comparison poller_example.xml @ 0:e5c3175506b7 default tip

Initial tool configs for qiime, most need work.

0:e5c3175506b7

<tool id="poller_example" name="poller_example" version="1.2.0">
 <description>Create python file</description>
 <requirements>
  <requirement type="binary">poller_example.py</requirement>
 </requirements>
 <command interpreter="python">
  qiime_wrapper.py
  --galaxy_tmpdir='$__new_file_path__'
  poller_example.py
  --polled_dir=$polled_dir
  --poller_fp=$poller_fp
  --python_exe_fp=$python_exe_fp
  $suppress_custom_functions
 </command>
 <inputs>
  <param name="polled_dir" type="text"  label="polled_dir"
   help="path to directory to poll [REQUIRED]"/>
  <param name="poller_fp" type="data" format="txt" label="poller_fp"
   help="full path to qiime/parallel/poller.py [default: /usr/local/lib/python2.6/site-packages/scripts/poller.py]"/>
  <param name="python_exe_fp" type="data" format="txt" label="python_exe_fp"
   help="full path to python executable [default: python]"/>
  <param name="suppress_custom_functions" type="boolean" truevalue="--suppress_custom_functions" falsevalue="" checked="false" label="suppress_custom_functions"
   help="use the default functions for checking run completion, processing results, and cleaning up (these are quiet) [default: False]"/>
 </inputs>
 <outputs>
  
 </outputs>
 <tests>
 </tests>
 <help>
  
 </help>
</tool>