changeset 10:a5ef8d31c40e draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tooldistillator commit 8b457de07321c18ffc19ec12b533cfda0a4716fd
author iuc
date Mon, 27 Oct 2025 09:47:51 +0000
parents bbdc53e9b559
children
files macro.xml test-data/amrfinderplus/AMRFinderPlus_Nucleotide_identified_sequences.fasta
diffstat 2 files changed, 48 insertions(+), 210 deletions(-) [+]
line wrap: on
line diff
--- a/macro.xml	Mon Oct 06 14:12:44 2025 +0000
+++ b/macro.xml	Mon Oct 27 09:47:51 2025 +0000
@@ -1,6 +1,6 @@
 <?xml version="1.0"?>
 <macros>
-    <token name="@TOOL_VERSION@">1.0.1</token>
+    <token name="@TOOL_VERSION@">1.0.3</token>
     <token name="@VERSION_SUFFIX@">0</token>
     <token name="@PROFILE@">21.05</token>
     <xml name="version_command">
--- a/test-data/amrfinderplus/AMRFinderPlus_Nucleotide_identified_sequences.fasta	Mon Oct 06 14:12:44 2025 +0000
+++ b/test-data/amrfinderplus/AMRFinderPlus_Nucleotide_identified_sequences.fasta	Mon Oct 27 09:47:51 2025 +0000
@@ -1,209 +1,47 @@
->contig_153_polypolish:4412-4645 strand:- merE broad-spectrum mercury transporter MerE
-ATGAACAGCCCAGAGCACTTGCCGTCTGAGACGCACAAACCGATCACCGGCTACTTGTGG
-GGCGCGCTGGCCGTGCTCACCTGTCCCTGCCATTTGCCGATTCTCGCCATTGTGCTAGCC
-GGCACGACGGCCGGCGCGTTCATCGGGGAGCACTGGGGTATTGCAGCCCTCACGCTGACC
-GGCTTGTTTGTCCTGTCTGTGACGCGGCTGCTGCGGGCCTTCAAGGGAAGATCA
->contig_153_polypolish:7613-7846 strand:- merT mercuric transport protein MerT
-TCTGAACCACAAAACGGGCGCGGCGCGTTCTTCGCCGGTGGGCTGGCCGCCATTCTTGCG
-TCGGCCTGCTGCCCGGGGCCGCTGGTTTTGATCGCCTTGGGGTTCAGCGGGGCATGGATC
-GGCAACCTGACGGTGCTGGAACCCTATCGCCCGATCTTCATCGGCGCAGCGCTGGTCGCG
-CTGCTTTTCGCCCGGCGGCGCATCTACCGCCCGGCGCAAGCCTGCCAAACCGGG
->contig_160_polypolish:86415-86654 strand:- fosA FosA5 family fosfomycin resistance glutathione transferase
-GCAGTCAGCCAGCTGGCGCCGAGCGTGGCGTTTTATCAGCAGCTGTTGGGCATGACGCTG
-CACGCCCGCTGGGACAGCGGCGCCTATCTCTCCTGCGGCGATTTGTGGCTGTGCCTGTCG
-CTGGATCCGCAGCGGCGCATCACCCCGCCGGAGGAGAGCGACTACACCCATTATGCGTTT
-AGCATTAGCGAGGCGGATTTCGCTAGCTTCGCCGCCCGCCTTGAGGTTGCCGGCGTCAGC
->contig_30_polypolish:13708-14433 strand:+ blaCTX-M CTX-M family extended-spectrum class A beta-lactamase
