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changeset 5:2bb88bf1c1dd

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Add tool_data_table_conf.xml.sample
author Jim Johnson <jj@umn.edu>
date Fri, 15 Nov 2013 14:13:14 -0600
parents 57c13cd32044
children 137aab1d9ac1
files tool_data_table_conf.xml.sample
diffstat 1 files changed, 12 insertions(+), 0 deletions(-) [+]
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line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_data_table_conf.xml.sample	Fri Nov 15 14:13:14 2013 -0600
@@ -0,0 +1,12 @@
+<tables>
+    <!-- Locations of all fasta files under genome directory -->
+    <table name="all_fasta" comment_char="#">
+        <columns>value, dbkey, name, path</columns>
+        <file path="tool-data/all_fasta.loc" />
+    </table>
+    <!-- Location of SAMTools indexes and other files -->
+    <table name="sam_fa_indexes" comment_char="#">
+        <columns>line_type, value, path</columns>
+        <file path="tool-data/sam_fa_indices.loc" />
+    </table>
+</tables>