color: '#000',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2794 tickFormatter: function (val, axis) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2795 // if (!info.yAxisLabeled && val > info.maxY) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2796 // info.yAxisLabeled = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2797 // var res = val + ' ' + kind;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2798 // if (val > 1) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2799 // res += 's'
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2800 // }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2801 // return res;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2802 // } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2803 return val;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2804 // }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2805 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2806 minTickSize: 1
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2807 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2808 xaxis: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2809 min: 0,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2810 max: info.maxX,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2811 lineWidth: 0.5,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2812 color: '#000',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2813 tickFormatter: getContigNumberTickFormatter(info.maxX, tickX),
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2814 minTickSize: tickX
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2815 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2816 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2817
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2818 var firstLabel = $('.yAxis .tickLabel').last();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2819 firstLabel.append(' ' + name);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2820
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2821 bindTip(placeholder, series, plot, ordinalNumberToPrettyString, tickX, 'contig', 'bottom right');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2822 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2823
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2824 info.isInitialized = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2825 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2826
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2827 addLegendClickEvents(info, filenames.length, showPlotWithInfo, refFeaturesNumber);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2828
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2829 showPlotWithInfo(info);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2830
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2831 $('#contigs_are_ordered').show();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2832 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2833 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2834
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2835
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2836
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2837 </script>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2838
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2839 <script type="text/javascript">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2840 /*
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2841 DT v1.0
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2842 June 26, 2008
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2843 Dan Vanderkam, http://danvk.org/DT/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2844 http://code.google.com/p/DT/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2845
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2846 This is code was based on:
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2847 - Stuart Langridge's SortTable (kryogenix.org/code/browser/sorttable)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2848 - Mike Hall's draggable class (http://www.brainjar.com/dhtml/drag/)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2849 - A discussion of permuting table columns on comp.lang.javascript
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2850
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2851 Licensed under the MIT license.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2852 */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2853
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2854 // Here's the notice from Mike Hall's draggable script:
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2855 //*****************************************************************************
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2856 // Do not remove this notice.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2857 //
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2858 // Copyright 2001 by Mike Hall.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2859 // See http://www.brainjar.com for terms of use.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2860 //*****************************************************************************
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2861
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2862 var classes = {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2863 cell_of_emptySpace: 'cell_of_empty_space',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2864 cell_of_movingTable: 'cell_of_moving_table',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2865 newTable: 'moving_table',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2866 handle: 'drag_handle',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2867 hoveredCell: 'hovered_column_td',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2868 assemblyName: 'assembly_name',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2869
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2870 bottomCell_of_emptySpace: 'bottom_cell_of_empty_space',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2871 topCell_of_emptySpace: 'top_cell_of_empty_space',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2872 leftToCell_of_emptySpace: 'left_to_cell_of_empty_space',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2873 rightToCell_of_emptySpace: 'right_to_cell_of_empty_space',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2874
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2875 mainReportTable_id: 'main_report_table',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2876 totalReportJson_id: 'total-report-json',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2877 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2878
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2879 var dragTable = {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2880 isDragging: false,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2881
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2882 // How far should the mouse move before it's considered a drag, not a click?
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2883 dragRadius2: 0, // 100,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2884 setMinDragDistance: function(x) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2885 DT.dragRadius2 = x * x;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2886 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2887
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2888 // How long should cookies persist? (in days)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2889 cookieDays: 365,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2890 setCookieDays: function(x) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2891 DT.cookieDays = x;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2892 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2893
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2894 // Determine browser and version.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2895 // TODO: eliminate browser sniffing except where it's really necessary.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2896 Browser: function() {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2897 var ua, s, i;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2898
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2899 this.isIE = false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2900 this.isNS = false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2901 this.version = null;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2902 ua = navigator.userAgent;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2903
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2904 s = "MSIE";
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2905 if ((i = ua.indexOf(s)) >= 0) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2906 this.isIE = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2907 this.version = parseFloat(ua.substr(i + s.length));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2908 return;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2909 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2910
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2911 s = "Netscape6/";
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2912 if ((i = ua.indexOf(s)) >= 0) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2913 this.isNS = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2914 this.version = parseFloat(ua.substr(i + s.length));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2915 return;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2916 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2917
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2918 // Treat any other "Gecko" browser as NS 6.1.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2919 s = "Gecko";
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2920 if ((i = ua.indexOf(s)) >= 0) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2921 this.isNS = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2922 this.version = 6.1;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2923 return;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2924 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2925 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2926 browser: null,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2927
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2928 // Detect all draggable tables and attach handlers to their headers.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2929 init: function() {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2930 // Don't initialize twice
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2931 if (arguments.callee.done)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2932 return;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2933 else
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2934 arguments.callee.done = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2935
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2936 // if (_dgtimer)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2937 // clearInterval(_dgtimer);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2938
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2939 if (!document.createElement \|\| !document.getElementsByTagName)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2940 return;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2941
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2942 DT.dragObj.zIndex = 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2943 DT.browser = new DT.Browser();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2944 forEach(document.getElementsByTagName('table'), function(table) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2945 if ($(table).hasClass('draggable')) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2946 DT.makeDraggable(table);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2947 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2948 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2949 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2950
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2951 // The thead business is taken straight from sorttable.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2952 makeDraggable: function(table) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2953 DT.dragObj.table = table;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2954
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2955 if (table.getElementsByTagName('thead').length == 0) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2956 thead = document.createElement('thead');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2957 thead.appendChild(table.rows[0]);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2958 table.insertBefore(thead, table.firstChild);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2959 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2960
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2961 // Safari doesn't support table.tHead, sigh
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2962 if (table.tHead == null) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2963 table.tHead = table.getElementsByTagName('thead')[0];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2964 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2965
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2966 var handles = $('.' + classes.handle) \|\| table.tHead.rows[0].cells;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2967
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2968 forEach(handles, function(handle) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2969 handle.onmousedown = DT.dragStart;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2970 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2971 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2972
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2973 // Global object to hold drag information.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2974 dragObj: {},
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2975
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2976 getEventPosition: function(event) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2977 var x, y;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2978 if (DT.browser.isIE) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2979 x = window.event.clientX + document.documentElement.scrollLeft
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2980 + document.body.scrollLeft;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2981 y = window.event.clientY + document.documentElement.scrollTop
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2982 + document.body.scrollTop;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2983 return {x: x, y: y};
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2984 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2985 return {x: event.pageX, y: event.pageY};
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2986 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2987
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2988 // Determine the position of this element on the page. Many thanks to Magnus
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2989 // Kristiansen for help making this work with "position: fixed" elements.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2990 getPositionOnThePage: function(elt, stopAtRelative) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2991 var ex = 0, ey = 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2992 do {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2993 var curStyle = DT.browser.isIE ? elt.currentStyle
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2994 : window.getComputedStyle(elt, '');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2995 var supportFixed = !(DT.browser.isIE &&
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2996 DT.browser.version < 7);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2997 if (stopAtRelative && curStyle.position == 'relative') {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2998 break;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	2999 } else if (supportFixed && curStyle.position == 'fixed') {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3000 // Get the fixed el's offset
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3001 ex += parseInt(curStyle.left, 10);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3002 ey += parseInt(curStyle.top, 10);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3003 // Compensate for scrolling
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3004 ex += document.body.scrollLeft;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3005 ey += document.body.scrollTop;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3006 // End the loop
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3007 break;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3008 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3009 ex += elt.offsetLeft;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3010 ey += elt.offsetTop;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3011 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3012 } while (elt = elt.offsetParent);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3013 return {x: ex, y: ey};
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3014 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3015
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3016 // MouseDown handler -- sets up the appropriate mousemove/mouseup handlers
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3017 // and fills in the global DT.dragObj object.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3018 dragStart: function(event, id) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3019 DT.isDragging = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3020
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3021 var drag_obj = DT.dragObj;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3022
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3023 var browser = DT.browser;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3024 var clicked_node = browser.isIE ? window.event.srcElement : event.target;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3025 var pos = DT.getEventPosition(event);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3026
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3027 var table = $(clicked_node).closest('table')[0];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3028 var top_cell = $(clicked_node).closest('td, th')[0];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3029 drag_obj.topCell = top_cell;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3030 drag_obj.table = table;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3031
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3032 var col_index = top_cell.cellIndex;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3033 drag_obj.movingColIndex = drag_obj.startIndex = col_index;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3034 drag_obj.movingColWidth = $(top_cell).width();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3035
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3036 // Since a column header can't be dragged directly, duplicate its contents
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3037 // in a div and drag that instead.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3038 var new_table = DT.fullCopy(table, false);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3039
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3040 // Copy the entire column
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3041 var forEachSection = function(table, func) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3042 if (table.tHead) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3043 func(table.tHead);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3044 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3045 forEach(table.tBodies, function(tbody) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3046 func(tbody);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3047 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3048 if (table.tFoot) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3049 func(table.tFoot);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3050 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3051 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3052
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3053 forEachSection(table, function(sec) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3054 var new_sec = DT.fullCopy(sec, false);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3055
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3056 forEach(sec.rows, function(row) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3057 var cell = row.cells[col_index];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3058 var new_tr = DT.fullCopy(row, false);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3059 if (row.offsetHeight) new_tr.style.height = row.offsetHeight + "px";
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3060 var new_td = DT.fullCopy(cell, true);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3061 if (cell.offsetWidth) new_td.style.width = cell.offsetWidth + "px !important";
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3062 new_tr.appendChild(new_td);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3063 new_sec.appendChild(new_tr);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3064 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3065
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3066 new_table.appendChild(new_sec);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3067 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3068
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3069 var obj_pos = DT.getPositionOnThePage(top_cell, true);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3070 new_table.style.position = "absolute";
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3071 new_table.style.left = obj_pos.x + "px";
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3072 new_table.style.top = obj_pos.y + "px";
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3073 // new_table.style.width = dragObj.origNode.offsetWidth + "px";
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3074 // new_table.style.height = dragObj.origNode.offsetHeight + "px";
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3075
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3076 // Hold off adding the element until this is clearly a drag.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3077 drag_obj.addedNode = false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3078
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3079 drag_obj.tableContainer = drag_obj.table.parentNode \|\| document.body;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3080 drag_obj.newTable = new_table;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3081
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3082 // Save starting positions of cursor and element.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3083 drag_obj.startPos = pos;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3084 drag_obj.prevPos = pos;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3085 drag_obj.elStartLeft = parseInt(drag_obj.newTable.style.left, 10);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3086 drag_obj.elStartTop = parseInt(drag_obj.newTable.style.top, 10);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3087
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3088 if (isNaN(drag_obj.elStartLeft)) drag_obj.elStartLeft = 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3089 if (isNaN(drag_obj.elStartTop)) drag_obj.elStartTop = 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3090
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3091 // Update element's z-index.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3092 drag_obj.newTable.style.zIndex = ++drag_obj.zIndex;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3093
