annotate test-data/pfam.domtblout @ 6:d0d4cef4f967 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 52d835f027b052a0a887be14a55faf9fa9e456ae"

#                                                                            --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession   tlen query name           accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
Fe-ADH               PF00465.18   364 CUFF.50.1.p1         -            423  8.2e-127  415.8   1.9   1   1  1.6e-128  9.4e-127  415.6   1.9     1   364    52   414    52   414 0.96 Iron-containing alcohol dehydrogenase
Fe-ADH_2             PF13685.5    250 CUFF.50.1.p1         -            423     9e-23   74.1   4.0   1   2   4.9e-22   2.9e-20   65.9   2.6     2   245    57   320    56   323 0.89 Iron-containing alcohol dehydrogenase
Fe-ADH_2             PF13685.5    250 CUFF.50.1.p1         -            423     9e-23   74.1   4.0   2   2       0.8        47   -3.6   0.0    27    60   355   388   350   399 0.70 Iron-containing alcohol dehydrogenase
Pantoate_ligase      PF02569.14   266 CUFF.50.1.p2         -            284  1.6e-104  341.7   0.0   1   1  4.4e-106  1.7e-104  341.6   0.0     4   265     5   278     2   279 0.91 Pantoate-beta-alanine ligase
FAD_syn              PF06574.11   158 CUFF.50.1.p2         -            284   0.00024   14.0   0.0   1   2     2e-05   0.00081   12.2   0.0    18    82    33    92    22   109 0.84 FAD synthetase
FAD_syn              PF06574.11   158 CUFF.50.1.p2         -            284   0.00024   14.0   0.0   2   2      0.31        12   -1.4   0.0   112   145   141   174   125   188 0.77 FAD synthetase
CTP_transf_like      PF01467.25   143 CUFF.50.1.p2         -            284   0.00046   13.3   0.0   1   1   2.2e-05   0.00086   12.4   0.0     9    43    33    66    29    73 0.88 Cytidylyltransferase-like
Pantoate_transf      PF02548.14   259 CUFF.50.1.p3         -            268  1.5e-104  341.9   0.0   1   1  2.8e-106  1.7e-104  341.7   0.0     2   258     6   261     5   262 0.99 Ketopantoate hydroxymethyltransferase
Asp_Glu_race         PF01177.21   224 CUFF.50.1.p3         -            268   4.5e-06   19.6   0.0   1   1   1.4e-07   8.5e-06   18.6   0.0    49    98   157   205   141   212 0.87 Asp/Glu/Hydantoin racemase
Chitin_synth_1       PF01644.16   163 CUFF.60.2.p1         -            844   2.4e-83  270.9   0.2   1   1   2.1e-84   4.2e-83  270.1   0.2     1   163   196   358   196   358 1.00 Chitin synthase
Chitin_synth_1N      PF08407.10    73 CUFF.60.2.p1         -            844   6.2e-29   92.8   0.1   1   1   7.6e-30   1.5e-28   91.6   0.1     2    73   124   195   123   195 0.96 Chitin synthase N-terminal
Chitin_synth_2       PF03142.14   527 CUFF.60.2.p1         -            844   5.4e-24   77.5   9.9   1   4         1        20   -3.5   0.0    27    49   190   212   180   222 0.78 Chitin synthase
Chitin_synth_2       PF03142.14   527 CUFF.60.2.p1         -            844   5.4e-24   77.5   9.9   2   4      0.81        16   -3.2   0.0   236   264   242   270   225   278 0.78 Chitin synthase
Chitin_synth_2       PF03142.14   527 CUFF.60.2.p1         -            844   5.4e-24   77.5   9.9   3   4   1.7e-22   3.4e-21   68.3   0.0   203   433   335   576   320   600 0.76 Chitin synthase
Chitin_synth_2       PF03142.14   527 CUFF.60.2.p1         -            844   5.4e-24   77.5   9.9   4   4   1.7e-05   0.00033   12.2   3.7   434   491   665   722   612   732 0.87 Chitin synthase
Glyco_trans_2_3      PF13632.5    197 CUFF.60.2.p1         -            844   3.4e-11   36.3   7.3   1   1   9.7e-12   1.9e-10   33.9   7.3     3   191   338   564   336   713 0.80 Glycosyl transferase family group 2
Glyco_tranf_2_3      PF13641.5    230 CUFF.60.2.p1         -            844   0.00015   14.6   0.0   1   2      0.58        11   -1.4   0.0    90   110   237   257   197   265 0.73 Glycosyltransferase like family 2
Glyco_tranf_2_3      PF13641.5    230 CUFF.60.2.p1         -            844   0.00015   14.6   0.0   2   2   2.9e-05   0.00056   12.7   0.0    83   229   329   507   309   508 0.89 Glycosyltransferase like family 2
MVP_shoulder         PF11978.7    118 CUFF.60.2.p1         -            844   0.00071   12.5   0.0   1   1   0.00011    0.0022   11.0   0.0    40   100    65   124    55   134 0.84 Shoulder domain
GHMP_kinases_N       PF00288.25    66 CUFF.60.2.p2         -            405   1.3e-17   56.7   4.8   1   2      0.22       6.5    0.1   0.1    19    40    25    47    22    57 0.68 GHMP kinases N terminal domain
GHMP_kinases_N       PF00288.25    66 CUFF.60.2.p2         -            405   1.3e-17   56.7   4.8   2   2   4.6e-19   1.4e-17   56.7   1.6     2    66   126   203   125   203 0.87 GHMP kinases N terminal domain
GHMP_kinases_C       PF08544.12    85 CUFF.60.2.p2         -            405   2.3e-08   27.3   0.0   1   1   2.6e-09   7.7e-08   25.6   0.0     8    66   284   338   272   349 0.90 GHMP kinases C terminal
GalKase_gal_bdg      PF10509.8     49 CUFF.60.2.p2         -            405   0.00016   14.2   0.0   1   1     1e-05    0.0003   13.3   0.0    12    44     5    37     2    41 0.90 Galactokinase galactose-binding signature
FPP                  PF05911.10   866 CUFF.60.2.p2         -            405    0.0011   10.2   0.1   1   1   5.3e-05    0.0016    9.6   0.1   518   597   222   301   197   316 0.76 Filament-like plant protein, long coiled-coil
Chitin_synth_1       PF01644.16   163 CUFF.60.1.p1         -            844   2.4e-83  270.9   0.2   1   1   2.1e-84   4.2e-83  270.1   0.2     1   163   196   358   196   358 1.00 Chitin synthase
Chitin_synth_1N      PF08407.10    73 CUFF.60.1.p1         -            844   6.2e-29   92.8   0.1   1   1   7.6e-30   1.5e-28   91.6   0.1     2    73   124   195   123   195 0.96 Chitin synthase N-terminal
Chitin_synth_2       PF03142.14   527 CUFF.60.1.p1         -            844   5.4e-24   77.5   9.9   1   4         1        20   -3.5   0.0    27    49   190   212   180   222 0.78 Chitin synthase
Chitin_synth_2       PF03142.14   527 CUFF.60.1.p1         -            844   5.4e-24   77.5   9.9   2   4      0.81        16   -3.2   0.0   236   264   242   270   225   278 0.78 Chitin synthase
Chitin_synth_2       PF03142.14   527 CUFF.60.1.p1         -            844   5.4e-24   77.5   9.9   3   4   1.7e-22   3.4e-21   68.3   0.0   203   433   335   576   320   600 0.76 Chitin synthase