-AAACTTGCCGAATTAGAGCGGCAGTCGGGAGGCAGACTGGGTGTGGCATTGATTAACACA
-GCAGATAATTCGCAAATACTTTATCGTGCTGATGAGCGCTTTGCGATGTGCAGCACCAGT
-AAAGTGATGGCCGCGGCCGCGGTGCTGAAGAAAAGTGAAAGCGAACCGAATCTGTTAAAT
-CAGCGAGTTGAGATCAAAAAATCTGACCTTGTTAACTATAATCCGATTGCGGAAAAGCAC
-GTCAATGGGACGATGTCACTGGCTGAGCTTAGCGCGGCCGCGCTACAGTACAGCGATAAC
-GTGGCGATGAATAAGCTGATTGCTCACGTTGGCGGCCCGGCTAGCGTCACCGCGTTCGCC
-CGACAGCTGGGAGACGAAACGTTCCGTCTCGACCGTACCGAGCCGACGTTAAACACCGCC
-ATTCCGGGCGATCCGCGTGATACCACTTCACCTCGGGCAATGGCGCAAACTCTGCGGAAT
-CTGACGCTGGGTAAAGCATTGGGCGACAGCCAACGGGCGCAGCTGGTGACATGGATGAAA
-GGCAATACCACCGGTGCAGCGAGCATTCAGGCTGGACTGCCTGCTTCCCGGGTTGTGGGG
-GATAAAACCGGCAGCGGTGGCTATGGCACCACCAACGATATCGCGGTGATCTGGCCAAAG
-ATCGTGCGCCGCTGATTCTGGTCACTTACTTCACCCAGCCTCAACCTAAGGCAGAAAGCC
-GTCGCG
->contig_30_polypolish:17856-18287 strand:+ merR mercury resistance transcriptional regulator MerR
-ATGGAAAATAATTTGGAAAACCTGACCATTGGCGTTTTTGCCAAGGCGGCCGGGGTCAAC
-GTGGAGACAATCCGCTTCTATCAGCGCAAGGGCCTGTTGCGGGAACCGGACAAGCCTTAC
-GGCAGCATCCGCCGCTATGGGGAGGCGGACGTGGTTCGGGTGAAATTCGTGAAATCGGCA
-CAGCGGCTGGGGTTCAGTCTGGACGAGATTGCCGAGCTGTTGCGGCTCGACGATGGCACC
-CACTGCGAGGAGGCCAGCAGCCCGGCCGAACACAAGCTCAAGGACGTGCGCGAGAAGATG
-GCCGACTTGGCGCGCATGGAAACCGTGCTGTCTGAACTCGTGTGCGCCTGCCATGCACGC
-AAGGGGAATGTTTCCTGCCCGTTGATCGCGTCACTACAGGGCGAAGCAGGCCCGGCAAGG
-TCAGCTATGCCT
->contig_30_polypolish:20698-21348 strand:+ catA1 type A-1 chloramphenicol O-acetyltransferase
-GAAAAAATCACTGGATATACCACCGTTGATATATCCCAATGGCATCGTAAAGAACATTTT
-GAGGCATTTCAGTCAGTTGCTCAATGTACCTATAACCAGACCGTTCAGCTGGATATTACG
-GCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTCACATT
-CTTGCCCGCCTGATGAATGCTCATCCGGAATTCCGTATGGCAATGAAAGACGGTGAGCTG
-GTGATATGGGATAGTGTTCACCCTTGTTACACCGTTTTCCATGAGCAAACTGAAACGTTT
-TCATCGCTCTGGAGTGAATACCACGACGATTTCCGGCAGTTTCTACACATATATTCGCAA
-GATGTGGCGTGTTACGGTGAAAACCGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGT
-TTTTCGTCTCAGCCAATCCCACGGGTGAGTTTCACCAGTTTTGATTTAAACGTGGCCAAT
-ATGGACAACTTCTTCGCCCCCGTTTTCACCATGGGCAAATATTATACGCAAGGCGACAAG
-GTGCTGATGCCGCTGGCGATTCAGGTTCATCATGCCGTTTGTGATGGCTTCCATGTCGGC
-AGAATGCTTAATGAATTACAACAGTACTGCGATGAGTGGCAGGGCGGGGCG