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3094 // Capture mousemove and mouseup events on the page.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3095 if (browser.isIE) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3096 document.attachEvent("onmousemove", DT.dragMove);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3097 document.attachEvent("onmouseup", DT.dragEnd);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3098 window.event.cancelBubble = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3099 window.event.returnValue = false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3100 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3101 document.addEventListener("mousemove", DT.dragMove, true);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3102 document.addEventListener("mouseup", DT.dragEnd, true);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3103 event.preventDefault();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3104 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3105 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3106
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3107 // Move the floating column header with the mouse
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3108 // TODO: Reorder columns as the mouse moves for a more interactive feel.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3109 dragMove: function(event) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3110 var x, y;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3111 var drag_obj = DT.dragObj;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3112 var col_index = drag_obj.movingColIndex;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3113
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3114 // Get cursor position with respect to the page.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3115 var pos = DT.getEventPosition(event);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3116
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3117 var full_dx = drag_obj.startPos.x - pos.x;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3118 var full_dy = drag_obj.startPos.y - pos.y;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3119
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3120 if (!drag_obj.addedNode && full_dx * full_dx + full_dy * full_dy > DT.dragRadius2) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3121 // Real dragging has began, the following block performs once
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3122
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3123 // Attach a moving table
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3124 drag_obj.tableContainer.insertBefore(drag_obj.newTable, drag_obj.table);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3125 drag_obj.addedNode = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3126
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3127 // Add classes for the dragged column (original and the clone)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3128 $(drag_obj.newTable).addClass(classes.newTable);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3129 $(DT.getColumn(drag_obj.newTable)).addClass(classes.cell_of_movingTable);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3130
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3131 $(DT.getColumn(drag_obj.table, col_index)).addClass(classes.cell_of_emptySpace);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3132 $(DT.getColumn(drag_obj.table, col_index)[0]).addClass(classes.topCell_of_emptySpace);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3133 var visibleCells = $(DT.getColumn(drag_obj.table, col_index)).filter(':visible');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3134 $(visibleCells[visibleCells.length - 1]).addClass(classes.bottomCell_of_emptySpace);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3135
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3136 DT.addStylesForAdjacentColumns(col_index);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3137 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3138
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3139 // Move drag element by the same amount the cursor has moved.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3140 var style = drag_obj.newTable.style;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3141 style.left = (drag_obj.elStartLeft + pos.x - drag_obj.startPos.x) + "px";
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3142 style.top = (drag_obj.elStartTop + pos.y - drag_obj.startPos.y) + "px";
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3143
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3144 if (DT.browser.isIE) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3145 window.event.cancelBubble = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3146 window.event.returnValue = false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3147 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3148 event.preventDefault();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3149 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3150
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3151 // If moving over an adjacent column, do swapping, swapping with the adjacent column
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3152 var column_pos_x = DT.getPositionOnThePage(DT.getColumn(drag_obj.newTable)[0]).x;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3153 var column_center_x = column_pos_x + drag_obj.movingColWidth / 2;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3154 var hovered_col_index = DT.getColumnAtPosition(drag_obj.table, column_center_x);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3155
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3156 var dx = drag_obj.prevPos.x - pos.x;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3157
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3158 if (DT.isSuitableColumnToSwap(hovered_col_index, col_index)) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3159 if (dx < 0 && hovered_col_index > col_index \|\| // moving right
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3160 dx > 0 && hovered_col_index < col_index) { // moving left
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3161 DT.removeStylesForAdjacentColumns(col_index);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3162 DT.moveColumn(drag_obj.table, col_index, hovered_col_index);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3163 DT.addStylesForAdjacentColumns(hovered_col_index);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3164 drag_obj.movingColIndex = hovered_col_index;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3165 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3166 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3167 drag_obj.prevPos = pos;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3168 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3169
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3170 removeStylesForAdjacentColumns: function(oldIndex) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3171 var table = DT.dragObj.table;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3172 var rows = table.rows;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3173 var oldColumn = DT.getColumn(table, oldIndex);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3174 $(DT.getColumn(table, oldIndex - 1)).removeClass(classes.leftToCell_of_emptySpace);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3175 $(DT.getColumn(table, oldIndex + 1)).removeClass(classes.rightToCell_of_emptySpace);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3176 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3177
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3178 addStylesForAdjacentColumns: function(index) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3179 var table = DT.dragObj.table;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3180 var rows = table.rows;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3181 var column = DT.getColumn(table, index);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3182 $(DT.getColumn(table, index - 1)).addClass(classes.leftToCell_of_emptySpace);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3183 $(DT.getColumn(table, index + 1)).addClass(classes.rightToCell_of_emptySpace);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3184 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3185
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3186 // Stop capturing mousemove and mouseup events.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3187 // Determine which (if any) column we're over and shuffle the table.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3188 dragEnd: function(event) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3189 if (DT.browser.isIE) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3190 document.detachEvent("onmousemove", DT.dragMove);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3191 document.detachEvent("onmouseup", DT.dragEnd);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3192 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3193 document.removeEventListener("mousemove", DT.dragMove, true);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3194 document.removeEventListener("mouseup", DT.dragEnd, true);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3195 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3196
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3197 var drag_obj = DT.dragObj;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3198 var col_index = drag_obj.movingColIndex;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3199
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3200 // If the floating header wasn't added, the mouse didn't move far enough.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3201 if (drag_obj.addedNode) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3202 // TODO: Move with animation
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3203 var final_pos = DT.getPositionOnThePage(DT.getColumn(drag_obj.table, col_index)[0]);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3204
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3205 $(drag_obj.newTable).animate({
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3206 left: final_pos.x,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3207 top: final_pos.y,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3208 }, 'fast', function() {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3209 $(drag_obj.newTable).remove();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3210 $(DT.getColumn(drag_obj.table, col_index)).removeClass(classes.cell_of_emptySpace);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3211 $(DT.getColumn(drag_obj.table, col_index)[0]).removeClass(classes.topCell_of_emptySpace);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3212 var visibleCells = $(DT.getColumn(drag_obj.table, col_index)).filter(':visible');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3213 $(visibleCells[visibleCells.length - 1]).removeClass(classes.bottomCell_of_emptySpace);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3214
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3215 DT.removeStylesForAdjacentColumns(col_index);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3216 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3217
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3218 DT.storeDrag(drag_obj.table);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3219 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3220 DT.isDragging = false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3221 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3222
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3223 moveColumn: function(table, index, nextIndex) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3224 forEach(table.rows, function(row) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3225 var startCell = $(row.cells[index]);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3226 var finishCell = $(row.cells[nextIndex]);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3227
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3228 // startCell.animate({
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3229 // left: finishCell.offset().left,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3230 // }, 'slow', function() {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3231 if (nextIndex > index) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3232 startCell.before(finishCell);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3233 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3234 startCell.after(finishCell);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3235 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3236 // });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3237 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3238 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3239
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3240 // clone an element, copying its style and class.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3241 fullCopy: function(elt, deep) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3242 if (!elt) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3243 return null;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3244 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3245 var new_elt = elt.cloneNode(deep);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3246 new_elt.className = elt.className;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3247 $(new_elt).addClass('clone');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3248 forEach(elt.style, function(value, key, object) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3249 if (value == null) return;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3250 if (typeof(value) == "string" && value.length == 0) return;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3251
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3252 new_elt.style[key] = elt.style[key];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3253 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3254 return new_elt;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3255 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3256
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3257 getColumn: function(table, index) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3258 index = typeof index !== 'undefined' ? index : 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3259
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3260 if (index < 0 \|\| index >= table.rows[0].cells.length) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3261 return [];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3262
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3263 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3264 var column = [];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3265 forEach(table.rows, function(row) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3266 column.push(row.cells[index]);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3267 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3268 return column;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3269 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3270 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3271
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3272 isSuitableColumnToSwap: function(targetIndex, movingColIndex) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3273 if (targetIndex != -1) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3274 if (typeof movingColIndex === 'undefined' \|\| targetIndex != movingColIndex) { // check if equals the moving one
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3275 var top_cell = $(DT.getColumn(DT.dragObj.table, targetIndex)[0]);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3276 if (top_cell.find('.' + classes.handle).addBack('.' + classes.handle).exists()) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3277 return true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3278 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3279 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3280 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3281 return false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3282 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3283
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3284 // Which column does the x value fall inside of? x should include scrollLeft.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3285 getColumnAtPosition: function(table, x) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3286 var header = table.tHead.rows[0].cells;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3287 for (var i = 0; i < header.length; i++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3288 //var left = header[i].offsetLeft;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3289 var pos = DT.getPositionOnThePage(header[i]);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3290 //if (left <= x && x <= left + header[i].offsetWidth) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3291 var px = pos.x;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3292 var ow = header[i].offsetWidth;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3293 var xpow = pos.x + header[i].offsetWidth;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3294 if (pos.x <= x && x <= pos.x + header[i].offsetWidth) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3295 return i;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3296 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3297 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3298 return -1;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3299 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3300
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3301 // Store a column swap in a cookie for posterity.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3302 storeDrag: function(table) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3303 var order = [];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3304 forEach(table.rows[0].cells, function(cell) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3305 var pos = cell.getAttribute('position');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3306 if (pos)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3307 order.push(pos);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3308 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3309
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3310 var order_string = order[0];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3311 for (var i = 1; i < order.length; i++)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3312 order_string += ' ' + order[i];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3313
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3314 DT.storeInCookies(order_string);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3315 DT.sendOrderToServer(order_string);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3316 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3317
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3318 storeInCookies: function(string) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3319 if (navigator.cookieEnabled) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3320 var cookieName = 'order';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3321 createCookie(cookieName, string, DT.cookieDays);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3322 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3323 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3324
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3325 sendOrderToServer: function(string) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3326 if (document.reportId) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3327 $.ajax({
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3328 type: 'GET',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3329 url: '/reorder-report-columns',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3330 dataType: 'json',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3331 data: {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3332 reportId: document.reportId,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3333 order: string,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3334 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3335 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3336 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3337 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3338 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3339
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3340 var DT = dragTable;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3341
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3342 /* ******************************************************************
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3343 Supporting functions: bundled here to avoid depending on a library
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3344 ****************************************************************** */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3345
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3346
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3347 //// Dean Edwards/Matthias Miller/John Resig
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3348 //// has a hook for DT.init already been added? (see below)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3349 //var dgListenOnLoad = false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3350 //
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3351 ///* for Mozilla/Opera9 */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3352 //if (document.addEventListener) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3353 // dgListenOnLoad = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3354 // document.addEventListener("DOMContentLoaded", DT.init, false);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3355 //}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3356 //
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3357 ///* for Internet Explorer */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3358 ///@cc_on @/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3359 ///*@if (@_win32)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3360 // dgListenOnLoad = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3361 // document.write("<script id=__dt_onload defer src=//0)><\/script>");
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3362 // var script = document.getElementById("__dt_onload");
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3363 // script.onreadystatechange = function() {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3364 // if (this.readyState == "complete") {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3365 // DT.init(); // call the onload handler
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3366 // }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3367 // };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3368 ///@end @/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3369 //
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3370 ///* for Safari */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3371 //if (/WebKit/i.test(navigator.userAgent)) { // sniff
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3372 // dgListenOnLoad = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3373 // var _dgtimer = setInterval(function() {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3374 // if (/loaded\|complete/.test(document.readyState)) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3375 // DT.init(); // call the onload handler
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3376 // }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3377 // }, 10);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3378 //}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3379 //
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3380 ///* for other browsers */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3381 ///* Avoid this unless it's absolutely necessary (it breaks sorttable) */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3382 //if (!dgListenOnLoad) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3383 // window.onload = DT.init;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3384 //}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3385
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3386 </script>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3387
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3388 <script type="text/javascript">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3389 /*! HTML5 Shiv vpre3.6 \| @afarkas @jdalton @jon_neal @rem \| MIT/GPL2 Licensed
