Mercurial > repos > jjohnson > transindel

annotate tool-data/gene_sets.loc.sample @ 2:42d0c1c21cd4 draft

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"planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/transindel commit 057ed8ab513cdb8d8b36929a82ea75f7ddc7889d-dirty"
author jjohnson
date Fri, 27 Mar 2020 12:06:25 -0400
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42d0c1c21cd4 "planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/transindel commit 057ed8ab513cdb8d8b36929a82ea75f7ddc7889d-dirty"
jjohnson
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1 # This is a sample file distributed with featureCounts that enables it and other# tools to use gene/exon annotations in the GFF/GTF format.
42d0c1c21cd4 "planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/transindel commit 057ed8ab513cdb8d8b36929a82ea75f7ddc7889d-dirty"
jjohnson
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2 #
42d0c1c21cd4 "planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/transindel commit 057ed8ab513cdb8d8b36929a82ea75f7ddc7889d-dirty"
jjohnson
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3 # The gene_sets.loc file syntax is:
42d0c1c21cd4 "planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/transindel commit 057ed8ab513cdb8d8b36929a82ea75f7ddc7889d-dirty"
jjohnson
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4 #<unique_build_id> <dbkey> <display_name> <path>
42d0c1c21cd4 "planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/transindel commit 057ed8ab513cdb8d8b36929a82ea75f7ddc7889d-dirty"
jjohnson
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5 #
42d0c1c21cd4 "planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/transindel commit 057ed8ab513cdb8d8b36929a82ea75f7ddc7889d-dirty"
jjohnson
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6 # Please ensure that the above fields are tab separated.
42d0c1c21cd4 "planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/transindel commit 057ed8ab513cdb8d8b36929a82ea75f7ddc7889d-dirty"
jjohnson
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7 #
42d0c1c21cd4 "planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/transindel commit 057ed8ab513cdb8d8b36929a82ea75f7ddc7889d-dirty"
jjohnson
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8 # In case you have TWO or MORE providers PER dbkey, the one mentioned
42d0c1c21cd4 "planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/transindel commit 057ed8ab513cdb8d8b36929a82ea75f7ddc7889d-dirty"
jjohnson
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9 # first in the file, should have the "default" priority.
42d0c1c21cd4 "planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/transindel commit 057ed8ab513cdb8d8b36929a82ea75f7ddc7889d-dirty"
jjohnson
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10 #
42d0c1c21cd4 "planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/transindel commit 057ed8ab513cdb8d8b36929a82ea75f7ddc7889d-dirty"
jjohnson
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11 #Example:
42d0c1c21cd4 "planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/transindel commit 057ed8ab513cdb8d8b36929a82ea75f7ddc7889d-dirty"
jjohnson
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12 #
42d0c1c21cd4 "planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/transindel commit 057ed8ab513cdb8d8b36929a82ea75f7ddc7889d-dirty"
jjohnson
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13 #Homo_sapiens.GRCh37.74 hg19 GRCh37 (hg19) annotation from Ensembl, release 74 /depot/data2/galaxy/hg19/gene_sets/Homo_sapiens.GRCh37.74.gtf
42d0c1c21cd4 "planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/transindel commit 057ed8ab513cdb8d8b36929a82ea75f7ddc7889d-dirty"
jjohnson
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14 #Homo_sapiens.NCBI36.54 hg18 hg18 annotation from Ensembl, release 54 /depot/data2/galaxy/hg18/gene_sets/Homo_sapiens.NCBI36.54.gtf