Mercurial > repos > iuc > trinity_contig_exn50_statistic

diff contig_exn50_statistic.xml @ 12:34840e9c79b0 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit 33aaad8d6afce20732d8232fbcd777a3aabf09ec"
author iuc
date Fri, 10 Sep 2021 22:43:27 +0000
parents afa3a9786339
children beafdd47f8cf
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--- a/contig_exn50_statistic.xml	Fri Mar 19 21:49:29 2021 +0000
+++ b/contig_exn50_statistic.xml	Fri Sep 10 22:43:27 2021 +0000
@@ -1,12 +1,14 @@
 <tool id="trinity_contig_exn50_statistic" name="Compute contig Ex90N50 statistic and Ex90 transcript count" version="@WRAPPER_VERSION@">
     <description>from a Trinity assembly</description>
+    <expand macro="bio_tools"/>
     <macros>
         <import>macros.xml</import>
     </macros>
     <expand macro="requirements" />
     <command detect_errors="aggressive"><![CDATA[
+    ln -s '$matrix' 'matrix.tabular' &&
     contig_ExN50_statistic.pl
-        '$matrix'
+        'matrix.tabular'
         '$transcripts'
         > '$output'
     ]]></command>