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3390 Uncompressed source: https://github.com/aFarkas/html5shiv */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3391 (function(a,b){function h(a,b){var c=a.createElement("p"),d=a.getElementsByTagName("head")[0]\|\|a.documentElement;return c.innerHTML="x<style>"+b+"</style>",d.insertBefore(c.lastChild,d.firstChild)}function i(){var a=l.elements;return typeof a=="string"?a.split(" "):a}function j(a){var b={},c=a.createElement,f=a.createDocumentFragment,g=f();a.createElement=function(a){if(!l.shivMethods)return c(a);var f;return b[a]?f=b[a].cloneNode():e.test(a)?f=(b[a]=c(a)).cloneNode():f=c(a),f.canHaveChildren&&!d.test(a)?g.appendChild(f):f},a.createDocumentFragment=Function("h,f","return function(){var n=f.cloneNode(),c=n.createElement;h.shivMethods&&("+i().join().replace(/\w+/g,function(a){return c(a),g.createElement(a),'c("'+a+'")'})+");return n}")(l,g)}function k(a){var b;return a.documentShived?a:(l.shivCSS&&!f&&(b=!!h(a,"article,aside,details,figcaption,figure,footer,header,hgroup,nav,section{display:block}audio{display:none}canvas,video{display:inline-block;display:inline;zoom:1}[hidden]{display:none}audio[controls]{display:inline-block;display:inline;zoom:1}mark{background:#FF0;color:#000}")),g\|\|(b=!j(a)),b&&(a.documentShived=b),a)}var c=a.html5\|\|{},d=/^<\|^(?:button\|form\|map\|select\|textarea\|object\|iframe\|option\|optgroup)$/i,e=/^<\|^(?:a\|b\|button\|code\|div\|fieldset\|form\|h1\|h2\|h3\|h4\|h5\|h6\|i\|iframe\|img\|input\|label\|li\|link\|ol\|option\|p\|param\|q\|script\|select\|span\|strong\|style\|table\|tbody\|td\|textarea\|tfoot\|th\|thead\|tr\|ul)$/i,f,g;(function(){var c=b.createElement("a");c.innerHTML="<xyz></xyz>",f="hidden"in c,f&&typeof injectElementWithStyles=="function"&&injectElementWithStyles("#modernizr{}",function(b){b.hidden=!0,f=(a.getComputedStyle?getComputedStyle(b,null):b.currentStyle).display=="none"}),g=c.childNodes.length==1\|\|function(){try{b.createElement("a")}catch(a){return!0}var c=b.createDocumentFragment();return typeof c.cloneNode=="undefined"\|\|typeof c.createDocumentFragment=="undefined"\|\|typeof c.createElement=="undefined"}()})();var l={elements:c.elements\|\|"abbr article aside audio bdi canvas data datalist details figcaption figure footer header hgroup mark meter nav output progress section summary time video",shivCSS:c.shivCSS!==!1,shivMethods:c.shivMethods!==!1,type:"default",shivDocument:k};a.html5=l,k(b)})(this,document)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3392 </script>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3393
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3394 <script type="text/javascript">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3395 /**
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3396 * Bootstrap.js by @fat & @mdo
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3397 * plugins: bootstrap-tooltip.js
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3398 * Copyright 2012 Twitter, Inc.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3399 * http://www.apache.org/licenses/LICENSE-2.0.txt
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3400 */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3401 !function(a){var b=function(a,b){this.init("tooltip",a,b)};b.prototype={constructor:b,init:function(b,c,d){var e,f;this.type=b,this.$element=a(c),this.options=this.getOptions(d),this.enabled=!0,this.options.trigger!="manual"&&(e=this.options.trigger=="hover"?"mouseenter":"focus",f=this.options.trigger=="hover"?"mouseleave":"blur",this.$element.on(e,this.options.selector,a.proxy(this.enter,this)),this.$element.on(f,this.options.selector,a.proxy(this.leave,this))),this.options.selector?this._options=a.extend({},this.options,{trigger:"manual",selector:""}):this.fixTitle()},getOptions:function(b){return b=a.extend({},a.fn[this.type].defaults,b,this.$element.data()),b.delay&&typeof b.delay=="number"&&(b.delay={show:b.delay,hide:b.delay}),b},enter:function(b){var c=a(b.currentTarget)[this.type](this._options).data(this.type);if(!c.options.delay\|\|!c.options.delay.show)return c.show();clearTimeout(this.timeout),c.hoverState="in",this.timeout=setTimeout(function(){c.hoverState=="in"&&c.show()},c.options.delay.show)},leave:function(b){var c=a(b.currentTarget)[this.type](this._options).data(this.type);this.timeout&&clearTimeout(this.timeout);if(!c.options.delay\|\|!c.options.delay.hide)return c.hide();c.hoverState="out",this.timeout=setTimeout(function(){c.hoverState=="out"&&c.hide()},c.options.delay.hide)},show:function(){var a,b,c,d,e,f,g;if(this.hasContent()&&this.enabled){a=this.tip(),this.setContent(),this.options.animation&&a.addClass("fade"),f=typeof this.options.placement=="function"?this.options.placement.call(this,a[0],this.$element[0]):this.options.placement,b=/in/.test(f),a.remove().css({top:0,left:0,display:"block"}).appendTo(b?this.$element:document.body),c=this.getPosition(b),d=a[0].offsetWidth,e=a[0].offsetHeight;switch(b?f.split(" ")[1]:f){case"bottom":g={top:c.top+c.height,left:c.left+c.width/2-d/2};break;case"top":g={top:c.top-e+4,left:c.left+c.width/2-d/2};break;case"left":g={top:c.top+c.height/2-e/2,left:c.left-d};break;case"right":g={top:c.top+c.height/2-e/2,left:c.left+c.width}}a.css(g).addClass(f).addClass("in")}},isHTML:function(a){return typeof a!="string"\|\|a.charAt(0)==="<"&&a.charAt(a.length-1)===">"&&a.length>=3\|\|/^(?:[^<]<[\w\W]+>[^>]$)/.exec(a)},setContent:function(){var a=this.tip(),b=this.getTitle();a.find(".tooltip-inner")[this.isHTML(b)?"html":"text"](b),a.removeClass("fade in top bottom left right")},hide:function(){function d(){var b=setTimeout(function(){c.off(a.support.transition.end).remove()},500);c.one(a.support.transition.end,function(){clearTimeout(b),c.remove()})}var b=this,c=this.tip();c.removeClass("in"),a.support.transition&&this.$tip.hasClass("fade")?d():c.remove()},fixTitle:function(){var a=this.$element;(a.attr("title")\|\|typeof a.attr("data-original-title")!="string")&&a.attr("data-original-title",a.attr("title")\|\|"").removeAttr("title")},hasContent:function(){return this.getTitle()},getPosition:function(b){return a.extend({},b?{top:0,left:0}:this.$element.offset(),{width:this.$element[0].offsetWidth,height:this.$element[0].offsetHeight})},getTitle:function(){var a,b=this.$element,c=this.options;return a=b.attr("data-original-title")\|\|(typeof c.title=="function"?c.title.call(b[0]):c.title),a},tip:function(){return this.$tip=this.$tip\|\|a(this.options.template)},validate:function(){this.$element[0].parentNode\|\|(this.hide(),this.$element=null,this.options=null)},enable:function(){this.enabled=!0},disable:function(){this.enabled=!1},toggleEnabled:function(){this.enabled=!this.enabled},toggle:function(){this[this.tip().hasClass("in")?"hide":"show"]()}},a.fn.tooltip=function(c){return this.each(function(){var d=a(this),e=d.data("tooltip"),f=typeof c=="object"&&c;e\|\|d.data("tooltip",e=new b(this,f)),typeof c=="string"&&e[c]()})},a.fn.tooltip.Constructor=b,a.fn.tooltip.defaults={animation:!0,placement:"top",selector:!1,template:'<div class="tooltip"><div class="tooltip-arrow"></div><div class="tooltip-inner"></div></div>',trigger:"hover",title:"",delay:0}}(window.jQuery)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3402 </script>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3403
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3404 <script type="text/javascript">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3405 /*!
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3406 * Bootstrap.js by @fat & @mdo
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3407 * Copyright 2012 Twitter, Inc.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3408 * http://www.apache.org/licenses/LICENSE-2.0.txt
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3409 */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3410 !function(a){a(function(){"use strict",a.support.transition=function(){var a=function(){var a=document.createElement("bootstrap"),b={WebkitTransition:"webkitTransitionEnd",MozTransition:"transitionend",OTransition:"oTransitionEnd",msTransition:"MSTransitionEnd",transition:"transitionend"},c;for(c in b)if(a.style[c]!==undefined)return b[c]}();return a&&{end:a}}()})}(window.jQuery),!function(a){"use strict";var b='[data-dismiss="alert"]',c=function(c){a(c).on("click",b,this.close)};c.prototype.close=function(b){function f(){e.trigger("closed").remove()}var c=a(this),d=c.attr("data-target"),e;d\|\|(d=c.attr("href"),d=d&&d.replace(/.(?=#[^\s]$)/,"")),e=a(d),b&&b.preventDefault(),e.length\|\|(e=c.hasClass("alert")?c:c.parent()),e.trigger(b=a.Event("close"));if(b.isDefaultPrevented())return;e.removeClass("in"),a.support.transition&&e.hasClass("fade")?e.on(a.support.transition.end,f):f()},a.fn.alert=function(b){return this.each(function(){var d=a(this),e=d.data("alert");e\|\|d.data("alert",e=new c(this)),typeof b=="string"&&e[b].call(d)})},a.fn.alert.Constructor=c,a(function(){a("body").on("click.alert.data-api",b,c.prototype.close)})}(window.jQuery),!function(a){"use strict";var b=function(b,c){this.$element=a(b),this.options=a.extend({},a.fn.button.defaults,c)};b.prototype.setState=function(a){var 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6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3411 </script>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3412
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3413 <script type="text/javascript">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3414 /* ===========================================================
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3415 * bootstrap-tooltip.js v2.0.4
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3416 * http://twitter.github.com/bootstrap/javascript.html#tooltips
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3417 * Inspired by the original jQuery.tipsy by Jason Frame
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3418 * ===========================================================
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3419 * Copyright 2012 Twitter, Inc.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3420 *
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3421 * Licensed under the Apache License, Version 2.0 (the "License");
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3422 * you may not use this file except in compliance with the License.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3423 * You may obtain a copy of the License at
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3424 *
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3425 * http://www.apache.org/licenses/LICENSE-2.0
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3426 *
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3427 * Unless required by applicable law or agreed to in writing, software
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3428 * distributed under the License is distributed on an "AS IS" BASIS,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3429 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3430 * See the License for the specific language governing permissions and
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3431 * limitations under the License.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3432 * ========================================================== */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3433
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3434
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3435 !function ($) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3436
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3437 "use strict"; // jshint ;_;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3438
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3439
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3440 /* TOOLTIP PUBLIC CLASS DEFINITION
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3441 * =============================== */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3442
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3443 var Tooltip = function (element, options) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3444 this.init('tooltip', element, options)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3445 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3446
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3447 Tooltip.prototype = {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3448
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3449 constructor: Tooltip
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3450
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3451 , init: function (type, element, options) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3452 var eventIn
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3453 , eventOut;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3454
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3455 this.type = type;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3456 this.$element = $(element);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3457 this.options = this.getOptions(options);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3458 this.enabled = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3459
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3460 if (this.options.trigger != 'manual') {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3461 eventIn = this.options.trigger == 'hover' ? 'mouseenter' : 'focus';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3462 eventOut = this.options.trigger == 'hover' ? 'mouseleave' : 'blur';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3463 this.$element.on(eventIn, this.options.selector, $.proxy(this.enter, this));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3464 this.$element.on(eventOut, this.options.selector, $.proxy(this.leave, this));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3465 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3466
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3467 this.options.selector ?
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3468 (this._options = $.extend({}, this.options, { trigger: 'manual', selector: '' })) :
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3469 this.fixTitle();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3470 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3471
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3472 , getOptions: function (options) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3473 options = $.extend({}, $.fn[this.type].defaults, options, this.$element.data())
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3474
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3475 if (options.delay && typeof options.delay == 'number') {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3476 options.delay = {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3477 show: options.delay
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3478 , hide: options.delay
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3479 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3480 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3481
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3482 return options;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3483 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3484
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3485 , enter: function (e) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3486 if (dragTable && dragTable.isDragging)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3487 return;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3488
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3489 var self = $(e.currentTarget)[this.type](this._options).data(this.type);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3490
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3491 if (!self.options.delay \|\| !self.options.delay.show) self.show();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3492
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3493 clearTimeout(this.timeout);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3494 self.hoverState = 'in';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3495 this.timeout = setTimeout(
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3496 function() { if (self.hoverState == 'in') self.show(); },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3497 self.options.delay.show
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3498 );
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3499 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3500
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3501 , leave: function (e) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3502 var self = $(e.currentTarget)[this.type](this._options).data(this.type);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3503
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3504 if (this.timeout) clearTimeout(this.timeout);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3505 if (!self.options.delay \|\| !self.options.delay.hide) self.hide();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3506
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3507 self.hoverState = 'out';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3508 this.timeout = setTimeout(
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3509 function() { if (self.hoverState == 'out') self.hide() },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3510 self.options.delay.hide
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3511 );
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3512 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3513
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3514 , show: function () {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3515 var $tip
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3516 , inside
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3517 , pos
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3518 , actualWidth
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3519 , actualHeight
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3520 , placement
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3521 , tp;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3522
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3523 if (this.hasContent() && this.enabled) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3524 $tip = this.tip();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3525 this.setContent();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3526
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3527 if (this.options.animation) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3528 $tip.addClass('fade');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3529 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3530
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3531 placement = typeof this.options.placement == 'function' ?
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3532 this.options.placement.call(this, $tip[0], this.$element[0]) :
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3533 this.options.placement;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3534
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3535 inside = /in/.test(placement);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3536
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3537 $tip
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3538 .remove()
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3539 .css({ top: 0, left: 0, display: 'block' })
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3540 .appendTo(inside ? this.$element : document.body);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3541
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3542 pos = this.getPosition(inside);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3543
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3544 actualWidth = $tip[0].offsetWidth;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3545 actualHeight = $tip[0].offsetHeight;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3546
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3547 switch (inside ? placement.split(' ')[1] : placement) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3548 case 'bottom':
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3549 tp = {top: pos.top + pos.height, left: pos.left + pos.width / 2 - actualWidth / 2};
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3550 break;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3551 case 'top': // modificated by Vlad Saveliev: +4px to top position
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3552 tp = {top: pos.top - actualHeight + 4, left: pos.left + pos.width / 2 - actualWidth / 2};
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3553 break;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3554 case 'left':
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3555 tp = {top: pos.top + pos.height / 2 - actualHeight / 2, left: pos.left - actualWidth};
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3556 break;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3557 case 'right':
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3558 tp = {top: pos.top + pos.height / 2 - actualHeight / 2, left: pos.left + pos.width};
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3559 break;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3560 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3561
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3562 $tip
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3563 .css(tp)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3564 .addClass(placement)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3565 .addClass('in');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3566 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3567 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3568
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3569 , isHTML: function(text) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3570 // html string detection logic adapted from jQuery
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3571 return typeof text != 'string'
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3572 \|\| ( text.charAt(0) === "<"
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3573 && text.charAt( text.length - 1 ) === ">"
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3574 && text.length >= 3
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3575 ) \|\| /^(?:[^<]<[\w\W]+>[^>]$)/.exec(text);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3576 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3577
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3578 , setContent: function () {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3579 var $tip = this.tip()
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3580 , title = this.getTitle();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3581
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3582 $tip.find('.tooltip-inner')[this.isHTML(title) ? 'html' : 'text'](title);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3583 $tip.removeClass('fade in top bottom left right');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3584 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3585
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3586 , hide: function () {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3587 var that = this
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3588 , $tip = this.tip();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3589
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3590 $tip.removeClass('in');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3591
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3592 function removeWithAnimation() {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3593 var timeout = setTimeout(function () {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3594 $tip.off($.support.transition.end).remove()
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3595 }, 500);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3596
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3597 $tip.one($.support.transition.end, function () {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3598 clearTimeout(timeout);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3599 $tip.remove();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3600 })
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3601 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3602
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3603 $.support.transition && this.$tip.hasClass('fade') ?