Chitin_synth_2       PF03142.14   527 CUFF.60.1.p1         -            844   5.4e-24   77.5   9.9   4   4   1.7e-05   0.00033   12.2   3.7   434   491   665   722   612   732 0.87 Chitin synthase
Glyco_trans_2_3      PF13632.5    197 CUFF.60.1.p1         -            844   3.4e-11   36.3   7.3   1   1   9.7e-12   1.9e-10   33.9   7.3     3   191   338   564   336   713 0.80 Glycosyl transferase family group 2
Glyco_tranf_2_3      PF13641.5    230 CUFF.60.1.p1         -            844   0.00015   14.6   0.0   1   2      0.58        11   -1.4   0.0    90   110   237   257   197   265 0.73 Glycosyltransferase like family 2
Glyco_tranf_2_3      PF13641.5    230 CUFF.60.1.p1         -            844   0.00015   14.6   0.0   2   2   2.9e-05   0.00056   12.7   0.0    83   229   329   507   309   508 0.89 Glycosyltransferase like family 2
MVP_shoulder         PF11978.7    118 CUFF.60.1.p1         -            844   0.00071   12.5   0.0   1   1   0.00011    0.0022   11.0   0.0    40   100    65   124    55   134 0.84 Shoulder domain
GHMP_kinases_N       PF00288.25    66 CUFF.60.1.p2         -            354   5.2e-18   58.0   1.6   1   1   2.7e-19   1.1e-17   57.0   1.6     2    66    75   152    74   152 0.87 GHMP kinases N terminal domain
GHMP_kinases_C       PF08544.12    85 CUFF.60.1.p2         -            354   1.8e-08   27.7   0.0   1   1   1.6e-09   6.2e-08   25.9   0.0     8    66   233   287   221   298 0.90 GHMP kinases C terminal
FPP                  PF05911.10   866 CUFF.60.1.p2         -            354   0.00084   10.5   0.1   1   1   3.1e-05    0.0012    9.9   0.1   518   597   171   250   146   265 0.76 Filament-like plant protein, long coiled-coil
DUF1989              PF09347.9    167 CUFF.34.1.p1         -            303   1.9e-57  186.4   0.0   1   1   2.1e-59   2.5e-57  186.1   0.0     2   167    58   231    57   231 0.98 Domain of unknown function (DUF1989)
Acetyltransf_10      PF13673.6    127 CUFF.34.1.p2         -            146   2.1e-20   65.9   0.0   1   1   1.9e-21   2.4e-20   65.7   0.0    32   123    50   146    28   146 0.90 Acetyltransferase (GNAT) domain
Acetyltransf_1       PF00583.24   117 CUFF.34.1.p2         -            146   5.9e-15   48.5   0.0   1   1   5.3e-16   6.9e-15   48.3   0.0    18   117    35   129    16   129 0.77 Acetyltransferase (GNAT) family
Acetyltransf_7       PF13508.6     76 CUFF.34.1.p2         -            146   5.2e-13   42.3   0.0   1   1   5.3e-14     7e-13   41.8   0.0     5    76    29   131    25   131 0.68 Acetyltransferase (GNAT) domain
Acetyltransf_9       PF13527.6    128 CUFF.34.1.p2         -            146   2.8e-07   23.6   0.0   1   1   7.9e-08     1e-06   21.8   0.0    72   127    72   131    11   132 0.71 Acetyltransferase (GNAT) domain
Acetyltransf_5       PF13444.5    101 CUFF.34.1.p2         -            146   5.3e-07   23.3   0.0   1   1     9e-08   1.2e-06   22.2   0.0     1    82    25   102    25   123 0.81 Acetyltransferase (GNAT) domain
Acetyltransf_15      PF17013.4    210 CUFF.34.1.p2         -            146   5.8e-06   18.8   0.1   1   1   1.2e-06   1.5e-05   17.4   0.1    28   145     5   140     1   146 0.81 Putative acetyl-transferase
FR47                 PF08445.9     86 CUFF.34.1.p2         -            146   7.7e-06   18.8   0.0   1   1   8.5e-07   1.1e-05   18.3   0.0    18    81    70   133    53   137 0.85 FR47-like protein
Acetyltransf_CG      PF14542.5     80 CUFF.34.1.p2         -            146   1.5e-05   18.0   0.0   1   1   2.2e-06   2.8e-05   17.2   0.0     8    56    57   105    50   108 0.87 GCN5-related N-acetyl-transferase
GNAT_acetyltr_2      PF13718.5    227 CUFF.34.1.p2         -            146   0.00038   12.8   0.0   1   1   3.9e-05   0.00051   12.4   0.0    94   131    72   109    67   128 0.78 GNAT acetyltransferase 2
Fungal_trans         PF04082.17   267 CUFF.41.1.p1         -            326     2e-42  137.9   0.2   1   1   2.3e-44   2.8e-42  137.5   0.2     1   200   120   311   120   324 0.93 Fungal specific transcription factor domain
REPA_OB_2            PF16900.4     98 CUFF.41.1.p2         -            295    0.0006   12.7   0.0   1   1     9e-06    0.0011   11.9   0.0    50    96   143   196   134   198 0.81 Replication protein A OB domain
Na_H_Exchanger       PF00999.20   381 CUFF.13.2.p1         -            291   1.3e-42  138.8   8.5   1   1   2.8e-44   1.6e-42  138.5   8.5     1   198    83   291    83   291 0.97 Sodium/hydrogen exchanger family
PsbN                 PF02468.14    43 CUFF.13.2.p1         -            291   0.00026   13.8   0.0   1   1   1.6e-05   0.00093   12.0   0.0    27    43   118   136   107   136 0.84 Photosystem II reaction centre N protein (psbN)
Na_H_Exchanger       PF00999.20   381 CUFF.13.1.p2         -            119   4.6e-27   87.6   2.1   1   1   4.3e-29   5.1e-27   87.5   2.1    82   198     1   119     1   119 0.97 Sodium/hydrogen exchanger family
Na_H_Exchanger       PF00999.20   381 CUFF.13.3.p1         -            194     1e-15   50.3   1.9   1   1   2.4e-17   1.4e-15   49.8   1.9     1    93    83   184    83   185 0.96 Sodium/hydrogen exchanger family
PsbN                 PF02468.14    43 CUFF.13.3.p1         -            194   0.00018   14.3   0.0   1   1     9e-06   0.00053   12.8   0.0    27    43   118   136   106   136 0.85 Photosystem II reaction centre N protein (psbN)
GLEYA                PF10528.8     91 CUFF.11.1.p1         -            294   2.9e-20   65.5   3.2   1   2       1.8   1.1e+02   -3.6   0.0    70    84    13    27     3    33 0.60 GLEYA domain
GLEYA                PF10528.8     91 CUFF.11.1.p1         -            294   2.9e-20   65.5   3.2   2   2   6.1e-22   3.6e-20   65.2   2.1     2    90   157   253   156   254 0.92 GLEYA domain
Orthopox_A5L         PF06193.10   271 CUFF.11.1.p1         -            294    0.0072    8.6   4.9   1   1   0.00017    0.0099    8.2   4.9   146   192     3    49     1    92 0.77 Orthopoxvirus A5L protein-like
DUF2868              PF11067.7    328 CUFF.9.1.p1          -            156    0.0008   11.7   0.3   1   1   1.1e-05    0.0013   11.1   0.3    47    74    97   123    92   126 0.94 Protein of unknown function (DUF2868)
Fungal_trans         PF04082.17   267 CUFF.38.1.p1         -            638   5.1e-28   90.7   6.2   1   2   9.6e-29   5.6e-27   87.3   5.9     3   234   203   429   201   459 0.81 Fungal specific transcription factor domain
