Mercurial > repos > jfrancoismartin > mixmodel4repeated_measures

annotate test-data/mixmodel_demo1_variables.txt @ 0:1422de181204 draft

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planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
author jfrancoismartin
date Wed, 10 Oct 2018 05:18:42 -0400
parents
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1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
1 variableMetadata withNA Shapiro.pvalue.residuals Subject.Variance REML pval_time pval_trt pval_inter pvalue.timeT1...timeT2 pvalue.timeT1...timeT3 pvalue.timeT2...timeT3 pvalue.fixfactA...fixfactB pvalue..timeT1.fixfactA...timeT2.fixfactA pvalue..timeT1.fixfactA...timeT3.fixfactA pvalue..timeT1.fixfactA...timeT1.fixfactB pvalue..timeT1.fixfactA...timeT2.fixfactB pvalue..timeT1.fixfactA...timeT3.fixfactB pvalue..timeT2.fixfactA...timeT3.fixfactA pvalue..timeT2.fixfactA...timeT1.fixfactB pvalue..timeT2.fixfactA...timeT2.fixfactB pvalue..timeT2.fixfactA...timeT3.fixfactB pvalue..timeT3.fixfactA...timeT1.fixfactB pvalue..timeT3.fixfactA...timeT2.fixfactB pvalue..timeT3.fixfactA...timeT3.fixfactB pvalue..timeT1.fixfactB...timeT2.fixfactB pvalue..timeT1.fixfactB...timeT3.fixfactB pvalue..timeT2.fixfactB...timeT3.fixfactB estimate.timeT1...timeT2 estimate.timeT1...timeT3 estimate.timeT2...timeT3 estimate.fixfactA...fixfactB estimate..timeT1.fixfactA...timeT2.fixfactA estimate..timeT1.fixfactA...timeT3.fixfactA estimate..timeT1.fixfactA...timeT1.fixfactB estimate..timeT1.fixfactA...timeT2.fixfactB estimate..timeT1.fixfactA...timeT3.fixfactB estimate..timeT2.fixfactA...timeT3.fixfactA estimate..timeT2.fixfactA...timeT1.fixfactB estimate..timeT2.fixfactA...timeT2.fixfactB estimate..timeT2.fixfactA...timeT3.fixfactB estimate..timeT3.fixfactA...timeT1.fixfactB estimate..timeT3.fixfactA...timeT2.fixfactB estimate..timeT3.fixfactA...timeT3.fixfactB estimate..timeT1.fixfactB...timeT2.fixfactB estimate..timeT1.fixfactB...timeT3.fixfactB estimate..timeT2.fixfactB...timeT3.fixfactB
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
2 var1 0 0.00152990892918407 0 254.537609570589 0.989895720028428 0.000138446468356235 0.999849571595415 NA NA NA 0.000138448022388127 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 -575.690811941667 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
3 var2 0 0.960464619805585 0 262.571810056621 0.448325032764408 0.602586916593328 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
4 var3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
5 var4 0 0.0441977246388017 7213.02082711591 254.223292186154 0.983047523518005 0.0690465434631971 0.862142650192906 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
6 var5 0 0.064287156921339 17220.7805833911 266.097162357616 0.983047523518005 0.850320276396892 0.877942440820325 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
7 var6 0 0.0381978835199867 0 244.361560756404 0.983047523518005 0.0000168443985191467 0.877942440820325 NA NA NA 0.0000168442499891452 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 -535.434188801917 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
8 var7 0 0.193737436286724 0 254.906518619133 0.0156061251704555 0.293289541312568 0.877942440820325 0.0118965177919926 0.0269815160377476 0.977421297378864 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -453.53785986075 -432.3569423245 21.18091753625 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
9 var8 0 0.014695144502403 15197.0828494013 259.222125604721 1 0.0697161146068648 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
10 var9 0 0.148540192056018 0.00000000018132043075478 259.983587153763 0.983047523518005 0.818083737709546 0.862142650192906 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
11 var10 0 0.768501224171673 4386.50412060244 262.180681429873 0.983047523518005 0.372676427326723 0.862142650192906 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
12 var11 0 0.711106348589254 19233.8026294981 260.769418500537 0.983047523518005 0.819711630041906 0.877942440820325 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
13 var12 0 0.388310543095299 0 254.652163866062 0.000464327919921784 1 0.862142650192906 0.00237921060351957 0.90841262671406 0.000434791514257952 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 553.830311730375 -128.310054849999 -682.140366580375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
14 var13 0 0.846722054364422 0 263.195387302844 0.983047523518005 0.10284211352158 0.862142650192906 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
15 var14 0 0.0360856422369758 0 255.35073473538 0.0804717081264756 1 0.877942440820325 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
