log

age author description
Mon, 10 Nov 2014 15:40:02 -0500 galaxyuser Fixed reference to legacy blast repository in tool_dependencies.xml. Updated README with author information. default tip
Fri, 31 Oct 2014 15:09:32 -0400 certain cat Updated tools to use Mothur 1.33. Added some misc. fixes and updates (blast repository, tool fixes)
Mon, 22 Sep 2014 11:19:09 -0400 pjbriggs Updated tool_dependencies.xml to build mothur package on Linux (may break other OSes).
Wed, 11 Sep 2013 16:56:31 -0500 Jim Johnson mothur_wrapper.py - convert_value needs to return a String
Wed, 04 Sep 2013 10:51:34 -0500 Jim Johnson Fixes courtesy of Peter Briggs:
Tue, 30 Jul 2013 09:26:31 -0500 Jim Johnson Patches courtesy of Peter Briggs, Bioinformatics Core Facility University of Manchester
Thu, 30 May 2013 08:59:17 -0500 Jim Johnson metagenomics.py - require ref.taxonomy sniff to find at least 1 multi-level tax assignment with semicolon separators
Tue, 28 May 2013 07:43:37 -0500 Jim Johnson Fixes for metagenomics.py datatypes tahnks to Peter Briggs
Wed, 20 Feb 2013 07:51:22 -0600 Jim Johnson mothur_wrapper.py - remove type restrictions for params - was failing for chimera.slayer
Tue, 04 Dec 2012 11:05:19 -0600 Jim Johnson Update to mothur version 1.27 and add tool_dependencies.xml to automatically install mothur
Wed, 16 May 2012 13:12:05 -0500 Jim Johnson Updates for Mothur version 1.25.0 (includes changes to datatypes metagenomics.py and uses more efficient means for labels and groups options)
Wed, 16 May 2012 12:28:44 -0500 Jim Johnson Change metagenomics datatypes to include labels and groups metadata. change Mothur tool configs to get label and group select options from a data_meta filter rather than using the options from_dataset attribute. This grealty decreases memory demand for the galaxy server.
Wed, 28 Mar 2012 15:45:03 -0500 Jim Johnson Mothur - updates for Mothur version 1.24
Thu, 19 Jan 2012 11:27:37 -0600 Jim Johnson Mothur - eliminate warning message in mothur_count_groups
Thu, 19 Jan 2012 10:34:04 -0600 Jim Johnson Mothur - html escape amperand in calculator option label