Fungal_trans         PF04082.17   267 CUFF.38.1.p1         -            638   5.1e-28   90.7   6.2   2   2     0.017         1    1.2   0.0     1    23   471   492   471   504 0.87 Fungal specific transcription factor domain
Zn_clus              PF00172.17    40 CUFF.38.1.p1         -            638   9.2e-10   31.5  13.0   1   1   2.6e-11   1.5e-09   30.8  13.0     1    39     5    42     5    44 0.91 Fungal Zn(2)-Cys(6) binuclear cluster domain
AA_permease_2        PF13520.5    425 CUFF.38.1.p2         -            551   2.5e-56  184.1  57.6   1   1   5.4e-58   3.2e-56  183.8  57.6     1   425    48   491    48   491 0.85 Amino acid permease
AA_permease          PF00324.20   479 CUFF.38.1.p2         -            551   6.8e-25   80.4  51.2   1   1   1.5e-26   9.1e-25   80.0  51.2    19   463    70   500    53   509 0.76 Amino acid permease
MatE                 PF01554.17   161 CUFF.38.1.p3         -            456   1.1e-63  206.6  23.8   1   2   1.6e-39   9.2e-38  122.3   4.7     1   161    17   177    17   177 0.99 MatE
MatE                 PF01554.17   161 CUFF.38.1.p3         -            456   1.1e-63  206.6  23.8   2   2   1.5e-29   8.6e-28   89.9  11.1     4   159   240   396   239   398 0.98 MatE
Polysacc_synt_C      PF14667.5    142 CUFF.38.1.p3         -            456   2.1e-09   30.5   3.6   1   4      0.34        20   -1.8   1.1    13    26    51    64    18   109 0.61 Polysaccharide biosynthesis C-terminal domain
Polysacc_synt_C      PF14667.5    142 CUFF.38.1.p3         -            456   2.1e-09   30.5   3.6   2   4   3.5e-11   2.1e-09   30.5   3.6     2   115   131   252   130   273 0.79 Polysaccharide biosynthesis C-terminal domain
Polysacc_synt_C      PF14667.5    142 CUFF.38.1.p3         -            456   2.1e-09   30.5   3.6   3   4      0.14       8.5   -0.6   2.6   109   136   295   326   266   332 0.55 Polysaccharide biosynthesis C-terminal domain
Polysacc_synt_C      PF14667.5    142 CUFF.38.1.p3         -            456   2.1e-09   30.5   3.6   4   4    0.0013     0.075    6.0   5.5     4    79   353   430   343   444 0.76 Polysaccharide biosynthesis C-terminal domain
Arginase             PF00491.20   280 CUFF.38.1.p4         -            374   3.6e-91  298.4   0.0   1   1   7.1e-93   4.2e-91  298.2   0.0     2   277    75   373    74   374 0.93 Arginase family
UPF0489              PF12640.6    178 CUFF.38.1.p4         -            374   0.00079   12.6   0.0   1   1   2.1e-05    0.0012   12.0   0.0     7    43   186   229   183   270 0.67 UPF0489 domain
RNA_POL_M_15KD       PF02150.15    36 CUFF.7.1.p1          -            134   5.2e-05   16.1   0.0   1   2   4.5e-05    0.0053    9.6   0.0    19    33    56    70    53    72 0.78 RNA polymerases M/15 Kd subunit
RNA_POL_M_15KD       PF02150.15    36 CUFF.7.1.p1          -            134   5.2e-05   16.1   0.0   2   2    0.0026       0.3    4.0   0.0     8    24   112   128   109   130 0.87 RNA polymerases M/15 Kd subunit
Amidohydro_1         PF01979.19   344 CUFF.27.1.p1         -            464   5.6e-82  268.6   0.4   1   1   1.1e-83   6.7e-82  268.4   0.4     1   343    57   422    57   423 0.96 Amidohydrolase family
Amidohydro_3         PF07969.10   473 CUFF.27.1.p1         -            464   4.5e-17   55.5   0.1   1   2   4.9e-05    0.0029   10.0   0.1     5    25    53    73    52    84 0.86 Amidohydrolase family
Amidohydro_3         PF07969.10   473 CUFF.27.1.p1         -            464   4.5e-17   55.5   0.1   2   2   3.4e-15     2e-13   43.4   0.0   265   472   213   423   165   424 0.75 Amidohydrolase family
SAUGI                PF06106.10   111 CUFF.27.1.p2         -            121   0.00079   12.5   0.8   1   2     0.001      0.12    5.5   0.1    66    92    12    38     3    50 0.79 S. aureus uracil DNA glycosylase inhibitor
SAUGI                PF06106.10   111 CUFF.27.1.p2         -            121   0.00079   12.5   0.8   2   2   0.00065     0.077    6.1   0.1    57    90    64    98    46   105 0.77 S. aureus uracil DNA glycosylase inhibitor
SnoaL_2              PF12680.6    102 CUFF.36.1.p1         -            131   8.3e-12   38.7   0.0   1   1   1.7e-13     1e-11   38.4   0.0     2   100    10   108     9   110 0.92 SnoaL-like domain
SnoaL                PF07366.11   126 CUFF.36.1.p1         -            131   7.1e-08   25.3   0.2   1   2    0.0013     0.077    5.8   0.0    45    64     7    26     3    28 0.89 SnoaL-like polyketide cyclase
SnoaL                PF07366.11   126 CUFF.36.1.p1         -            131   7.1e-08   25.3   0.2   2   2   8.6e-09   5.1e-07   22.5   0.1     5   110    14   107     9   114 0.90 SnoaL-like polyketide cyclase
malic                PF00390.18   182 CUFF.1.1.p1          -            122   2.2e-20   66.1   0.0   1   1   2.5e-22     3e-20   65.7   0.0     3    76    32   108    30   110 0.95 Malic enzyme, N-terminal domain
GDC-P                PF02347.15   430 CUFF.57.1.p1         -           1032  4.2e-215  707.3   0.0   1   3  3.4e-204    2e-202  665.5   0.0     2   430    66   504    65   504 0.99 Glycine cleavage system P-protein
GDC-P                PF02347.15   430 CUFF.57.1.p1         -           1032  4.2e-215  707.3   0.0   2   3   2.5e-13   1.4e-11   36.7   0.0    22   285   529   810   525   822 0.77 Glycine cleavage system P-protein
GDC-P                PF02347.15   430 CUFF.57.1.p1         -           1032  4.2e-215  707.3   0.0   3   3      0.02       1.2    0.7   0.0   332   373   840   881   836   926 0.78 Glycine cleavage system P-protein
Beta_elim_lyase      PF01212.20   293 CUFF.57.1.p1         -           1032   2.7e-06   19.7   0.0   1   1   8.8e-08   5.2e-06   18.8   0.0    29   201   619   786   611   886 0.76 Beta-eliminating lyase
DJ-1_PfpI            PF01965.23   165 CUFF.47.1.p1         -            199   3.7e-15   49.0   0.0   1   1   9.5e-17   5.6e-15   48.4   0.0    12   111    51   172    47   198 0.78 DJ-1/PfpI family
ThiJ_like            PF17124.4    196 CUFF.47.1.p1         -            199   1.7e-10   33.8   0.3   1   1     7e-11   4.2e-09   29.3   0.3     3   155    47   185    46   198 0.78 ThiJ/PfpI family-like
Hydantoinase_B       PF02538.13   516 CUFF.44.1.p1         -           1318    2e-215  708.9   0.1   1   1  8.4e-217  3.3e-215  708.2   0.1     1   516   749  1285   749  1285 0.98 Hydantoinase B/oxoprolinase
Hydantoinase_A       PF01968.17   291 CUFF.44.1.p1         -           1318  8.1e-107  349.6   0.2   1   2      0.81        32   -3.5   0.2    82    95     5    18     4    22 0.87 Hydantoinase/oxoprolinase
