view upgma_cluster.xml @ 0:e5c3175506b7 default tip

Initial tool configs for qiime, most need work.
author Jim Johnson <jj@umn.edu>
date Sun, 17 Jul 2011 10:30:11 -0500
parents
children
line wrap: on
line source

<tool id="upgma_cluster" name="upgma_cluster" version="1.2.0">
 <description>Build a UPGMA tree comparing samples</description>
 <requirements>
  <requirement type="binary">upgma_cluster.py</requirement>
 </requirements>
 <command interpreter="python">
  qiime_wrapper.py
  --galaxy_tmpdir='$__new_file_path__'
  upgma_cluster.py
  --input_path=$input_path
  --output_path=$output_path
 </command>
 <inputs>
  <param name="input_path" type="text"  label="input_path"
   help="input path.  directory for batch processing, filename for single file operation [REQUIRED]"/>
 </inputs>
 <outputs>
  <data format="txt" name="output_path"/>
 </outputs>
 <tests>
 </tests>
 <help>
  
 </help>
</tool>