Mercurial > repos > jjohnson > pileup_to_vcf
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Add option to set VCF ID field value, this can be used to ID germline variants for SnpSift default tipThu, 11 Apr 2013 10:28:10 -0500, by Jim Johnson
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Add REAMDEThu, 28 Mar 2013 14:55:50 -0500, by Jim Johnson
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Fix VCF headerWed, 20 Mar 2013 07:50:38 -0500, by Jim Johnson
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Change version to: pileup_to_vcf.pyV1.1Wed, 20 Mar 2013 07:30:20 -0500, by Jim Johnson
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Fix test 2Tue, 19 Mar 2013 15:05:20 -0500, by Jim Johnson
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Fix base qualityTue, 19 Mar 2013 13:04:40 -0500, by Jim Johnson
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Reference skips have a base quality scoreTue, 19 Mar 2013 12:49:45 -0500, by Jim Johnson
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Fix read depth reportingSun, 03 Mar 2013 20:38:43 -0600, by Jim Johnson
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Handle delection char: *Mon, 18 Feb 2013 19:11:47 -0600, by Jim Johnson
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UploadedMon, 18 Feb 2013 11:32:50 -0500, by jjohnson