Hydantoinase_A       PF01968.17   291 CUFF.44.1.p1         -           1318  8.1e-107  349.6   0.2   2   2  2.1e-108  8.1e-107  349.6   0.2     1   290   239   540   239   541 0.98 Hydantoinase/oxoprolinase
Hydant_A_N           PF05378.12   178 CUFF.44.1.p1         -           1318   8.2e-66  214.0   1.6   1   2   3.4e-66   1.3e-64  210.0   0.0     1   178     4   220     4   220 0.98 Hydantoinase/oxoprolinase N-terminal region
Hydant_A_N           PF05378.12   178 CUFF.44.1.p1         -           1318   8.2e-66  214.0   1.6   2   2     0.019      0.73    2.4   0.6     2    14   325   337   324   355 0.82 Hydantoinase/oxoprolinase N-terminal region
MFS_1                PF07690.15   353 CUFF.37.1.p1         -            547   1.7e-41  135.1  27.5   1   2   4.4e-43   1.7e-41  135.1  27.5     2   349   113   492   112   497 0.82 Major Facilitator Superfamily
MFS_1                PF07690.15   353 CUFF.37.1.p1         -            547   1.7e-41  135.1  27.5   2   2      0.15       5.9   -1.5   0.1   230   256   500   529   493   543 0.53 Major Facilitator Superfamily
Sugar_tr             PF00083.23   452 CUFF.37.1.p1         -            547   7.7e-10   31.0  30.1   1   1   4.1e-11   1.6e-09   30.0  30.1    25   437   121   530   105   534 0.75 Sugar (and other) transporter
MFS_4                PF06779.13   363 CUFF.37.1.p1         -            547     6e-06   18.6   6.1   1   3      0.16       6.3   -1.2   0.2   146   206   101   156    98   157 0.65 Uncharacterised MFS-type transporter YbfB
MFS_4                PF06779.13   363 CUFF.37.1.p1         -            547     6e-06   18.6   6.1   2   3   5.1e-07     2e-05   16.9   0.5    38   175   152   288   132   311 0.84 Uncharacterised MFS-type transporter YbfB
MFS_4                PF06779.13   363 CUFF.37.1.p1         -            547     6e-06   18.6   6.1   3   3    0.0035      0.14    4.3   0.1   119   144   374   399   365   405 0.85 Uncharacterised MFS-type transporter YbfB
TPP_enzyme_N         PF02776.17   172 CUFF.32.1.p1         -            595   5.1e-39  126.5   0.0   1   2   5.4e-39   1.6e-37  121.7   0.1     1   170     9   183     9   185 0.94 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
TPP_enzyme_N         PF02776.17   172 CUFF.32.1.p1         -            595   5.1e-39  126.5   0.0   2   2      0.02      0.59    2.6   0.0   136   161   516   541   428   545 0.91 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
TPP_enzyme_C         PF02775.20   153 CUFF.32.1.p1         -            595     1e-26   86.5   0.6   1   3      0.03       0.9    2.2   0.0   115   153   132   172   107   172 0.80 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
TPP_enzyme_C         PF02775.20   153 CUFF.32.1.p1         -            595     1e-26   86.5   0.6   2   3       1.9        55   -3.6   0.1   112   124   234   246   227   252 0.76 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
TPP_enzyme_C         PF02775.20   153 CUFF.32.1.p1         -            595     1e-26   86.5   0.6   3   3   9.4e-27   2.8e-25   81.8   0.0    24   153   415   539   395   539 0.85 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
TPP_enzyme_M         PF00205.21   137 CUFF.32.1.p1         -            595   4.4e-24   77.7   0.0   1   1   2.9e-25   8.6e-24   76.8   0.0     3   113   207   316   205   325 0.90 Thiamine pyrophosphate enzyme, central domain
CO_dh                PF02552.15   168 CUFF.32.1.p1         -            595   5.5e-07   22.4   0.0   1   2      0.36        11   -1.3   0.0    18    41   130   154   125   156 0.80 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit
CO_dh                PF02552.15   168 CUFF.32.1.p1         -            595   5.5e-07   22.4   0.0   2   2     1e-07   2.9e-06   20.0   0.0    14    78   194   257   175   297 0.74 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit
DUF3288              PF11691.7     89 CUFF.32.1.p3         -            121    0.0001   15.3   0.0   1   1   1.4e-06   0.00016   14.6   0.0    17    62    72   117    68   119 0.90 Protein of unknown function (DUF3288)
MatE                 PF01554.17   161 CUFF.39.1.p1         -            456   1.1e-63  206.6  23.8   1   2   1.6e-39   9.2e-38  122.3   4.7     1   161    17   177    17   177 0.99 MatE
MatE                 PF01554.17   161 CUFF.39.1.p1         -            456   1.1e-63  206.6  23.8   2   2   1.5e-29   8.6e-28   89.9  11.1     4   159   240   396   239   398 0.98 MatE
Polysacc_synt_C      PF14667.5    142 CUFF.39.1.p1         -            456   2.1e-09   30.5   3.6   1   4      0.34        20   -1.8   1.1    13    26    51    64    18   109 0.61 Polysaccharide biosynthesis C-terminal domain
Polysacc_synt_C      PF14667.5    142 CUFF.39.1.p1         -            456   2.1e-09   30.5   3.6   2   4   3.5e-11   2.1e-09   30.5   3.6     2   115   131   252   130   273 0.79 Polysaccharide biosynthesis C-terminal domain
Polysacc_synt_C      PF14667.5    142 CUFF.39.1.p1         -            456   2.1e-09   30.5   3.6   3   4      0.14       8.5   -0.6   2.6   109   136   295   326   266   332 0.55 Polysaccharide biosynthesis C-terminal domain
Polysacc_synt_C      PF14667.5    142 CUFF.39.1.p1         -            456   2.1e-09   30.5   3.6   4   4    0.0013     0.075    6.0   5.5     4    79   353   430   343   444 0.76 Polysaccharide biosynthesis C-terminal domain
Transferase          PF02458.14   434 CUFF.2.1.p1          -            124   0.00031   12.3   0.0   1   1   3.1e-06   0.00037   12.1   0.0   348   403    49   107    37   111 0.76 Transferase family
Aminotran_5          PF00266.18   371 CUFF.40.1.p1         -            435   6.3e-47  153.1   0.0   1   1   1.8e-48   1.1e-46  152.3   0.0    41   369    59   376    25   378 0.89 Aminotransferase class-V
Aminotran_1_2        PF00155.20   363 CUFF.40.1.p1         -            435     5e-06   18.7   0.0   1   1   1.5e-07     9e-06   17.9   0.0    48   334    65   357    61   375 0.71 Aminotransferase class I and II
Fungal_trans         PF04082.17   267 CUFF.40.1.p2         -            326     2e-42  137.9   0.2   1   1   2.3e-44   2.8e-42  137.5   0.2     1   200   120   311   120   324 0.93 Fungal specific transcription factor domain
REPA_OB_2            PF16900.4     98 CUFF.40.1.p3         -            295    0.0006   12.7   0.0   1   1     9e-06    0.0011   11.9   0.0    50    96   143   196   134   198 0.81 Replication protein A OB domain