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3604 removeWithAnimation() :
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3605 $tip.remove()
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3606 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3607
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3608 , fixTitle: function () {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3609 var $e = this.$element;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3610 if ($e.attr('title') \|\| typeof($e.attr('data-original-title')) != 'string') {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3611 $e.attr('data-original-title', $e.attr('title') \|\| '').removeAttr('title');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3612 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3613 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3614
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3615 , hasContent: function () {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3616 return this.getTitle();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3617 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3618
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3619 , getPosition: function (inside) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3620 return $.extend({}, (inside ? {top: 0, left: 0} : this.$element.offset()), {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3621 width: this.$element[0].offsetWidth
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3622 , height: this.$element[0].offsetHeight
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3623 })
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3624 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3625
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3626 , getTitle: function () {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3627 var title
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3628 , $e = this.$element
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3629 , o = this.options;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3630
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3631 title = $e.attr('data-original-title')
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3632 \|\| (typeof o.title == 'function' ? o.title.call($e[0]) : o.title);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3633
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3634 return title;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3635 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3636
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3637 , tip: function () {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3638 return this.$tip = this.$tip \|\| $(this.options.template);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3639 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3640
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3641 , validate: function () {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3642 if (!this.$element[0].parentNode) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3643 this.hide();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3644 this.$element = null;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3645 this.options = null;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3646 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3647 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3648
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3649 , enable: function () {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3650 this.enabled = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3651 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3652
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3653 , disable: function () {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3654 this.enabled = false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3655 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3656
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3657 , toggleEnabled: function () {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3658 this.enabled = !this.enabled;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3659 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3660
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3661 , toggle: function () {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3662 this[this.tip().hasClass('in') ? 'hide' : 'show']();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3663 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3664
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3665 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3666
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3667
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3668 /* TOOLTIP PLUGIN DEFINITION
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3669 * ========================= */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3670
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3671 $.fn.tooltip = function ( option ) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3672 return this.each(function () {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3673 var $this = $(this)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3674 , data = $this.data('tooltip')
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3675 , options = typeof option == 'object' && option;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3676 if (!data) $this.data('tooltip', (data = new Tooltip(this, options)));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3677 if (typeof option == 'string') data[option]();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3678 })
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3679 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3680
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3681 $.fn.tooltip.Constructor = Tooltip;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3682
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3683 $.fn.tooltip.defaults = {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3684 animation: true
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3685 , placement: 'top'
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3686 , selector: false
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3687 , template: '<div class="tooltip"><div class="tooltip-arrow"></div><div class="tooltip-inner"></div></div>'
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3688 , trigger: 'hover'
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3689 , title: ''
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3690 , delay: 0
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3691 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3692
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3693 }(window.jQuery);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3694
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3695 </script>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3696
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3697 <script type="text/javascript">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3698 function showPlotWithInfo(info, index) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3699 var newSeries = [];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3700 var newColors = [];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3701 var oldSeries = info.series;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3702 var usingSeries;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3703 var sortOrder;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3704 if ($("input[name=sortRefs]")[0])
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3705 sortOrder = getSortOrder();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3706 if (index != undefined) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3707 oldSeries = info.series[index];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3708 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3709 if (sortOrder == 'alphabet') {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3710 usingSeries = [];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3711 sortedRefs = info.references.slice(0).sort();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3712 for(var i = 0; i < oldSeries.length; i++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3713 usingSeries.push($.extend(true, {}, oldSeries[i]));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3714 for(var j = 0; j < info.references.length; j++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3715 usingSeries[i].data[j][1] = oldSeries[i].data[info.references.indexOf(sortedRefs[j])][1];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3716 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3717 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3718 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3719 else usingSeries = oldSeries;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3720 $('#legend-placeholder').find('input[type="checkbox"]:checked').each(function() {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3721 var number = $(this).attr('name');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3722 if (number && usingSeries && usingSeries.length > 0) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3723 var i = 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3724 do {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3725 var series = usingSeries[i];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3726 i++;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3727 } while (i <= usingSeries.length && (series == null \|\| series.number != number));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3728 //
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3729 if (i <= usingSeries.length) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3730 newSeries.push(series);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3731 newColors.push(series.color);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3732 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3733 console.log('no series with number ' + number);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3734 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3735 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3736 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3737 if (sortOrder) sortReferences(sortOrder, info);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3738
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3739 if (newSeries.length === 0) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3740 newSeries.push({
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3741 data: []
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3742 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3743 newColors.push('#FFF');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3744 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3745
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3746 info.showWithData(newSeries, newColors);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3747 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3748
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3749 function recoverOrderFromCookies() {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3750 if (!navigator.cookieEnabled)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3751 return null;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3752
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3753 var order_string = readCookie("order");
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3754 if (!order_string)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3755 return null;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3756
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3757 var order = [];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3758 var fail = false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3759 forEach(order_string.split(' '), function(val) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3760 val = parseInt(val);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3761 if (isNaN(val))
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3762 fail = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3763 else
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3764 order.push(val);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3765 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3766
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3767 if (fail)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3768 return null;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3769
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3770 return order;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3771 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3772
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3773
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3774 function readJson(what) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3775 var result;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3776 try {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3777 result = JSON.parse($('#' + what + '-json').html());
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3778 } catch (e) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3779 result = null;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3780 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3781 return result;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3782 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3783
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3784
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3785 function getToggleFunction(assembliesNames, order, name, title, drawPlot, data, refPlotValue, tickX) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3786 return function() {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3787 this.parentNode.getElementsByClassName('selected-switch')[0].className = 'plot-switch dotted-link';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3788 this.className = 'plot-switch selected-switch';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3789 togglePlots(assembliesNames, order, name, title, drawPlot, data, refPlotValue, tickX)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3790 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3791 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3792
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3793 function togglePlots(assembliesNames, order, name, title, drawPlot, data, refPlotValue, tickX) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3794 var plotPlaceholder = document.getElementById('plot-placeholder');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3795 var legendPlaceholder = document.getElementById('legend-placeholder');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3796 var scalePlaceholder = document.getElementById('scale-placeholder');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3797
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3798 var glossary = JSON.parse($('#glossary-json').html());
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3799
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3800 if (name === 'cumulative') {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3801 $(plotPlaceholder).addClass('cumulative-plot-placeholder');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3802 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3803 $(plotPlaceholder).removeClass('cumulative-plot-placeholder');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3804 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3805
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3806 $('#contigs_are_ordered').hide();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3807 $('#gc_info').hide();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3808 $('#gc_contigs_info').hide();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3809 $('#frc_info').hide();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3810
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3811 var selectedAssemblies = getSelectedAssemblies(assembliesNames);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3812 var sortBtnClass;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3813 if ($("input[name=sortRefs]")[0]) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3814 sortBtnClass = getSortRefsRule();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3815 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3816 $('#legend-placeholder').empty();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3817 assembliesNames.forEach(function(filename, i) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3818 addLabelToLegend(i, filename, selectedAssemblies, colors);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3819 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3820 if (refPlotValue) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3821 $('#legend-placeholder').append(
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3822 '<div id="reference-label">' +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3823 '<label for="reference" style="color: #000000;">' +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3824 '<input type="checkbox" name="' + assembliesNames.length +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3825 '" checked="checked" id="reference"> ' + 'reference' +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3826 '</label>' +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3827 '</div>'
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3828 );
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3829 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3830 if (sortBtnClass) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3831 addSortRefsBtn(sortBtnClass);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3832 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3833
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3834 drawPlot(name, title, colors, assembliesNames, data, refPlotValue, tickX,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3835 plotPlaceholder, legendPlaceholder, glossary, order, scalePlaceholder);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3836 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3837
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3838 function makePlot(firstPlot, assembliesNames, order, name, title, drawPlot, data, refPlotValue, tickX) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3839 var switchSpan = document.createElement('span');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3840 switchSpan.id = name + '-switch';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3841 switchSpan.innerHTML = title;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3842 var plotsSwitchesDiv = document.getElementById('plots-switches');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3843 plotsSwitchesDiv.appendChild(switchSpan);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3844
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3845 if (firstPlot) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3846 switchSpan.className = 'plot-switch selected-switch';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3847 togglePlots(assembliesNames, order, name, title, drawPlot, data, refPlotValue, tickX);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3848 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3849 switchSpan.className = 'plot-switch dotted-link';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3850 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3851
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3852 $(switchSpan).click(getToggleFunction(assembliesNames, order, name, title, drawPlot, data, refPlotValue, tickX));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3853 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3854 </script>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3855
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3856 <script type="text/javascript">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3857 String.prototype.trunc =
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3858 function(n){
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3859 return this.substr(0, n-1) + (this.length > n ? '…' : '');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3860 };
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3861
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3862
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3863 function getColor (hue, lightness) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3864 lightness = lightness ? lightness : 92;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3865 var rgb = hslToRgb(hue / 360, 0.8, lightness / 100);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3866 return '#' + rgb[0].toString(16) + rgb[1].toString(16) + rgb[2].toString(16);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3867 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3868
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3869 function getMedian (x) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3870 if (x.length == 0) return null;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3871 if (x.length % 2 == 1) return x[(x.length - 1) / 2];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3872 else return (x[(x.length / 2) - 1] + x[(x.length / 2)]) / 2;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3873 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3874
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3875 function toggleSecondary(event, caller) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3876 event = event \|\| window.event;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3877 if(event.target.nodeName == "IMG") return;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3878 if (!caller.hasClass('primary') \|\| caller.hasClass('not_extend')) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3879 return;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3880 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3881 var nextRow = caller.next('.content-row');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3882 $(caller).find('.metric-name').toggleClass('collapsed').toggleClass('expanded');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3883
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3884 while (!nextRow.hasClass('primary') && (nextRow.length > 0)) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3885 nextRow.toggleClass('secondary_hidden');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3886 nextRow.find('.left_column_td').css('background-color', '#E8E8E8');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3887 nextRow = nextRow.next('.content-row');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3888 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3889 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3890
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3891 function setUpHeatMap(table) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3892
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3893 (function () {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3894 $(function () {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3895 $('tr.group_empty').removeClass('row_hidden');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3896 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3897 })();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3898
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3899 $('#main_report').append(table);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3900 var rows = $('#main_report_table').find('.content-row');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3901 var showHeatmap = false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3902 for (var rows_n = 0; rows_n < rows.length; rows_n++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3903 if ($(rows[rows_n]).find('td[number]').length > 1) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3904 showHeatmap = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3905 break
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3906 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3907 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3908
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3909 if (showHeatmap) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3910 var canvas = document.getElementById('gradientHeatmap');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3911 var context = canvas.getContext('2d');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3912 context.rect(0, 0, canvas.width, canvas.height);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3913
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3914 var gradient = context.createLinearGradient(0, 0, canvas.width, canvas.height);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3915 gradient.addColorStop(0, getColor(0, 65));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3916 gradient.addColorStop(0.5, 'white');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3917 gradient.addColorStop(1, getColor(240, 65));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3918 canvas.style.border = "0px solid rgba(0, 0, 0, .1)";
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3919 context.fillStyle = gradient;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3920 context.fill();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3921 $('#heatmaps_chbox').change(function(){
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3922 if($(this).is(':checked')) toggleHeatMap('on');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3923 else toggleHeatMap('off');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3924 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3925 toggleHeatMap('on');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3926 $('#heatmap_header').show();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3927 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3928 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3929
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3930 function toggleHeatMap(state){
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3931 var rows = $('#main_report_table').find('.content-row');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3932 for (var rows_n = 0; rows_n < rows.length; rows_n++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3933 var cells = $(rows[rows_n]).find('td[number]');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3934 if (state == 'on') {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3935 var quality = $(rows[rows_n]).attr('quality');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3936 heatMapOneRow(cells, quality);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3937 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3938 else cells.each(function (i) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3939 $(this).css('background', 'white');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3940 $(this).css('color', 'black');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3941 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3942 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3943 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3944
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3945 function heatMapOneRow (cells, quality) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3946 if (quality == 'Equal')
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3947 return;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3948 var BLUE_HUE = 240;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3949 var BLUE_OUTER_BRT = 55;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3950 var BLUE_INNER_BRT = 65;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3951
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3952 var RED_HUE = 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3953 var RED_OUTER_BRT = 50;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3954 var RED_INNER_BRT = 60;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3955
