diff README @ 0:bb25a4e5f211 draft default tip

"planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/netmhc commit 3bf9a39fe11622806ac6b032ba4fc6139a003580"

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+NetMHC 4.0 server predicts binding of peptides to a number of different HLA alleles using artificial neural networks (ANNs). 
+
+SEE:  http://www.cbs.dtu.dk/services/NetMHC/
+
+NetMHC is available to academic researchers.  
+The download webpage requires the user to accept a academic license aggrement, which prevents automatic Galaxy package installation.
+http://www.cbs.dtu.dk/cgi-bin/nph-sw_request?netMHC
+
+
+Download NetMHC 4.0 and install as described in:  netMHC-4.0.readme
+( Be sure to do step 3 which installs the data from: http://www.cbs.dtu.dk/services/NetMHC-4.0/data.tar.gz )
+
+
+For Galaxy installation  :  
+
+Add tool_depedencies/netMHC/4.0/env.sh
+
+The env.sh must define ENVIROMENT variables:  NMHOME and TMPDIR
+
+For example, if you installed netMHC at: /home/galaxy/src/netMHC-4.0
+
+galaxy@galaxy [/home/galaxy] % cat tool_dependencies/netMHC/4.0/env.sh 
+export NMHOME=/home/galaxy/src/netMHC-4.0
+export TMPDIR=/tmp
+export PATH=/home/galaxy/src/netMHC-4.0:$PATH
+