Mercurial > repos > jtilman > flexbar
changeset 14:69ddef2ec7d2
Updated help section.
| author | jtilman |
|---|---|
| date | Sat, 19 Jan 2013 16:46:20 +0100 |
| parents | 346a2b0979ea |
| children | ec08b13d6c74 |
| files | flexbar.xml |
| diffstat | 1 files changed, 11 insertions(+), 12 deletions(-) [+] |
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--- a/flexbar.xml Thu Jan 17 18:26:14 2013 +0100 +++ b/flexbar.xml Sat Jan 19 16:46:20 2013 +0100 @@ -371,11 +371,11 @@ <help> -**Flexbar description** +**Description** -Flexbar_ is a program to preprocess sequencing data. It demultiplexes barcoded runs and removes adapter sequences. Further, basic read trimming and filtering options are provided. Flexbar increases mapping rates and improves genome and transcriptome assemblies. It supports next-generation sequencing data in fasta/q and csfasta/q format from Illumina, Roche 454, and the SOLiD platform. +Flexbar is a program to preprocess sequencing data. It demultiplexes barcoded runs and removes adapter sequences. Further, basic read trimming and filtering options are provided. Flexbar increases mapping rates and improves genome and transcriptome assemblies. It supports next-generation sequencing data in fasta/q and csfasta/q format from Illumina, Roche 454, and the SOLiD platform. Flexbar is available on the project_ page. -.. _Flexbar: https://sourceforge.net/projects/flexbar +.. _project: https://sourceforge.net/projects/flexbar ------ @@ -393,19 +393,18 @@ ------ +**Documentation** + +Further documentation is available on the `manual`__ wiki page and via the command line help screen. + +.. __: http://sourceforge.net/p/flexbar/wiki + +------ + **Reference** Matthias Dodt, Johannes T. Roehr, Rina Ahmed, Christoph Dieterich: Flexbar — flexible barcode and adapter processing for next-generation sequencing platforms. Biology 2012, 1(3):895-905. ------- - -**Documentation** - -.. class:: warningmark - -Further documentation is available on the `manual`__ wiki and via the command line help screen. - -.. __: http://sourceforge.net/p/flexbar/wiki </help> </tool>