Mercurial > repos > jjohnson > query_tabular
annotate query_tabular.xml @ 3:3e3b3c883bec draft
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 60d1a49c09f87c1c1ec6fecbe54aa226bdc695a7-dirty
author | jjohnson |
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date | Tue, 16 Feb 2016 09:34:30 -0500 |
parents | f5df461a6b90 |
children | 9d73dca48178 |
rev | line source |
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3
3e3b3c883bec
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 60d1a49c09f87c1c1ec6fecbe54aa226bdc695a7-dirty
jjohnson
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1 <tool id="query_tabular" name="Query Tabular" version="0.1.1"> |
0
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
jjohnson
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2 <description>using sqlite sql</description> |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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3 |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
jjohnson
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4 <requirements> |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
jjohnson
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5 </requirements> |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
jjohnson
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6 <stdio> |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
jjohnson
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7 <exit_code range="1:" /> |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
jjohnson
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8 </stdio> |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
jjohnson
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9 <command interpreter="python"><![CDATA[ |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
jjohnson
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10 query_tabular.py |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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11 #if $save_db |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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12 -s $sqlitedb |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
jjohnson
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13 #else |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
jjohnson
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14 -s $workdb |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
jjohnson
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15 #end if |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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16 -j $table_json |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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17 #if $sqlquery: |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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18 -Q "$query_file" |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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19 $no_header |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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20 -o $output |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
jjohnson
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21 #end if |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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22 ]]></command> |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
jjohnson
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23 <configfiles> |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
jjohnson
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24 <configfile name="query_file"> |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
jjohnson
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25 $sqlquery |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
jjohnson
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26 </configfile> |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
jjohnson
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27 <configfile name="table_json"> |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
jjohnson
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28 #import json |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
jjohnson
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29 #set $jtbldef = dict() |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
jjohnson
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30 #set $jtbls = [] |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
jjohnson
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31 #set $jtbldef['tables'] = $jtbls |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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32 #for $i,$tbl in enumerate($tables): |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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33 #set $jtbl = dict() |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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34 #set $jtbl['file_path'] = str($tbl.table) |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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35 #if $tbl.table_name |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
jjohnson
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36 #set $tname = str($tbl.table_name) |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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37 #else |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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38 #set $tname = 't' + str($i + 1) |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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39 #end if |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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40 #set $jtbl['table_name'] = $tname |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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41 #if $tbl.col_names: |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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42 #set $col_names = str($tbl.col_names) |
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3e3b3c883bec
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 60d1a49c09f87c1c1ec6fecbe54aa226bdc695a7-dirty
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43 #if $tbl.load_named_columns: |
3e3b3c883bec
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 60d1a49c09f87c1c1ec6fecbe54aa226bdc695a7-dirty
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44 #set $jtbl['load_named_columns'] = True |
3e3b3c883bec
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 60d1a49c09f87c1c1ec6fecbe54aa226bdc695a7-dirty
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45 #end if |
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926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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46 #else |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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47 #set $col_names = '' |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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48 #end if |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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49 #set $jtbl['column_names'] = $col_names |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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50 #if str($tbl.skip_lines) != '': |
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planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit eefe7cbd5c59de67db7574847bb91e4a404adc03-dirty
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51 #set $jtbl['comment_lines'] = int($tbl.skip_lines) |
