diff mothur/tools/mothur/align.seqs.xml @ 1:fcc0778f6987

Migrated tool version 1.16.0 from old tool shed archive to new tool shed repository

--- a/mothur/tools/mothur/align.seqs.xml	Tue Jun 07 17:32:23 2011 -0400
+++ b/mothur/tools/mothur/align.seqs.xml	Tue Jun 07 17:35:35 2011 -0400
@@ -1,4 +1,4 @@
-<tool id="mothur_align_seqs" name="Align.seqs" version="1.15.0">
+<tool id="mothur_align_seqs" name="Align.seqs" version="1.16.0">
  <description>Align sequences to a template alignment</description>
  <command interpreter="python">
   mothur_wrapper.py 
@@ -23,6 +23,7 @@
    --flip=true
    --threshold=$reverse.threshold
   #end if
+  --processors=2
  </command>
  <inputs>
   <param name="candidate" type="data" format="fasta" label="candidate - Candiate Sequences"/>
@@ -50,7 +51,9 @@
     <option value="blast">blast</option>
    </param>
    <when value="kmer">
-    <param name="ksize" type="integer" value="8" label="ksize - kmer length between 5 and 12"/>
+    <param name="ksize" type="integer" value="8" label="ksize - kmer length between 5 and 12">
+      <validator type="in_range" message="ksize - kmer length between 5 and 12" min="5" max="12"/>
+    </param>
    </when>
    <when value="suffix"/>
    <when value="blast"/>