Mercurial > repos > iuc > transtermhp

changeset 1:d763e35fef0b draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transtermhp commit 4d0256dc71820b5af240f6f52ae78c9b211167f5
author iuc
date Fri, 09 Oct 2015 09:37:26 -0400
parents c28817831a24
children 1d8ad7599f02
files tool_data_table_conf.xml.sample transtermhp.xml
diffstat 2 files changed, 13 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_data_table_conf.xml.sample	Fri Oct 09 09:37:26 2015 -0400
@@ -0,0 +1,9 @@
+<!-- Use the file tool_data_table_conf.xml.oldlocstyle if you don't want to update your loc files as changed in revision 4550:535d276c92bc-->
+<tables>
+    <!-- Locations of all fasta files under genome directory -->
+    <table name="all_fasta" comment_char="#">
+        <columns>value, dbkey, name, path</columns>
+        <file path="tool-data/all_fasta.loc" />
+    </table>
+</tables>
+
--- a/transtermhp.xml	Fri Oct 09 09:22:42 2015 -0400
+++ b/transtermhp.xml	Fri Oct 09 09:37:26 2015 -0400
@@ -24,13 +24,14 @@
 > $output]]></command>
     <inputs>
       <conditional name="reference_genome">
-          <param name="source" type="select" label="Reference Genome">
+        <param name="source" type="select" label="Reference Genome">
               <option value="cached">Locally Cached</option>
               <option value="history">From History</option>
-          </param>
-          <when value="cached">
+        </param>
+        <when value="cached">
             <param name="fasta_indexes" type="select" label="Source FASTA Sequence">
                 <options from_data_table="all_fasta"/>
+                <validator type="no_options" message="A built-in reference genome is not available for the build associated with the selected input file"/>
             </param>
         </when>
         <when value="history">