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Mothur - fix set_meta for SffFlow in datatypes/metagenomics.py
author Jim Johnson <jj@umn.edu>
date Fri, 09 Dec 2011 12:12:16 -0600
parents a6189f58fedb
children 09740be2bc9c
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#This is a sample file distributed with Galaxy that enables tools
#to use a directory of metagenomics files.  
#file has this format (white space characters are TAB characters):
#
# Silva reference files:    http://www.mothur.org/wiki/Silva_reference_files
#
#<taxonomyname>	<file_base>
#
archaea.gg	/project/db/galaxy/mothur/Silva.archaea/silva.archaea.gg.tax
archaea.silva	/project/db/galaxy/mothur/Silva.archaea/silva.archaea.silva.tax
archaea.rdp	/project/db/galaxy/mothur/Silva.archaea/silva.archaea.rdp.tax
archaea.ncbi	/project/db/galaxy/mothur/Silva.archaea/silva.archaea.ncbi.tax
bacteria.gg	/project/db/galaxy/mothur/silva.bacteria/silva.bacteria.gg.tax
bacteria.silva	/project/db/galaxy/mothur/silva.bacteria/silva.bacteria.silva.tax
bacteria.ncbi	/project/db/galaxy/mothur/silva.bacteria/silva.bacteria.ncbi.tax
bacteria.rdp	/project/db/galaxy/mothur/silva.bacteria/silva.bacteria.rdp.tax
bacteria.rdp6	/project/db/galaxy/mothur/silva.bacteria/silva.bacteria.rdp6.tax
eukarya.silva	/project/db/galaxy/mothur/silva.eukarya.silva.tax
eukarya.ncbi	/project/db/galaxy/mothur/silva.eukarya.ncbi.tax