Amidohydro_1         PF01979.19   344 CUFF.26.1.p1         -            462   5.5e-82  268.7   0.4   1   1   1.1e-83   6.6e-82  268.4   0.4     1   343    55   420    55   421 0.96 Amidohydrolase family
Amidohydro_3         PF07969.10   473 CUFF.26.1.p1         -            462   4.5e-17   55.5   0.1   1   2   4.8e-05    0.0029   10.0   0.1     5    25    51    71    50    82 0.86 Amidohydrolase family
Amidohydro_3         PF07969.10   473 CUFF.26.1.p1         -            462   4.5e-17   55.5   0.1   2   2   3.4e-15     2e-13   43.4   0.0   265   472   211   421   163   422 0.75 Amidohydrolase family
SAUGI                PF06106.10   111 CUFF.26.1.p2         -            121   0.00079   12.5   0.8   1   2     0.001      0.12    5.5   0.1    66    92    12    38     3    50 0.79 S. aureus uracil DNA glycosylase inhibitor
SAUGI                PF06106.10   111 CUFF.26.1.p2         -            121   0.00079   12.5   0.8   2   2   0.00065     0.077    6.1   0.1    57    90    64    98    46   105 0.77 S. aureus uracil DNA glycosylase inhibitor
Fungal_trans         PF04082.17   267 CUFF.45.1.p1         -            586   3.1e-12   38.9   4.7   1   1   8.6e-13   1.3e-11   36.9   4.7     4   197   151   329   148   351 0.75 Fungal specific transcription factor domain
zf-C2H2              PF00096.25    23 CUFF.45.1.p1         -            586   6.1e-10   32.1   9.4   1   2   4.7e-06   6.9e-05   16.2   1.0     1    20    31    50    31    51 0.95 Zinc finger, C2H2 type
zf-C2H2              PF00096.25    23 CUFF.45.1.p1         -            586   6.1e-10   32.1   9.4   2   2   3.7e-07   5.5e-06   19.7   1.9     2    23    60    82    59    82 0.96 Zinc finger, C2H2 type
zf-C2H2_6            PF13912.5     27 CUFF.45.1.p1         -            586   3.2e-06   20.0   3.1   1   2   2.2e-07   3.2e-06   20.0   3.1     1    26    30    55    30    56 0.96 C2H2-type zinc finger
zf-C2H2_6            PF13912.5     27 CUFF.45.1.p1         -            586   3.2e-06   20.0   3.1   2   2         5        73   -3.5   0.6     4     7    61    64    60    65 0.86 C2H2-type zinc finger
zf-C2H2_4            PF13894.5     24 CUFF.45.1.p1         -            586   1.5e-05   18.6  12.9   1   2   0.00062    0.0092   10.0   4.0     1    20    31    50    31    53 0.89 C2H2-type zinc finger
zf-C2H2_4            PF13894.5     24 CUFF.45.1.p1         -            586   1.5e-05   18.6  12.9   2   2   7.1e-05     0.001   12.9   1.6     2    24    60    82    59    82 0.93 C2H2-type zinc finger
zf-H2C2_2            PF13465.5     26 CUFF.45.1.p1         -            586   0.00067   13.1  15.4   1   3    0.0024     0.035    7.6   0.4    12    26    28    42    26    42 0.83 Zinc-finger double domain
zf-H2C2_2            PF13465.5     26 CUFF.45.1.p1         -            586   0.00067   13.1  15.4   2   3    0.0004    0.0058   10.1   4.9     1    21    45    65    45    70 0.90 Zinc-finger double domain
zf-H2C2_2            PF13465.5     26 CUFF.45.1.p1         -            586   0.00067   13.1  15.4   3   3      0.33       4.9    0.9   0.1     2    10    74    83    74    89 0.70 Zinc-finger double domain
zf-C2H2_jaz          PF12171.7     27 CUFF.45.1.p1         -            586    0.0025   11.1   5.8   1   3    0.0014     0.021    8.2   0.2     2    21    31    50    30    51 0.92 Zinc-finger double-stranded RNA-binding
zf-C2H2_jaz          PF12171.7     27 CUFF.45.1.p1         -            586    0.0025   11.1   5.8   2   3     0.011      0.16    5.3   0.1     4    21    61    78    58    79 0.93 Zinc-finger double-stranded RNA-binding
zf-C2H2_jaz          PF12171.7     27 CUFF.45.1.p1         -            586    0.0025   11.1   5.8   3   3         8   1.2e+02   -3.8   0.1    10    16   166   172   165   172 0.83 Zinc-finger double-stranded RNA-binding
zf-Di19              PF05605.11    54 CUFF.45.1.p1         -            586     0.034    7.5   8.1   1   1   0.00016    0.0023   11.2   1.0     3    28    59    85    57    88 0.79 Drought induced 19 protein (Di19), zinc-binding
zf-TRAF              PF02176.17    60 CUFF.45.1.p1         -            586     0.036    7.8   9.9   1   2    0.0034      0.05    7.3   8.4     9    56    30    72    27    80 0.77 TRAF-type zinc finger
zf-TRAF              PF02176.17    60 CUFF.45.1.p1         -            586     0.036    7.8   9.9   2   2       2.6        39   -2.0   0.0    26    43   276   293   274   294 0.77 TRAF-type zinc finger
MFS_1                PF07690.15   353 CUFF.45.1.p2         -            499   1.6e-39  128.6  21.0   1   2   2.8e-41   1.6e-39  128.6  21.0     2   352    66   429    65   430 0.87 Major Facilitator Superfamily
MFS_1                PF07690.15   353 CUFF.45.1.p2         -            499   1.6e-39  128.6  21.0   2   2       0.2        12   -2.4   0.0   282   296   450   464   440   476 0.44 Major Facilitator Superfamily
DUF1129              PF06570.10   206 CUFF.45.1.p2         -            499    0.0015   10.9   1.9   1   2   6.9e-05    0.0041    9.5   0.7    88   189   128   229   124   236 0.73 Protein of unknown function (DUF1129)
DUF1129              PF06570.10   206 CUFF.45.1.p2         -            499    0.0015   10.9   1.9   2   2      0.17       9.8   -1.5   0.0   119   133   451   465   423   478 0.59 Protein of unknown function (DUF1129)
Ribosomal_S3Ae       PF01015.17   205 CUFF.54.1.p1         -            253   4.9e-93  303.3   3.9   1   1     2e-94   5.9e-93  303.1   3.9     2   205    16   221    15   221 0.99 Ribosomal S3Ae family
SUI1                 PF01253.21    76 CUFF.54.1.p1         -            253   1.8e-05   18.2   0.3   1   2     2e-06   5.9e-05   16.5   0.2     3    52    82   132    80   177 0.88 Translation initiation factor SUI1
SUI1                 PF01253.21    76 CUFF.54.1.p1         -            253   1.8e-05   18.2   0.3   2   2         1        30   -1.8   0.0    16    38   167   188   158   189 0.69 Translation initiation factor SUI1
DUF2997              PF11211.7     47 CUFF.54.1.p1         -            253   0.00061   12.5   0.0   1   1   4.5e-05    0.0013   11.5   0.0    10    25    83    98    83   103 0.91 Protein of unknown function (DUF2997)
NEMO                 PF11577.7     68 CUFF.54.1.p1         -            253   0.00061   12.8   0.0   1   1   5.9e-05    0.0018   11.3   0.0    22    55    54    87    50    98 0.93 NF-kappa-B essential modulator NEMO
DLH                  PF01738.17   217 CUFF.18.1.p1         -            257   5.1e-11   35.4   0.0   1   1     5e-13     6e-11   35.2   0.0     3   215    41   254    39   256 0.72 Dienelactone hydrolase family
