diff mothur/tools/mothur/libshuff.xml @ 25:bfbaf823be4c

Change metagenomics datatypes to include labels and groups metadata. change Mothur tool configs to get label and group select options from a data_meta filter rather than using the options from_dataset attribute. This grealty decreases memory demand for the galaxy server.

--- a/mothur/tools/mothur/libshuff.xml	Wed Mar 28 15:45:03 2012 -0500
+++ b/mothur/tools/mothur/libshuff.xml	Wed May 16 12:28:44 2012 -0500
@@ -27,10 +27,8 @@
   <param name="dist" type="data" format="lower.dist,square.dist" label="phylip - Distance Matrix"/>
   <param name="group" type="data" format="groups" label="group - Groups"/>
   <param name="groups" type="select" label="groups - Groups to condider" multiple="true">
-   <options from_dataset="group">
-    <column name="name" index="1"/>
-    <column name="value" index="1"/>
-    <filter type="unique_value" name="unq_grp" column="1" />
+   <options>
+    <filter type="data_meta" ref="group" key="groups" />
    </options>
   </param>
   <param name="iters" type="integer" value="10000" label="iters - Number of iterations to try (default 10000)"/>