->contig_30_polypolish:3018-3344 strand:+ merR mercury resistance transcriptional regulator MerR
-TTTGCCAAGGCGGCCGGGGTCAACGTGGAGACAATCCGCTTCTATCAGCGCAAGGGCCTG
-TTGCGGGAACCGGACAAGCCTTACGGCGGCATCCGCCGCTATGGGGAGGCGGACGTGGTT
-CGGGTGAAATTCGTGAAATCGGCACAGCGGCTGGGGTTCAGTCTGGACGAGATTGCCGAG
-CTGTTGCGGCTCGACGATGGCACCCACTGCGAGGAGGCCAGCAGCTTGGCCGAACACAAG
-CTCAAGGACGTGCGCGAGAAGATGGCCGACTTGGCGCGCATGGAAACCGTGCTGTCTGAA
-CTCGTGTGCGCCTGCCATGCACGAAGG
->contig_30_polypolish:5821-6243 strand:+ catA1 type A-1 chloramphenicol O-acetyltransferase
-GAAAAAATCACTGGATATACCACCGTTGATATATCCCAATGGCATCGTAAAGAACATTTT
-GAGGCATTTCAGTCAGTTGCTCAATGTACCTATAACCAGACCGTTCAGCTGGATATTACG
-GCCTTTTTAAAGACCGTAAAGAAAAATAAGCACAAGTTTTATCCGGCCTTTATTCACATT
-CTTGCCCGCCTGATGAATGCTCATCCGGAATTCCGTATGGCAATGAAAGACGGTGAGCTG
-GTGATATGGGATAGTGTTCACCCTTGTTACACCGTTTTCCATGAGCAAACTGAAACGTTT
-TCATCGCTCTGGAGTGAATACCACGACGATTTCCGGCAGTTTCTACACATATATTCGCAA
-GATGTGGCGTGTTACGGTGAAAACACGGCCTATTTCCCTAAAGGGTTTATTGAGAATATG
-TTT
->contig_35_polypolish:4787-5644 strand:- aac(3)-IIe aminoglycoside N-acetyltransferase AAC(3)-IIe
-ATGCATACGCGGAAGGCAATAACGGAGGCAATTCGAAAATTAGGAGTCCAAACCGGTGAC
-CTGTTGATGGTGCATGCCTCACTTAAAGCGATTGGTCCGGTCGAAGGAGGAGCGGAGACG
-GTCGTTGCCGCGTTACGCTCCGCGGTTGGGCCGACTGGCACTGTGATGGGATACGCGTCG
-TGGGACCGATCACCCTACGAGGAGACTCTGAATGGCGCTCGGTTGGATGACAAAGCCCGC
-CGTACCTGGCCGCCGTTCGATCCCGCAACGGCCGGGACTTACCGTGGGTTCGGCCTGCTG
-AATCAATTTCTGGTTCAAGCCCCCGGCGCGCGGCGCAGCGCGCACCCCGATGCATCGATG
-GTCGCGGTTGGTCCGCTAGCTGAAACGCTGACGGAGCCTCACGAACTCGGTCACGCCTTG
-GGGGAAGGGTCGCCCGTCGAGCGGTTCGTCCGCCTTGGCGGGAAGGCCCTGCTGTTGGGT
-GCGCCGCTAAACTCCGTTACCGCATTGCACTACGCCGAGGCGGTTGCGGATATCCCCAAC
-AAACGATGGGTGACGTATGAGATGCCGATGCTTGGAAGAAACGGTGAAGTCGCCTGGAAA
-ACGGCATCAGAATACGATTCAAACGGCATTCTCGATTGCTTTGCTATCGAAGGAAAGCCG
-GATGCGGTCGAAACTATAGCAAATGCTTACGTGAAGCTCGGTCGCCATCGAGAAGGTGTC
-GTGGGCTTTGCTCAGTGCTACCTGTTCGACGCGCAGGACATCGTGACGTTCGGCGTCACC
-TATCTTGAGAAGCACTTCGGAGCCACTCCGATCGTGCCAGCACACGAAGCCGCCCAGCGC
-TCTTGCGAGCCTTCCGGT
->contig_36_polypolish:9168-9608 strand:+ blaSHV SHV family class A beta-lactamase
-ATGCGTTATATTCGCCTGTGTATTATCTCCCTGTTAGCCACCCTGCCGCTGGCGGTACAC