16 var15 0 0.0626184338173826 8153.26008240148 262.067244816087 0.983047523518005 0.592583606736207 0.862142650192906 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
17 var16 0 0.171687740370142 10568.0720173727 237.006726048068 0.0000604559603062954 0.372676427326723 0.862142650192906 0.0000143686244382967 0.00841082627257787 0.00921196337149363 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 563.485340642249 294.939479101249 -268.545861541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
18 var17 0 0.746933462377266 23409.8484229528 266.135923308681 0.983047523518005 0.46568888380733 0.877942440820325 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
19 var18 0 0.735764575145315 0 262.073544952402 0.983047523518005 0.71138248160657 0.924943894585718 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
20 var19 0 0.194540582137284 0 268.220382686494 0.983047523518005 0.477011066880217 0.877942440820325 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
21 var20 0 0.287706917791718 0 266.878020990071 0.983047523518005 0.286161368832769 0.877942440820325 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
22 var21 0 0.0515625925674887 21271.8195701478 265.151387312325 0.983047523518005 0.71138248160657 0.924943894585718 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
23 var22 0 0.607405931022872 0 263.535518930099 0.983047523518005 0.569060445862623 0.862142650192906 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
24 var23 0 0.212615804058253 0 263.751117472845 0.983047523518005 0.644748172383697 0.924943894585718 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
25 var24 0 0.453100802782389 29510.6568674354 260.71769299974 0.989895720028428 0.853217576536927 0.862142650192906 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
26 var25 0 0.511477701192744 0 286.65672225126 0.983047523518005 0.286161368832769 0.877942440820325 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
27 var26 0 0.815661522629652 0 281.509414777202 0.983047523518005 0.0690465434631971 0.877942440820325 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
28 var27 0 0.653920548984792 0 280.838740914533 0.989895720028428 0.150203459443103 0.877942440820325 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
29 var28 0 0.719759503524831 0 277.41708583405 0.983047523518005 0.1969140094154 0.862142650192906 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
30 var29 0 0.725675776865143 86615.1480315815 268.196774164521 0.448325032764408 0.121472365285413 0.862142650192906 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
31 var30 0 0.857478473660295 37081.0431925278 286.162827544403 0.983047523518005 0.253534413626269 0.877942440820325 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
32 var31 0 0.751744017902084 0 276.362228496729 0.989895720028428 1 0.924943894585718 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
33 var32 0 0.978108618401383 0 285.72256677923 0.983047523518005 0.306152094558791 0.862142650192906 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
34 var33 0 0.99993316514364 124822.847216428 276.589351488647 0.144068402464455 0.121472365285413 0.862142650192906 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
35 var34 0 0.242528626574342 0 281.137098865892 0.983047523518005 0.1969140094154 0.877942440820325 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
36 var35 0 0.508321244841884 0 273.186257975745 0.983047523518005 0.0141111367336112 0.924943894585718 NA NA NA 0.0141114522811781 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 -603.435761166334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
37 var36 0 0.316164521545131 0.0000000010285854101153 268.90084474405 0.983047523518005 0.644748172383697 0.862142650192906 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
38 var37 0 0.953719843399109 20144.5877011241 271.448160048801 0.806157065268918 0.356762591033804 0.862142650192906 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
39 var38 0 0.428134779270157 0 285.508280238472 0.989895720028428 0.592583606736207 0.924943894585718 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
40 var39 0 0.868929253676507 74721.1043100503 271.9525623048 0.983047523518005 0.569060445862623 0.924943894585718 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1422de181204 planemo upload for repository https://github.com/workflow4metabolomics/mixmodel4repeated_measures commit 6ea32b3182383c19e5333201d2385a61d8da3d50
jfrancoismartin
parents:
diff changeset
41 var40 0 0.967902408294312 97407.8193511745 276.870664881354 0.983047523518005 0.121472365285413 0.877942440820325 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0