Oxidored_FMN         PF00724.19   341 CUFF.49.1.p1         -            383  1.2e-136  448.2   0.0   1   1  1.2e-138  1.4e-136  448.0   0.0     1   341     6   353     6   353 0.99 NADH:flavin oxidoreductase / NADH oxidase family
Flavodoxin_2         PF02525.16   198 CUFF.49.1.p2         -            197     3e-36  117.9   0.1   1   1   9.7e-38   3.8e-36  117.5   0.1     1   192     1   181     1   189 0.88 Flavodoxin-like fold
FMN_red              PF03358.14   155 CUFF.49.1.p2         -            197   0.00027   13.6   0.0   1   1   9.2e-05    0.0036   10.0   0.0     1    98     1    84     1    96 0.70 NADPH-dependent FMN reductase
DUF4208              PF13907.5     96 CUFF.49.1.p2         -            197     0.001   12.5   0.4   1   1   3.9e-05    0.0015   11.9   0.4    38    82    22    67    11    78 0.86 Domain of unknown function (DUF4208)
DUF999               PF06198.10   143 CUFF.5.1.p1          -            169   2.5e-94  305.8   5.8   1   1     5e-96     3e-94  305.5   5.8     1   143    21   163    21   163 0.99 Protein of unknown function (DUF999)
Oleosin              PF01277.16   113 CUFF.5.1.p1          -            169     0.046    6.4   6.6   1   3      0.41        24   -2.3   0.0    87   107    57    77    47    82 0.60 Oleosin
Oleosin              PF01277.16   113 CUFF.5.1.p1          -            169     0.046    6.4   6.6   2   3     0.091       5.4   -0.2   0.1    35    46   107   118   104   127 0.85 Oleosin
Oleosin              PF01277.16   113 CUFF.5.1.p1          -            169     0.046    6.4   6.6   3   3   0.00015    0.0087    8.8   1.0    41    63   141   163   140   167 0.86 Oleosin
Ribosomal_S6e        PF01092.18   126 CUFF.58.1.p1         -            201   5.7e-62  200.2   0.0   1   1   6.5e-64   7.7e-62  199.8   0.0     1   126    11   136    11   136 1.00 Ribosomal protein S6e
MFS_1                PF07690.15   353 CUFF.25.1.p1         -            631   1.6e-23   76.0  37.2   1   2   1.1e-18   4.4e-17   54.9  16.8     2   263    92   349    85   361 0.77 Major Facilitator Superfamily
MFS_1                PF07690.15   353 CUFF.25.1.p1         -            631   1.6e-23   76.0  37.2   2   2   4.1e-10   1.6e-08   26.7  12.4   212   353   370   516   357   516 0.76 Major Facilitator Superfamily
TRI12                PF06609.12   599 CUFF.25.1.p1         -            631   6.7e-10   30.8  27.0   1   1   3.8e-11   1.5e-09   29.7  27.0    31   494    69   553    49   575 0.69 Fungal trichothecene efflux pump (TRI12)
DUF2976              PF11190.7     88 CUFF.25.1.p1         -            631   0.00013   14.6   4.9   1   3   1.8e-05   0.00072   12.3   0.1    28    76   120   168   107   177 0.90 Protein of unknown function (DUF2976)
DUF2976              PF11190.7     88 CUFF.25.1.p1         -            631   0.00013   14.6   4.9   2   3     0.025      0.97    2.3   0.1    39    77   307   348   282   351 0.68 Protein of unknown function (DUF2976)
DUF2976              PF11190.7     88 CUFF.25.1.p1         -            631   0.00013   14.6   4.9   3   3       0.4        16   -1.6   0.1    58    75   404   421   371   425 0.73 Protein of unknown function (DUF2976)
Sugar_tr             PF00083.23   452 CUFF.24.1.p1         -            556  6.7e-113  370.7  24.1   1   1  2.1e-114  8.3e-113  370.4  24.1     2   451    10   466     9   467 0.95 Sugar (and other) transporter
MFS_1                PF07690.15   353 CUFF.24.1.p1         -            556   2.2e-20   65.7  28.3   1   2   4.1e-18   1.6e-16   53.0  19.0    23   293    47   347     6   350 0.71 Major Facilitator Superfamily
MFS_1                PF07690.15   353 CUFF.24.1.p1         -            556   2.2e-20   65.7  28.3   2   2   4.2e-10   1.6e-08   26.7  11.5     3   201   267   475   266   507 0.74 Major Facilitator Superfamily
MFS_3                PF05977.12   522 CUFF.24.1.p1         -            556    0.0027    9.0   5.5   1   1    0.0001    0.0041    8.4   5.5   258   364    60   168    49   202 0.73 Transmembrane secretion effector
Dak1                 PF02733.16   307 CUFF.19.1.p1         -            648  5.1e-110  360.0   0.4   1   1  1.9e-111  7.6e-110  359.4   0.4     2   304    75   396    74   399 0.92 Dak1 domain
Dak2                 PF02734.16   174 CUFF.19.1.p1         -            648   3.7e-45  146.9   3.1   1   2      0.66        26   -2.4   0.0    70    88   437   455   422   460 0.64 DAK2 domain
Dak2                 PF02734.16   174 CUFF.19.1.p1         -            648   3.7e-45  146.9   3.1   2   2   1.5e-46   6.1e-45  146.1   2.0     2   173   467   642   466   643 0.96 DAK2 domain
Hpt                  PF01627.22    85 CUFF.19.1.p1         -            648   0.00041   13.6   0.3   1   1   3.3e-05    0.0013   11.9   0.3    32    64   217   248   205   267 0.74 Hpt domain
Pombe_5TM            PF09437.9    256 CUFF.6.1.p1          -            317  8.2e-158  516.6  19.2   1   1  1.9e-159  1.1e-157  516.1  19.2    15   256     1   242     1   242 1.00 Pombe specific 5TM protein
Lung_7-TM_R          PF06814.12   295 CUFF.6.1.p1          -            317   6.4e-08   25.0  18.7   1   1   1.7e-09   9.9e-08   24.4  18.7    59   258    80   270    26   288 0.83 Lung seven transmembrane receptor
GLEYA                PF10528.8     91 CUFF.30.2.p1         -            249   1.2e-18   60.3   0.7   1   3      0.58        69   -3.0   0.0    59    86    20    45    14    50 0.50 GLEYA domain
GLEYA                PF10528.8     91 CUFF.30.2.p1         -            249   1.2e-18   60.3   0.7   2   3      0.28        32   -2.0   0.1    75    75    66    66    31    96 0.59 GLEYA domain
GLEYA                PF10528.8     91 CUFF.30.2.p1         -            249   1.2e-18   60.3   0.7   3   3   9.9e-21   1.2e-18   60.3   0.7     2    79   170   249   169   249 0.95 GLEYA domain
GLEYA                PF10528.8     91 CUFF.30.1.p1         -            335   5.1e-19   61.5   0.7   1   1   1.7e-20     2e-18   59.6   0.7     2    79   256   335   255   335 0.95 GLEYA domain
Asparaginase         PF00710.19   191 CUFF.15.1.p1         -            367   2.7e-54  176.5   0.6   1   1   3.1e-56   3.6e-54  176.1   0.6     1   182    47   233    47   241 0.96 Asparaginase, N-terminal
GLEYA                PF10528.8     91 CUFF.31.1.p1         -            386   5.7e-21   67.8   1.8   1   1   1.8e-22   2.1e-20   65.9   1.8     2    89   256   345   255   347 0.95 GLEYA domain
