Mercurial > repos > jjkoehorst > sapp

annotate enzdp.xml @ 35:fa736576c7ed draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload commit 16d0bc526ad02361a7c13231d4c50479c42d8d0f-dirty
author jjkoehorst
date Mon, 04 Jul 2016 10:37:59 -0400
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
35
fa736576c7ed planemo upload commit 16d0bc526ad02361a7c13231d4c50479c42d8d0f-dirty
jjkoehorst
parents:
diff changeset
1 <tool id="DEnzDP" name="EnzDP - Enzyme prediction" version="1.0.0">
fa736576c7ed planemo upload commit 16d0bc526ad02361a7c13231d4c50479c42d8d0f-dirty
jjkoehorst
parents:
diff changeset
2 <description/>
fa736576c7ed planemo upload commit 16d0bc526ad02361a7c13231d4c50479c42d8d0f-dirty
jjkoehorst
parents:
diff changeset
3 <requirements>
fa736576c7ed planemo upload commit 16d0bc526ad02361a7c13231d4c50479c42d8d0f-dirty
jjkoehorst
parents:
diff changeset
4 <container type="docker">jjkoehorst/sappdocker:ENZDP</container>
fa736576c7ed planemo upload commit 16d0bc526ad02361a7c13231d4c50479c42d8d0f-dirty
jjkoehorst
parents:
diff changeset
5 </requirements>
fa736576c7ed planemo upload commit 16d0bc526ad02361a7c13231d4c50479c42d8d0f-dirty
jjkoehorst
parents:
diff changeset
6 <command interpreter="docker">java -jar /enzdp/enzdpRDF-0.0.1-SNAPSHOT-jar-with-dependencies.jar -input $input -output $output -format TURTLE
fa736576c7ed planemo upload commit 16d0bc526ad02361a7c13231d4c50479c42d8d0f-dirty
jjkoehorst
parents:
diff changeset
7 </command>
fa736576c7ed planemo upload commit 16d0bc526ad02361a7c13231d4c50479c42d8d0f-dirty
jjkoehorst
parents:
diff changeset
8 <inputs>
fa736576c7ed planemo upload commit 16d0bc526ad02361a7c13231d4c50479c42d8d0f-dirty
jjkoehorst
parents:
diff changeset
9 <param format="ttl" label="genome ttl with protein sequences" name="input" type="data"/>
fa736576c7ed planemo upload commit 16d0bc526ad02361a7c13231d4c50479c42d8d0f-dirty
jjkoehorst
parents:
diff changeset
10 </inputs>
fa736576c7ed planemo upload commit 16d0bc526ad02361a7c13231d4c50479c42d8d0f-dirty
jjkoehorst
parents:
diff changeset
11 <outputs>
fa736576c7ed planemo upload commit 16d0bc526ad02361a7c13231d4c50479c42d8d0f-dirty
jjkoehorst
parents:
diff changeset
12 <data format="ttl" label="ENZDP: ${input.name}" name="output"/>
fa736576c7ed planemo upload commit 16d0bc526ad02361a7c13231d4c50479c42d8d0f-dirty
jjkoehorst
parents:
diff changeset
13 </outputs>
fa736576c7ed planemo upload commit 16d0bc526ad02361a7c13231d4c50479c42d8d0f-dirty
jjkoehorst
parents:
diff changeset
14 <help/>
fa736576c7ed planemo upload commit 16d0bc526ad02361a7c13231d4c50479c42d8d0f-dirty
jjkoehorst
parents:
diff changeset
15 <citations/>
fa736576c7ed planemo upload commit 16d0bc526ad02361a7c13231d4c50479c42d8d0f-dirty
jjkoehorst
parents:
diff changeset
16 </tool>