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926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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52 #elif $tbl.table.metadata.comment_lines > 0: |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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53 #set $jtbl['comment_lines'] = int($tbl.table.metadata.comment_lines) |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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54 #end if |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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55 #set $jtbls += [$jtbl] |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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56 #end for |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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57 #echo $json.dumps($jtbldef) |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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58 </configfile> |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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59 </configfiles> |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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60 <inputs> |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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61 <param name="workdb" type="hidden" value="workdb.sqlite" label=""/> |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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62 <repeat name="tables" title="Add tables" min="1"> |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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63 <param name="table" type="data" format="tabular" label="Dataset"/> |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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64 <param name="table_name" type="text" value="" optional="true" label="Table name"> |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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65 <help>By default, tables will be named: t1,t2,...,tn</help> |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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66 <validator type="regex" message="Table name should start with a letter and may contain additional letters, digits, and underscores">^[A-Za-z]\w*$</validator> |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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67 </param> |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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68 <param name="col_names" type="text" value="" optional="true" label="Column names"> |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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69 <help>By default, table columns will be named: c1,c2,c3,...,cn</help> |
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3e3b3c883bec
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 60d1a49c09f87c1c1ec6fecbe54aa226bdc695a7-dirty
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70 <sanitizer sanitize="False"/> |
3e3b3c883bec
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 60d1a49c09f87c1c1ec6fecbe54aa226bdc695a7-dirty
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71 <validator type="regex" message="A List of names separated by commas: Column names should start with a letter and may contain additional letters, digits, and underscores. Otherwise, the name must be eclosed in: double quotes, back quotes, or square brackets.">^([A-Za-z]\w*|"\S+[^,"]*"|`\S+[^,`]*`|[[]\S+[^,"]*[]])?(,([A-Za-z]\w*|"\S+.*"|`\S+[^,`]*`|[[]\S+[^,"]*[]])?)*$</validator> |
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926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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72 </param> |
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3e3b3c883bec
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 60d1a49c09f87c1c1ec6fecbe54aa226bdc695a7-dirty
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73 <param name="load_named_columns" type="boolean" truevalue="load_named_columns" falsevalue="" checked="false" label="Only load named columns into database"/> |
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926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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74 <param name="skip_lines" type="integer" value="" min="0" optional="true" label="Skip lines" help="Leave blank to use the datatype comment lines metadata" /> |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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75 </repeat> |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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76 <param name="sqlquery" type="text" area="true" size="10x80" value="" optional="true" label="SQL Query"> |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
jjohnson
parents:
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77 <help>By default, tables will be named: t1,t2,...,tn</help> |
926c62f7fa09
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/query_tabular commit 9ae87502ea7c3da33ecc453872c4eb2f41ecea4a-dirty
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78 <sanitizer sanitize="False"/> |
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79 <validator type="regex" message="">^(?im)\s*select\s+.*\s+from\s+.*$</validator> |
0
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80 </param> |
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81 <param name="no_header" type="boolean" truevalue="-n" falsevalue="" checked="False" label="Omit column headers"/> |
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82 |
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83 <param name="save_db" type="boolean" truevalue="yes" falsevalue="no" checked="false" label="Save the sqlite database"/> |
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84 </inputs> |
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85 <outputs> |
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86 <data format="sqlite" name="sqlitedb" label="sqlite db of ${on_string}"> |
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87 <filter>save_db or not (sqlquery and len(sqlquery) > 0)</filter> |
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88 </data> |
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89 <data format="tabular" name="output" label="query results on ${on_string}"> |
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90 <filter>sqlquery and len(sqlquery) > 0</filter> |
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91 </data> |
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92 </outputs> |
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93 <tests> |
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94 |
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95 <test> |
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96 <repeat name="tables"> |
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97 <param name="table" ftype="tabular" value="customers.tsv"/> |
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98 <param name="table_name" value="customers"/> |
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99 <param name="col_names" value="CustomerID,FirstName,LastName,Email,DOB,Phone"/> |
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100 </repeat> |
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101 <repeat name="tables"> |
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102 <param name="table" ftype="tabular" value="sales.tsv"/> |
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103 <param name="table_name" value="sales"/> |
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104 <param name="col_names" value="CustomerID,Date,SaleAmount"/> |
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105 </repeat> |
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106 <param name="sqlquery" value="SELECT FirstName,LastName,sum(SaleAmount) as "TotalSales" FROM customers join sales on customers.CustomerID = sales.CustomerID GROUP BY customers.CustomerID ORDER BY TotalSales DESC"/> |
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107 <output name="output" file="sales_results.tsv"/> |
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108 </test> |