-GCCAGCCCGCAGCCGCTTGAGCAAATTAAACAAAGCGAAAGCCAGCTGTCGGGCCGCGTA
-GGCATGATAGAAATGGATCTGGCCAGCGGCCGCACGCTGACCGCCCGGCGCGCCGATGAA
-CGCTTTCCCATGATGAGCACCTTTAAAGTAGTGCTCTGCGGCGCAGTGCTGGCGCGGGTG
-GATGCCGGTGACGAACAGCTGGAGCGAAAGATCCACTATCGCCAGCAGGATCTGGTGGAC
-TACTCGCCGGTCAGCGAAAAACACCTTGCCGACGGCATGACGGTCGGCGAACTCTGCGCC
-GCCGCCATTACCATGAGCGATAACAGCGCCGCCAATCTGCTGCTGGCCACCGTCGGCGGC
-CCCGCAGGATTGACTGCCTTT
->contig_36_polypolish:9587-10024 strand:+ blaSHV SHV family class A beta-lactamase
-CCCCGCAGGATTGACTGCCTTTTGCGCCAGATCGGCGACAACGTCACCCGCCTTGACCGC
-TGGGAAACGGAACTGAATGAGGCGCTTCCCGGCGACGCCCGCGACACCACTACCCCGGCC
-AGCATGGCCGCGACCCTGCGCAAGCTGCTGACCAGCCAGCGTCTGAGCGCCCGTTCGCAA
-CGGCAGCTGCTGCAGTGGATGGTGGACGATCGGGTCGCCGGACCGTTGATCCGCTCCGTG
-CTGCCGGCGGGCTGGTTTATCGCCGATAAGACCGGAGCTAGCAAGCGGGGTGCGCGCGGG
-ATTGTCGCCCTGCTTGGCCCGAATAACAAAGCAGAGCGCATTGTGGTGATTTATCTGCGG
-GATACGCCGGCGAGCATGGCCGAGCGAAATCAGCAAATCGCCGGGATCGGCGCGGCGCTG
-ATCGAGCACTGGCAACGC
->contig_37_polypolish:18-569 strand:+ aac(6')-Ib3 aminoglycoside N-acetyltransferase AAC(6')-Ib3
-GTGACCAACAGCAACGATTCCGTCACACTGCGCCTCATGACTGAGCATGACCTTGCGATG
-CTCTATGAGTGGCTAAATCGATCTCATATCGTCGAGTGGTGGGGCGGAGAAGAAGCACGC
-CCGACACTTGCTGACGTACAGGAACAGTACTTGCCAAGCGTTTTAGCGCAAGAGTCCGTC
-ACTCCATACATTGCAATGCTGAATGGAGAGCCGATTGGGTATGCCCAGTCGTACGTTGCT
-CTTGGAAGCGGGGACGGATGGTGGGAAGAAGAAACCGATCCAGGAGTACGCGGAATAGAC
-CAGTTACTGGCGAATGCATCACAACTGGGCAAAGGCTTGGGAACCAAGCTGGTTCGAGCT
-CTGGTTGAGTTGCTGTTCAATGATCCCGAGGTCACCAAGATCCAAACGGACCCGTCGCCG
-AGCAACTTGCGAGCGATCCGATGCTACGAGAAAGCGGGGTTTGAGAGGCAAGGTACCGTA
-ACCACCCCAGATGGTCCAGCCGTGTACATGGTTCAAACACGCCAGGCATTCGAGCGAACA
-CGCAGTGATGCC
->contig_37_polypolish:3006-3863 strand:+ blaTEM-1 broad-spectrum class A beta-lactamase TEM-1
-ATGAGTATTCAACATTTTCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCT
-GTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCA
-CGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCC
-GAAGAACGTTTTCCAATGATGAGCACTTTTAAAGTTCTGCTATGTGGTGCGGTATTATCC
-CGTGTTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTG
-GTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTA
-TGCAGTGCTGCCATAACCATGAGTGATAACACTGCTGCCAACTTACTTCTGACAACGATC
-GGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTT
-GATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATG
-CCTGCAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCT
-TCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGC
-TCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCT
-CGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTAC
-ACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCC
-TCACTGATTAAGCATTGG
->contig_37_polypolish:642-1424 strand:+ aadA1 ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1
-ATGAGGGAAGCGGTGATCGCCGAAGTATCGACTCAACTATCAGAGGTAGTTGGCGTCATC
-GAGCGCCATCTCGAACCGACGTTGCTGGCCGTACATTTGTACGGCTCCGCAGTGGATGGC
-GGCCTGAAGCCACACAGTGATATTGATTTGCTGGTTACGGTGACCGTAAGGCTTGATGAA
-ACAACGCGGCGAGCTTTGATCAACGACCTTTGGAAACTTCGGCTTCCCGGAGAGAGCGAG
-ATTCTCCGCGCTGTAGAAGTCACCATTGTTGTGCACGACGACATCATTCCGTGGCGTTAT
-CCAGCTAAGCGCGAACTGCAATTTGGAGAATGGCAGCGCAATGACATTCTTGCAGGTATC
-TTCGAGCCAGCCACGATCGACATTGATCTGGCTATCTTGCTGACAAAAGCAAGAGAACAT
-AGCGTTGCCTTGGTAGGTCCAGCGGCGGAGGAACTCTTTGATCCGGTTCCTGAACAGGAT
-CTATTTGAGGCGCTAAATGAAACCTTAACGCTATGGAACTCGCCGCCCGACTGGGCTGGC
-GATGAGCGAAATGTAGTGCTTACGTTGTCCCGCATTTGGTACAGCGCAGTAACCGGCAAA
-ATCGCGCCGAAGGATGTCGCTGCCGACTGGGCAATGGAGCGCCTGCCGGCCCAGTATCAG
-CCCGTCATACTTGAAGCTAGGCAGGCTTATCTTGGACAAGAAGATCGCTTGGCCTCGCGC
-GCAGATCAGTTGGAAGAATTTGTTCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGC
-AAA
->contig_37_polypolish:8924-9133 strand:- merC organomercurial transporter MerC
-CTTGAGCCAGTACGAGGACTGTTCATCAGCCGCCTGCTGCCGCTGTTTGCCGCGCTGGCC
-TTCTCGGCGAACGCGCTGGGTTGGTTCAGTCATCGGCAATGGCTGCGCAGTCTGCTCGGC
-ATGATCGGCCCGGCCATCGTGTTTGCGGCCACGGTCTGGCTGCTCGGCAACTGGTGGACG
-GCGAACCTGATGTACGTCGGCACCGGCCTT
->contig_39_polypolish:3496-3825 strand:- qacE quaternary ammonium compound efflux SMR transporter QacE
-ATGAAAGGCTGGCTTTTTCTTGTTATCGCAATAGTTGGCGAAGTAATCGCAACATCCGCA
-TTAAAATCTAGCGAGGGCTTTACTAAGCTTGCCCCTTCCGCCGTTGTCATAATCGGTTAT
-GGCATCGCATTTTATTTTCTTTCTCTGGTTCTGAAATCCATCCCTGTCGGTGTTGCTTAT
-GCAGTCTGGTCGGGACTCGGCGTCGTCATAATTACAGCCATTGCCTGGTTGCTTCATGGG
-CAAAAGCTTGATGCGTGGGGCTTTGTAGGTATGGGGCTCATAGTTAGTGGTGTAGTAGTT
