diff poller_example.xml @ 0:e5c3175506b7 default tip

Initial tool configs for qiime, most need work.

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/poller_example.xml	Sun Jul 17 10:30:11 2011 -0500
@@ -0,0 +1,34 @@
+<tool id="poller_example" name="poller_example" version="1.2.0">
+ <description>Create python file</description>
+ <requirements>
+  <requirement type="binary">poller_example.py</requirement>
+ </requirements>
+ <command interpreter="python">
+  qiime_wrapper.py
+  --galaxy_tmpdir='$__new_file_path__'
+  poller_example.py
+  --polled_dir=$polled_dir
+  --poller_fp=$poller_fp
+  --python_exe_fp=$python_exe_fp
+  $suppress_custom_functions
+ </command>
+ <inputs>
+  <param name="polled_dir" type="text"  label="polled_dir"
+   help="path to directory to poll [REQUIRED]"/>
+  <param name="poller_fp" type="data" format="txt" label="poller_fp"
+   help="full path to qiime/parallel/poller.py [default: /usr/local/lib/python2.6/site-packages/scripts/poller.py]"/>
+  <param name="python_exe_fp" type="data" format="txt" label="python_exe_fp"
+   help="full path to python executable [default: python]"/>
+  <param name="suppress_custom_functions" type="boolean" truevalue="--suppress_custom_functions" falsevalue="" checked="false" label="suppress_custom_functions"
+   help="use the default functions for checking run completion, processing results, and cleaning up (these are quiet) [default: False]"/>
+ </inputs>
+ <outputs>
+  
+ </outputs>
+ <tests>
+ </tests>
+ <help>
+  
+ </help>
+</tool>
+