Mercurial > repos > iuc > trinity_define_clusters_by_cutting_tree
diff define_clusters_by_cutting_tree.xml @ 2:cd71eff81169 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit 7efdf3224552d113a01043ee5bf4517d770df933
| author | iuc |
|---|---|
| date | Fri, 31 Mar 2017 11:36:26 -0400 |
| parents | acff96adcbec |
| children | b99f4e461291 |
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--- a/define_clusters_by_cutting_tree.xml Thu Mar 23 10:16:47 2017 -0400 +++ b/define_clusters_by_cutting_tree.xml Fri Mar 31 11:36:26 2017 -0400 @@ -4,10 +4,9 @@ <import>macros.xml</import> </macros> <expand macro="requirements"> - <requirement type="package" version="2.30.0">bioconductor-biobase</requirement> + <requirement type="package" version="2.34.0">bioconductor-biobase</requirement> </expand> - <expand macro="stdio"/> - <command><![CDATA[ + <command detect_errors="aggressive"><![CDATA[ define_clusters_by_cutting_tree.pl @@ -72,7 +71,7 @@ <element name="subcluster_1_log2_medianCentered_fpkm.matrix" compare="sim_size" file="count/define_clusters_by_cutting_tree/subcluster_1_log2_medianCentered_fpkm.matrix"/> <element name="subcluster_2_log2_medianCentered_fpkm.matrix" compare="sim_size" file="count/define_clusters_by_cutting_tree/subcluster_2_log2_medianCentered_fpkm.matrix"/> </output_collection> - <output name="rdata" delta="100" compare="sim_size" file="count/define_clusters_by_cutting_tree/my_cluster_plots.pdf"/> + <output name="cluster_plots" delta="100" compare="sim_size" file="count/define_clusters_by_cutting_tree/my_cluster_plots.pdf"/> </test> </tests> <help>