Mercurial > repos > jjohnson > samtools_filter

diff samtools_filter.xml @ 1:f2e4e81f3639

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Add tool_dependencies.xml and test-data
author Jim Johnson <jj@umn.edu>
date Mon, 01 Apr 2013 10:57:16 -0500
parents 5dcbce4f5971
children
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--- a/samtools_filter.xml	Fri Mar 30 16:36:54 2012 -0400
+++ b/samtools_filter.xml	Mon Apr 01 10:57:16 2013 -0500
@@ -1,7 +1,7 @@
-<tool id="samtools_filter" name="Filter SAM or BAM" version="1.1.0">
+<tool id="samtools_filter" name="Filter SAM or BAM" version="1.1.1">
   <description>files on FLAG MAPQ RG LN or by region</description>
   <requirements>
-    <requirement type="package">samtools</requirement>
+    <requirement type="package" version="0.1.18">samtools</requirement>
   </requirements>
   <!-- 
     samtools view [-bchuHS] [-t in.refList] [-o output] [-f reqFlag] [-F skipFlag] [-q minMapQ] [-l library] [-r readGroup] [-R rgFile] <in.bam>|<in.sam> [region1 [...]]