Oxidored_FMN         PF00724.19   341 CUFF.48.1.p1         -            383  1.2e-136  448.2   0.0   1   1  1.2e-138  1.4e-136  448.0   0.0     1   341     6   353     6   353 0.99 NADH:flavin oxidoreductase / NADH oxidase family
His_Phos_1           PF00300.21   194 CUFF.48.1.p2         -            220   6.5e-24   77.6   0.0   1   1     7e-26   8.2e-24   77.3   0.0     1   181     9   203     9   215 0.86 Histidine phosphatase superfamily (branch 1)
Flavodoxin_2         PF02525.16   198 CUFF.48.1.p3         -            197     3e-36  117.9   0.1   1   1   9.7e-38   3.8e-36  117.5   0.1     1   192     1   181     1   189 0.88 Flavodoxin-like fold
FMN_red              PF03358.14   155 CUFF.48.1.p3         -            197   0.00027   13.6   0.0   1   1   9.2e-05    0.0036   10.0   0.0     1    98     1    84     1    96 0.70 NADPH-dependent FMN reductase
DUF4208              PF13907.5     96 CUFF.48.1.p3         -            197     0.001   12.5   0.4   1   1   3.9e-05    0.0015   11.9   0.4    38    82    22    67    11    78 0.86 Domain of unknown function (DUF4208)
PLA2_B               PF01735.17   491 CUFF.12.1.p1         -            674  4.3e-206  677.9   1.8   1   1  8.8e-208  5.2e-206  677.6   1.8     1   490   132   614   132   615 0.99 Lysophospholipase catalytic domain
IBR                  PF01485.20    62 CUFF.12.1.p1         -            674    0.0007   12.8   2.4   1   1   2.5e-05    0.0015   11.8   2.4    10    51   569   611   561   613 0.71 IBR domain, a half RING-finger domain
CRCB                 PF02537.14    95 CUFF.14.1.p1         -            312   1.5e-32  104.7  23.7   1   3   2.5e-19   1.5e-17   56.7   7.3     3    92     8   118     6   123 0.83 CrcB-like protein, Camphor Resistance (CrcB)
CRCB                 PF02537.14    95 CUFF.14.1.p1         -            312   1.5e-32  104.7  23.7   2   3      0.66        39   -2.4   0.1    44    56   166   180   143   183 0.58 CrcB-like protein, Camphor Resistance (CrcB)
CRCB                 PF02537.14    95 CUFF.14.1.p1         -            312   1.5e-32  104.7  23.7   3   3     1e-19   5.9e-18   58.0   3.7     3    93   190   296   188   299 0.86 CrcB-like protein, Camphor Resistance (CrcB)
DUF2157              PF09925.8    147 CUFF.14.1.p1         -            312     0.028    7.1   8.8   1   2      0.11       6.4   -0.5   0.2   109   109    75    75    10   128 0.54 Predicted membrane protein (DUF2157)
DUF2157              PF09925.8    147 CUFF.14.1.p1         -            312     0.028    7.1   8.8   2   2   6.1e-05    0.0036   10.0   3.5    34   120   156   243   142   265 0.89 Predicted membrane protein (DUF2157)
DUF999               PF06198.10   143 CUFF.3.1.p1          -            289   1.2e-90  293.9   4.2   1   1   1.6e-92   1.9e-90  293.2   4.2     1   143    21   163    21   163 0.99 Protein of unknown function (DUF999)
Phosphodiest         PF01663.21   357 CUFF.53.1.p1         -            759   1.4e-16   53.9   2.6   1   2     4e-06   0.00024   13.6   0.3     1    59    48   108    48   116 0.87 Type I phosphodiesterase / nucleotide pyrophosphatase
Phosphodiest         PF01663.21   357 CUFF.53.1.p1         -            759   1.4e-16   53.9   2.6   2   2   3.2e-14   1.9e-12   40.3   0.1   143   237   166   261   117   275 0.77 Type I phosphodiesterase / nucleotide pyrophosphatase
Sulfatase            PF00884.22   309 CUFF.53.1.p1         -            759   5.4e-08   25.4   0.1   1   2   1.5e-05   0.00086   11.6   0.1     3    61    48   106    46   125 0.91 Sulfatase
Sulfatase            PF00884.22   309 CUFF.53.1.p1         -            759   5.4e-08   25.4   0.1   2   2   1.5e-05    0.0009   11.6   0.0   218   309   223   321   221   321 0.71 Sulfatase
Glyco_transf_8       PF01501.19   256 CUFF.51.1.p1         -            372   3.4e-12   39.3   1.6   1   1   3.2e-13   1.2e-11   37.5   1.6     9   221    84   321    77   336 0.81 Glycosyl transferase family 8
Mannosyl_trans3      PF11051.7    275 CUFF.51.1.p1         -            372   0.00029   13.1   1.3   1   1   1.2e-05   0.00048   12.4   1.2    92   143   171   223    85   298 0.70 Mannosyltransferase putative
Smim3                PF17307.1     60 CUFF.51.1.p1         -            372    0.0012   11.3   0.5   1   2    0.0082      0.32    3.5   0.0    12    33    11    32     2    35 0.70 Small integral membrane protein 3
Smim3                PF17307.1     60 CUFF.51.1.p1         -            372    0.0012   11.3   0.5   2   2    0.0022     0.085    5.4   0.1    42    56    88   102    85   106 0.89 Small integral membrane protein 3
Glyco_transf_34      PF05637.11   239 CUFF.51.1.p2         -            347   6.5e-87  284.1   0.3   1   1   1.4e-88   8.1e-87  283.8   0.3     2   238    98   334    97   335 0.97 galactosyl transferase GMA12/MNN10 family
Nucleotid_trans      PF03407.15   212 CUFF.51.1.p2         -            347   6.7e-05   15.8   0.0   1   1   2.1e-06   0.00012   15.0   0.0   106   189   238   318   210   333 0.81 Nucleotide-diphospho-sugar transferase
DJ-1_PfpI            PF01965.23   165 CUFF.46.1.p1         -            241     1e-15   50.8   0.0   1   1   6.4e-17   3.8e-15   49.0   0.0    12   125    30   168    26   239 0.74 DJ-1/PfpI family
ThiJ_like            PF17124.4    196 CUFF.46.1.p1         -            241   2.1e-10   33.5   0.2   1   1   8.2e-11   4.8e-09   29.1   0.2     3   160    26   169    25   185 0.78 ThiJ/PfpI family-like
Hydantoinase_B       PF02538.13   516 CUFF.42.1.p1         -            990  2.8e-213  701.8   0.3   1   1  5.9e-215  3.5e-213  701.5   0.3     1   515   459   986   459   987 0.98 Hydantoinase B/oxoprolinase
Hydantoinase_A       PF01968.17   291 CUFF.42.1.p1         -            990   9.3e-91  296.9   0.0   1   1   2.7e-92   1.6e-90  296.2   0.0    44   290     1   252     1   253 0.97 Hydantoinase/oxoprolinase
DJ-1_PfpI            PF01965.23   165 CUFF.42.1.p2         -            223   4.6e-10   32.4   0.0   1   1   1.4e-11   8.4e-10   31.6   0.0    52   161    75   215    15   219 0.78 DJ-1/PfpI family
ThiJ_like            PF17124.4    196 CUFF.42.1.p2         -            223   0.00096   11.8   0.2   1   1     3e-05    0.0018   10.9   0.2    77   169    77   164    16   190 0.77 ThiJ/PfpI family-like
TRAPP                PF04051.15   146 CUFF.55.1.p1         -            168   7.7e-26   83.5   0.2   1   1   8.5e-28     1e-25   83.1   0.2     1    99    34   142    34   163 0.88 Transport protein particle (TRAPP) component
