Mercurial > repos > iuc > tooldistillator
view test-data/isescan/results.tsv @ 2:a7387ce2a8ca draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit d7cada7ddf775e946e218fdc839e6e4c8aac6d80
| author | iuc |
|---|---|
| date | Wed, 03 Jul 2024 12:06:58 +0000 |
| parents | 6e868bf6c38e |
| children |
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seqID family cluster isBegin isEnd isLen ncopy4is start1 end1 start2 end2 score irId irLen nGaps orfBegin orfEnd strand orfLen E-value E-value4copy type ov tir contig00001 IS21 IS21_259 104722 106001 1280 1 104722 104735 105988 106001 20 12 14 0 105201 106043 + 843 2.1e-13 2.1e-13 p 1 TTGAAAAAAATAGC:TTGGAAAACATAGC contig00002 IS200/IS605 IS200/IS605_96 179502 180572 1071 1 0 0 0 0 0 0 0 0 179502 180572 - 1071 1.2e-69 1.2e-69 c 1 -:- contig00002 IS21 IS21_288 210210 214514 4305 1 210210 210236 214488 214514 26 20 27 0 210541 214169 - 3629 6.1e-11 6.1e-11 p 1 ATTAAGCCAAATGGCAATGGTGATGAA:ATCAAGAAAAATGGGGATCGTGAAGAA contig00002 IS30 IS30_241 252678 252900 223 1 0 0 0 0 0 0 0 0 252678 252900 + 223 8.3e-32 8.3e-32 p 1 -:- contig00005 IS30 IS30_241 54 3033 2980 1 54 67 3020 3033 20 12 14 0 1 2892 + 2892 6.2e-51 6.2e-51 p 1 AAAAGAATTTTCTA:AAATGAATGTTCTA contig00005 IS21 IS21_259 84142 85683 1542 1 84142 84174 85651 85683 34 25 33 0 84182 85525 - 1344 6.3e-15 6.3e-15 p 1 TGTGGATAACTTTGTTCTTTTTTGTTTAGTTTT:TGTGGAAAACTTTTTTCACCCTTGTGTACTTTT contig00008 IS30 IS30_241 99798 99915 118 1 0 0 0 0 0 0 0 0 99798 99915 - 118 4.6e-11 4.6e-11 p 1 -:- contig00010 IS6 IS6_292 1 138 138 1 0 0 0 0 0 0 0 0 1 138 - 138 7.2e-22 7.2e-22 p 1 -:- contig00010 IS256 IS256_47 63216 65257 2042 1 63216 63259 65215 65257 26 30 44 1 63507 64842 - 1336 4.3e-136 4.3e-136 c 1 AGGGATTCTTAGAAGTAGAAGCTCAACATTTTGAACTTATAGAA:AGGCATTTGTGGAATTATACTTTCAATA-TTAGAACTTTTTGAA contig00010 IS3 IS3_176 65906 67630 1725 1 65906 65936 67600 67630 34 24 31 0 65942 67421 + 1480 2.5e-113 2.5e-113 c 1 TGGATAGGCTACAATTAACTAGACAGAAAAA:TGGATAGATGTCAATAAAGTAGACACAAAAA contig00010 IS256 IS256_162 70798 72118 1321 1 70798 70826 72090 72118 38 24 29 0 71048 72069 + 1022 1.9e-148 1.9e-148 c 1 TAGCGTAAAATATTTTGTGTAAATAGAAA:TAGCGTCAAGAATTATGTGTAAATGGAAA contig00010 ISL3 ISL3_126|ISL3||protein:plasmid:139408 74315 76017 1703 1 74315 74360 75974 76017 24 32 46 2 74651 75803 + 1153 5.1e-56 5.1e-56 c 1 TTATTCCCTCTCTTATCATATTATCATCTTCAACAGTTAATATTTT:TTAGTACTTCTTGTATCAT-TGATTAT-TTCTTCATTCAATATATT contig00010 IS256 IS256_162 81227 82564 1338 1 81227 81253 82538 82564 34 22 27 0 81322 82512 + 1191 2e-192 2e-192 c 1 TGAGAGTGTAAAATATTTTGTGTAAAT:TGGGAGCGTCAATAATTTTGTGTAAAT contig00017 ISL3 ISL3_126|ISL3||protein:plasmid:139408 93 1807 1715 1 93 102 1798 1807 20 10 10 0 192 1618 + 1427 1.4e-44 1.4e-44 p 1 TTTTTATTTT:TTTTTATTTT contig00029 IS30 IS30_241 15381 16432 1052 1 15381 15402 16411 16432 36 20 22 0 15385 16344 - 960 1.7e-143 1.7e-143 c 1 ATTGTCAAATTAAGTTAGACAA:ATTGTAAAATTAAGCTAGACAA contig00030 IS30 IS30_241 23835 23952 118 1 0 0 0 0 0 0 0 0 23835 23952 - 118 4.6e-11 4.6e-11 p 1 -:- contig00035 IS3 IS3_61 7068 7978 911 1 7068 7091 7955 7978 20 17 24 0 7039 8102 + 1064 6.2e-50 6.2e-50 p 1 AATTCAGTTATTTTTAAAATATGA:AAATCAGCAATTTTGTAAAAGTGA contig00036 IS30 IS30_241 1 117 117 1 0 0 0 0 0 0 0 0 1 117 + 117 4.6e-11 4.6e-11 