Mercurial > repos > iuc > tooldistillator_summarize

annotate test-data/checkm2/checkm2.log @ 5:07d093aaf3b4 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 164bcc563f8495d4bb1ce14b574aef9287904f40
author iuc
date Thu, 10 Apr 2025 15:02:36 +0000
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07d093aaf3b4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 164bcc563f8495d4bb1ce14b574aef9287904f40
iuc
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1 [03/03/2025 11:20:03 AM] INFO: Running CheckM2 version 1.0.2
07d093aaf3b4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 164bcc563f8495d4bb1ce14b574aef9287904f40
iuc
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2 [03/03/2025 11:20:03 AM] INFO: Custom database path provided for predict run. Checking database at Database/CheckM2_database/uniref100.KO.1.dmnd...
07d093aaf3b4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 164bcc563f8495d4bb1ce14b574aef9287904f40
iuc
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3 [03/03/2025 11:20:10 AM] INFO: Running quality prediction workflow with 5 threads.
07d093aaf3b4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 164bcc563f8495d4bb1ce14b574aef9287904f40
iuc
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4 [03/03/2025 11:20:12 AM] INFO: Calling genes in 50 bins with 5 threads:
07d093aaf3b4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 164bcc563f8495d4bb1ce14b574aef9287904f40
iuc
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5 [03/03/2025 11:20:59 AM] WARNING: Skipping protein file batches/batch_0/checkm2/protein_files/bin_concoct_SASB_HSMA33OT.11.faa as it was empty.
07d093aaf3b4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 164bcc563f8495d4bb1ce14b574aef9287904f40
iuc
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6 [03/03/2025 11:20:59 AM] INFO: Calculating metadata for 49 bins with 5 threads:
07d093aaf3b4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 164bcc563f8495d4bb1ce14b574aef9287904f40
iuc
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7 [03/03/2025 11:20:59 AM] INFO: Annotating input genomes with DIAMOND using 5 threads
07d093aaf3b4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 164bcc563f8495d4bb1ce14b574aef9287904f40
iuc
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8 [03/03/2025 11:23:40 AM] INFO: Processing DIAMOND output
07d093aaf3b4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 164bcc563f8495d4bb1ce14b574aef9287904f40
iuc
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9 [03/03/2025 11:23:40 AM] INFO: Predicting completeness and contamination using ML models.
07d093aaf3b4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 164bcc563f8495d4bb1ce14b574aef9287904f40
iuc
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10 [03/03/2025 11:23:44 AM] INFO: Parsing all results and constructing final output table.
07d093aaf3b4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 164bcc563f8495d4bb1ce14b574aef9287904f40
iuc
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diff changeset
11 [03/03/2025 11:23:44 AM] INFO: CheckM2 finished successfully.