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109 |
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110 <test> |
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111 <repeat name="tables"> |
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112 <param name="table" ftype="tabular" value="customers.tsv"/> |
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113 <param name="col_names" value=",FirstName,LastName,,DOB,"/> |
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114 </repeat> |
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115 <repeat name="tables"> |
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116 <param name="table" ftype="tabular" value="sales.tsv"/> |
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117 </repeat> |
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118 <param name="sqlquery" value="SELECT FirstName,LastName,sum(t2.c3) as "TotalSales" FROM t1 join t2 on t1.c1 = t2.c1 GROUP BY t1.c1 ORDER BY TotalSales DESC;"/> |
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119 <output name="output" file="sales_results.tsv"/> |
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120 </test> |
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121 |
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122 <test> |
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123 <repeat name="tables"> |
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124 <param name="table" ftype="tabular" value="customers.tsv"/> |
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125 <param name="col_names" value=",FirstName,LastName,,BirthDate,"/> |
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126 </repeat> |
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127 <param name="sqlquery" value="select FirstName,LastName,re_sub('^\d{2}(\d{2})-(\d\d)-(\d\d)','\3/\2/\1',BirthDate) as "DOB" from t1 WHERE re_search('[hp]er',c4)"/> |
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128 <output name="output" file="regex_results.tsv"/> |
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129 </test> |
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130 |
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131 <test> |
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132 <repeat name="tables"> |
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133 <param name="table" ftype="tabular" value="IEDB.tsv"/> |
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134 <param name="table_name" value="iedb"/> |
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135 <param name="col_names" value="ID,allele,seq_num,start,end,length,peptide,method,percentile_rank,ann_ic50,ann_rank,smm_ic50,smm_rank,comblib_sidney2008_score,comblib_sidney2008_rank,netmhcpan_ic50,netmhcpan_rank"/> |
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136 </repeat> |
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137 <repeat name="tables"> |
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138 <param name="table" ftype="tabular" value="netMHC_summary.tsv"/> |
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139 <param name="table_name" value="mhc_summary"/> |
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140 <param name="col_names" value="pos,peptide,logscore,affinity,Bind_Level,Protein,Allele"/> |
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141 </repeat> |
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142 <param name="sqlquery" value="select iedb.ID,iedb.peptide,iedb.start,iedb.end,iedb.percentile_rank,mhc_summary.logscore,mhc_summary.affinity,mhc_summary.Bind_Level from iedb left outer join mhc_summary on iedb.peptide = mhc_summary.peptide order by affinity,Bind_Level"/> |
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143 <output name="output" file="query_results.tsv"/> |
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144 </test> |
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145 |
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146 </tests> |
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147 <help><![CDATA[ |
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148 ============= |
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149 Query Tabular |
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150 ============= |
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151 |
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152 **Inputs** |
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153 |
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154 Loads tabular datasets into a SQLite_ data base. |
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155 |
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156 **Outputs** |
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157 |
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158 The results of a SQL query are output to the history as a tabular file. |
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159 |
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160 The SQLite_ data base can also be saved and output as a dataset in the history. |
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161 |
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162 |
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163 For help in using SQLite_ see: http://www.sqlite.org/docs.html |
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164 |
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165 **NOTE:** input for SQLite dates input field must be in the format: *YYYY-MM-DD* for example: 2015-09-30 |
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166 |
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167 See: http://www.sqlite.org/lang_datefunc.html |
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168 |
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169 **Example** |
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170 |
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171 Given 2 tabular datasets: *customers* and *sales* |
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172 |
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173 Dataset *customers* |
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174 |
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175 Table name: "customers" |
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176 |
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177 Column names: "CustomerID,FirstName,LastName,Email,DOB,Phone" |
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178 |
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179 =========== ========== ========== ===================== ========== ============ |
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180 #CustomerID FirstName LastName Email DOB Phone |
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181 =========== ========== ========== ===================== ========== ============ |
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182 1 John Smith John.Smith@yahoo.com 1968-02-04 626 222-2222 |
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183 2 Steven Goldfish goldfish@fishhere.net 1974-04-04 323 455-4545 |
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184 3 Paula Brown pb@herowndomain.org 1978-05-24 416 323-3232 |
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185 4 James Smith jim@supergig.co.uk 1980-10-20 416 323-8888 |
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186 =========== ========== ========== ===================== ========== ============ |
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187 |
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188 Dataset *sales* |
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189 |
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190 Table name: "sales" |
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191 |
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192 Column names: "CustomerID,Date,SaleAmount" |
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193 |
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194 ============= ============ ============ |