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3956 var MIN_NORMAL_BRT = 80;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3957 var MEDIAN_BRT = 100;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3958
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3959 var numbers = $.map(cells, function (cell) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3960 return parseFloat($(cell).attr('number'));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3961 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3962
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3963 var min = Math.min.apply(null, numbers);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3964 var max = Math.max.apply(null, numbers);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3965
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3966 var topHue = BLUE_HUE;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3967 var lowHue = RED_HUE;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3968
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3969 var innerTopBrt = BLUE_INNER_BRT;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3970 var outerTopBrt = BLUE_OUTER_BRT;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3971 var innerLowBrt = RED_INNER_BRT;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3972 var outerLowBrt = RED_OUTER_BRT;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3973
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3974 if (quality == 'Less is better') {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3975 topHue = RED_HUE;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3976 lowHue = BLUE_HUE;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3977
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3978 innerTopBrt = RED_INNER_BRT;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3979 outerTopBrt = RED_OUTER_BRT;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3980 innerLowBrt = BLUE_INNER_BRT;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3981 outerLowBrt = BLUE_OUTER_BRT;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3982 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3983
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3984 var twoCols = cells.length == 2;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3985
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3986 if (max == min) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3987 $(cells).css('color', MEDIAN_BRT);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3988 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3989 var sortedValues = numbers.slice().sort(function(a, b) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3990 return a - b;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3991 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3992 var median = getMedian(sortedValues);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3993 var l = numbers.length;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3994 var q1 = sortedValues[Math.floor((l - 1) / 4)];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3995 var q3 = sortedValues[Math.floor((l - 1) * 3 / 4)];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3996
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3997 var d = q3 - q1;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3998 var low_outer_fence = q1 - 3 * d;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	3999 var low_inner_fence = q1 - 1.5 * d;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4000 var top_inner_fence = q3 + 1.5 * d;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4001 var top_outer_fence = q3 + 3 * d;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4002 cells.each(function (i) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4003 var number = numbers[i];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4004 if (number < low_outer_fence) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4005 $(this).css('background', getColor(lowHue, twoCols ? null : outerLowBrt));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4006 if (twoCols != true) $(this).css('color', 'white');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4007 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4008 else if (number < low_inner_fence) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4009 $(this).css('background', getColor(lowHue, twoCols ? null : innerLowBrt));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4010 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4011 else if (number < median) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4012 var k = (MEDIAN_BRT - MIN_NORMAL_BRT) / (median - low_inner_fence);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4013 var brt = Math.round(MEDIAN_BRT - (median - number) * k);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4014 $(this).css('background', getColor(lowHue, twoCols ? null : brt));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4015 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4016 else if (number > top_inner_fence) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4017 $(this).css('background', getColor(topHue, twoCols ? null : innerTopBrt));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4018 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4019 else if (number > top_outer_fence) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4020 $(this).css('background', getColor(topHue, twoCols ? null : outerTopBrt));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4021 if (twoCols != true) $(this).css('color', 'white');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4022 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4023 else if (number > median) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4024 var k = (MEDIAN_BRT - MIN_NORMAL_BRT) / (top_inner_fence - median);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4025 var brt = Math.round(MEDIAN_BRT - (number - median) * k);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4026 $(this).css('background', getColor(topHue, twoCols ? null : brt));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4027 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4028 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4029 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4030 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4031 function extendedClick() {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4032 $('.row_to_hide').toggleClass('row_hidden');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4033
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4034 var link = $('#extended_report_link');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4035 if (link.html() == 'Extended report') {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4036 link.html('Short report');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4037 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4038 link.html('Extended report');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4039 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4040 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4041
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4042 function buildExtendedLinkClick() {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4043 return '<p id="extended_link"><a class="dotted-link" id="extended_report_link" onclick="extendedClick($(this))">Extended report</a></p>';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4044 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4045
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4046 function appendIcarusLinks() {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4047 if (icarusLinks = readJson('icarus')) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4048 if (icarusLinks.links != undefined) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4049 var links = '';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4050 for (var link_n = 0; link_n < icarusLinks.links.length; link_n++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4051 //links += '<a href="' + icarusLinks.links[link_n] + '">' + icarusLinks.links_names[link_n] + '</a><br>'
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4052 links += '<a class="btn btn-default btn-xs" role="button" href="' + icarusLinks.links[link_n] + '">' + icarusLinks.links_names[link_n] + '</a><br>'
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4053 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4054 $('#icarus').html(links);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4055 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4056 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4057 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4058
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4059 </script>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4060
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4061
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4062 <script type="text/javascript">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4063 var colors = ["#FF0000"];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4064 var broken_scaffolds_labels = [];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4065 </script>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4066 <script type="text/javascript">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4067 function addRow(metric, mainMetrics, rowName, group_n, order, glossary, isExpandable, isPrimary) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4068 (function(group_n) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4069 var id_group = '#group_' + group_n;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4070 $(function() {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4071 $(id_group).removeClass('group_empty');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4072 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4073 })(group_n);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4074
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4075 var table = '';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4076 metricName = metric.metricName;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4077 var quality = metric.quality;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4078 var values = metric.values;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4079
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4080 var trClass = 'content-row';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4081 if (metric.isMain \|\| $.inArray(metricName, mainMetrics) > -1) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4082 (function(group_n) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4083 var id_group = '#group_' + group_n;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4084 $(function() {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4085 $(id_group).removeClass('row_hidden');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4086 $(id_group).removeClass('row_to_hide');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4087 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4088 })(group_n);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4089 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4090 trClass = 'content-row row_hidden row_to_hide';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4091 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4092 var tdClass = '';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4093 if (!isPrimary) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4094 trClass += ' secondary_hidden';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4095 tdClass = 'secondary_td';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4096 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4097 else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4098 trClass += ' primary';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4099 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4100 if (isExpandable) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4101 table +=
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4102 '<tr class="' + trClass + '" quality="' + quality + '" onclick="toggleSecondary(event, $(this))">' +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4103 '<td class="left_column_td ' + tdClass + '">' +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4104 '<span class="metric-name expandable collapsed">' +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4105 initial_spaces_to_nbsp(addTooltipIfDefinitionExists(glossary, rowName.trunc(55)), metricName) +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4106 '</span></td>';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4107 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4108 else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4109 table +=
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4110 '<tr class="' + trClass + '" quality="' + quality + '">' +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4111 '<td class="left_column_td"><span class="metric-name">' +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4112 initial_spaces_to_nbsp(addTooltipIfDefinitionExists(glossary, rowName.trunc(55)), metricName) +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4113 '</span>' +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4114 '</td>';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4115 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4116 for (var val_n = 0; val_n < values.length; val_n++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4117 value = values[order[val_n]];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4118
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4119 if (value === null \|\| value === '') {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4120 table += '<td><span>-</span></td>';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4121 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4122 if (typeof value === 'number') {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4123 table +=
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4124 '<td number="' + value + '"><span>'
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4125 + toPrettyString(value) + '</span></td>';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4126 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4127 var result = /([0-9\.]+)(.*)/.exec(value);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4128 var num = parseFloat(result[1]);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4129 var rest = result[2];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4130 // alert('value = ' + value + ' result = ' + result);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4131
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4132 // var num = parseFloat(value);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4133
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4134 if (num !== null) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4135 table += '<td number="' + num + '"><span>' + toPrettyString(num) + rest + '</span></td>';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4136 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4137 table += '<td><span>' + value + '</span></td>';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4138 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4139 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4140 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4141 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4142 return table;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4143 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4144
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4145 function getSubRows(subReports, groupName, metricName) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4146 rows = [];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4147 if (subReports) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4148 for (var report_n = 0; report_n < subReports.length; report_n++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4149 subReport = subReports[report_n];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4150 for (var group_n = 0; group_n < subReport.length; group_n++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4151 if (subReport[group_n][0] != groupName)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4152 continue;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4153 metrics = subReport[group_n][1];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4154 for (var metric_n = 0; metric_n < metrics.length; metric_n++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4155 if (metrics[metric_n].metricName == metricName)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4156 rows.push(metrics[metric_n])
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4157 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4158 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4159 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4160 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4161 return rows;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4162 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4163
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4164 function buildTotalReport(assembliesNames, totalReport, order, glossary, qualities, mainMetrics) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4165 var report = totalReport.report,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4166 date = totalReport.date,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4167 minContig = totalReport.minContig,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4168 referenceName = totalReport.referenceName,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4169 subReports = totalReport.subreports,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4170 subReferences = totalReport.subreferences;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4171 $('#report_date').html('<p>' + date + '</p>');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4172 var extraInfo = '<p>All statistics are based on contigs of size >= ' + minContig +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4173 '<span class="rhs"> </span>bp, unless otherwise noted (e.g., "# contigs (>= 0 bp)" and "Total length (>= 0 bp)" include all contigs).</p>';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4174 $('#extrainfo').html(extraInfo);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4175 $('#plot-caption').show();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4176
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4177 var table = '';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4178 table += '<table cellspacing="0" class="report_table draggable" id="main_report_table">';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4179
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4180 if (referenceName) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4181 $('#reference_name').show().find('.val').html(referenceName);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4182 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4183
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4184 if (report[0][0] == 'Genome statistics') { // if first section is empty (no reference), swap it and w/o reference statistics
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4185 var genomeMetrics = report[0][1];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4186 var isSectionEmpty = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4187 for (var index = 0; index < genomeMetrics.length; index++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4188 if (genomeMetrics[index].isMain \|\| $.inArray(genomeMetrics[index].metric_name, mainMetrics) > -1)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4189 isSectionEmpty = false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4190 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4191 if (isSectionEmpty) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4192 for (var group_n = 0; group_n < report.length; group_n++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4193 if (report[group_n][0] == 'Statistics without reference') {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4194 report[0] = report.splice(group_n, 1, report[0])[0];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4195 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4196 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4197 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4198 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4199
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4200 for (var group_n = 0; group_n < report.length; group_n++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4201 var group = report[group_n];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4202 var groupName = group[0];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4203 var metrics = group[1];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4204 var width = assembliesNames.length + 1;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4205
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4206 if (groupName == 'Reference statistics') {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4207 var referenceValues = {};
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4208 for (var metric_n = 0; metric_n < metrics.length; metric_n++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4209 var metric = metrics[metric_n];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4210 var metricName = metric.metricName;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4211 var value = metric.values[0];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4212 referenceValues[metricName] = value;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4213 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4214 var refLen = referenceValues['Reference length'];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4215 var refFragments = referenceValues['Reference fragments'];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4216 var refGC = referenceValues['Reference GC (%)'];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4217 var refFeatures = referenceValues['Reference genomic features'];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4218 var refOperons = referenceValues['Reference operons'];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4219 var refChr = referenceValues['Reference chromosomes'];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4220 var totalReads = referenceValues['# total reads'];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4221 var refMappedReads = referenceValues['Reference mapped (%)'];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4222 var refPairedReads = referenceValues['Reference properly paired (%)'];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4223 var estRefLen = referenceValues['Estimated reference length'];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4224
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4225 if (refLen)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4226 $('#reference_length').show().find('.val').html(toPrettyString(refLen));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4227 else if (estRefLen)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4228 $('#est_reference_length').show().find('.val').html(toPrettyString(estRefLen));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4229 if (refFragments) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4230 $('#reference_fragments').show().find('.val').html(refFragments);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4231 if (refFragments > 1)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4232 $('#reference_fragments').find('.plural_ending').show();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4233 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4234 if (refGC)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4235 $('#reference_gc').show().find('.val').html(toPrettyString(refGC));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4236 if (refFeatures)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4237 $('#reference_features').show().find('.val').html(toPrettyString(refFeatures));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4238 if (refOperons)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4239 $('#reference_operons').show().find('.val').html(toPrettyString(refOperons));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4240 if (refChr) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4241 $('#reference_chr').show().find('.val').html(refChr);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4242 if (refChr > 1)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4243 $('#reference_chr').find('.plural_ending').show();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4244 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4245 if (totalReads)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4246 $('#total_reads').show().find('.val').html(toPrettyString(totalReads));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4247 if (refMappedReads !== undefined)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4248 $('#reference_mapped_reads').show().find('.val').html(toPrettyString(refMappedReads));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4249 if (refPairedReads !== undefined)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4250 $('#reference_paired_reads').show().find('.val').html(toPrettyString(refPairedReads));
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4251 continue;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4252 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4253
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4254 if (group_n == 0) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4255 table += '<tr class="top_row_tr"><td id="top_left_td" class="left_column_td"><span>' + groupName + '</span></td>';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4256
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4257 for (var assembly_n = 0; assembly_n < assembliesNames.length; assembly_n++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4258 var assemblyName = assembliesNames[order[assembly_n]];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4259 if (assemblyName.length > 30) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4260 assemblyName =
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4261 '<span class="tooltip-link" rel="tooltip" title="' + assemblyName + '">' +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4262 assemblyName.trunc(30) +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4263 '</span>'
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4264 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4265
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4266 table += '<td class="second_through_last_col_headers_td" position="' + order[assembly_n] + '">' +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4267 '<span class="drag_handle"><span class="drag_image"></span></span>' +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4268 '<span class="assembly_name">' + assemblyName + '</span>' +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4269 '</td>';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4270 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4271
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4272 } else {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4273 table +=
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4274 '<tr class="group_header row_to_hide row_hidden group_empty" id="group_' + group_n + '">' +
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4275 '<td class="left_column_td"><span>' + groupName + '</span></td>'; //colspan="' + width + '"
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4276 for (var i = 1; i < width; i++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4277 table += '<td></td>';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4278 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4279 table += '</tr>';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4280 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4281