p 1 -:- contig00036 IS3 IS3_97 1131 2606 1476 1 1131 1154 2583 2606 32 20 24 0 1090 2554 - 1465 6.2e-133 6.2e-133 c 1 GTGCACCCCAAAAGTTAGACTTTT:GTGACCCCCAAAATATAGACTTTT contig00036 ISL3 ISL3_126|ISL3||protein:plasmid:139408 6170 7474 1305 1 6170 6184 7460 7474 22 13 15 0 6652 7530 + 879 2.6e-54 2.6e-54 c 1 TTAGTGTAAAATTGA:TTAGCGTAAAACTGA contig00036 IS256 IS256_162 9125 10401 1277 1 9125 9140 10386 10401 20 13 16 0 9092 10351 - 1260 1.5e-189 1.5e-189 c 1 TCTGTCAAATAGTGTT:TCTGTAGAATAGAGTT contig00036 IS256 IS256_162 13800 15146 1347 1 13800 13820 15126 15146 30 18 21 0 13804 15031 - 1228 6.9e-136 6.9e-136 c 1 AGCGTCAAGAATCTTGTGTAA:AGCGTAAAATATCTTGTGTAA contig00043 IS256 IS256_162 211 1174 964 1 211 230 1155 1174 28 17 20 0 591 1213 + 623 2.8e-67 2.8e-67 p 1 CAATGATTTCGTGTGAATAA:CAATAATTTTGTGTAAATAA contig00043 IS6 IS6_292 5366 6174 809 1 5366 5383 6157 6174 32 17 18 0 5661 6221 + 561 5.3e-63 5.3e-63 c 1 GGTTCTGTTGCAAAGTTT:GGTTCTGTTGCGAAGTTT contig00045 IS30 IS30_241 1 117 117 1 0 0 0 0 0 0 0 0 1 117 + 117 4.6e-11 4.6e-11 p 1 -:- contig00053 IS110 IS110_139 261 1613 1353 1 261 280 1594 1613 20 15 20 0 385 1635 + 1251 1e-33 1e-33 p 1 GGTGGCTTAGAGGTTTAATG:GGTGGCATATAGAGTTGATG contig00056 ISL3 ISL3_126|ISL3||protein:plasmid:139408 75 1478 1404 1 75 118 1433 1478 40 36 46 2 84 1367 - 1284 2.1e-50 2.1e-50 p 1 CTTTTTTAG-TTATTTAATTTTAATA-AGGCCGTTTATCAAGAAAA:CTTTTTTAGTTTATTTAAATATAAAACATGTCGTCTATCTAGTAAA contig00057 IS3 IS3_97 7 1510 1504 1 7 25 1492 1510 34 18 19 0 58 1460 - 1403 6.1e-131 6.1e-131 c 1 CGACCCCAAAAAGTTAGAC:CGACCCCCAAAAGTTAGAC contig00058 IS30 IS30_241 1 1299 1299 1 1 127 1173 1299 254 127 127 0 201 1160 - 960 1.1e-160 1.1e-160 c 1 CGGCTACAATAATCACATCCTGCTGAAATTGCTTTCCTTTAAAATGATTCATCGTCATTCCTCCTGCTATCTTTTTCTATTATTCTACCTTATTTGATAGTAGATTTAAAACTTTGCAACAGAACCG:CGGCTACAATAATCACATCCTGCTGAAATTGCTTTCCTTTAAAATGATTCATCGTCATTCCTCCTGCTATCTTTTTCTATTATTCTACCTTATTTGATAGTAGATTTAAAACTTTGCAACAGAACCG contig00059 IS30 IS30_241 102 592 491 1 102 114 580 592 18 11 13 0 1 652 + 652 6.1e-113 6.1e-113 p 1 TAGAAAAGTCATT:TAGAAAATTCTTT contig00062 IS6 IS6_292 140 474 335 1 140 151 463 474 16 10 12 0 1 525 - 525 2.3e-92 2.3e-92 p 1 CTACAACCTTCG:CTACTATCTTCG contig00070 IS6 IS6_292 1 332 332 1 0 0 0 0 0 0 0 0 1 332 - 332 3.3e-26 3.3e-26 p 1 -:- contig00076 IS30 IS30_241 1 223 223 1 0 0 0 0 0 0 0 0 1 223 - 223 8.3e-32 8.3e-32 p 1 -:- contig00079 IS30 IS30_241 1 255 255 1 0 0 0 0 0 0 0 0 1 255 - 255 1.2e-41 1.2e-41 p 1 -:- contig00083 IS6 IS6_292 1 128 128 1 0 0 0 0 0 0 0 0 1 128 + 128 7.1e-19 7.1e-19 p 1 -:- contig00083 IS6 IS6_292 135 255 121 1 0 0 0 0 0 0 0 0 135 255 + 121 9.9e-18 9.9e-18 p 1 -:- contig00085 IS30 IS30_241 1 255 255 1 0 0 0 0 0 0 0 0 1 255 + 255 1.2e-41 1.2e-41 p 1 -:- contig00090 IS6 IS6_292 1 250 250 1 0 0 0 0 0 0 0 0 1 250 - 250 1.4e-34 1.4e-34 p 1 -:- contig00093 IS6 IS6_292 1 231 231 1 0 0 0 0 0 0 0 0 1 231 - 231 4.5e-41 4.5e-41 p 1 -:- contig00094 IS6 IS6_292 69 206 138 1 0 0 0 0 0 0 0 0 69 206 + 138 1.4e-20 1.4e-20 p 1 -:- contig00096 IS30 IS30_241 1 161 161 1 0 0 0 0 0 0 0 0 1 161 - 161 6.2e-24 6.2e-24 p 1 -:- contig00097 IS6 IS6_292 1 151 151 1 0 0 0 0 0 0 0 0 1 151 - 151 2.5e-24 2.5e-24 p 1 -:- contig00098 IS30 IS30_241 1 138 138 1 0 0 0 0 0 0 0 0 1 138 + 138 1.5e-18 1.5e-18 p 1 -:-