Mercurial > repos > jjkoehorst > sapp
comparison swisscog.xml @ 35:fa736576c7ed draft
planemo upload commit 16d0bc526ad02361a7c13231d4c50479c42d8d0f-dirty
| author | jjkoehorst |
|---|---|
| date | Mon, 04 Jul 2016 10:37:59 -0400 |
| parents | |
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| 34:f2cbf1230026 | 35:fa736576c7ed |
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| 1 <tool id="DSwissCog" name="Swissprot COG annotation" version="1.0.0"> | |
| 2 <description/> | |
| 3 <requirements> | |
| 4 <container type="docker">jjkoehorst/sappdocker:SWISSCOG</container> | |
| 5 </requirements> | |
| 6 <command interpreter="docker">java -jar /swisscog/SwissCog-0.0.1-SNAPSHOT-jar-with-dependencies.jar | |
| 7 -input $input -output $output -format TURTLE | |
| 8 </command> | |
| 9 <inputs> | |
| 10 <param format="ttl" label="genome ttl with orf prediction" name="input" type="data"/> | |
| 11 </inputs> | |
| 12 <outputs> | |
| 13 <data format="ttl" label="SWISSCOG: ${input.name}" name="output"/> | |
| 14 </outputs> | |
| 15 <help/> | |
| 16 <citations/> | |
| 17 </tool> |