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view test-data/count/trinityStats/statsfile.txt @ 20:7c7fbf13aadd draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit c6eab3b60743dfa415dc135d657267cc8a0a31ce
author iuc
date Tue, 08 Aug 2023 09:04:29 +0000
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################################
## Counts of transcripts, etc.
################################
Total trinity 'genes':	7
Total trinity transcripts:	7
Percent GC: 42.12

########################################
Stats based on ALL transcript contigs:
########################################

	Contig N10: 541
	Contig N20: 541
	Contig N30: 380
	Contig N40: 380
	Contig N50: 279

	Median contig length: 240
	Average contig: 298.14
	Total assembled bases: 2087


#####################################################
## Stats based on ONLY LONGEST ISOFORM per 'GENE':
#####################################################

	Contig N10: 541
	Contig N20: 541
	Contig N30: 380
	Contig N40: 380
	Contig N50: 279

	Median contig length: 240
	Average contig: 298.14
	Total assembled bases: 2087