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195 #CustomerID Date SaleAmount |
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196 ============= ============ ============ |
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197 2 2004-05-06 100.22 |
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198 1 2004-05-07 99.95 |
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199 3 2004-05-07 122.95 |
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200 3 2004-05-13 100.00 |
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201 4 2004-05-22 555.55 |
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202 ============= ============ ============ |
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203 |
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204 The query |
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205 |
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206 :: |
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207 |
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208 SELECT FirstName,LastName,sum(SaleAmount) as "TotalSales" |
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209 FROM customers join sales on customers.CustomerID = sales.CustomerID |
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210 GROUP BY customers.CustomerID ORDER BY TotalSales DESC; |
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211 |
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212 Produces this tabular output: |
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213 |
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214 ========== ======== ========== |
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215 #FirstName LastName TotalSales |
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216 ========== ======== ========== |
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217 James Smith 555.55 |
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218 Paula Brown 222.95 |
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219 Steven Goldfish 100.22 |
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220 John Smith 99.95 |
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221 ========== ======== ========== |
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222 |
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223 |
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224 If the optional Table name and Column names inputs are not used, the query would be: |
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225 |
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226 :: |
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227 |
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228 SELECT t1.c2 as "FirstName", t1.c3 as "LastName", sum(t2.c3) as "TotalSales" |
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229 FROM t1 join t2 on t1.c1 = t2.c1 |
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230 GROUP BY t1.c1 ORDER BY TotalSales DESC; |
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231 |
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232 You can selectively name columns, e.g. on the customers input you could just name columns 2,3, and 5: |
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233 |
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234 Column names: ,FirstName,LastName,,BirthDate |
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235 |
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236 Results in the following data base table |
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237 |
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238 =========== ========== ========== ===================== ========== ============ |
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239 #c1 FirstName LastName c4 BirthDate c6 |
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240 =========== ========== ========== ===================== ========== ============ |
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241 1 John Smith John.Smith@yahoo.com 1968-02-04 626 222-2222 |
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242 2 Steven Goldfish goldfish@fishhere.net 1974-04-04 323 455-4545 |
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243 3 Paula Brown pb@herowndomain.org 1978-05-24 416 323-3232 |
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244 4 James Smith jim@supergig.co.uk 1980-10-20 416 323-8888 |
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245 =========== ========== ========== ===================== ========== ============ |
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246 |
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247 Regular_expression_ functions are included for: |
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248 |
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249 :: |
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250 |
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251 matching: re_match('pattern',column) |
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252 |
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253 SELECT t1.FirstName, t1.LastName |
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254 FROM t1 |
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255 WHERE re_match('^.*\.(net|org)$',c4) |
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256 |
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257 Results: |
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258 |
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259 =========== ========== |
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260 #FirstName LastName |
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261 =========== ========== |
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262 Steven Goldfish |
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263 Paula Brown |
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264 =========== ========== |
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265 |
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266 |
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267 :: |
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268 |
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269 searching: re_search('pattern',column) |
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270 substituting: re_sub('pattern','replacement,column) |
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271 |
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272 SELECT t1.FirstName, t1.LastName, re_sub('^\d{2}(\d{2})-(\d\d)-(\d\d)','\3/\2/\1',BirthDate) as "DOB" |
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273 FROM t1 |
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274 WHERE re_search('[hp]er',c4) |
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275 |
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276 Results: |
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277 |
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278 =========== ========== ========== |
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279 #FirstName LastName DOB |
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280 =========== ========== ========== |
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281 Steven Goldfish 04/04/74 |
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282 Paula Brown 24/05/78 |
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283 James Smith 20/10/80 |
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284 =========== ========== ========== |
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285 |
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286 .. _Regular_expression: https://docs.python.org/release/2.7/library/re.html |
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287 .. _SQLite: http://www.sqlite.org/index.html |
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288 |
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289 ]]></help> |
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290 </tool> |