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4282 for (metric_n = 0; metric_n < metrics.length; metric_n++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4283 isExpandable = false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4284 isPrimary = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4285 metricName = metrics[metric_n].metricName;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4286 subRows = getSubRows(subReports, groupName, metricName);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4287 if (subRows && subRows.length > 0) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4288 isExpandable = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4289 table += addRow(metrics[metric_n], mainMetrics, metricName, group_n, order, glossary, isExpandable, isPrimary);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4290 for (var rows_n = 0; rows_n < subRows.length; rows_n++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4291 isExpandable = false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4292 isPrimary = false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4293 table += addRow(subRows[rows_n], mainMetrics, subReferences[rows_n], group_n, order, glossary, isExpandable, isPrimary);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4294 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4295 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4296 else table += addRow(metrics[metric_n], mainMetrics, metricName, group_n, order, glossary, isExpandable, isPrimary);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4297 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4298 table += '</tr>';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4299 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4300 table += '</table>';
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4301
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4302 table += buildExtendedLinkClick();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4303
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4304 setUpHeatMap(table);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4305 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4306
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4307 </script>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4308
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4309
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4310 <script type="text/javascript">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4311
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4312 function buildReport() {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4313 var assembliesNames;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4314 var order;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4315
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4316 var totalReport = null;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4317 var qualities = null;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4318 var mainMetrics = null;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4319 var contigsLens = null;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4320 var coordNx = null;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4321 var contigsLensNx = null;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4322 var alignedContigsLens = null;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4323 var refLengths = null;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4324 var contigs = null;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4325 var featuresInContigs = null;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4326 var operonsInContigs = null;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4327 var gcInfos = null;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4328
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4329 var glossary = JSON.parse($('#glossary-json').html());
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4330
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4331 var plotsSwitchesDiv = document.getElementById('plots-switches');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4332 var toRemoveRefLabel = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4333 var firstPlot = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4334
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4335 /****************/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4336 /* Total report */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4337
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4338 if (!(totalReport = readJson('total-report'))) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4339 console.log("Error: cannot read #total-report-json");
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4340 return 1;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4341 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4342
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4343 assembliesNames = totalReport.assembliesNames;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4344
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4345 order = recoverOrderFromCookies() \|\| totalReport.order \|\| Range(0, assembliesNames.length);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4346
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4347 buildTotalReport(assembliesNames, totalReport, order, glossary, qualities, mainMetrics);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4348
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4349 if (refLengths = readJson('reference-length'))
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4350 refLengths = refLengths.reflen;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4351
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4352 /****************/
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4353 /* Plots */
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4354
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4355 while (assembliesNames.length > colors.length) { // colors is defined in utils.js
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4356 colors = colors.concat(colors);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4357 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4358
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4359 $(plotsSwitchesDiv).html('<b>Plots:</b>');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4360
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4361 var selectedAssemblies = Array.apply(null, {length: assembliesNames}).map(Number.call, Number);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4362 assembliesNames.forEach(function(filename, i) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4363 addLabelToLegend(i, filename, selectedAssemblies, colors)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4364 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4365
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4366 var tickX = 1;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4367 if (tickX = readJson('tick-x'))
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4368 tickX = tickX.tickX;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4369
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4370 if (contigsLens = readJson('contigs-lengths')) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4371 makePlot(firstPlot, assembliesNames, order, 'cumulative', 'Cumulative length', cumulative.draw, contigsLens.lists_of_lengths, refLengths, tickX);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4372 firstPlot = false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4373 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4374
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4375 if (coordNx = readJson('coord-nx')) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4376 makePlot(firstPlot, assembliesNames, order, 'nx', 'Nx', nx.draw, {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4377 coord_x: coordNx.coord_x,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4378 coord_y: coordNx.coord_y,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4379 filenames: coordNx.filenames
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4380 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4381 null, null
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4382 );
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4383 firstPlot = false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4384 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4385
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4386 if (coordNx = readJson('coord-nax')) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4387 makePlot(firstPlot, assembliesNames, order, 'nax', 'NAx', nx.draw, {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4388 coord_x: coordNx.coord_x,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4389 coord_y: coordNx.coord_y,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4390 filenames: coordNx.filenames
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4391 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4392 null, null
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4393 );
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4394 firstPlot = false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4395 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4396
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4397 if (coordNx = readJson('coord-ngx')) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4398 makePlot(firstPlot, assembliesNames, order, 'ngx', 'NGx', nx.draw, {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4399 coord_x: coordNx.coord_x,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4400 coord_y: coordNx.coord_y,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4401 filenames: coordNx.filenames
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4402 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4403 null, null
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4404 );
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4405 firstPlot = false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4406 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4407
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4408 if (coordNx = readJson('coord-ngax')) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4409 makePlot(firstPlot, assembliesNames, order, 'ngax', 'NGAx', nx.draw, {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4410 coord_x: coordNx.coord_x,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4411 coord_y: coordNx.coord_y,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4412 filenames: coordNx.filenames
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4413 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4414 null, null
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4415 );
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4416 firstPlot = false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4417 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4418
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4419 if (coordMisassemblies = readJson('coord-misassemblies')) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4420 makePlot(firstPlot, assembliesNames, order, 'misassemblies', 'Misassemblies', frc.draw, {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4421 coord_x: coordMisassemblies.coord_x,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4422 coord_y: coordMisassemblies.coord_y,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4423 filenames: coordMisassemblies.filenames
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4424 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4425 null, 1
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4426 );
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4427 firstPlot = false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4428 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4429
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4430 featuresInContigs = readJson('features-in-contigs');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4431 operonsInContigs = readJson('operons-in-contigs');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4432 // if (genesInContigs \|\| operonsInContigs)
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4433 // contigs = readJson('contigs');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4434
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4435 if (featuresInContigs) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4436 makePlot(firstPlot, assembliesNames, order, 'features', 'Genomic features', gns.draw, {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4437 filesFeatureInContigs: featuresInContigs.features_in_contigs,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4438 kind: 'gene',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4439 filenames: featuresInContigs.filenames
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4440 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4441 featuresInContigs.ref_features_number, tickX
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4442 );
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4443 firstPlot = false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4444 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4445 if (operonsInContigs) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4446 makePlot(firstPlot, assembliesNames, order, 'operons', 'Operons', gns.draw, {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4447 filesFeatureInContigs: operonsInContigs.operons_in_contigs,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4448 kind: 'operon',
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4449 filenames: operonsInContigs.filenames
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4450 },
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4451 operonsInContigs.ref_operons_number, tickX
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4452 );
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4453 firstPlot = false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4454 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4455 gcInfos = readJson('gc');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4456 if (gcInfos && (gcInfos.lists_of_gc_info \|\| gcInfos.list_of_GC_distributions)) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4457 makePlot(firstPlot, assembliesNames, order, 'gc', 'GC content', gc.draw, gcInfos, gcInfos.reference_index);
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4458 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4459
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4460 var noReference = true;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4461 var report = totalReport.report;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4462 for (var group_n = 0; group_n < report.length; group_n++) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4463 var group = report[group_n];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4464 var groupName = group[0];
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4465 if (groupName == 'Reference statistics' && group[1].length > 0) {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4466 noReference = false;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4467 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4468 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4469 if (noReference) extendAll();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4470 appendIcarusLinks();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4471 return 0;
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4472 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4473
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4474 function extendAll() {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4475 $('.row_to_hide').toggleClass('row_hidden');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4476
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4477 var link = $('#extended_report_link');
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4478 link.hide();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4479 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4480 </script>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4481
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4482
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4483 <script type="text/javascript">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4484 $(function() {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4485
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4486 buildReport();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4487
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4488 dragTable.init();
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4489
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4490 $("[rel=tooltip]").tooltip({ animation: false, });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4491 });
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4492 </script>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4493 </head>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4494
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4495 <body>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4496 <div class="top-panel">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4497 <table class="layout-table">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4498 <tr>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4499 <td class='layout-table-td'>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4500 <div class="page_title">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4501 <h1>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4502 QUAST
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4503 </h1>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4504 <p class="page_subtitle">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4505 <b>Quality Assessment Tool for Genome Assemblies</b>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4506 by <a href="http://cab.spbu.ru" class='dark_bg_link'>CAB</a>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4507 </p>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4508 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4509 </td>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4510 </tr>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4511 </table>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4512 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4513 <div class="content">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4514 <div id='header'>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4515 <p id='report_date'></p>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4516
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4517 <p id='icarus'></p>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4518 <p id='extrainfo'>Loading...</p>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4519 <p id='per_ref_msg'></p>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4520 <p id='krona'></p>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4521
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4522 <p id="data_set_p">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4523 <span style="display: none;" id="reference_name">Aligned to
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4524 "<span class='val'></span>"
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4525 </span>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4526
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4527 <span style="display: none;" id="combined_reference_name">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4528 Combined reference
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4529 </span>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4530
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4531 <span style="display: none;" id="est_reference_length">Estimated reference size:
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4532 <span class='val'></span><span class='rhs'> </span>bp
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4533 </span>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4534
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4535 <span style="display: none;" id="reference_length">\|
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4536 <span class='val'></span><span class='rhs'> </span>bp
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4537 </span>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4538
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4539 <span style="display: none;" id="combined_reference_files">\|
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4540 <span class='val'></span><span class='rhs'> </span>reference<span style="display: none;" class='plural_ending'>s</span>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4541 </span>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4542
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4543 <span style="display: none;" id="reference_fragments">\|
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4544 <span class='val'></span><span class='rhs'> </span>fragment<span style="display: none;" class='plural_ending'>s</span>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4545 </span>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4546
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4547 <span style="display: none;" id="reference_gc">\|
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4548 <span class='val'></span><span class='rhs'> </span>% G+C
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4549 </span>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4550
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4551 <span style="display: none;" id="reference_chr">\|
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4552 <span class='val'></span> chromosome<span style="display: none;" class='plural_ending'>s</span>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4553 </span>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4554
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4555 <span style="display: none;" id="total_reads"><br>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4556 <span class='val'></span> reads
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4557 </span>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4558
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4559 <span style="display: none;" id="reference_mapped_reads">\|
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4560 <span class='val'></span>% mapped
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4561 </span>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4562
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4563 <span style="display: none;" id="reference_paired_reads">\|
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4564 <span class='val'></span>% properly paired
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4565 </span>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4566
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4567 <span style="display: none;" id="reference_features"><br>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4568 <span class='val'></span> genomic features
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4569 </span>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4570
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4571 <span style="display: none;" id="reference_operons">\|
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4572 <span class='val'></span> operons
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4573 </span>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4574 </p>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4575 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4576
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4577 <noscript>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4578 <div style="margin-left: 0;">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4579 Unfortunately, <span style="font-weight: bold">JavaScript</span> in your
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4580 browser <span style="font-weight: bold">is disabled</span> or is not supported.</br>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4581 We need JavaScript to build report and plots.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4582 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4583 </noscript>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4584
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4585 <div class='report-and-plots'>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4586 <div class='report' id='main_report'>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4587 <div id="heatmap_header" style='display: none; float: left;'>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4588 <div style="padding-right: 10px; display: inline-block; vertical-align:top;">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4589 <canvas id="gradientHeatmap" width="150" height="6"></canvas>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4590 <div style="margin-left: 0; text-align: justify;">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4591 <span class="heatmap_legend">Worst</span>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4592 <span style="margin-left: -5px;" class="heatmap_legend">Median</span>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4593 <span class="heatmap_legend">Best</span>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4594 <span class="heatmap_legend" style='width: 100%; height: 0;'></span>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4595 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4596 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4597 <label for="heatmaps_chbox"><input type="checkbox" checked="checked" id="heatmaps_chbox">Show heatmap</label>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4598 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4599 <div style="clear: both;"></div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4600 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4601 <div class='plots'>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4602 <table style='margin: -3px;'>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4603 <tr id='all-switches'>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4604 <td>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4605 <div id='plots-switches'></div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4606 </td>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4607 <td style='text-align: right; padding-right: 22px;'>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4608 <span id='scale-placeholder'></span>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4609 </td>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4610 </tr>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4611 <tr>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4612 <td colspan="2">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4613 <div id='plot-placeholder' style=''></div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4614 </td>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4615 <td>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4616 <div id='legend-placeholder'></div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4617 </td>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4618 </tr>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4619 <tr>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4620 <td colspan="3" id="plot-caption" style="display: none;">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4621 <p id="contigs_are_ordered">Contigs are ordered from largest (contig #1) to smallest.</p>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4622 <p id="frc_info">FRCurve:
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4623 Y is the total number of aligned bases divided by the reference length,
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4624 in the contigs having the total number of <span class="frc_plot_name"></span> at most X.</p>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4625 <p id="gc_info">Contigs are broken into nonoverlapping 100 bp windows.
