Mercurial > repos > jackcurragh > ribogalaxy_samtools_sort_genome

changeset 2:e25b7da5ecaa draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author jackcurragh
date Tue, 07 Jun 2022 17:25:56 +0000
parents cdb826d5314b
children
files samtools_sort_genome/samtools_sort.xml
diffstat 1 files changed, 1 insertions(+), 5 deletions(-) [+]
line wrap: on
line diff
--- a/samtools_sort_genome/samtools_sort.xml	Fri May 27 10:13:32 2022 +0000
+++ b/samtools_sort_genome/samtools_sort.xml	Tue Jun 07 17:25:56 2022 +0000
@@ -1,4 +1,4 @@
-<tool id="samtools_sort" name="Samtools Sort" version="2.0.4" profile="@PROFILE@">
+<tool id="samtools_sort" name="Samtools Sort" version="2.0.5" profile="@PROFILE@">
     <description>Sort Alignment Files (SAM/BAM)</description>
     <macros>
         <import>macros.xml</import>
@@ -7,11 +7,7 @@
     <expand macro="stdio"/>
     <expand macro="version_command"/>
     <command><![CDATA[
-        @ADDTHREADS@
-	@ADDMEMORY@
         samtools sort
-            -@ \$addthreads
-            -m \$addmemory"M"
             ###if str(compression):
             ##    -l '$compression'
             ###end if