Acetyltransf_10      PF13673.6    127 CUFF.35.1.p1         -            151   5.6e-22   71.0   0.0   1   1     5e-23   6.5e-22   70.8   0.0    32   127    50   150    28   150 0.90 Acetyltransferase (GNAT) domain
Acetyltransf_1       PF00583.24   117 CUFF.35.1.p1         -            151   6.5e-15   48.4   0.0   1   1   5.9e-16   7.7e-15   48.1   0.0    18   117    35   129    16   129 0.77 Acetyltransferase (GNAT) family
Acetyltransf_7       PF13508.6     76 CUFF.35.1.p1         -            151   5.7e-13   42.1   0.0   1   1   5.9e-14   7.7e-13   41.7   0.0     5    76    29   131    25   131 0.68 Acetyltransferase (GNAT) domain
Acetyltransf_9       PF13527.6    128 CUFF.35.1.p1         -            151   3.2e-07   23.4   0.0   1   1   8.7e-08   1.1e-06   21.6   0.0    72   127    72   131    11   132 0.71 Acetyltransferase (GNAT) domain
Acetyltransf_5       PF13444.5    101 CUFF.35.1.p1         -            151   5.7e-07   23.2   0.0   1   1   1.2e-07   1.6e-06   21.7   0.0     1    82    25   102    25   106 0.78 Acetyltransferase (GNAT) domain
Acetyltransf_15      PF17013.4    210 CUFF.35.1.p1         -            151   1.3e-06   21.0   0.1   1   1   2.8e-07   3.7e-06   19.4   0.1    28   154     5   149     1   150 0.84 Putative acetyl-transferase
FR47                 PF08445.9     86 CUFF.35.1.p1         -            151   8.4e-06   18.7   0.0   1   1   9.3e-07   1.2e-05   18.2   0.0    18    81    70   133    53   137 0.85 FR47-like protein
Acetyltransf_CG      PF14542.5     80 CUFF.35.1.p1         -            151   1.6e-05   17.9   0.0   1   1   2.3e-06   3.1e-05   17.1   0.0     8    56    57   105    50   108 0.87 GCN5-related N-acetyl-transferase
GNAT_acetyltr_2      PF13718.5    227 CUFF.35.1.p1         -            151    0.0004   12.7   0.0   1   1     4e-05   0.00053   12.3   0.0    94   131    72   109    67   130 0.79 GNAT acetyltransferase 2
Aldo_ket_red         PF00248.20   292 CUFF.17.1.p1         -            352   4.9e-69  225.5   0.0   1   1   1.9e-70   5.7e-69  225.3   0.0     1   289    21   340    21   342 0.91 Aldo/keto reductase family
HTH_29               PF13551.5     63 CUFF.17.1.p1         -            352   0.00089   12.3   0.0   1   2    0.0044      0.13    5.3   0.0    16    35   122   141   111   145 0.88 Winged helix-turn helix
HTH_29               PF13551.5     63 CUFF.17.1.p1         -            352   0.00089   12.3   0.0   2   2     0.011      0.32    4.0   0.0    10    30   278   298   271   301 0.83 Winged helix-turn helix
DsrD                 PF08679.10    64 CUFF.17.1.p1         -            352   0.00099   12.3   0.0   1   2         4   1.2e+02   -4.1   0.0    21    33   102   114    97   116 0.82 Dissimilatory sulfite reductase D (DsrD)
DsrD                 PF08679.10    64 CUFF.17.1.p1         -            352   0.00099   12.3   0.0   2   2   9.6e-05    0.0028   10.9   0.0     2    58   132   188   131   192 0.80 Dissimilatory sulfite reductase D (DsrD)
HTH_psq              PF05225.15    45 CUFF.17.1.p1         -            352    0.0012   11.5   0.3   1   3      0.01      0.31    3.8   0.0    24    33    81    90    80    93 0.91 helix-turn-helix, Psq domain
HTH_psq              PF05225.15    45 CUFF.17.1.p1         -            352    0.0012   11.5   0.3   2   3      0.66        19   -1.9   0.0     7    16   169   179   165   180 0.80 helix-turn-helix, Psq domain
HTH_psq              PF05225.15    45 CUFF.17.1.p1         -            352    0.0012   11.5   0.3   3   3    0.0086      0.25    4.1   0.0    21    33   285   297   281   304 0.87 helix-turn-helix, Psq domain
Glyco_hydro_cc       PF11790.7    239 CUFF.59.1.p1         -            531   3.6e-61  199.6   0.0   1   1   4.5e-63   5.3e-61  199.1   0.0     1   239   298   528   298   528 0.92 Glycosyl hydrolase catalytic core
Oxidored_FMN         PF00724.19   341 CUFF.52.1.p1         -            393  3.9e-138  453.2   0.0   1   1  3.8e-140  4.5e-138  453.0   0.0     1   341    12   360    12   360 0.99 NADH:flavin oxidoreductase / NADH oxidase family
Glyco_transf_34      PF05637.11   239 CUFF.52.1.p2         -            330   3.5e-86  281.7   0.0   1   1   1.1e-87   4.2e-86  281.4   0.0     2   239    84   318    83   318 0.98 galactosyl transferase GMA12/MNN10 family
DUF705               PF05152.11   304 CUFF.52.1.p2         -            330   0.00054   12.4   0.0   1   1   2.4e-05   0.00095   11.6   0.0   225   270    70   116    58   152 0.73 Protein of unknown function (DUF705)
Fig1                 PF12351.7    188 CUFF.52.1.p2         -            330   0.00096   12.0   0.1   1   1   3.7e-05    0.0015   11.4   0.1    73   147     7    79     2    95 0.75 Ca2+ regulator and membrane fusion protein Fig1
Pantoate_transf      PF02548.14   259 CUFF.52.1.p3         -            240     9e-98  319.6   0.0   1   1   1.7e-99     1e-97  319.5   0.0     2   235     6   238     5   240 0.98 Ketopantoate hydroxymethyltransferase
Asp_Glu_race         PF01177.21   224 CUFF.52.1.p3         -            240   3.8e-06   19.8   0.0   1   1   1.2e-07   7.2e-06   18.9   0.0    49    98   157   205   141   211 0.87 Asp/Glu/Hydantoin racemase
MIP                  PF00230.19   227 CUFF.20.1.p1         -            599   2.2e-51  167.6   6.0   1   1   4.9e-53   2.9e-51  167.2   6.0     6   227   308   548   303   548 0.91 Major intrinsic protein
MDM31_MDM32          PF08118.10   525 CUFF.20.1.p1         -            599    0.0012   10.4   0.1   1   1   3.3e-05     0.002    9.7   0.1   365   448   134   218   124   228 0.68 Yeast mitochondrial distribution and morphology (MDM) proteins
Dak1                 PF02733.16   307 CUFF.20.1.p2         -            204   1.7e-52  171.0   1.0   1   1   3.5e-54   2.1e-52  170.8   1.0     2   125    75   202    74   204 0.95 Dak1 domain
Usher                PF00577.19   551 CUFF.20.1.p2         -            204    0.0007   11.4   0.0   1   1   1.4e-05   0.00085   11.1   0.0    35   132    17   114     2   116 0.77 Outer membrane usher protein
#
# Program:         hmmscan
# Version:         3.3.1 (Jul 2020)
# Pipeline mode:   SCAN
# Query file:      transcripts.fasta.transdecoder_dir/longest_orfs.pep
# Target file:     mini_Pfam-A.hmm
# Option settings: hmmscan --domtblout pfam.domtblout mini_Pfam-A.hmm transcripts.fasta.transdecoder_dir/longest_orfs.pep 
# Current dir:     /home/stephan/Projects/git/TransDecoder/sample_data/cufflinks_example
# Date:            Mon Jan 25 19:01:22 2021
# [ok]