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diff tool_dependencies.xml @ 4:88f9e90d9d78

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Fix provided by Bjoern to tool_dependencies.xml to install correctly
author Jim Johnson <jj@umn.edu>
date Fri, 15 Aug 2014 10:11:31 -0500
parents cca0838c1597
children
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--- a/tool_dependencies.xml	Thu Jun 27 21:37:08 2013 -0500
+++ b/tool_dependencies.xml	Fri Aug 15 10:11:31 2014 -0500
@@ -5,6 +5,14 @@
             <actions>
                 <action type="download_by_url">https://cdhit.googlecode.com/files/cd-hit-v4.6.1-2012-08-27.tgz</action>
                 <action type="shell_command">make openmp=yes</action>
+                <action type="move_file">
+                     <source>cd-hit</source>
+                     <destination>$INSTALL_DIR</destination>
+                </action>
+                <action type="move_file">
+                      <source>cd-hit-est</source>
+                      <destination>$INSTALL_DIR</destination>
+                </action>
                 <action type="set_environment">
                     <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
                     <environment_variable name="CDHIT_SITE_OPTIONS" action="set_to">"-M 4000 -T 0"</environment_variable>