-TTAAACTTGCTTTCCAAAGCAAGTGCCCAC
->contig_39_polypolish:4010-4327 strand:- dfrA30 trimethoprim-resistant dihydrofolate reductase DfrA30
-GGGGCGCTCCCCAATAGGAAATACGCGGTCGTTACTCGCTCAGCTCGGACGGCCAATAAT
-GACAACGTAGTAGTATTCCCGTCGATCGAAGAGGCCATGGGCGGTCTAGCTAAACTCACC
-GGTCACGTTATAGTGTCTGGTGGCGGGGAGATTTACAGAGAAACGTTGCCCATGGCCTCT
-ACGCTCCATGTATCGACGATCGACATTGAGCCAGAAGGGGATGTTTTCTTCCCGAATATT
-CCCAACTTCTTCGAAGTTGTTTTTGAGCAACATTTTAGTTCAAACATTAACTATTGCTAT
-CAAATTTGGAAAAAGGGT
->contig_40_polypolish:2574-3359 strand:+ aph(3'')-Ib aminoglycoside O-phosphotransferase APH(3'')-Ib
-ATATTTTTTGGTGAATCGCATTCTGACTGGTTGCCTGTCAGAGGCGGAGAATCTGGTGAT
-TTTGTTTTTCGACGTGGTGACGGGCATGCCTTCGCGAAAATCGCACCTGCTTCCCGCCGC
-GGTGAGCTCGCTGGAGAGCGTGACCGCCTCATTTGGCTCAAAGGTCGAGGTGTGGCTTGC
-CCCGAGGTGATCAACTGGCAGGAGGAACAGGAGGGTGCATGCTTGGTGATAACGGCAATT
-CCGGGAGTACCGGCGGCTGATCTGTCTGGAGCGGATTTGCTCAAAGCGTGGCCGTCAATG
-GGGCAGCAACTTGGCGCTGTTCACAGCCTATCGGTTGATCAATGTCCGTTTGAGCGCAGG
-CTGTCGCGAATGTTCGGACGCGCCGTTGATGTGGTGTCCCGCAATGCCGTCAATCCCGAC
-TTCTTACCGGACGAGGACAAGAGTACGCCGCAGCTCGATCTTTTGGCTCGTGTCGAACGA
-GAGCTACCGGTGCGGCTCGACCAAGAGCGCACCGATATGGTTGTTTGCCATGGTGATCCC
-TGCATGCCGAACTTCATGGTGGACCCTAAAACTCTTCAATGCACGGGTCTGATCGACCTT
-GGGCGGCTCGGAACAGCAGATCGCTATGCCGATTTGGCACTCATGATTGCTAACGCCGAA
-GAGAACTGGGCAGCGCCAGATGAAGCAGAGCGCGCCTTCGCTGTCCTATTCAATGTATTG
-GGGATCGAAGCCCCCGACCGCGAACGCCTTGCCTTCTATCTGCGATTGGACCCTCTGACT
-TGGGGT
->contig_40_polypolish:3555-4103 strand:+ aph(6)-Id aminoglycoside O-phosphotransferase APH(6)-Id
-GGAGCAGTCCGGTTGCTCGGTCGTGAGAACAATCTGATGTTGCTCGAATATGCCGGGGAG
-CGAATGCTCTCTCACATCGTTGCCGAGCACGGCGACTACCGAGCGACCGAAATTGCAGCG
-GAACTAATGGCGAAGCTGTATGCCGCATCTGAGGAACCCCTGCCTTCTGCCCTTCTCCCG
-ATCCGGGATCGCTTTGCAGCTTTGTTTCAGCGGGCGCGCGATGATCAAAACGCAGGTTGT
-CAAACTGACTACGTCCACGCGGCGATTATAGCCGATCAAATGATGAGCAATGCCTCGGAA
-CTGCGTGGGCTACATGGCGATCTGCATCATGAAAACATCATGTTCTCCAGTCGCGGCTGG
-CTGGTGATAGATCCCGTCGGTCTGGTCGGTGAAGTGGGCTTTGGCGCCGCCAATATGTTC
-TACGATCCGGCTGACAGAGACGACCTTTGTCTCGATCCTAGACGCATTGCACAGATGGCG
-GACGCATTCTCTCGTGCGCTGGACGTCGATCCGCGTCGCCTGCTCGACCGTGCGTACGCT
-TATGGGTGC
->contig_40_polypolish:632-1258 strand:+ aph(3')-Ia aminoglycoside O-phosphotransferase APH(3')-Ia
