comparison Tryp_V.py @ 3:4432e4183ebd draft

planemo upload for repository https://github.com/johnheap/VAPPER-Galaxy

2:82770f07a036

            title,
            ha="left", va="top", wrap="True")
    col = cg.ax_col_dendrogram.get_position()
    cg.ax_col_dendrogram.set_position([col.x0, col.y0*1.08, col.width, col.height*1.1])


    legend_elements = [Patch(facecolor='orangered', label='COG Present'),
                       Patch (facecolor='skyblue', label='COG Absent'),
                       Patch(facecolor='w', label=''),
                       Patch (facecolor='b', label='Nigeria'),
                       Patch(facecolor = 'g', label='Uganda'),
                       Patch (facecolor='c', label='Gambia'),
                       Patch (facecolor='r', label='Ivory Coast'),
                       Patch(facecolor='m', label='Brazil'),
                       Patch(facecolor='k', label=name)]
    #legend_test = [[Patch(facecolor='orangered'),Patch(facecolor='r')],["test","test2"]]
    ax.legend(handles = legend_elements, bbox_to_anchor=(-0.3,1.2),loc = 'upper left')

3:4432e4183ebd

            title,
            ha="left", va="top", wrap="True")
    col = cg.ax_col_dendrogram.get_position()
    cg.ax_col_dendrogram.set_position([col.x0, col.y0*1.08, col.width, col.height*1.1])

    countryList = pd.unique(geo_df['Location'])
    colourList = pd.unique(geo_df['colour'])
    legend_elements = [Patch(facecolor='orangered', label='COG Present'),
                       Patch(facecolor='skyblue', label='COG Absent')]

    for i in range(0, len(colourList)):
        print("country = %s, colour = %s" % (countryList[i], colourList[i]))
        p = Patch(facecolor=str(colourList[i]), label=countryList[i])
        legend_elements.append(p)

    ax.legend(handles = legend_elements, bbox_to_anchor=(-0.3,1.2),loc = 'upper left')