Mercurial > repos > jay > pdaug_peptide_sequence_analysis
diff PDAUG_Merge_Dataframes/PDAUG_Merge_Dataframes.py @ 0:e59674e3a391 draft
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 6f53ad797ec1af02b41510063a86bec7d121abf3"
author | jay |
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date | Fri, 20 Nov 2020 19:47:44 +0000 |
parents | |
children | b73ba641e514 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/PDAUG_Merge_Dataframes/PDAUG_Merge_Dataframes.py Fri Nov 20 19:47:44 2020 +0000 @@ -0,0 +1,28 @@ +import glob +import pandas as pd +import sys + +files = sys.argv[1] +out_file = sys.argv[2] + + +data_frame = pd.read_csv(files.split(',')[0],sep='\t') + + +for file in files.split(',')[1:]: + + df1 = pd.read_csv(file,sep='\t') + data_frame = pd.concat([data_frame,df1]) + +final_DF = data_frame.fillna(0) + +final_DF.to_csv(out_file,sep="\t", index=False) + + + + + + + + +