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4626 Plot shows number of windows for each GC percentage.</p>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4627 <p id="gc_contigs_info">Plot shows number of contigs with GC percentage in a certain range.</p>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4628 </td>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4629 </tr>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4630 </table>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4631 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4632
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4633 <p>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4634 <span id="main_ref_genome"></span>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4635 </p>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4636
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4637 <div style="clear: left"></div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4638 <div style="clear: right"></div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4639
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4640 <div class='json-code'>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4641 <div id='total-report-json'>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4642 {"date":"12 April 2023, Wednesday, 09:50:51","assembliesNames":["TEST"],"referenceName":"","order":[0],"report":[["Genome statistics",[{"metricName":"Complete BUSCO (%)","quality":"More is better","values":["0.00"],"isMain":true},{"metricName":"Partial BUSCO (%)","quality":"Less is better","values":["0.00"],"isMain":true}]],["Reads mapping",[]],["Misassemblies",[]],["Unaligned",[]],["Mismatches",[{"metricName":"# N's per 100 kbp","quality":"Less is better","values":["0.00"],"isMain":true},{"metricName":"# N's","quality":"Less is better","values":[0],"isMain":false}]],["Statistics without reference",[{"metricName":"# contigs","quality":"Equal","values":[62],"isMain":true},{"metricName":"# contigs (>= 0 bp)","quality":"Equal","values":[100],"isMain":false},{"metricName":"# contigs (>= 1000 bp)","quality":"Equal","values":[58],"isMain":false},{"metricName":"# contigs (>= 5000 bp)","quality":"Equal","values":[48],"isMain":false},{"metricName":"# contigs (>= 10000 bp)","quality":"Equal","values":[41],"isMain":false},{"metricName":"# contigs (>= 25000 bp)","quality":"Equal","values":[28],"isMain":false},{"metricName":"# contigs (>= 50000 bp)","quality":"Equal","values":[20],"isMain":false},{"metricName":"Largest contig","quality":"More is better","values":[436224],"isMain":true},{"metricName":"Total length","quality":"More is better","values":[3017519],"isMain":true},{"metricName":"Total length (>= 0 bp)","quality":"More is better","values":[3027634],"isMain":false},{"metricName":"Total length (>= 1000 bp)","quality":"More is better","values":[3015201],"isMain":true},{"metricName":"Total length (>= 5000 bp)","quality":"More is better","values":[2996428],"isMain":false},{"metricName":"Total length (>= 10000 bp)","quality":"More is better","values":[2944723],"isMain":true},{"metricName":"Total length (>= 25000 bp)","quality":"More is better","values":[2735277],"isMain":false},{"metricName":"Total length (>= 50000 bp)","quality":"More is better","values":[2421445],"isMain":true},{"metricName":"N50","quality":"More is better","values":[99915],"isMain":false},{"metricName":"N90","quality":"More is better","values":[27780],"isMain":false},{"metricName":"auN","quality":"More is better","values":["154096.4"],"isMain":false},{"metricName":"L50","quality":"Less is better","values":[8],"isMain":false},{"metricName":"L90","quality":"Less is better","values":[28],"isMain":false},{"metricName":"GC (%)","quality":"Equal","values":["37.31"],"isMain":false}]],["K-mer-based statistics",[]],["Predicted genes",[]],["Similarity statistics",[]],["Reference statistics",[]]],"subreferences":[],"subreports":[],"minContig":500}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4643 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4644 <div id='qualities-json'>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4645 {{ qualities }}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4646 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4647 <div id='main-metrics-json'>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4648 {{ mainMetrics }}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4649 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4650
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4651 <div id="contigs-lengths-json">
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4652 {"filenames":["TEST"],"lists_of_lengths":[[436224,252900,206370,168397,132811,115359,113419,99915,97190,92075,86662,82418,81741,81694,71911,66886,64537,62649,55461,52826,48115,47790,45935,44497,35306,35051,29358,27780,24296,23952,18776,17346,16026,15602,15587,15306,13750,13168,12357,12074,11206,9892,8939,7812,6929,6828,5969,5336,3276,2262,2083,1817,1775,1642,1578,1526,1515,1299,652,607,534,525]]}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4653 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4654 <div id='assemblies-lengths-json'>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4655 {{ assembliesLengths }}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4656 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4657 <div id='reference-length-json'>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4658 {{ referenceLength }}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4659 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4660 <div id='tick-x-json'>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4661 {"tickX":1}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4662 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4663 <div id='coord-nx-json'>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4664 {"coord_x":[[0.0,1e-10,14.45637956215023,14.45637956225023,22.8374369805128,22.837436980612797,29.676499137205102,29.6764991373051,35.25714336844275,35.25714336854275,39.65847439568732,39.65847439578732,43.48144949542986,43.48144949552986,47.24013336784292,47.240133367942924,50.55129727435022,50.55129727445022,53.772155204325145,53.77215520442515,56.82350301688241,56.823503016982414,59.6954650492673,59.6954650493673,62.426781736916986,62.42678173701699,65.13566277461716,65.13566277471716,67.84298624134595,67.84298624144596,70.22610296737155,70.22610296747155,72.44269215869063,72.44269215879063,74.58143594124843,74.58143594134843,76.65761176648763,76.65761176658764,78.49557865252878,78.49557865262878,80.24622214474871,80.24622214484872,81.84074400194332,81.84074400204332,83.42449542156984,83.42449542166985,84.94677249753855,84.94677249763855,86.42139452974448,86.42139452984448,87.59142858752504,87.59142858762505,88.75301199429067,88.75301199439068,89.72593047467142,89.72593047477142,90.64655433818312,90.64655433828312,91.451719110965,91.451719111065,92.24548378982867,92.24548378992867,92.86771682299266,92.86771682309266,93.4425599308571,93.4425599309571,93.97365849229118,93.97365849239118,94.4907057751749,94.4907057752749,95.0072559609401,95.0072559610401,95.5144938606849,95.5144938607849,95.97016621933449,95.97016621943449,96.40655120978526,96.40655120988527,96.81605981602767,96.81605981612768,97.21618985663387,97.21618985673388,97.58755454398133,97.58755454408133,97.91537352374583,97.91537352384583,98.21161026657992,98.21161026667993,98.4704984459087,98.4704984460087,98.7001241748602,98.70012417496021,98.92640278321363,98.92640278331363,99.12421429657941,99.12421429667941,99.30104831154335,99.30104831164336,99.40961432222961,99.40961432232962,99.48457656770347,99.48457656780347,99.5536067875629,99.5536067876629,99.61382181852045,99.61382181862045,99.67264497754613,99.67264497764613,99.72706054212087,99.72706054222087,99.77935515898989,99.77935515908989,99.82992650584802,99.82992650594802,99.88013331481923,99.88013331491923,99.92318192528366,99.92318192538366,99.94478908003562,99.94478908013562,99.964904943432,99.964904943532,99.98260160085157,99.98260160095157,100.0,100.0000000001]],"coord_y":[[436224,436224,436224,252900,252900,206370,206370,168397,168397,132811,132811,115359,115359,113419,113419,99915,99915,97190,97190,92075,92075,86662,86662,82418,82418,81741,81741,81694,81694,71911,71911,66886,66886,64537,64537,62649,62649,55461,55461,52826,52826,48115,48115,47790,47790,45935,45935,44497,44497,35306,35306,35051,35051,29358,29358,27780,27780,24296,24296,23952,23952,18776,18776,17346,17346,16026,16026,15602,15602,15587,15587,15306,15306,13750,13750,13168,13168,12357,12357,12074,12074,11206,11206,9892,9892,8939,8939,7812,7812,6929,6929,6828,6828,5969,5969,5336,5336,3276,3276,2262,2262,2083,2083,1817,1817,1775,1775,1642,1642,1578,1578,1526,1526,1515,1515,1299,1299,652,652,607,607,534,534,525,525,0.0]],"filenames":["TEST"]}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4665 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4666 <div id='coord-ngx-json'>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4667 {{ coordNGx }}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4668 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4669 <div id='coord-nax-json'>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4670 {{ coordNAx }}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4671 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4672 <div id='coord-ngax-json'>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4673 {{ coordNGAx }}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4674 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4675 <div id='coord-misassemblies-json'>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4676 {{ coordmisassemblies }}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4677 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4678 <div id='features-in-contigs-json'>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4679 {{ featuresInContigs }}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4680 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4681 <div id='operons-in-contigs-json'>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4682 {{ operonsInContigs }}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4683 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4684 <div id='summary-json'>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4685 [{{ num_contigs }},
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4686 {{ Largest_alignment }},
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4687 {{ Total_aligned_length }},
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4688 {{ num_misassemblies }},
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4689 {{ Misassembled_contigs_length }},
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4690 {{ num_mismatches_per_100_kbp }},
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4691 {{ num_indels_per_100_kbp }},
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4692 {{ num_N's_per_100_kbp }},
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4693 {{ Genome_fraction }},
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4694 {{ Duplication_ratio }},
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4695 {{ NGA50 }}]
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4696 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4697 <div id='misassemblies-json'>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4698 {{ allMisassemblies }}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4699 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4700 <div id='krona-json'>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4701 {{ krona }}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4702 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4703 <div id='gc-json'>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4704 {"filenames":["TEST"],"reference_index":null,"list_of_GC_distributions":[[[0.0,1.0,2.0,3.0,4.0,5.0,6.0,7.0,8.0,9.0,10.0,11.0,12.0,13.0,14.0,15.0,16.0,17.0,18.0,19.0,20.0,21.0,22.0,23.0,24.0,25.0,26.0,27.0,28.0,29.0,30.0,31.0,32.0,33.0,34.0,35.0,36.0,37.0,38.0,39.0,40.0,41.0,42.0,43.0,44.0,45.0,46.0,47.0,48.0,49.0,50.0,51.0,52.0,53.0,54.0,55.0,56.0,57.0,58.0,59.0,60.0,61.0,62.0,63.0,64.0,65.0,66.0,67.0,68.0,69.0,70.0,71.0,72.0,73.0,74.0,75.0,76.0,77.0,78.0,79.0,80.0,81.0,82.0,83.0,84.0,85.0,86.0,87.0,88.0,89.0,90.0,91.0,92.0,93.0,94.0,95.0,96.0,97.0,98.0,99.0,100.0],[0,0,0,0,0,0,0,0,1,0,0,1,2,1,1,8,9,12,23,35,61,95,116,157,220,277,347,457,580,713,942,1109,1276,1469,1593,1822,1890,1935,1942,1965,1885,1759,1570,1320,1103,862,701,537,433,295,196,142,95,82,45,30,22,15,10,6,5,1,2,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]]],"list_of_GC_contigs_distributions":[[[0,5,10,15,20,25,30,35,40,45,50,55,60,65,70,75,80,85,90,95,100],[0,0,0,0,0,1,12,44,2,1,2,0,0,0,0,0,0,0,0,0,0]]],"lists_of_gc_info":null}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4705 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4706 <div id='icarus-json'>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4707 {"links":["icarus_viewers/contig_size_viewer.html"],"links_names":["View in Icarus contig browser"]}
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4708 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4709 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4710 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4711
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4712 <div class='json-code'>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4713 <div id='glossary-json'>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4714 {
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4715 "# contigs" : "<span>is the total number of contigs in the assembly.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4716 "Largest contig" : "<span>is the length of the longest contig in the assembly.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4717 "Total length" : "<span>is the total number of bases in the assembly.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4718 "Reference length" : "<span>is the total number of bases in the reference.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4719
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4720 "# contigs (>= 0 bp)" : "<span>is the total number of contigs in the assembly that have size greater than or equal to 0 bp.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4721 "Total length (>= 0 bp)" : "<span>is the total number of bases in the contigs having size greater than or equal to 0 bp.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4722
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4723 "N50" : "<span>is the contig length such that using longer or equal length contigs produces half (50%) of the bases of the assembly. Usually there is no value that produces exactly 50%, so the technical definition is the maximum length x such that using contigs of length at least x accounts for at least 50% of the total assembly length. Similarly, Nx for any x between 0 and 100 could be computed (x% of assembly).</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4724 "NG50" : "<span>is the contig length such that using longer or equal length contigs produces half (50%) of the bases of the reference genome. This metric is computed only if a reference genome is provided. Similarly, NGx for any x between 0 and 100 could be computed (x% of the reference).</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4725
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4726 "L50" : "<span>is the minimum number of contigs that produce half (50%) of the bases of the assembly. In other words, it's the number of contigs of length at least N50. Similarly, Lx for any x between 0 and 100 could be computed.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4727 "LG50" : "<span>is the minimum number of contigs that produce half (50%) of the bases of the reference genome. In other words, it's the number of contigs of length at least NG50. This metric is computed only if a reference genome is provided. Similarly, LGx for any x between 0 and 100 could be computed.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4728
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4729 "NA50" : "<span>is N50 where the lengths of aligned blocks are counted instead of contig lengths. I.e., if a contig has a misassembly with respect to the reference, the contig is broken into smaller pieces. This metric is computed only if a reference genome is provided. Similarly, NAx for any x between 0 and 100 could be computed.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4730 "NGA50" : "<span>is NG50 where the lengths of aligned blocks are counted instead of contig lengths. I.e., if a contig has a misassembly with respect to the reference, the contig is broken into smaller pieces. This metric is computed only if a reference genome is provided. Similarly, NGAx for any x between 0 and 100 could be computed.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4731
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4732 "LA50" : "<span>is L50 where aligned blocks are counted instead of contigs. I.e., if a contig has a misassembly with respect to the reference, the contig is broken into smaller pieces. Similarly, LAx for any x between 0 and 100 could be computed.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4733 "LGA50" : "<span>is LG50 where aligned blocks are counted instead of contigs. I.e., if a contig has a misassembly with respect to the reference, the contig is broken into smaller pieces. Similarly, LGAx for any x between 0 and 100 could be computed.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4734
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4735 "auN" : "<span>is the area under the Nx curve.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4736 "auNG" : "<span>is the area under the NGx curve.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4737 "auNA" : "<span>is the area under the NAx curve.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4738 "auNGA" : "<span>is the area under the NGAx curve.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4739