-ATGAGCCATATTCAACGGGAAACGTCTTGCTCGAGGCCGCGATTAAATTCCAACATGGAT
-GCTGATTTATATGGGTATAAATGGGCTCGCGATAATGTCGGGCAATCAGGTGCGACAATC
-TATCGATTGTATGGGAAGCCCGATGCGCCAGAGTTGTTTCTGAAACATGGCAAAGGTAGC
-GTTGCCAATGATGTTACAGATGAGATGGTCAGACTAAACTGGCTGACGGAATTTATGCCT
-CTTCCGACCATCAAGCATTTTATCCGTACTCCTGATGATGCATGGTTACTCACCACTGCG
-ATCCCCGGGAAAACAGCATTCCGGGTATTAGAAGAATATCCTGATTCAGGTGAAAATATT
-GTTGATGCGCTGGCAGTGTTCCTGCGCCGGTTGCATTCGATTCCTGTTTGTAATTGTCCT
-TTTAACAACGATCGCGTATTTCGTCTCGCTCAGGCGCAATCACGAATGAATAACGGTTTG
-GTTGATGCGAGTGATTTTGATGACGAGCGTAATGGCTGGCCTGTTGAACAAGTCTGGAAA
-GAAATGCATAAGCTTTTGCCATTCTCACCGGATTCAGTCGTCACTCATGGTGATTTCTCA
-CTTGATAACCTTATTTTTGACGAGGGA
->contig_41_polypolish:100023-100541 strand:- terD tellurium resistance membrane protein TerD
-ATGAGCGTTTCACTATCTAAAGGCGGCAACGTTTCCCTGAGCAAAACCGCGCCAAGCATG
-AAAAACGTGCTGGTTGGCCTTGGCTGGGATGCACGTTCTACGGACGGTCAGGACTTTGAC
-CTCGATGCTTCCGCATTTCTGCTGGCAGCCAATGGCAAGGTTCGTGGCGATGCAGATTTC
-ATTTTCTATAACAACCTGAAATCTGCTGATGGTTCCGTTACTCATACCGGTGATAACCGT
-ACCGGTGAAGGTGATGGCGACGATGAATCCCTCAAAATCAAACTGGACGCGGTACACGGG
-GATGTCGACAAAATTATTTTCGTTGTCACTATCCATGATGCTCAGGCTCGTCGCCAGAGC
-TTCGGTCAGGTTTCCGGCGCATTTATCCGTCTGGTGAATGATGACAATCAGACTGAAGTT
-GCTCGCTACGATCTGACAGAAGACGCTTCTACTGAAACTGCCATGCTGTTTGGGGAGCTG
-TATCGTCACAACGGAGAATGGAAATTCCGTGCGGTTGGC
+>NC_010410.1:1184560-1185708 strand:- blaADC-11 extended-spectrum class C beta-lactamase ADC-11
+ATGCGATTTAAAAAAATTTCTTGTCTACTTTTATCCCCGCTTTTTATTTTTAGTACCTCA
+ATTTATGCGGGCAATACACCAAAAGACCAAGAAATTAAAAAACTGGTAGATCAAAACTTT
+AAACCGTTATTAGAAAAATATGATGTGCCAGGTATGGCTGTGGGTGTTATTCAAAATAAT
+AAAAAGTATGAAATGTATTATGGTCTTCAATCTGTTCAAGATAAAAAAGCCGTAAATCGC
+AGTACCATTTTTGAGCTAGGTTCTGTCAGTAAATTATTTACCGCGACAGCAGGTGGATAT
+GCAAAAAATAAAGGAAAAATCTCTTTTGACGATACGCCTGGTAAATATTGGAAAGAACTA
+AAAAACACACCGATTGACCAAGTTAACTTACTTCAACTCGCGACGTATACAAGTGGTAAC
+CTTGCCTTGCAGTTTCCAGATGAAGTACAAACAGACCAACAAGTTTTAACTTTTTTCAAA
+GACTGGCAACCTAAAAACCCAATCGGTGAATACAGACAATATTCAAATCCAAGTATTGGC
+CTATTTGGAAAGGTTGTGGCTTTGTCTATGAATAAACCTTTCGACCAAGTCTTAGAAAAA
+ACAATTTTTCCGGCCCTTGGCTTAAAACATAGCTATGTAAATGTACCTAAGACCCAGATG
