Mercurial > repos > johnheap > vapper
diff Tryp_V.py @ 3:4432e4183ebd draft
planemo upload for repository https://github.com/johnheap/VAPPER-Galaxy
author | johnheap |
---|---|
date | Wed, 11 Jul 2018 08:58:14 -0400 |
parents | 36cb22bd911d |
children | e75a85590041 |
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--- a/Tryp_V.py Tue Jul 10 09:22:53 2018 -0400 +++ b/Tryp_V.py Wed Jul 11 08:58:14 2018 -0400 @@ -183,17 +183,16 @@ col = cg.ax_col_dendrogram.get_position() cg.ax_col_dendrogram.set_position([col.x0, col.y0*1.08, col.width, col.height*1.1]) - + countryList = pd.unique(geo_df['Location']) + colourList = pd.unique(geo_df['colour']) legend_elements = [Patch(facecolor='orangered', label='COG Present'), - Patch (facecolor='skyblue', label='COG Absent'), - Patch(facecolor='w', label=''), - Patch (facecolor='b', label='Nigeria'), - Patch(facecolor = 'g', label='Uganda'), - Patch (facecolor='c', label='Gambia'), - Patch (facecolor='r', label='Ivory Coast'), - Patch(facecolor='m', label='Brazil'), - Patch(facecolor='k', label=name)] - #legend_test = [[Patch(facecolor='orangered'),Patch(facecolor='r')],["test","test2"]] + Patch(facecolor='skyblue', label='COG Absent')] + + for i in range(0, len(colourList)): + print("country = %s, colour = %s" % (countryList[i], colourList[i])) + p = Patch(facecolor=str(colourList[i]), label=countryList[i]) + legend_elements.append(p) + ax.legend(handles = legend_elements, bbox_to_anchor=(-0.3,1.2),loc = 'upper left')