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4740 "Average %IDY" : "<span>is the average of alignment identity percent (alignment accuracy) among all contigs.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4741 "# misassemblies" : "<span>is the number of positions in the assembled contigs where the left flanking sequence aligns over 1 kbp away from the right flanking sequence on the reference (<i>relocation</i>) or they overlap on more than 1 kbp (<i>relocation</i>) or flanking sequences align on different strands (<i>inversion</i>) or different chromosomes (<i>translocation</i>).</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4742 "# large block misassemblies" : "<span>is the number of misassemblies between alignments with length greater than or equal to 3 kbp and with the misassembly threshold equal to 5 kbp (instead of default 1 kbp for regular misassemblies).</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4743 "# misassembled contigs" : "<span>is the number of contigs that contain misassembly events.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4744 "Misassembled contigs length" : "<span>is the number of total bases contained in all contigs that have one or more misassemblies.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4745
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4746 "# relocations" : "<span>is the number of relocation events among all misassembly events. Relocation is a misassembly where the left flanking sequence aligns over 1 kbp away from the right flanking sequence on the reference, or they overlap by more than 1 kbp and both flanking sequences align on the same chromosome.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4747 "# translocations" : "<span>is the number of translocation events among all misassembly events. Translocation is a misassembly where the flanking sequences align on different chromosomes.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4748 "# interspecies translocations" : "<span>is the number of interspecies translocation events among all misassembly events. Interspecies translocation is a misassembly where the flanking sequences align on different references (based on alignments to the combined reference).</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4749 "# inversions" : "<span>is the number of inversion events among all misassembly events. Inversion is a misassembly where it is not a <i>relocation</i> and the flanking sequences align on opposite strands of the same chromosome.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4750 "# large relocations" : "<span>is the number of relocation events among all large block misassemblies. Relocation is a misassembly where the left flanking sequence aligns over 5 kbp away from the right flanking sequence on the reference, or they overlap by more than 5 kbp and both flanking sequences align on the same chromosome.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4751 "# large translocations" : "<span>is the number of translocation events among all large block misassemblies. Translocation is a misassembly where the flanking sequences align on different chromosomes.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4752 "# large i/s translocations" : "<span>is the number of interspecies translocation events among all large block misassemblies. Interspecies translocation is a misassembly where the flanking sequences align on different references (based on alignments to the combined reference).</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4753 "# large inversions" : "<span>is the number of inversion events among all large block misassemblies. Inversion is a misassembly where it is not a <i>relocation</i> and the flanking sequences align on opposite strands of the same chromosome.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4754 "# local misassemblies" : "<span>is the number of local misassemblies. We define a local misassembly breakpoint as a breakpoint that satisfies these conditions: <ol> <li>Two or more distinct alignments cover the breakpoint.</li> <li>The gap between left and right flanking sequences is less than the misassembly threshold (1 kbp by default).</li> <li>The left and right flanking sequences both are on the same strand of the same chromosome of the reference genome.</li> </ol> </span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4755 "# scaffold gap ext. mis." : "<span>is the number of scaffold gap size extensive misassemblies. We define a scaffold gap size misassembly as a breakpoint where the flanking sequences are combined in a scaffold on the wrong distance. These misassemblies are not included in the total number of misassemblies. </span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4756 "# scaffold gap loc. mis." : "<span>is the number of scaffold gap size local misassemblies. Such breakpoints satisfy the local misassembly conditions but they occur inside scaffolds. These misassemblies are not included in the total number of local misassemblies. </span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4757 "# possibly misassembled contigs": "<span>is the number of contigs that contain large unaligned fragment (default min length is 500 bp) and thus could possibly contain interspecies translocation with unknown reference.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4758 "# possible misassemblies" : "<span>is the number of putative interspecies translocations in possibly misassembled contigs if each large unaligned fragment is supposed to be a fragment of unknown reference.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4759 "# intergenomic misassemblies" : "<span>is the number of all found and putative (possible) interspecies translocations.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4760 "# structural variations" : "<span>is the number of misassemblies matched with structural variations.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4761 "# possible TEs" : "<span>is the number of misassemblies possibly caused by transposable elements (TEs). We define a possible TE as an event that satisfies these conditions: <ol> <li>There are two misassembly breakpoints of the same type around a short alignment (less than 7 kbp by default)</li> <li>The gap between two long flanking sequences on the sides of the short alignment is less than 7 kbp.</li> <li> The long flanking sequences both are on the same strand of the same chromosome of the reference genome.</li> </ol> </span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4762 "# unaligned mis. contigs" : "<span>is the number of contigs that have the number of unaligned bases more than 50% of the contig length and a misassembly event in their aligned fragment. Note that such misassemblies are not counted in <i># misassemblies</i> and other <i>misassemblies</i> statistics.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4763
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4764 "# fully unaligned contigs" : "<span>is the number of contigs that have no alignment to the reference sequence.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4765 "Fully unaligned length" : "<span>is the total number of bases contained in all fully unaligned contigs. Uncalled bases (N's) are not counted.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4766 "# partially unaligned contigs" : "<span>is the number of contigs that have at least one alignment to the reference sequence but also have at least one unaligned fragment of length ≥ <i>unaligned-part-size threshold</i> (uncalled bases (N's) are not counted towards the fragment length).</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4767 "Partially unaligned length" : "<span>is the total number of unaligned bases in all partially unaligned contigs. Uncalled bases (N's) are not counted.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4768
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4769 "# ambiguous contigs" : "<span>is the number of contigs that have reference alignments of equal quality in multiple locations on the reference.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4770 "Ambiguous contigs length" : "<span>is the total number of bases contained in all ambiguous contigs.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4771
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4772 "Genome fraction (%)" : "<span>is the total number of aligned bases in the reference, divided by the genome size. A base in the reference genome is counted as aligned if there is at least one contig with at least one alignment to this base. Contigs from repeat regions may map to multiple places, and thus may be counted multiple times in this quantity.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4773 "GC (%)" : "<span>is the total number of G and C nucleotides in the assembly, divided by the total length of the assembly.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4774 "Reference GC (%)" : "<span>is the total number of G and C nucleotides in the reference, divided by the total length of the reference.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4775
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4776 "# mismatches per 100 kbp" : "<span>is the average number of mismatches per 100,000 aligned bases in the assembly.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4777 "# mismatches" : "<span>is the number of mismatches in all aligned bases in the assembly.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4778 "# indels per 100 kbp" : "<span>is the average number of indels per 100,000 aligned bases in the assembly.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4779 "# indels" : "<span>is the number of indels in all aligned bases in the assembly.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4780 "# indels (<= 5 bp)" : "<span>is the number of indels of length less than or equal to 5 bp.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4781 "# indels (> 5 bp)" : "<span>is the number of indels of length greater than 5 bp.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4782 "Indels length" : "<span>is the number of total bases contained in all indels.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4783
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4784 "# genomic features" : "<span>is the number of genomic features (genes, transcripts, CDS) in the assembly (complete and partial), based on a user-provided annotated list of gene positions in the reference genome. A feature counts as 'partially covered' if the assembly contains at least 100 bp of this feature but not the whole feature.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4785 "# operons" : "<span>is the number of operons in the assembly (complete and partial), based on a user-provided annotated list of operon positions in the reference genome. An operon counts as 'partially covered' if the assembly contains at least 100 bp of this operon but not the whole operon.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4786 "# predicted genes (unique)" : "<span>is the number of unique genes in the assembly found by a gene prediction tool.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4787 "# predicted genes (>= 0 bp)" : "<span>is the number of found genes having length greater than or equal to 0 bp.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4788
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4789 "Complete BUSCO (%)" : "<span>is the percent of BUSCO (Universal Single-Copy Ortholog) genes found in the assembly in a complete form.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4790 "Partial BUSCO (%)" : "<span>is the percent of BUSCO (Universal Single-Copy Ortholog) genes found in the assembly in a partial form.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4791
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4792 "Cumulative length" : "<span>plot shows the growth of assembly contig lengths. On the x-axis, contigs are ordered from largest (contig #1) to smallest. The y-axis gives the size of the x largest contigs in the assembly.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4793 "Nx" : "<span>plot shows the Nx metric value as x varies from 0 to 100.</span> <span>Nx is the minimum contig length <b>y</b> such that using contigs of length at least <b>y</b> accounts for at least x% of the total assembly length.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4794 "NGx" : "<span>plot shows the NGx metric value as x varies from 0 to 100.</span> <span>NGx is the minimum contig length <b>y</b> such that using contigs of length at least <b>y</b> accounts for at least x% of the bases of the reference genome. This metric is computed only if a reference genome is provided.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4795 "NAx" : "<span>plot shows the NAx metric value as x varies from 0 to 100.</span> <span>NAx is computed similarly to Nx, but based on lengths of aligned blocks instead of contig lengths. Contigs are broken into aligned blocks at misassembly breakpoints. NAx is the minimum block length <b>y</b> such that using blocks of length at least <b>y</b> accounts for at least x% of the bases of the assembly. This metric is computed only if a reference genome is provided.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4796 "NGAx" : "<span>plot shows the NGAx metric value as x varies from 0 to 100.</span><span>NGAx is computed similarly to NGx, but based on lengths of aligned blocks instead of contig lengths. Contigs are broken at misassembly breakpoints. NGAx is the minimum block length <b>y</b> such that using blocks of length at least <b>y</b> accounts for at least x% of the bases of the reference genome. This metric is computed only if a reference genome is provided.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4797 "GC content" : "<span>plot shows the distribution of GC percentage among the contigs, i.e., the total number of bases in contigs with such GC content. Typically, the distribution is approximately Gaussian. However, for some genomes it is not Gaussian. For assembly projects with contaminants, the GC distribution of the contaminants often differs from the reference genome and may give a superposition of multiple curves with different peaks.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4798
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4799 "Duplication ratio" : "<span>is the total number of aligned bases in the assembly, divided by the total number of aligned bases in the reference (see the <b>Genome fraction (%)</b> metric). If the assembly contains many contigs that cover the same regions of the reference, its <i>Duplication ratio</i> may be much larger than 1. This may occur due to overestimating repeat multiplicities and due to small overlaps between contigs, among other reasons.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4800 "Largest alignment" : "<span>is the length of the largest continuous alignment in the assembly. This metric is always equal to the <i>Largest contig</i> metric but it can be smaller if the largest contig of the assembly contains a misassembly event.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4801 "Total aligned length" : "<span>is the total number of aligned bases in the assembly.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4802 "Avg contig read support" : "<span>is the average coverage of contigs that have large unique alignments to the reference. Read coverage is extracted from contig names (SPAdes/Velvet naming scheme only).</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4803
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4804 "# N's" : "<span>is the total number of uncalled bases (N's) in the assembly.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4805 "# N's per 100 kbp" : "<span>is the average number of uncalled bases (N's) per 100,000 assembly bases.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4806
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4807 "# mapped" : "<span>is the number of reads that mapped to the assembly.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4808 "Mapped (%)" : "<span>is the percent of reads that mapped to the assembly.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4809 "# properly paired" : "<span>is the number of reads that mapped within expected range and orientation of each other to the assembly.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4810 "Properly paired (%)" : "<span>is the percent of reads that mapped within expected range and orientation of each other to the assembly.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4811 "# singletons" : "<span>is the number of reads which do not overlap any other reads.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4812 "Singletons (%)" : "<span>is the percent of reads which do not overlap any other reads.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4813 "# misjoint mates" : "<span>is the number of reads with mate mapped to a different contig.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4814 "Misjoint mates (%)" : "<span>is the percent of reads with mate mapped to a different contig.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4815 "Avg. coverage depth" : "<span>is the average depth of coverage.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4816 "Coverage >= 1x (%)" : "<span>is the total number of bases with at least 1x coverage, divided by the total length of the assembly.</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4817
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4818 "# similar correct contigs" : "<span>is the number of correct contigs similar among > 50% assemblies (see Icarus for visualization).</span>",
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4819 "# similar misassembled blocks" : "<span>is the number of misassembled blocks similar among > 50% assemblies (see Icarus for visualization).</span>"
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4820 }
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4821
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4822 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4823 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4824 </div>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4825 </body>
6e868bf6c38e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2 iuc parents: diff changeset	4826 </html>

Mercurial > repos > iuc > tooldistillator

annotate test-data/quast/quast_report.html @ 0:6e868bf6c38e draft