+CAAAACTATGCATTTGGTTATAACCAAGAAAATCAGCCGATTCGAGTTAACCCCGGCCCA
+CTCGATGCCCCTGCATATGGCGTCAAATCGACACTACCCGACATGTTGAGTTTTATTCAT
+GCCAACCTTAACCCACAGAAATATCCGGCTGATATTCAACGGGCAATTAATGAAACACAT
+CAAGGGTTCTATCAAGTAAATACCATGTATCAGGCACTCGGTTGGGAAGAGTTTTCTTAT
+CCGGCAACGTTACAAACTTTATTAGACAGTAATTCAGAACAGATTGTGATGAAACCTAAT
+AAAGTGACTGCTATTTCAAAGGAACCTTCAGTTAAGATGTACCATAAAACTGGCTCAACC
+AACGGTTTCGGAACATATGTAGTGTTTATTCCTAAAGAAAATATTGGCTTAGTCATGTTA
+ACCAATAAACGTATTCCAAATGAAGAGCGCATTAAGGCAGCTTATGCTGTGCTGGATGCA
+ATAAAGAAA
+>NC_10410.1:1580523-1581998 strand:+ amvA multidrug efflux MFS transporter AmvA
+ATGCAAAAAAAATGGTTAATCCTGACAATTATCGTCCTCATTTATTTACCAGTTACGATT
+GATGCAACGGTGATGCATGTTGCAACACCATCTTTAAGTGCAGCATTGAATTTAACTGCC
+AATCAGCTTTTATGGATTATTGATATTTATTCGCTGATTATGGCGGGTTTGATTTTGCCG
+ATGGGTGCACTCGGTGATCGTATTGGCTTTAAAAAATTATTATTTATTGGAACCGCAGTT
+TTTGGTGTGGGTTCGTTAGCTGCGGCTTTTTCTCCAACTGCCTATGCCTTAATTGCTTCT
+CGTGCTATTTTAGGCCTAGGGGCAGCTATGCTTATTCCTGCCACTTTATCCGGTATCCGT
+AATGCTTTTACCGAAGAAAAGCAGAGAAATTTTGCACTTGGTATTTGGTCTACAGTAGGT
+GGAGGTGGAGCAGCTTTTGGTCCATTAGTCGGTGGTTTTGTATTAGAACACTTCCATTGG
+GGAGCTGTATTCCTCATTAATATCCCGATTATTTTAGCCGTTCTAGTTATGATCGTGATG
+ATCATTCCTAAACAACAAGAGAAAACTGATCAGCCAATTAACTTAGGGCAAGCTTTAGTT
+TTGGTTGTAGCAATTTTAAGCCTCATCTATTCAATTAAATCGGCTATGTATAACTTTTCG
+GTGCTCACGGTTGTGATGTTTGTGGTGGGTATAAGCACATTAATTCACTTCATTCGAAGC
+CAAAAAAGAGCTACGACACCAATGATTGATCTGGAGTTATTTAAACATCCAGTAATTTCT
+ACAAGTATTGTTATGGCTGTTGTTTCCATGATTGCTTTGGTTGGCTTTGAATTATTACTG
+TCTCAAGAGTTGCAGTTTGTACACGGGTTTTCTCCATTACAGGCGGCGATGTTTATTATT
+CCATTTATGATTGCAATTAGTTTAGGTGGTCCATTAGCAGGTATTTGTTTAAATAAATGG
+GGTTTACGTAGAGTATCGAGCCTAGGTATTTTAGTGAGCGCGCTCAGTTTATGGGGGCTT
+GCTCAGCTTAATTTTTCAACCGACCACTTTTTAGCATGGACATGTATGGTCTTTTTGGGC
+TTTAGCATTGAGATTGCCTTACTTGCCTCAACTGCTGCCATTATGTCATCTGTGCCCCCT
+CAAAAGGCGAGTGCAGCAGGTGCTATTGAGGGAATGGCCTATGAGCTTGGCGCTGGCTTA
+GGTGTTGCTATTTTTGGTTTAATGTTGTCTTGGTTTTATAGCCGCTCAATTATTTTGCCA
+GCCGAGCTTCCGTCAAACTTAATTGAAAAAGCGAGTATCTCGATTGGAGAAACCATGCAA
+TTAGCCTCTAATCTTGAAAATCCTTTAGGAGGGCAATTAATTGTAGTGGCGCAGCAAGCT
+TTTAGCTATGCCCATAGTTGGGTACTTACCCTCTCAGCGATCTGTTTCTTCCTTTTAACT
+GTATTTGTCTGGTTTAGTTTTCCGAAGAAAGTAAAT
\ No newline at end of file