Mercurial > repos > iuc > vsearch

diff shuffling.xml @ 2:f29e21388219 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/vsearch commit 64c1c4c664c6a131d897f574dc849f5668fa97d2
author iuc
date Thu, 17 Dec 2015 12:53:39 -0500
parents fae6527990af
children 4258854759ba
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line diff
--- a/shuffling.xml	Wed Aug 26 13:34:22 2015 -0400
+++ b/shuffling.xml	Thu Dec 17 12:53:39 2015 -0500
@@ -1,4 +1,4 @@
-<tool id="vsearch_shuffling" name="VSearch shuffling" version="@VERSION@.0">
+<tool id="vsearch_shuffling" name="VSearch shuffling" version="@VERSION@.1">
     <description></description>
     <macros>
         <import>vsearch_macros.xml</import>
@@ -10,10 +10,12 @@
 <![CDATA[
     vsearch
         @GENERAL@
-        --output $outfile
-        --seed $seed
-        --shuffle $infile
-        --topn $topn
+        --output "$outfile"
+        --seed "$seed"
+        --shuffle "$infile"
+        #if str( $topn ):
+            --topn "$topn"
+        #end if
 ]]>
     </command>
     <inputs>
@@ -48,10 +50,6 @@
 
 @EXTERNAL_DOCUMENTATION@
 
--------
-
-@REFERENCES@
-
 
 ]]>
     </help>